Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23326.t1 | XP_003607007.1 | 98 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 8.30E-72 | 279.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23326.t1 | Q1S053 | 98.0 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 2.0e-74 | 279.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23326.t1 | G7JIM1 | 98.0 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 6.0e-72 | 279.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene054018 | MS.gene23326 | 0.806361 | 8.54E-50 | -1.69E-46 |
| MS.gene054662 | MS.gene23326 | 0.821356 | 4.22E-53 | -1.69E-46 |
| MS.gene060291 | MS.gene23326 | 0.812448 | 4.22E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23326.t1 | MTR_4g071150 | 98.026 | 152 | 1 | 1 | 1 | 150 | 1 | 152 | 9.78e-101 | 285 |
| MS.gene23326.t1 | MTR_2g096610 | 87.333 | 150 | 17 | 1 | 1 | 150 | 1 | 148 | 4.41e-83 | 241 |
| MS.gene23326.t1 | MTR_4g064005 | 94.000 | 150 | 7 | 1 | 1 | 150 | 1 | 148 | 1.32e-82 | 239 |
| MS.gene23326.t1 | MTR_4g063410 | 94.000 | 150 | 7 | 1 | 1 | 150 | 1 | 148 | 2.70e-82 | 239 |
| MS.gene23326.t1 | MTR_2g096570 | 91.558 | 154 | 8 | 2 | 1 | 150 | 1 | 153 | 5.64e-82 | 238 |
| MS.gene23326.t1 | MTR_4g063280 | 92.424 | 132 | 9 | 1 | 20 | 150 | 14 | 145 | 2.84e-81 | 236 |
| MS.gene23326.t1 | MTR_4g064967 | 93.333 | 150 | 8 | 1 | 1 | 150 | 1 | 148 | 2.98e-80 | 234 |
| MS.gene23326.t1 | MTR_8g086640 | 96.212 | 132 | 5 | 0 | 1 | 132 | 1 | 132 | 4.27e-75 | 221 |
| MS.gene23326.t1 | MTR_7g113160 | 79.699 | 133 | 26 | 1 | 10 | 142 | 13 | 144 | 5.01e-71 | 210 |
| MS.gene23326.t1 | MTR_7g108320 | 75.000 | 128 | 26 | 3 | 4 | 130 | 6 | 128 | 7.58e-60 | 182 |
| MS.gene23326.t1 | MTR_7g114060 | 74.219 | 128 | 29 | 1 | 3 | 130 | 2 | 125 | 7.85e-60 | 182 |
| MS.gene23326.t1 | MTR_7g114040 | 74.219 | 128 | 29 | 1 | 3 | 130 | 2 | 125 | 7.85e-60 | 182 |
| MS.gene23326.t1 | MTR_7g093910 | 73.228 | 127 | 31 | 1 | 4 | 130 | 5 | 128 | 9.33e-60 | 181 |
| MS.gene23326.t1 | MTR_2g082510 | 70.543 | 129 | 38 | 0 | 11 | 139 | 3 | 131 | 3.21e-59 | 180 |
| MS.gene23326.t1 | MTR_2g082220 | 73.950 | 119 | 31 | 0 | 11 | 129 | 3 | 121 | 1.65e-57 | 176 |
| MS.gene23326.t1 | MTR_6g005150 | 62.992 | 127 | 33 | 3 | 24 | 149 | 26 | 139 | 3.16e-47 | 150 |
| MS.gene23326.t1 | MTR_4g063300 | 75.238 | 105 | 21 | 1 | 45 | 149 | 10 | 109 | 3.34e-46 | 146 |
| MS.gene23326.t1 | MTR_7g114050 | 68.644 | 118 | 22 | 3 | 17 | 130 | 10 | 116 | 2.19e-45 | 145 |
| MS.gene23326.t1 | MTR_1g011750 | 60.714 | 112 | 42 | 2 | 21 | 131 | 23 | 133 | 3.59e-36 | 121 |
