Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23140.t1 | RHN76102.1 | 87.4 | 95 | 12 | 0 | 26 | 120 | 264 | 358 | 1.40E-36 | 163.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23140.t1 | Q9XE58 | 41.9 | 117 | 61 | 1 | 32 | 141 | 360 | 476 | 1.9e-18 | 94.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23140.t1 | G7IRV1 | 87.4 | 95 | 12 | 0 | 26 | 120 | 336 | 430 | 1.0e-36 | 163.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene23140.t1 | TF | GRAS |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050766 | MS.gene23140 | 0.981148 | 6.86E-152 | -1.69E-46 |
| MS.gene050769 | MS.gene23140 | 0.907531 | 4.58E-81 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23140.t1 | MTR_2g097410 | 87.368 | 95 | 12 | 0 | 26 | 120 | 336 | 430 | 5.83e-49 | 171 |
| MS.gene23140.t1 | MTR_4g064150 | 62.667 | 75 | 28 | 0 | 40 | 114 | 340 | 414 | 1.42e-27 | 110 |
| MS.gene23140.t1 | MTR_3g087300 | 92.727 | 55 | 4 | 0 | 26 | 80 | 154 | 208 | 1.52e-27 | 105 |
| MS.gene23140.t1 | MTR_4g064160 | 56.180 | 89 | 39 | 0 | 30 | 118 | 285 | 373 | 2.44e-25 | 104 |
| MS.gene23140.t1 | MTR_4g064120 | 49.505 | 101 | 48 | 2 | 21 | 119 | 215 | 314 | 2.15e-24 | 101 |
| MS.gene23140.t1 | MTR_7g062120 | 59.211 | 76 | 31 | 0 | 43 | 118 | 354 | 429 | 1.02e-23 | 99.8 |
| MS.gene23140.t1 | MTR_4g064180 | 60.000 | 70 | 28 | 0 | 42 | 111 | 235 | 304 | 2.04e-22 | 95.9 |
| MS.gene23140.t1 | MTR_2g097390 | 49.425 | 87 | 44 | 0 | 32 | 118 | 246 | 332 | 1.23e-20 | 90.9 |
| MS.gene23140.t1 | MTR_2g097350 | 52.778 | 72 | 34 | 0 | 47 | 118 | 260 | 331 | 1.05e-19 | 88.2 |
| MS.gene23140.t1 | MTR_2g097310 | 54.930 | 71 | 29 | 1 | 51 | 118 | 259 | 329 | 1.26e-18 | 85.1 |
| MS.gene23140.t1 | MTR_2g097463 | 56.522 | 69 | 28 | 1 | 41 | 107 | 268 | 336 | 2.63e-16 | 78.2 |
| MS.gene23140.t1 | MTR_4g064200 | 56.061 | 66 | 28 | 1 | 55 | 120 | 278 | 342 | 3.61e-15 | 74.7 |
| MS.gene23140.t1 | MTR_2g026080 | 89.189 | 37 | 4 | 0 | 199 | 235 | 212 | 248 | 4.03e-15 | 74.3 |
| MS.gene23140.t1 | MTR_2g097467 | 41.322 | 121 | 58 | 6 | 15 | 124 | 236 | 354 | 7.83e-15 | 73.9 |
| MS.gene23140.t1 | MTR_4g133620 | 82.051 | 39 | 7 | 0 | 199 | 237 | 209 | 247 | 1.34e-14 | 72.8 |
| MS.gene23140.t1 | MTR_2g097473 | 41.964 | 112 | 55 | 4 | 15 | 118 | 236 | 345 | 5.86e-14 | 71.2 |
| MS.gene23140.t1 | MTR_7g051910 | 69.444 | 36 | 11 | 0 | 200 | 235 | 207 | 242 | 4.21e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23140.t1 | AT1G07530 | 54.651 | 86 | 32 | 1 | 40 | 118 | 368 | 453 | 9.95e-23 | 97.1 |
| MS.gene23140.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 119 | 206 | 2.34e-19 | 87.0 |
| MS.gene23140.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 119 | 206 | 2.34e-19 | 87.0 |
