Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23365.t1 | GAU32288.1 | 93.3 | 104 | 6 | 1 | 4 | 106 | 3 | 106 | 7.70E-48 | 199.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23365.t1 | O65695 | 82.4 | 108 | 16 | 2 | 1 | 106 | 1 | 107 | 3.4e-44 | 178.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23365.t1 | A0A2Z6MJJ1 | 93.3 | 104 | 6 | 1 | 4 | 106 | 3 | 106 | 5.6e-48 | 199.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene69418 | MS.gene23365 | PPI |
MS.gene23365 | MS.gene064741 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23365.t1 | MTR_4g072190 | 93.396 | 106 | 1 | 1 | 1 | 106 | 1 | 100 | 2.09e-68 | 200 |
MS.gene23365.t1 | MTR_3g117610 | 82.075 | 106 | 15 | 1 | 4 | 105 | 3 | 108 | 1.98e-61 | 183 |
MS.gene23365.t1 | MTR_5g021820 | 71.698 | 106 | 28 | 1 | 1 | 106 | 1 | 104 | 1.16e-53 | 163 |
MS.gene23365.t1 | MTR_3g113310 | 74.074 | 108 | 24 | 2 | 1 | 106 | 1 | 106 | 3.07e-52 | 159 |
MS.gene23365.t1 | MTR_8g076040 | 72.897 | 107 | 26 | 2 | 1 | 106 | 1 | 105 | 4.09e-52 | 159 |
MS.gene23365.t1 | MTR_6g077850 | 53.261 | 92 | 40 | 2 | 17 | 105 | 7 | 98 | 1.29e-29 | 102 |
MS.gene23365.t1 | MTR_4g072880 | 52.941 | 85 | 35 | 2 | 20 | 103 | 8 | 88 | 5.16e-27 | 95.5 |
MS.gene23365.t1 | MTR_4g072270 | 63.077 | 65 | 23 | 1 | 40 | 103 | 24 | 88 | 1.28e-25 | 92.0 |
MS.gene23365.t1 | MTR_4g072310 | 62.687 | 67 | 24 | 1 | 40 | 105 | 24 | 90 | 2.32e-25 | 91.3 |
MS.gene23365.t1 | MTR_4g072530 | 63.636 | 66 | 23 | 1 | 41 | 105 | 24 | 89 | 1.13e-24 | 89.4 |
MS.gene23365.t1 | MTR_4g072500 | 63.636 | 66 | 23 | 1 | 41 | 105 | 24 | 89 | 1.20e-24 | 89.4 |
MS.gene23365.t1 | MTR_4g072910 | 50.549 | 91 | 32 | 2 | 16 | 105 | 21 | 99 | 1.83e-24 | 89.4 |
MS.gene23365.t1 | MTR_4g072640 | 63.077 | 65 | 23 | 1 | 42 | 105 | 25 | 89 | 2.52e-24 | 88.6 |
MS.gene23365.t1 | MTR_4g072250 | 51.765 | 85 | 36 | 3 | 23 | 103 | 4 | 87 | 3.73e-24 | 88.2 |
MS.gene23365.t1 | MTR_4g072220 | 51.163 | 86 | 38 | 2 | 21 | 105 | 8 | 90 | 7.64e-24 | 87.4 |
MS.gene23365.t1 | MTR_4g072480 | 59.701 | 67 | 26 | 1 | 40 | 105 | 23 | 89 | 9.87e-24 | 87.0 |
MS.gene23365.t1 | MTR_4g072730 | 61.194 | 67 | 25 | 1 | 40 | 105 | 23 | 89 | 1.46e-23 | 86.7 |
MS.gene23365.t1 | MTR_4g072620 | 59.701 | 67 | 26 | 1 | 40 | 105 | 23 | 89 | 1.58e-23 | 86.7 |
MS.gene23365.t1 | MTR_4g072860 | 51.724 | 87 | 37 | 2 | 20 | 105 | 8 | 90 | 2.35e-23 | 86.3 |
MS.gene23365.t1 | MTR_4g072370 | 58.209 | 67 | 27 | 1 | 40 | 105 | 21 | 87 | 2.61e-23 | 85.9 |
MS.gene23365.t1 | MTR_4g072570 | 58.209 | 67 | 27 | 1 | 40 | 105 | 23 | 89 | 3.78e-23 | 85.9 |