| MS.gene23326.t1 | MTR_1g011850 | 60.714 | 112 | 42 | 2 | 21 | 131 | 23 | 133 | 3.59e-36 | 121 |
| MS.gene23326.t1 | MTR_1g114050 | 60.550 | 109 | 41 | 2 | 21 | 128 | 20 | 127 | 2.90e-35 | 119 |
| MS.gene23326.t1 | MTR_1g071040 | 62.500 | 104 | 37 | 2 | 26 | 128 | 28 | 130 | 1.54e-34 | 117 |
| MS.gene23326.t1 | MTR_1g069770 | 48.958 | 96 | 48 | 1 | 45 | 139 | 9 | 104 | 5.64e-25 | 92.4 |
| MS.gene23326.t1 | MTR_4g048490 | 44.762 | 105 | 29 | 2 | 24 | 128 | 26 | 101 | 1.70e-16 | 70.9 |
| MS.gene23326.t1 | MTR_7g010440 | 70.588 | 51 | 15 | 0 | 78 | 128 | 122 | 172 | 2.24e-16 | 74.3 |
| MS.gene23326.t1 | MTR_4g005910 | 74.419 | 43 | 11 | 0 | 87 | 129 | 4 | 46 | 3.21e-16 | 68.6 |
| MS.gene23326.t1 | MTR_7g027610 | 41.525 | 118 | 42 | 4 | 20 | 135 | 10 | 102 | 5.62e-15 | 67.0 |
| MS.gene23326.t1 | MTR_0653s0030 | 54.545 | 55 | 25 | 0 | 55 | 109 | 43 | 97 | 4.58e-12 | 60.5 |
| MS.gene23326.t1 | MTR_2g096590 | 70.000 | 40 | 12 | 0 | 110 | 149 | 12 | 51 | 5.34e-12 | 57.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23326.t1 | AT5G02560 | 79.739 | 153 | 28 | 1 | 1 | 150 | 1 | 153 | 1.48e-77 | 227 |
| MS.gene23326.t1 | AT5G27670 | 76.316 | 152 | 32 | 3 | 1 | 150 | 1 | 150 | 3.32e-74 | 218 |
| MS.gene23326.t1 | AT5G02560 | 68.927 | 177 | 28 | 2 | 1 | 150 | 1 | 177 | 1.06e-72 | 216 |
| MS.gene23326.t1 | AT5G59870 | 75.000 | 148 | 36 | 1 | 4 | 150 | 3 | 150 | 8.98e-72 | 212 |
| MS.gene23326.t1 | AT1G51060 | 76.667 | 120 | 28 | 0 | 11 | 130 | 3 | 122 | 9.15e-61 | 184 |
| MS.gene23326.t1 | AT4G27230 | 71.538 | 130 | 32 | 1 | 11 | 140 | 3 | 127 | 1.43e-59 | 181 |
| MS.gene23326.t1 | AT4G27230 | 71.538 | 130 | 32 | 1 | 11 | 140 | 3 | 127 | 1.43e-59 | 181 |
| MS.gene23326.t1 | AT3G20670 | 75.630 | 119 | 29 | 0 | 11 | 129 | 3 | 121 | 4.77e-59 | 179 |
| MS.gene23326.t1 | AT1G08880 | 71.654 | 127 | 33 | 1 | 7 | 130 | 2 | 128 | 3.47e-58 | 177 |
| MS.gene23326.t1 | AT5G54640 | 74.790 | 119 | 30 | 0 | 11 | 129 | 3 | 121 | 4.51e-58 | 177 |
| MS.gene23326.t1 | AT1G54690 | 72.868 | 129 | 29 | 3 | 3 | 130 | 5 | 128 | 1.19e-57 | 176 |
| MS.gene23326.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
| MS.gene23326.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
| MS.gene23326.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
| MS.gene23326.t1 | AT2G38810 | 60.714 | 112 | 42 | 2 | 21 | 131 | 25 | 135 | 6.97e-37 | 123 |
| MS.gene23326.t1 | AT1G52740 | 62.857 | 105 | 37 | 2 | 25 | 128 | 27 | 130 | 6.18e-35 | 118 |