| MS.gene23140.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 283 | 370 | 2.86e-19 | 87.0 |
| MS.gene23140.t1 | AT1G07520 | 49.474 | 95 | 36 | 3 | 24 | 113 | 284 | 371 | 2.97e-19 | 87.0 |
| MS.gene23140.t1 | AT2G29060 | 51.282 | 78 | 38 | 0 | 41 | 118 | 264 | 341 | 5.20e-19 | 86.3 |
| MS.gene23140.t1 | AT2G29060 | 51.282 | 78 | 38 | 0 | 41 | 118 | 301 | 378 | 5.56e-19 | 86.3 |
| MS.gene23140.t1 | AT2G37650 | 55.714 | 70 | 31 | 0 | 49 | 118 | 335 | 404 | 3.63e-18 | 83.6 |
| MS.gene23140.t1 | AT2G37650 | 55.714 | 70 | 31 | 0 | 49 | 118 | 323 | 392 | 3.90e-18 | 83.6 |
| MS.gene23140.t1 | AT2G29065 | 57.627 | 59 | 25 | 0 | 55 | 113 | 246 | 304 | 1.17e-13 | 70.5 |
| MS.gene23140.t1 | AT3G46600 | 36.607 | 112 | 67 | 3 | 27 | 138 | 149 | 256 | 1.46e-13 | 70.1 |
| MS.gene23140.t1 | AT3G46600 | 38.144 | 97 | 59 | 1 | 42 | 138 | 193 | 288 | 2.52e-13 | 69.3 |
| MS.gene23140.t1 | AT5G59450 | 45.333 | 75 | 38 | 1 | 41 | 112 | 204 | 278 | 4.98e-13 | 68.6 |
| MS.gene23140.t1 | AT5G47530 | 57.895 | 57 | 21 | 1 | 182 | 235 | 190 | 246 | 4.91e-12 | 65.5 |
| MS.gene23140.t1 | AT3G25290 | 72.222 | 36 | 10 | 0 | 200 | 235 | 220 | 255 | 8.44e-12 | 64.7 |
| MS.gene23140.t1 | AT3G25290 | 72.222 | 36 | 10 | 0 | 200 | 235 | 220 | 255 | 8.44e-12 | 64.7 |
| MS.gene23140.t1 | AT4G17280 | 72.222 | 36 | 10 | 0 | 200 | 235 | 219 | 254 | 1.51e-11 | 63.9 |
| MS.gene23140.t1 | AT4G12980 | 69.444 | 36 | 11 | 0 | 200 | 235 | 221 | 256 | 1.86e-11 | 63.5 |
| MS.gene23140.t1 | AT5G35735 | 75.676 | 37 | 7 | 1 | 199 | 235 | 210 | 244 | 2.68e-11 | 63.2 |
| MS.gene23140.t1 | AT3G46600 | 39.506 | 81 | 48 | 1 | 58 | 138 | 1 | 80 | 5.49e-11 | 62.0 |
Find 0 sgRNAs with CRISPR-Local
Find 123 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTATACAAAAAAAAAATGAA+TGG | - | 51771:5565-5584 | MS.gene23140:intron | 15.0% |
| !! | TGAACATAAATAATTATAAC+TGG | + | 51771:6075-6094 | None:intergenic | 15.0% |
| !! | ATCAAGTTTGTAAACTATAA+TGG | - | 51771:4675-4694 | MS.gene23140:intron | 20.0% |
| !! | ATCCTTAATCAATATCAAAA+GGG | + | 51771:6339-6358 | None:intergenic | 20.0% |
| !!! | AACATTTTTAGCAAATTTTC+AGG | + | 51771:4820-4839 | None:intergenic | 20.0% |
| !!! | TAAAAATGTTCTTTGAGTTT+TGG | + | 51771:4513-4532 | None:intergenic | 20.0% |
| !!! | TAATGTTAAAACTTTTTAGC+AGG | + | 51771:4560-4579 | None:intergenic | 20.0% |
| !!! | TACTATGTTTTCCTTAATTT+TGG | - | 51771:5950-5969 | MS.gene23140:intron | 20.0% |
| !!! | TTGTATAGAATATTTTGTGT+TGG | - | 51771:5806-5825 | MS.gene23140:CDS | 20.0% |
| ! | CATCCTTAATCAATATCAAA+AGG | + | 51771:6340-6359 | None:intergenic | 25.0% |