MS.gene23365.t1 | MTR_5g008360 | 56.716 | 67 | 28 | 1 | 40 | 105 | 14 | 80 | 6.02e-23 | 85.1 |
MS.gene23365.t1 | MTR_4g072240 | 59.375 | 64 | 25 | 1 | 41 | 103 | 25 | 88 | 6.15e-23 | 85.1 |
MS.gene23365.t1 | MTR_4g072230 | 51.765 | 85 | 35 | 3 | 23 | 103 | 4 | 86 | 6.93e-23 | 85.1 |
MS.gene23365.t1 | MTR_5g008370 | 59.701 | 67 | 26 | 1 | 41 | 106 | 24 | 90 | 7.09e-23 | 86.3 |
MS.gene23365.t1 | MTR_4g072820 | 58.209 | 67 | 27 | 1 | 41 | 106 | 19 | 85 | 7.29e-23 | 84.7 |
MS.gene23365.t1 | MTR_4g072560 | 50.000 | 90 | 38 | 3 | 18 | 105 | 13 | 97 | 1.11e-22 | 84.7 |
MS.gene23365.t1 | MTR_4g072980 | 50.549 | 91 | 33 | 3 | 18 | 106 | 13 | 93 | 1.15e-22 | 84.7 |
MS.gene23365.t1 | MTR_4g072260 | 48.837 | 86 | 40 | 2 | 21 | 105 | 8 | 90 | 1.39e-22 | 84.3 |
MS.gene23365.t1 | MTR_3g117640 | 60.294 | 68 | 25 | 2 | 41 | 106 | 33 | 100 | 1.65e-22 | 84.3 |
MS.gene23365.t1 | MTR_3g084150 | 56.923 | 65 | 27 | 1 | 40 | 103 | 23 | 87 | 2.19e-22 | 84.0 |
MS.gene23365.t1 | MTR_4g072660 | 60.000 | 65 | 25 | 1 | 40 | 103 | 18 | 82 | 2.28e-22 | 83.6 |
MS.gene23365.t1 | MTR_3g084180 | 56.923 | 65 | 27 | 1 | 40 | 103 | 23 | 87 | 2.76e-22 | 83.6 |
MS.gene23365.t1 | MTR_3g084210 | 59.701 | 67 | 26 | 1 | 40 | 105 | 23 | 89 | 3.36e-22 | 83.2 |
MS.gene23365.t1 | MTR_3g084250 | 58.209 | 67 | 27 | 1 | 40 | 105 | 23 | 89 | 3.39e-22 | 83.2 |
MS.gene23365.t1 | MTR_3g084240 | 47.619 | 84 | 41 | 2 | 23 | 103 | 4 | 87 | 3.43e-22 | 83.2 |
MS.gene23365.t1 | MTR_4g072890 | 48.837 | 86 | 40 | 2 | 21 | 105 | 8 | 90 | 3.60e-22 | 83.2 |
MS.gene23365.t1 | MTR_4g072330 | 56.061 | 66 | 28 | 1 | 41 | 105 | 22 | 87 | 4.71e-22 | 82.8 |
MS.gene23365.t1 | MTR_8g461410 | 55.385 | 65 | 28 | 1 | 40 | 103 | 23 | 87 | 4.76e-22 | 82.8 |
MS.gene23365.t1 | MTR_4g072540 | 56.923 | 65 | 27 | 1 | 40 | 103 | 19 | 83 | 4.87e-22 | 82.8 |
MS.gene23365.t1 | MTR_4g072850 | 58.462 | 65 | 26 | 1 | 40 | 103 | 25 | 89 | 5.02e-22 | 82.8 |
MS.gene23365.t1 | MTR_3g084170 | 58.462 | 65 | 26 | 1 | 40 | 103 | 23 | 87 | 5.14e-22 | 82.8 |
MS.gene23365.t1 | MTR_3g084220 | 58.462 | 65 | 26 | 1 | 40 | 103 | 23 | 87 | 6.53e-22 | 82.4 |
MS.gene23365.t1 | MTR_4g072870 | 45.556 | 90 | 44 | 2 | 17 | 105 | 5 | 90 | 8.08e-22 | 82.4 |
MS.gene23365.t1 | MTR_4g072300 | 56.250 | 64 | 27 | 1 | 41 | 103 | 25 | 88 | 9.22e-22 | 82.0 |
MS.gene23365.t1 | MTR_4g072680 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 1.48e-21 | 81.6 |
MS.gene23365.t1 | MTR_3g110038 | 56.923 | 65 | 27 | 1 | 40 | 103 | 23 | 87 | 1.51e-21 | 81.6 |