| MS.gene23326.t1 | AT3G54560 | 60.185 | 108 | 41 | 2 | 25 | 131 | 29 | 135 | 1.25e-34 | 118 |
| MS.gene23326.t1 | AT3G54560 | 60.185 | 108 | 41 | 2 | 25 | 131 | 29 | 135 | 1.25e-34 | 118 |
| MS.gene23326.t1 | AT4G13570 | 48.913 | 92 | 45 | 2 | 32 | 122 | 28 | 118 | 1.97e-20 | 81.3 |
| MS.gene23326.t1 | AT4G13570 | 48.352 | 91 | 45 | 2 | 33 | 122 | 35 | 124 | 5.65e-20 | 80.1 |
Find 56 sgRNAs with CRISPR-Local
Find 55 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGAGACTTTCCAGCCTTCTT+TGG | 0.241789 | 4.4:+37457372 | None:intergenic |
| AATCAGATCTAAGCCTTCTT+TGG | 0.242120 | 4.4:+37457351 | None:intergenic |
| GTCTTCTTAGGCAACAGAAT+TGG | 0.279189 | 4.4:+37457423 | None:intergenic |
| TTAGCCCTTTCAGTCTTCTT+AGG | 0.279305 | 4.4:+37457411 | None:intergenic |
| CGATTCTTCCGACTGGGAAT+TGG | 0.285182 | 4.4:+37457691 | None:intergenic |
| CATTCCAAGGCATTTGTTGC+TGG | 0.294047 | 4.4:-37457526 | MS.gene23326:CDS |
| CTTGTCACCGACTTCTTCCT+TGG | 0.303917 | 4.4:+37457732 | None:intergenic |
| GGCTCCCTTCTTTGTTGTCT+TGG | 0.304409 | 4.4:+37457776 | None:intergenic |
| GAGCATATCGACCTTTCTTC+AGG | 0.357439 | 4.4:+37457661 | None:intergenic |
| TGCTGCTGAGGTTCTTGAAT+TGG | 0.361111 | 4.4:-37457586 | MS.gene23326:CDS |
| GAGCTTGGGAAGTTGCTTGC+TGG | 0.378028 | 4.4:-37457486 | MS.gene23326:CDS |
| GGCATTTGTTGCTGGCTGTT+AGG | 0.378218 | 4.4:-37457518 | MS.gene23326:CDS |
| TCTTCTTAGGCAACAGAATT+GGG | 0.398360 | 4.4:+37457424 | None:intergenic |
| GAAGGGAGCCGGTGGAAGAA+AGG | 0.417242 | 4.4:-37457763 | MS.gene23326:CDS |
| AACAGAATTGGGTTGATGTT+CGG | 0.418504 | 4.4:+37457435 | None:intergenic |
| AAGGGAGCCGGTGGAAGAAA+GGG | 0.429527 | 4.4:-37457762 | MS.gene23326:CDS |
| CAATTCCCAGTCGGAAGAAT+CGG | 0.431861 | 4.4:-37457690 | MS.gene23326:CDS |
| AGAACTGCTGCTAGGTAAAC+CGG | 0.439504 | 4.4:+37457618 | None:intergenic |
| ACCTCCTCCCTTTCTTCCAC+CGG | 0.471747 | 4.4:+37457755 | None:intergenic |
| GCGTGTCGGCACCGGTGCTC+CGG | 0.486643 | 4.4:-37457637 | MS.gene23326:CDS |
| GAATTGGAGACCGGCTCTGA+TGG | 0.486869 | 4.4:+37457707 | None:intergenic |
| TATGCTCAGCGTGTCGGCAC+CGG | 0.489995 | 4.4:-37457645 | MS.gene23326:CDS |
| TCTTGAATATCTTGCTGCTG+AGG | 0.496391 | 4.4:-37457598 | MS.gene23326:CDS |
| AAGCACCAAGACAACAAAGA+AGG | 0.501816 | 4.4:-37457781 | MS.gene23326:CDS |
| GTTAGGAATGATGAAGAGCT+TGG | 0.506747 | 4.4:-37457501 | MS.gene23326:CDS |
| AGCAAGGAACCAAAGAAGGC+TGG | 0.510603 | 4.4:-37457381 | MS.gene23326:CDS |
| GCTGAGGTTCTTGAATTGGC+AGG | 0.519701 | 4.4:-37457582 | MS.gene23326:CDS |