| ! | GCTAATAAAGTTATTGCATT+TGG | - | 51771:4372-4391 | MS.gene23140:CDS | 25.0% |
| ! | GTACAGAAATTTGAATTCAT+TGG | - | 51771:4876-4895 | MS.gene23140:CDS | 25.0% |
| ! | GTCTTATAAGCTAACTTTAT+TGG | - | 51771:5377-5396 | MS.gene23140:CDS | 25.0% |
| ! | TGCATTCAACTTAAGATATT+TGG | - | 51771:5761-5780 | MS.gene23140:CDS | 25.0% |
| ! | TTTATGCATGTCAATATGAA+TGG | - | 51771:6191-6210 | MS.gene23140:intron | 25.0% |
| !! | AATTTGGATGCTTTATTAAC+AGG | - | 51771:5849-5868 | MS.gene23140:CDS | 25.0% |
| !! | ACATCAGTTTTTAACAACTT+AGG | + | 51771:4610-4629 | None:intergenic | 25.0% |
| !! | GTTAATAAAGCATCCAAATT+TGG | + | 51771:5849-5868 | None:intergenic | 25.0% |
| !! | GTTAGTTTAGACCAAAATTA+AGG | + | 51771:5964-5983 | None:intergenic | 25.0% |
| !! | TTTTCTTTTTGTAAGTTGCA+TGG | + | 51771:4902-4921 | None:intergenic | 25.0% |
| !!! | ATAGTCTTGGTTAACTTTTT+TGG | - | 51771:4774-4793 | MS.gene23140:intron | 25.0% |
| !!! | CAACCATTTTTTTTATAAGC+AGG | + | 51771:5789-5808 | None:intergenic | 25.0% |
| !!! | TAATTTTGGTCTAAACTAAC+AGG | - | 51771:5964-5983 | MS.gene23140:intron | 25.0% |
| !!! | TACCCTTTTGATATTGATTA+AGG | - | 51771:6334-6353 | MS.gene23140:intron | 25.0% |
| !!! | TAGAATATTTTGTGTTGGTT+TGG | - | 51771:5811-5830 | MS.gene23140:CDS | 25.0% |
| !!! | TGCAGGAATTTTGATAATAT+TGG | - | 51771:5439-5458 | MS.gene23140:intron | 25.0% |
| !!! | TTAATTGTTTTTCAGACTCA+TGG | - | 51771:6360-6379 | MS.gene23140:intron | 25.0% |
| !!! | TTTGTGATTTTGATTGCAAA+AGG | - | 51771:5282-5301 | MS.gene23140:intron | 25.0% |
| AAGTCACAAGTAACAACAAT+AGG | - | 51771:6123-6142 | MS.gene23140:intron | 30.0% | |
| ACATAGTAAATAAGTCAGCA+AGG | + | 51771:5938-5957 | None:intergenic | 30.0% | |
| ACTTCTATCAAAATTAGCAG+TGG | - | 51771:5490-5509 | MS.gene23140:intron | 30.0% | |
| ATGAATTGTTGAAGCAGATT+AGG | - | 51771:5104-5123 | MS.gene23140:intron | 30.0% | |
| CAAGTAACAACAATAGGTTA+TGG | - | 51771:6129-6148 | MS.gene23140:intron | 30.0% | |
| GAGCCTGCTTATAAAAAAAA+TGG | - | 51771:5783-5802 | MS.gene23140:CDS | 30.0% | |
| GCTGATTAGAATACCAAATT+TGG | - | 51771:5833-5852 | MS.gene23140:CDS | 30.0% | |
| GGCTCATTGTTACAATATAT+TGG | - | 51771:5701-5720 | MS.gene23140:CDS | 30.0% | |
| TAGTAGTTAAAGAGAAGCTT+TGG | - | 51771:4455-4474 | MS.gene23140:CDS | 30.0% | |
| TCTGATGTTTAAGAATTTGC+TGG | - | 51771:4750-4769 | MS.gene23140:intron | 30.0% | |
| TGAACTTTAACAACCTCTTA+TGG | - | 51771:5680-5699 | MS.gene23140:CDS | 30.0% | |
| TTGCTGATCAATTGAATAAC+AGG | - | 51771:5600-5619 | MS.gene23140:intron | 30.0% | |
| ! | AATCAGCACTAAACATCTTT+TGG | + | 51771:5243-5262 | None:intergenic | 30.0% |
| ! | CTGATGTAATGATAGTTTGT+TGG | - | 51771:4623-4642 | MS.gene23140:intron | 30.0% |