MS.gene23365.t1 | MTR_3g117630 | 58.462 | 65 | 26 | 1 | 40 | 103 | 23 | 87 | 2.37e-21 | 81.3 |
MS.gene23365.t1 | MTR_4g072460 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 2.53e-21 | 81.3 |
MS.gene23365.t1 | MTR_3g084230 | 58.209 | 67 | 27 | 1 | 40 | 105 | 23 | 89 | 2.67e-21 | 80.9 |
MS.gene23365.t1 | MTR_3g084160 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 3.04e-21 | 80.9 |
MS.gene23365.t1 | MTR_4g072580 | 56.923 | 65 | 27 | 1 | 40 | 103 | 18 | 82 | 3.20e-21 | 80.5 |
MS.gene23365.t1 | MTR_4g072610 | 55.224 | 67 | 29 | 1 | 40 | 105 | 17 | 83 | 3.37e-21 | 80.5 |
MS.gene23365.t1 | MTR_4g072670 | 55.224 | 67 | 29 | 1 | 40 | 105 | 19 | 85 | 3.52e-21 | 80.5 |
MS.gene23365.t1 | MTR_4g072590 | 53.731 | 67 | 30 | 1 | 40 | 105 | 18 | 84 | 4.80e-21 | 80.1 |
MS.gene23365.t1 | MTR_4g072490 | 46.591 | 88 | 36 | 2 | 17 | 103 | 5 | 82 | 7.04e-21 | 79.7 |
MS.gene23365.t1 | MTR_4g072740 | 46.667 | 90 | 37 | 2 | 17 | 105 | 5 | 84 | 9.24e-21 | 79.3 |
MS.gene23365.t1 | MTR_1g063950 | 50.725 | 69 | 34 | 0 | 33 | 101 | 39 | 107 | 1.06e-20 | 80.5 |
MS.gene23365.t1 | MTR_4g072720 | 53.846 | 65 | 29 | 1 | 40 | 103 | 19 | 83 | 1.42e-20 | 79.0 |
MS.gene23365.t1 | MTR_8g461420 | 56.716 | 67 | 28 | 1 | 40 | 105 | 23 | 89 | 1.60e-20 | 79.0 |
MS.gene23365.t1 | MTR_4g050700 | 57.812 | 64 | 26 | 1 | 41 | 103 | 25 | 88 | 1.64e-20 | 79.0 |
MS.gene23365.t1 | MTR_2g012410 | 57.812 | 64 | 26 | 1 | 41 | 103 | 25 | 88 | 1.64e-20 | 79.0 |
MS.gene23365.t1 | MTR_3g110045 | 60.000 | 65 | 25 | 1 | 40 | 103 | 82 | 146 | 1.88e-20 | 80.5 |
MS.gene23365.t1 | MTR_3g084190 | 55.224 | 67 | 29 | 1 | 40 | 105 | 23 | 89 | 1.94e-20 | 79.0 |
MS.gene23365.t1 | MTR_4g072510 | 53.846 | 65 | 29 | 1 | 40 | 103 | 19 | 83 | 1.95e-20 | 78.6 |
MS.gene23365.t1 | MTR_4g072830 | 55.385 | 65 | 28 | 1 | 40 | 103 | 21 | 85 | 2.32e-20 | 78.6 |
MS.gene23365.t1 | MTR_3g110042 | 55.224 | 67 | 29 | 1 | 40 | 105 | 23 | 89 | 2.68e-20 | 78.6 |
MS.gene23365.t1 | MTR_4g072940 | 54.688 | 64 | 28 | 1 | 40 | 102 | 55 | 118 | 2.70e-20 | 79.3 |
MS.gene23365.t1 | MTR_4g072690 | 55.385 | 65 | 28 | 1 | 40 | 103 | 18 | 82 | 4.75e-20 | 77.8 |
MS.gene23365.t1 | MTR_4g072630 | 52.308 | 65 | 30 | 1 | 40 | 103 | 19 | 83 | 6.13e-20 | 77.4 |
MS.gene23365.t1 | MTR_4g072470 | 46.667 | 90 | 37 | 2 | 17 | 105 | 5 | 84 | 6.66e-20 | 77.4 |
MS.gene23365.t1 | MTR_3g084260 | 56.250 | 64 | 27 | 1 | 41 | 103 | 25 | 88 | 6.99e-20 | 77.4 |
MS.gene23365.t1 | MTR_4g072465 | 53.846 | 65 | 29 | 1 | 40 | 103 | 19 | 83 | 7.46e-20 | 77.0 |
MS.gene23365.t1 | MTR_7g101740 | 48.611 | 72 | 37 | 0 | 33 | 104 | 31 | 102 | 1.34e-19 | 77.4 |