| CTCGTGATAACAAGAAGAAT+AGG | 0.522113 | 4.4:-37457551 | MS.gene23326:CDS |
| TTAGGAATGATGAAGAGCTT+GGG | 0.524474 | 4.4:-37457500 | MS.gene23326:CDS |
| GGCTGGAAAGTCTCCAAAGA+AGG | 0.525629 | 4.4:-37457364 | MS.gene23326:CDS |
| ACAGCCAGCAACAAATGCCT+TGG | 0.526781 | 4.4:+37457522 | None:intergenic |
| TGCTAGGTAAACCGGAGCAC+CGG | 0.537567 | 4.4:+37457626 | None:intergenic |
| ATCGGTCGATACCTGAAGAA+AGG | 0.548682 | 4.4:-37457672 | MS.gene23326:CDS |
| TATCGACCGATTCTTCCGAC+TGG | 0.549955 | 4.4:+37457684 | None:intergenic |
| TGGTAGCAAGGAACCAAAGA+AGG | 0.550474 | 4.4:-37457385 | MS.gene23326:CDS |
| TGTTGCCTAAGAAGACTGAA+AGG | 0.556495 | 4.4:-37457416 | MS.gene23326:CDS |
| AGCACCAAGACAACAAAGAA+GGG | 0.558080 | 4.4:-37457780 | MS.gene23326:CDS |
| GAAGAAAGGGAGGAGGTCCA+AGG | 0.558674 | 4.4:-37457749 | MS.gene23326:CDS |
| TCCGACTGGGAATTGGAGAC+CGG | 0.563841 | 4.4:+37457698 | None:intergenic |
| AAGAACACCACCATGAGCTA+TGG | 0.573393 | 4.4:+37457458 | None:intergenic |
| AAGACAACAAAGAAGGGAGC+CGG | 0.578427 | 4.4:-37457774 | MS.gene23326:CDS |
| GATATTCAAGAACTGCTGCT+AGG | 0.583613 | 4.4:+37457610 | None:intergenic |
| GCTGGTGTTACCATAGCTCA+TGG | 0.586669 | 4.4:-37457468 | MS.gene23326:CDS |
| GTGACAAGATCCATCAGAGC+CGG | 0.589197 | 4.4:-37457717 | MS.gene23326:CDS |
| GTTGCCTAAGAAGACTGAAA+GGG | 0.589268 | 4.4:-37457415 | MS.gene23326:CDS |
| GCCGGTGGAAGAAAGGGAGG+AGG | 0.593863 | 4.4:-37457756 | MS.gene23326:CDS |
| AAGGGCTAACACTGGTAGCA+AGG | 0.594830 | 4.4:-37457397 | MS.gene23326:CDS |
| ACAACAAAGAAGGGAGCCGG+TGG | 0.595449 | 4.4:-37457771 | MS.gene23326:CDS |
| GGAGCCGGTGGAAGAAAGGG+AGG | 0.604037 | 4.4:-37457759 | MS.gene23326:CDS |
| GGTCGATATGCTCAGCGTGT+CGG | 0.611319 | 4.4:-37457651 | MS.gene23326:CDS |
| ATCGACCGATTCTTCCGACT+GGG | 0.613102 | 4.4:+37457685 | None:intergenic |
| AGGAGGTCCAAGGAAGAAGT+CGG | 0.620460 | 4.4:-37457739 | MS.gene23326:CDS |
| GCCGGTCTCCAATTCCCAGT+CGG | 0.630576 | 4.4:-37457699 | MS.gene23326:CDS |
| AGAAGAATAGGATCATTCCA+AGG | 0.652341 | 4.4:-37457539 | MS.gene23326:CDS |
| AAGACTGAAAGGGCTAACAC+TGG | 0.665786 | 4.4:-37457405 | MS.gene23326:CDS |
| GGTGTTACCATAGCTCATGG+TGG | 0.742529 | 4.4:-37457465 | MS.gene23326:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AGAAGAATAGGATCATTCCA+AGG | - | chr4.4:37457609-37457628 | MS.gene23326:CDS | 35.0% | |
| CTCGTGATAACAAGAAGAAT+AGG | - | chr4.4:37457597-37457616 | MS.gene23326:CDS | 35.0% | |
| TCTTCTTAGGCAACAGAATT+GGG | + | chr4.4:37457727-37457746 | None:intergenic | 35.0% | |
| TTAGGAATGATGAAGAGCTT+GGG | - | chr4.4:37457648-37457667 | MS.gene23326:CDS | 35.0% | |