| ! | GGAATAGAAGTTTTACATAG+AGG | - | 51771:5621-5640 | MS.gene23140:intron | 30.0% |
| ! | TGGTAGAGTCATGATTATTT+TGG | - | 51771:4643-4662 | MS.gene23140:intron | 30.0% |
| ACATAAGGTAAAACCAAGCA+AGG | + | 51771:6470-6489 | None:intergenic | 35.0% | |
| AGTAGCTAGAATGAAAGTTG+AGG | - | 51771:5900-5919 | MS.gene23140:CDS | 35.0% | |
| GTTATTGCATTTGGCTGTAT+TGG | - | 51771:4381-4400 | MS.gene23140:CDS | 35.0% | |
| TTGTAACAATGAGCCATAAG+AGG | + | 51771:5696-5715 | None:intergenic | 35.0% | |
| ! | TAGTTAAAGAGAAGCTTTGG+AGG | - | 51771:4458-4477 | MS.gene23140:CDS | 35.0% |
| ! | TTTGATAATATTGGCAGCGT+TGG | - | 51771:5448-5467 | MS.gene23140:intron | 35.0% |
| !! | AGAATTTGCTGGTATAGTCT+TGG | - | 51771:4761-4780 | MS.gene23140:intron | 35.0% |
| !! | GTAAACTATAATGGTGCCAT+TGG | - | 51771:4684-4703 | MS.gene23140:intron | 35.0% |
| !!! | AGTGCTGATTTTGATTGTGT+AGG | - | 51771:5253-5272 | MS.gene23140:intron | 35.0% |
| AAGGTATGTTAGCATGGGTT+CGG | - | 51771:5543-5562 | MS.gene23140:CDS | 40.0% | |
| ACCTTTCAGCATCATAGAGA+TGG | + | 51771:5347-5366 | None:intergenic | 40.0% | |
| ATGCAACCAAAGTGATCCAA+TGG | + | 51771:4703-4722 | None:intergenic | 40.0% | |
| CAATAGGTTATGGTCAACAG+TGG | - | 51771:6139-6158 | MS.gene23140:intron | 40.0% | |
| CTGTGTCTGCTAATGACAAT+AGG | - | 51771:5074-5093 | MS.gene23140:intron | 40.0% | |
| GCTGATTGGCAAGTAACATA+AGG | + | 51771:6485-6504 | None:intergenic | 40.0% | |
| TCAAATATGCAGACCTTGCT+TGG | - | 51771:6454-6473 | MS.gene23140:CDS | 40.0% | |
| TCAAGCCAATCAAACTACAG+TGG | - | 51771:6010-6029 | MS.gene23140:intron | 40.0% | |
| TCCATCTCTATGATGCTGAA+AGG | - | 51771:5343-5362 | MS.gene23140:CDS | 40.0% | |
| TGAACAAAAGGATGGATCAG+TGG | - | 51771:4937-4956 | MS.gene23140:intron | 40.0% | |
| TTGGATCACTTTGGTTGCAT+AGG | - | 51771:4703-4722 | MS.gene23140:intron | 40.0% | |
| TTGTGCACACAGAACCAAAA+GGG | + | 51771:5053-5072 | None:intergenic | 40.0% | |
| TTGTGTGCTGAACAAAAGGA+TGG | - | 51771:4929-4948 | MS.gene23140:intron | 40.0% | |
| ! | GCTGAAAGGTATGTTAGCAT+GGG | - | 51771:5538-5557 | MS.gene23140:CDS | 40.0% |
| ! | TCCTTTTGTTCAGCACACAA+CGG | + | 51771:4929-4948 | None:intergenic | 40.0% |
| ! | TGCTGAAAGGTATGTTAGCA+TGG | - | 51771:5537-5556 | MS.gene23140:CDS | 40.0% |
| ! | TGTGATTGCAAGGTACTTGA+AGG | - | 51771:6428-6447 | MS.gene23140:intron | 40.0% |
| AAATGCGATTGAAGCGCACA+TGG | - | 51771:5180-5199 | MS.gene23140:intron | 45.0% | |
| ACAAAAGGATGGATCAGTGG+TGG | - | 51771:4940-4959 | MS.gene23140:intron | 45.0% | |
| ACCTTTCAGCACTACAACTG+AGG | + | 51771:5528-5547 | None:intergenic | 45.0% | |
| AGAGGGATGTTGTGGATTTG+AGG | - | 51771:5026-5045 | MS.gene23140:intron | 45.0% | |