MS.gene23365.t1 | MTR_4g072550 | 57.812 | 64 | 26 | 1 | 41 | 103 | 35 | 98 | 1.50e-19 | 77.0 |
MS.gene23365.t1 | MTR_4g072600 | 53.731 | 67 | 30 | 1 | 40 | 105 | 18 | 84 | 1.52e-19 | 76.3 |
MS.gene23365.t1 | MTR_1g024085 | 44.944 | 89 | 47 | 1 | 17 | 105 | 14 | 100 | 1.82e-19 | 77.8 |
MS.gene23365.t1 | MTR_3g110032 | 54.688 | 64 | 28 | 1 | 41 | 103 | 25 | 88 | 1.91e-19 | 76.3 |
MS.gene23365.t1 | MTR_4g072650 | 52.308 | 65 | 30 | 1 | 40 | 103 | 17 | 81 | 3.59e-19 | 75.5 |
MS.gene23365.t1 | MTR_4g072770 | 55.385 | 65 | 28 | 1 | 42 | 105 | 15 | 79 | 6.90e-19 | 74.7 |
MS.gene23365.t1 | MTR_4g072450 | 53.846 | 65 | 29 | 1 | 40 | 103 | 18 | 82 | 9.43e-19 | 74.3 |
MS.gene23365.t1 | MTR_4g072380 | 46.591 | 88 | 37 | 2 | 17 | 103 | 5 | 83 | 2.63e-18 | 73.2 |
MS.gene23365.t1 | MTR_2g043960 | 52.174 | 69 | 33 | 0 | 37 | 105 | 71 | 139 | 3.88e-18 | 74.7 |
MS.gene23365.t1 | MTR_1g094750 | 44.872 | 78 | 40 | 1 | 24 | 101 | 35 | 109 | 5.96e-18 | 73.2 |
MS.gene23365.t1 | MTR_1g061570 | 40.260 | 77 | 46 | 0 | 25 | 101 | 2 | 78 | 1.05e-17 | 72.8 |
MS.gene23365.t1 | MTR_4g124750 | 42.857 | 91 | 48 | 1 | 20 | 106 | 43 | 133 | 2.33e-17 | 72.8 |
MS.gene23365.t1 | MTR_8g461210 | 36.538 | 104 | 58 | 2 | 3 | 106 | 4 | 99 | 6.22e-17 | 70.5 |
MS.gene23365.t1 | MTR_5g008350 | 51.724 | 58 | 27 | 1 | 40 | 96 | 18 | 75 | 6.47e-17 | 69.3 |
MS.gene23365.t1 | MTR_1g009150 | 49.231 | 65 | 33 | 0 | 41 | 105 | 70 | 134 | 1.04e-16 | 71.6 |
MS.gene23365.t1 | MTR_3g109160 | 40.230 | 87 | 49 | 1 | 19 | 105 | 49 | 132 | 1.74e-16 | 70.9 |
MS.gene23365.t1 | MTR_4g072930 | 55.224 | 67 | 25 | 2 | 42 | 103 | 41 | 107 | 3.02e-16 | 68.6 |
MS.gene23365.t1 | MTR_4g072750 | 58.333 | 48 | 20 | 0 | 41 | 88 | 26 | 73 | 4.02e-16 | 67.8 |
MS.gene23365.t1 | MTR_7g118010 | 41.250 | 80 | 39 | 2 | 28 | 105 | 15 | 88 | 1.17e-15 | 67.0 |
MS.gene23365.t1 | MTR_3g110035 | 57.143 | 56 | 23 | 1 | 51 | 105 | 80 | 135 | 1.73e-15 | 67.4 |
MS.gene23365.t1 | MTR_3g092220 | 40.260 | 77 | 44 | 1 | 31 | 105 | 22 | 98 | 1.85e-15 | 66.6 |
MS.gene23365.t1 | MTR_7g104950 | 45.902 | 61 | 33 | 0 | 45 | 105 | 53 | 113 | 2.29e-15 | 67.0 |
MS.gene23365.t1 | MTR_4g025830 | 44.776 | 67 | 34 | 1 | 42 | 105 | 79 | 145 | 2.84e-15 | 67.4 |
MS.gene23365.t1 | MTR_1g059770 | 39.189 | 74 | 45 | 0 | 33 | 106 | 40 | 113 | 3.16e-15 | 66.6 |
MS.gene23365.t1 | MTR_7g104940 | 45.902 | 61 | 33 | 0 | 45 | 105 | 53 | 113 | 4.01e-15 | 66.2 |
MS.gene23365.t1 | MTR_4g072290 | 55.769 | 52 | 22 | 1 | 55 | 105 | 25 | 76 | 4.08e-15 | 65.1 |