| !! | AACAGAATTGGGTTGATGTT+CGG | + | chr4.4:37457716-37457735 | None:intergenic | 35.0% |
| AAGCACCAAGACAACAAAGA+AGG | - | chr4.4:37457367-37457386 | MS.gene23326:CDS | 40.0% | |
| AGCACCAAGACAACAAAGAA+GGG | - | chr4.4:37457368-37457387 | MS.gene23326:CDS | 40.0% | |
| GATATTCAAGAACTGCTGCT+AGG | + | chr4.4:37457541-37457560 | None:intergenic | 40.0% | |
| GTCTTCTTAGGCAACAGAAT+TGG | + | chr4.4:37457728-37457747 | None:intergenic | 40.0% | |
| GTTAGGAATGATGAAGAGCT+TGG | - | chr4.4:37457647-37457666 | MS.gene23326:CDS | 40.0% | |
| GTTGCCTAAGAAGACTGAAA+GGG | - | chr4.4:37457733-37457752 | MS.gene23326:CDS | 40.0% | |
| TCTTGAATATCTTGCTGCTG+AGG | - | chr4.4:37457550-37457569 | MS.gene23326:CDS | 40.0% | |
| TGTTGCCTAAGAAGACTGAA+AGG | - | chr4.4:37457732-37457751 | MS.gene23326:CDS | 40.0% | |
| TTAGCCCTTTCAGTCTTCTT+AGG | + | chr4.4:37457740-37457759 | None:intergenic | 40.0% | |
| AAGAACACCACCATGAGCTA+TGG | + | chr4.4:37457693-37457712 | None:intergenic | 45.0% | |
| AAGACAACAAAGAAGGGAGC+CGG | - | chr4.4:37457374-37457393 | MS.gene23326:CDS | 45.0% | |
| AAGACTGAAAGGGCTAACAC+TGG | - | chr4.4:37457743-37457762 | MS.gene23326:CDS | 45.0% | |
| AGAACTGCTGCTAGGTAAAC+CGG | + | chr4.4:37457533-37457552 | None:intergenic | 45.0% | |
| ATCGGTCGATACCTGAAGAA+AGG | - | chr4.4:37457476-37457495 | MS.gene23326:CDS | 45.0% | |
| CAATTCCCAGTCGGAAGAAT+CGG | - | chr4.4:37457458-37457477 | MS.gene23326:CDS | 45.0% | |
| GAGCATATCGACCTTTCTTC+AGG | + | chr4.4:37457490-37457509 | None:intergenic | 45.0% | |
| TGCTGCTGAGGTTCTTGAAT+TGG | - | chr4.4:37457562-37457581 | MS.gene23326:CDS | 45.0% | |
| TGGTAGCAAGGAACCAAAGA+AGG | - | chr4.4:37457763-37457782 | MS.gene23326:CDS | 45.0% | |
| ! | CATTCCAAGGCATTTGTTGC+TGG | - | chr4.4:37457622-37457641 | MS.gene23326:CDS | 45.0% |
| AAGGGCTAACACTGGTAGCA+AGG | - | chr4.4:37457751-37457770 | MS.gene23326:CDS | 50.0% | |
| ACAGCCAGCAACAAATGCCT+TGG | + | chr4.4:37457629-37457648 | None:intergenic | 50.0% | |
| AGCAAGGAACCAAAGAAGGC+TGG | - | chr4.4:37457767-37457786 | MS.gene23326:CDS | 50.0% | |
| AGGAGGTCCAAGGAAGAAGT+CGG | - | chr4.4:37457409-37457428 | MS.gene23326:CDS | 50.0% | |
| CGATTCTTCCGACTGGGAAT+TGG | + | chr4.4:37457460-37457479 | None:intergenic | 50.0% | |
| GCTGAGGTTCTTGAATTGGC+AGG | - | chr4.4:37457566-37457585 | MS.gene23326:CDS | 50.0% | |
| GGAGACTTTCCAGCCTTCTT+TGG | + | chr4.4:37457779-37457798 | None:intergenic | 50.0% | |
| GGCTGGAAAGTCTCCAAAGA+AGG | - | chr4.4:37457784-37457803 | MS.gene23326:CDS | 50.0% | |