| AGCCAATCAAACTACAGTGG+TGG | - | 51771:6013-6032 | MS.gene23140:intron | 45.0% | |
| AGGTGATGCATCAGAGAGAA+TGG | - | 51771:5144-5163 | MS.gene23140:intron | 45.0% | |
| CACCACCACTGTAGTTTGAT+TGG | + | 51771:6018-6037 | None:intergenic | 45.0% | |
| CTTGTGCACACAGAACCAAA+AGG | + | 51771:5054-5073 | None:intergenic | 45.0% | |
| GAAGAAACAAGGGAGGAAGA+GGG | - | 51771:5009-5028 | MS.gene23140:intron | 45.0% | |
| GGGTACATTGCACAAAGACA+CGG | + | 51771:6319-6338 | None:intergenic | 45.0% | |
| GGTACATTGCACAAAGACAC+GGG | + | 51771:6318-6337 | None:intergenic | 45.0% | |
| GTATGAATGTACGACTGTGC+AGG | - | 51771:5422-5441 | MS.gene23140:CDS | 45.0% | |
| TAGGTTATGGTCAACAGTGG+AGG | - | 51771:6142-6161 | MS.gene23140:intron | 45.0% | |
| TATGGTCAACAGTGGAGGTA+GGG | - | 51771:6147-6166 | MS.gene23140:intron | 45.0% | |
| TGGAGGTAGGGCTAAAGATT+AGG | - | 51771:6159-6178 | MS.gene23140:intron | 45.0% | |
| TTATGGTCAACAGTGGAGGT+AGG | - | 51771:6146-6165 | MS.gene23140:intron | 45.0% | |
| ! | AGTTACTTTCTTGCCTCAGG+GGG | - | 51771:5306-5325 | MS.gene23140:intron | 45.0% |
| ! | CAGTTACTTTCTTGCCTCAG+GGG | - | 51771:5305-5324 | MS.gene23140:intron | 45.0% |
| ! | GATGTTTTTCCTCTTGCAGC+TGG | + | 51771:5992-6011 | None:intergenic | 45.0% |
| ! | GCAGTTACTTTCTTGCCTCA+GGG | - | 51771:5304-5323 | MS.gene23140:intron | 45.0% |
| ! | TCCTCAGTTGTAGTGCTGAA+AGG | - | 51771:5524-5543 | MS.gene23140:CDS | 45.0% |
| ! | TGTGGATTTGAGGACCCTTT+TGG | - | 51771:5036-5055 | MS.gene23140:intron | 45.0% |
| !! | ACACAGGTTGGTGAACTTGA+TGG | - | 51771:4971-4990 | MS.gene23140:intron | 45.0% |
| !! | AGGAAGCATTCTTGTCCTTC+AGG | - | 51771:5124-5143 | MS.gene23140:intron | 45.0% |
| !! | AGGTTGGTGAACTTGATGGA+GGG | - | 51771:4975-4994 | MS.gene23140:intron | 45.0% |
| !! | ATGGTGCCATTGGATCACTT+TGG | - | 51771:4694-4713 | MS.gene23140:intron | 45.0% |
| !! | TGGCAGCGTTGGTAATCATT+CGG | - | 51771:5459-5478 | MS.gene23140:intron | 45.0% |
| AAGGCGCGTTCGAAGAAACA+AGG | - | 51771:4998-5017 | MS.gene23140:intron | 50.0% | |
| AGGCGCGTTCGAAGAAACAA+GGG | - | 51771:4999-5018 | MS.gene23140:intron | 50.0% | |
| CGAAGAAACAAGGGAGGAAG+AGG | - | 51771:5008-5027 | MS.gene23140:intron | 50.0% | |
| CTCTCTGATGCATCACCTGA+AGG | + | 51771:5142-5161 | None:intergenic | 50.0% | |
| CTTGCAATCACAGCTCCCAA+AGG | + | 51771:6420-6439 | None:intergenic | 50.0% | |
| GCCGTTGTGTGCTGAACAAA+AGG | - | 51771:4925-4944 | MS.gene23140:intron | 50.0% | |
| GTGGAGAGTAGAACACAGGT+TGG | - | 51771:4959-4978 | MS.gene23140:intron | 50.0% | |
| TAACAGGAACCAGCTGCAAG+AGG | - | 51771:5980-5999 | MS.gene23140:intron | 50.0% | |
| TGGTGAACTTGATGGAGGGA+AGG | - | 51771:4979-4998 | MS.gene23140:intron | 50.0% | |