MS.gene23365.t1 | MTR_2g095430 | 43.478 | 69 | 35 | 1 | 30 | 94 | 33 | 101 | 7.19e-15 | 65.9 |
MS.gene23365.t1 | MTR_3g084200 | 54.348 | 46 | 21 | 0 | 40 | 85 | 23 | 68 | 8.58e-15 | 64.7 |
MS.gene23365.t1 | MTR_4g072160 | 37.113 | 97 | 54 | 1 | 9 | 105 | 11 | 100 | 1.04e-14 | 65.5 |
MS.gene23365.t1 | MTR_0388s0020 | 43.478 | 69 | 36 | 1 | 40 | 105 | 73 | 141 | 1.74e-14 | 65.1 |
MS.gene23365.t1 | MTR_4g005320 | 43.750 | 64 | 36 | 0 | 42 | 105 | 70 | 133 | 1.83e-14 | 65.5 |
MS.gene23365.t1 | MTR_4g057800 | 42.697 | 89 | 44 | 3 | 10 | 94 | 9 | 94 | 2.98e-14 | 64.3 |
MS.gene23365.t1 | MTR_4g057810 | 40.659 | 91 | 50 | 3 | 13 | 101 | 11 | 99 | 1.20e-13 | 62.4 |
MS.gene23365.t1 | MTR_4g072280 | 55.814 | 43 | 19 | 0 | 41 | 83 | 25 | 67 | 3.24e-13 | 60.1 |
MS.gene23365.t1 | MTR_8g026730 | 42.424 | 66 | 36 | 1 | 42 | 105 | 27 | 92 | 3.54e-13 | 60.8 |
MS.gene23365.t1 | MTR_2g066830 | 35.385 | 65 | 42 | 0 | 42 | 106 | 58 | 122 | 3.00e-12 | 59.3 |
MS.gene23365.t1 | MTR_4g021810 | 43.077 | 65 | 36 | 1 | 42 | 105 | 26 | 90 | 6.62e-12 | 57.4 |
MS.gene23365.t1 | MTR_3g098970 | 42.105 | 57 | 33 | 0 | 42 | 98 | 53 | 109 | 1.19e-11 | 57.8 |
MS.gene23365.t1 | MTR_7g101920 | 46.429 | 56 | 28 | 1 | 41 | 94 | 34 | 89 | 1.96e-11 | 56.2 |
MS.gene23365.t1 | MTR_4g005310 | 43.548 | 62 | 33 | 1 | 42 | 101 | 62 | 123 | 5.37e-11 | 56.2 |
MS.gene23365.t1 | MTR_8g101520 | 35.294 | 102 | 58 | 1 | 1 | 94 | 1 | 102 | 7.42e-11 | 55.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23365.t1 | AT4G34760 | 83.333 | 108 | 15 | 2 | 1 | 106 | 1 | 107 | 3.86e-61 | 182 |
MS.gene23365.t1 | AT2G21220 | 78.095 | 105 | 21 | 1 | 1 | 105 | 1 | 103 | 8.70e-57 | 171 |
MS.gene23365.t1 | AT4G38860 | 78.505 | 107 | 20 | 2 | 1 | 106 | 1 | 105 | 2.26e-55 | 167 |
MS.gene23365.t1 | AT2G16580 | 75.229 | 109 | 23 | 2 | 1 | 106 | 1 | 108 | 6.10e-55 | 166 |
MS.gene23365.t1 | AT1G75580 | 76.190 | 105 | 21 | 2 | 6 | 106 | 4 | 108 | 1.44e-53 | 163 |
MS.gene23365.t1 | AT1G19830 | 66.087 | 115 | 28 | 3 | 1 | 106 | 1 | 113 | 1.94e-48 | 150 |
MS.gene23365.t1 | AT4G36110 | 70.755 | 106 | 29 | 1 | 1 | 106 | 1 | 104 | 8.48e-48 | 148 |
MS.gene23365.t1 | AT2G18010 | 64.286 | 112 | 34 | 1 | 1 | 106 | 1 | 112 | 8.42e-46 | 143 |
MS.gene23365.t1 | AT5G66260 | 66.292 | 89 | 28 | 1 | 17 | 105 | 11 | 97 | 2.99e-35 | 116 |
MS.gene23365.t1 | AT2G21210 | 48.889 | 90 | 41 | 3 | 17 | 103 | 5 | 92 | 1.95e-24 | 89.4 |
MS.gene23365.t1 | AT4G34770 | 61.765 | 68 | 23 | 2 | 41 | 105 | 34 | 101 | 5.74e-24 | 88.2 |
MS.gene23365.t1 | AT2G21210 | 48.889 | 90 | 41 | 3 | 17 | 103 | 72 | 159 | 7.61e-24 | 89.7 |