| GTGACAAGATCCATCAGAGC+CGG | - | chr4.4:37457431-37457450 | MS.gene23326:CDS | 50.0% | |
| ! | ATCGACCGATTCTTCCGACT+GGG | + | chr4.4:37457466-37457485 | None:intergenic | 50.0% |
| ! | GGCATTTGTTGCTGGCTGTT+AGG | - | chr4.4:37457630-37457649 | MS.gene23326:CDS | 50.0% |
| ! | GGCTCCCTTCTTTGTTGTCT+TGG | + | chr4.4:37457375-37457394 | None:intergenic | 50.0% |
| ! | GGTGTTACCATAGCTCATGG+TGG | - | chr4.4:37457683-37457702 | MS.gene23326:CDS | 50.0% |
| ! | TATCGACCGATTCTTCCGAC+TGG | + | chr4.4:37457467-37457486 | None:intergenic | 50.0% |
| !! | CTTGTCACCGACTTCTTCCT+TGG | + | chr4.4:37457419-37457438 | None:intergenic | 50.0% |
| !! | GCTGGTGTTACCATAGCTCA+TGG | - | chr4.4:37457680-37457699 | MS.gene23326:CDS | 50.0% |
| AAGGGAGCCGGTGGAAGAAA+GGG | - | chr4.4:37457386-37457405 | MS.gene23326:CDS | 55.0% | |
| ACAACAAAGAAGGGAGCCGG+TGG | - | chr4.4:37457377-37457396 | MS.gene23326:CDS | 55.0% | |
| ACCTCCTCCCTTTCTTCCAC+CGG | + | chr4.4:37457396-37457415 | None:intergenic | 55.0% | |
| GAAGAAAGGGAGGAGGTCCA+AGG | - | chr4.4:37457399-37457418 | MS.gene23326:CDS | 55.0% | |
| GAGCTTGGGAAGTTGCTTGC+TGG | - | chr4.4:37457662-37457681 | MS.gene23326:CDS | 55.0% | |
| GGTCGATATGCTCAGCGTGT+CGG | - | chr4.4:37457497-37457516 | MS.gene23326:CDS | 55.0% | |
| TCCGACTGGGAATTGGAGAC+CGG | + | chr4.4:37457453-37457472 | None:intergenic | 55.0% | |
| TGCTAGGTAAACCGGAGCAC+CGG | + | chr4.4:37457525-37457544 | None:intergenic | 55.0% | |
| ! | GAATTGGAGACCGGCTCTGA+TGG | + | chr4.4:37457444-37457463 | None:intergenic | 55.0% |
| GAAGGGAGCCGGTGGAAGAA+AGG | - | chr4.4:37457385-37457404 | MS.gene23326:CDS | 60.0% | |
| GCCGGTCTCCAATTCCCAGT+CGG | - | chr4.4:37457449-37457468 | MS.gene23326:CDS | 60.0% | |
| ! | TATGCTCAGCGTGTCGGCAC+CGG | - | chr4.4:37457503-37457522 | MS.gene23326:CDS | 60.0% |
| GCCGGTGGAAGAAAGGGAGG+AGG | - | chr4.4:37457392-37457411 | MS.gene23326:CDS | 65.0% | |
| GGAGCCGGTGGAAGAAAGGG+AGG | - | chr4.4:37457389-37457408 | MS.gene23326:CDS | 65.0% | |
| !! | GCGTGTCGGCACCGGTGCTC+CGG | - | chr4.4:37457511-37457530 | MS.gene23326:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 37457359 | 37457811 | 37457359 | ID=MS.gene23326 |
| chr4.4 | mRNA | 37457359 | 37457811 | 37457359 | ID=MS.gene23326.t1;Parent=MS.gene23326 |
| chr4.4 | exon | 37457359 | 37457811 | 37457359 | ID=MS.gene23326.t1.exon1;Parent=MS.gene23326.t1 |
| chr4.4 | CDS | 37457359 | 37457811 | 37457359 | ID=cds.MS.gene23326.t1;Parent=MS.gene23326.t1 |
| Gene Sequence |
| Protein sequence |