| ! | AGTGCTGAATGCAGTGAGCT+GGG | - | 51771:6383-6402 | MS.gene23140:intron | 50.0% |
| ! | AGTGGTGGAGAGTAGAACAC+AGG | - | 51771:4955-4974 | MS.gene23140:intron | 50.0% |
| ! | CTTTGGGAGCTGTGATTGCA+AGG | - | 51771:6418-6437 | MS.gene23140:intron | 50.0% |
| ! | GGCAGTTACTTTCTTGCCTC+AGG | - | 51771:5303-5322 | MS.gene23140:intron | 50.0% |
| !! | CACATGGTTGGTGCTGGTAA+CGG | - | 51771:5196-5215 | MS.gene23140:intron | 50.0% |
| !! | CAGGTTGGTGAACTTGATGG+AGG | - | 51771:4974-4993 | MS.gene23140:intron | 50.0% |
| AGGGAGGAAGAGGGATGTTG+TGG | - | 51771:5018-5037 | MS.gene23140:intron | 55.0% | |
| CATACAATCTCGTCCCCCTG+AGG | + | 51771:5322-5341 | None:intergenic | 55.0% | |
| CGCGTTCGAAGAAACAAGGG+AGG | - | 51771:5002-5021 | MS.gene23140:intron | 55.0% | |
| GCGATTGAAGCGCACATGGT+TGG | - | 51771:5184-5203 | MS.gene23140:intron | 55.0% | |
| GTGCTGAATGCAGTGAGCTG+GGG | - | 51771:6384-6403 | MS.gene23140:intron | 55.0% | |
| TGCTGAATGCAGTGAGCTGG+GGG | - | 51771:6385-6404 | MS.gene23140:intron | 55.0% | |
| TGGGGGACCTTGATGCCTTT+GGG | - | 51771:6402-6421 | MS.gene23140:intron | 55.0% | |
| !! | CACAGCTCCCAAAGGCATCA+AGG | + | 51771:6412-6431 | None:intergenic | 55.0% |
| !! | GAGTGCTGAATGCAGTGAGC+TGG | - | 51771:6382-6401 | MS.gene23140:intron | 55.0% |
| CTGGGGGACCTTGATGCCTT+TGG | - | 51771:6401-6420 | MS.gene23140:intron | 60.0% | |
| ! | GAAGCGCACATGGTTGGTGC+TGG | - | 51771:5190-5209 | MS.gene23140:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51771 | gene | 4370 | 6515 | 4370 | ID=MS.gene23140 |
| 51771 | mRNA | 4370 | 6515 | 4370 | ID=MS.gene23140.t1;Parent=MS.gene23140 |
| 51771 | exon | 6441 | 6515 | 6441 | ID=MS.gene23140.t1.exon1;Parent=MS.gene23140.t1 |
| 51771 | CDS | 6441 | 6515 | 6441 | ID=cds.MS.gene23140.t1;Parent=MS.gene23140.t1 |
| 51771 | exon | 5668 | 5938 | 5668 | ID=MS.gene23140.t1.exon2;Parent=MS.gene23140.t1 |
| 51771 | CDS | 5668 | 5938 | 5668 | ID=cds.MS.gene23140.t1;Parent=MS.gene23140.t1 |
| 51771 | exon | 5521 | 5581 | 5521 | ID=MS.gene23140.t1.exon3;Parent=MS.gene23140.t1 |
| 51771 | CDS | 5521 | 5581 | 5521 | ID=cds.MS.gene23140.t1;Parent=MS.gene23140.t1 |
| 51771 | exon | 5321 | 5441 | 5321 | ID=MS.gene23140.t1.exon4;Parent=MS.gene23140.t1 |
| 51771 | CDS | 5321 | 5441 | 5321 | ID=cds.MS.gene23140.t1;Parent=MS.gene23140.t1 |
| 51771 | exon | 4834 | 4899 | 4834 | ID=MS.gene23140.t1.exon5;Parent=MS.gene23140.t1 |
| 51771 | CDS | 4834 | 4899 | 4834 | ID=cds.MS.gene23140.t1;Parent=MS.gene23140.t1 |
| 51771 | exon | 4370 | 4510 | 4370 | ID=MS.gene23140.t1.exon6;Parent=MS.gene23140.t1 |
| 51771 | CDS | 4370 | 4510 | 4370 | ID=cds.MS.gene23140.t1;Parent=MS.gene23140.t1 |
| Gene Sequence |
| Protein sequence |