MS.gene23365.t1 | AT4G38840 | 64.615 | 65 | 21 | 2 | 41 | 103 | 32 | 96 | 1.40e-23 | 87.0 |
MS.gene23365.t1 | AT4G13790 | 55.714 | 70 | 28 | 2 | 40 | 106 | 23 | 92 | 1.39e-22 | 84.3 |
MS.gene23365.t1 | AT3G51200 | 48.387 | 93 | 40 | 3 | 15 | 105 | 17 | 103 | 1.42e-22 | 84.7 |
MS.gene23365.t1 | AT4G34810 | 52.747 | 91 | 36 | 4 | 18 | 103 | 26 | 114 | 1.59e-22 | 85.1 |
MS.gene23365.t1 | AT5G18080 | 47.253 | 91 | 35 | 3 | 18 | 106 | 11 | 90 | 2.15e-21 | 81.3 |
MS.gene23365.t1 | AT4G34800 | 60.938 | 64 | 21 | 2 | 42 | 101 | 21 | 84 | 2.20e-21 | 81.3 |
MS.gene23365.t1 | AT4G38825 | 48.148 | 81 | 40 | 2 | 27 | 105 | 8 | 88 | 2.85e-21 | 80.9 |
MS.gene23365.t1 | AT4G38850 | 47.312 | 93 | 31 | 3 | 18 | 106 | 11 | 89 | 3.66e-21 | 80.5 |
MS.gene23365.t1 | AT2G21200 | 58.209 | 67 | 26 | 2 | 41 | 105 | 20 | 86 | 4.15e-21 | 80.5 |
MS.gene23365.t1 | AT5G18030 | 56.716 | 67 | 27 | 2 | 42 | 106 | 22 | 88 | 4.19e-21 | 80.5 |
MS.gene23365.t1 | AT4G34780 | 54.930 | 71 | 28 | 2 | 40 | 106 | 26 | 96 | 6.71e-21 | 80.5 |
MS.gene23365.t1 | AT5G18020 | 60.938 | 64 | 23 | 2 | 42 | 103 | 24 | 87 | 7.11e-21 | 80.1 |
MS.gene23365.t1 | AT5G18010 | 46.154 | 91 | 36 | 3 | 18 | 106 | 11 | 90 | 1.05e-20 | 79.3 |
MS.gene23365.t1 | AT5G18050 | 55.224 | 67 | 28 | 2 | 42 | 106 | 24 | 90 | 1.29e-20 | 79.3 |
MS.gene23365.t1 | AT3G03830 | 57.971 | 69 | 25 | 2 | 42 | 106 | 24 | 92 | 1.52e-20 | 79.3 |
MS.gene23365.t1 | AT5G18060 | 58.462 | 65 | 25 | 2 | 43 | 105 | 25 | 89 | 1.67e-20 | 79.0 |
MS.gene23365.t1 | AT3G43120 | 46.512 | 86 | 45 | 1 | 21 | 106 | 59 | 143 | 1.07e-19 | 79.0 |
MS.gene23365.t1 | AT3G03820 | 54.286 | 70 | 28 | 2 | 41 | 106 | 26 | 95 | 2.05e-19 | 76.3 |
MS.gene23365.t1 | AT3G03840 | 55.072 | 69 | 28 | 2 | 41 | 106 | 26 | 94 | 2.86e-19 | 75.9 |
MS.gene23365.t1 | AT3G20220 | 49.180 | 61 | 30 | 1 | 42 | 101 | 47 | 107 | 4.40e-19 | 76.3 |
MS.gene23365.t1 | AT1G75590 | 40.659 | 91 | 54 | 0 | 9 | 99 | 9 | 99 | 6.27e-19 | 76.6 |
MS.gene23365.t1 | AT2G37030 | 52.459 | 61 | 29 | 0 | 38 | 98 | 45 | 105 | 1.36e-18 | 75.1 |
MS.gene23365.t1 | AT5G20810 | 53.846 | 65 | 30 | 0 | 37 | 101 | 74 | 138 | 1.45e-18 | 76.3 |
MS.gene23365.t1 | AT4G34790 | 56.923 | 65 | 25 | 2 | 42 | 103 | 39 | 103 | 2.84e-18 | 73.9 |
MS.gene23365.t1 | AT4G34750 | 39.604 | 101 | 54 | 2 | 8 | 105 | 4 | 100 | 3.01e-18 | 75.1 |
MS.gene23365.t1 | AT4G34750 | 39.604 | 101 | 54 | 2 | 8 | 105 | 4 | 100 | 3.01e-18 | 75.1 |
MS.gene23365.t1 | AT5G20810 | 53.846 | 65 | 30 | 0 | 37 | 101 | 74 | 138 | 3.86e-18 | 75.5 |
MS.gene23365.t1 | AT3G03850 | 55.224 | 67 | 27 | 2 | 43 | 106 | 26 | 92 | 6.31e-18 | 72.4 |
MS.gene23365.t1 | AT1G19840 | 41.573 | 89 | 51 | 1 | 17 | 105 | 17 | 104 | 4.36e-17 | 72.0 |
MS.gene23365.t1 | AT5G10990 | 40.964 | 83 | 48 | 1 | 17 | 99 | 17 | 98 | 7.77e-17 | 71.2 |
MS.gene23365.t1 | AT3G60690 | 46.575 | 73 | 36 | 1 | 36 | 105 | 82 | 154 | 9.87e-16 | 68.9 |
MS.gene23365.t1 | AT1G56150 | 31.373 | 102 | 58 | 1 | 17 | 106 | 1 | 102 | 1.90e-15 | 66.6 |
MS.gene23365.t1 | AT2G28085 | 47.059 | 68 | 32 | 1 | 31 | 94 | 44 | 111 | 2.11e-15 | 67.0 |
MS.gene23365.t1 | AT4G31320 | 45.312 | 64 | 35 | 0 | 42 | 105 | 80 | 143 | 2.55e-15 | 68.2 |
MS.gene23365.t1 | AT3G61900 | 45.588 | 68 | 34 | 1 | 41 | 105 | 29 | 96 | 2.99e-15 | 67.0 |
MS.gene23365.t1 | AT2G45210 | 41.892 | 74 | 40 | 1 | 35 | 105 | 72 | 145 | 5.29e-15 | 67.0 |
MS.gene23365.t1 | AT2G24400 | 46.875 | 64 | 34 | 0 | 42 | 105 | 64 | 127 | 5.38e-15 | 67.0 |
MS.gene23365.t1 | AT3G53250 | 42.466 | 73 | 37 | 2 | 26 | 98 | 38 | 105 | 5.49e-14 | 63.2 |
MS.gene23365.t1 | AT3G53250 | 37.500 | 96 | 55 | 2 | 3 | 98 | 46 | 136 | 9.99e-14 | 63.5 |
MS.gene23365.t1 | AT3G12830 | 40.000 | 65 | 39 | 0 | 42 | 106 | 50 | 114 | 1.42e-13 | 62.4 |
MS.gene23365.t1 | AT2G46690 | 42.647 | 68 | 36 | 1 | 41 | 105 | 23 | 90 | 1.71e-13 | 62.0 |
MS.gene23365.t1 | AT1G16510 | 40.000 | 65 | 39 | 0 | 42 | 106 | 54 | 118 | 4.19e-13 | 61.6 |
MS.gene23365.t1 | AT5G53590 | 44.286 | 70 | 34 | 1 | 41 | 105 | 45 | 114 | 4.55e-13 | 61.2 |
MS.gene23365.t1 | AT1G79130 | 40.000 | 65 | 39 | 0 | 42 | 106 | 48 | 112 | 6.45e-13 | 60.8 |
MS.gene23365.t1 | AT2G36210 | 38.961 | 77 | 45 | 2 | 31 | 105 | 42 | 118 | 1.49e-12 | 59.7 |
MS.gene23365.t1 | AT4G09530 | 43.750 | 64 | 32 | 2 | 42 | 101 | 28 | 91 | 3.22e-12 | 58.2 |
MS.gene23365.t1 | AT4G00880 | 42.424 | 66 | 36 | 1 | 42 | 105 | 28 | 93 | 5.90e-12 | 58.2 |
MS.gene23365.t1 | AT1G76190 | 39.683 | 63 | 37 | 1 | 44 | 106 | 23 | 84 | 7.80e-12 | 57.8 |
MS.gene23365.t1 | AT4G12410 | 41.791 | 67 | 36 | 1 | 42 | 105 | 76 | 142 | 8.36e-11 | 55.8 |
MS.gene23365.t1 | AT1G20470 | 42.857 | 63 | 35 | 1 | 44 | 106 | 25 | 86 | 9.50e-11 | 55.5 |
Find 10 sgRNAs with CRISPR-Local
Find 19 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGTCAAGCTGAAGAAGAATT+TGG | 0.180585 | 4.4:+36927177 | MS.gene23365:CDS |
GTTGGAGTATTTCTTGATAA+TGG | 0.303731 | 4.4:-36926959 | None:intergenic |
GGATGAGTTAAGAAAGATAT+TGG | 0.367426 | 4.4:-36927135 | None:intergenic |
TAGACAGGAAAATGACCTTT+TGG | 0.421755 | 4.4:-36927081 | None:intergenic |
CTCAAAAGATGTTCAAGCTT+AGG | 0.460632 | 4.4:+36927015 | MS.gene23365:CDS |
TGATGATAATGAACTACCTA+TGG | 0.494980 | 4.4:+36927053 | MS.gene23365:CDS |
CGAAGTAGTGATTGAAACTC+AGG | 0.507028 | 4.4:-36927156 | None:intergenic |
CTACCTATGGATGTTCCAAA+AGG | 0.526934 | 4.4:+36927066 | MS.gene23365:CDS |
TTGGAACAATATATCTACTA+CGG | 0.543081 | 4.4:-36927116 | None:intergenic |
CTTCTTGACAAGGAATAGTG+AGG | 0.705041 | 4.4:-36927218 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | TTGGAACAATATATCTACTA+CGG | - | chr4.4:36927119-36927138 | None:intergenic | 25.0% |
!!! | ATTTGGTTTTGATCATGATA+TGG | + | chr4.4:36927194-36927213 | MS.gene23365:CDS | 25.0% |
!!! | TTTGGTTTTGATCATGATAT+GGG | + | chr4.4:36927195-36927214 | MS.gene23365:CDS | 25.0% |
GGATGAGTTAAGAAAGATAT+TGG | - | chr4.4:36927138-36927157 | None:intergenic | 30.0% | |
TGAAAAACAACTTCTTGACA+AGG | - | chr4.4:36927231-36927250 | None:intergenic | 30.0% | |
! | GTTGGAGTATTTCTTGATAA+TGG | - | chr4.4:36926962-36926981 | None:intergenic | 30.0% |
! | TGATGATAATGAACTACCTA+TGG | + | chr4.4:36927053-36927072 | MS.gene23365:CDS | 30.0% |
! | TGTTTCAAAACTGCATTTTG+AGG | - | chr4.4:36926991-36927010 | None:intergenic | 30.0% |
CTCAAAAGATGTTCAAGCTT+AGG | + | chr4.4:36927015-36927034 | MS.gene23365:CDS | 35.0% | |
! | CTAAGCTTGAACATCTTTTG+AGG | - | chr4.4:36927017-36927036 | None:intergenic | 35.0% |
! | TAGACAGGAAAATGACCTTT+TGG | - | chr4.4:36927084-36927103 | None:intergenic | 35.0% |
!!! | TGCATTTTGAGGTAGTTTGT+TGG | - | chr4.4:36926980-36926999 | None:intergenic | 35.0% |
CGAAGTAGTGATTGAAACTC+AGG | - | chr4.4:36927159-36927178 | None:intergenic | 40.0% | |
CGTCAAGCTGAAGAAGAATT+TGG | + | chr4.4:36927177-36927196 | MS.gene23365:CDS | 40.0% | |
CTACCTATGGATGTTCCAAA+AGG | + | chr4.4:36927066-36927085 | MS.gene23365:CDS | 40.0% | |
CTTCTTGACAAGGAATAGTG+AGG | - | chr4.4:36927221-36927240 | None:intergenic | 40.0% | |
!!! | TGACCTTTTGGAACATCCAT+AGG | - | chr4.4:36927072-36927091 | None:intergenic | 40.0% |
!! | GGTCATTTTCCTGTCTACGT+AGG | + | chr4.4:36927087-36927106 | MS.gene23365:CDS | 45.0% |
! | CGGTTTTCACCTACGTAGAC+AGG | - | chr4.4:36927099-36927118 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 36926955 | 36927275 | 36926955 | ID=MS.gene23365 |
chr4.4 | mRNA | 36926955 | 36927275 | 36926955 | ID=MS.gene23365.t1;Parent=MS.gene23365 |
chr4.4 | exon | 36926955 | 36927275 | 36926955 | ID=MS.gene23365.t1.exon1;Parent=MS.gene23365.t1 |
chr4.4 | CDS | 36926955 | 36927275 | 36926955 | ID=cds.MS.gene23365.t1;Parent=MS.gene23365.t1 |
Gene Sequence |
Protein sequence |