AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69418


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69418.t1 MTR_3g113310 100.000 106 0 0 1 106 1 106 3.90e-77 222
MS.gene69418.t1 MTR_3g117610 72.222 108 27 2 1 105 1 108 3.25e-51 157
MS.gene69418.t1 MTR_5g021820 67.925 106 32 1 1 106 1 104 5.10e-51 156
MS.gene69418.t1 MTR_4g072190 72.222 108 20 2 1 106 1 100 2.12e-50 154
MS.gene69418.t1 MTR_8g076040 70.093 107 29 3 1 106 1 105 5.10e-48 149
MS.gene69418.t1 MTR_6g077850 58.947 95 38 1 12 105 4 98 6.52e-34 113
MS.gene69418.t1 MTR_4g072880 49.438 89 38 2 18 105 8 90 4.76e-28 98.2
MS.gene69418.t1 MTR_4g072500 63.636 66 23 1 41 105 24 89 6.11e-27 95.5
MS.gene69418.t1 MTR_4g072310 61.194 67 25 1 40 105 24 90 1.04e-26 94.7
MS.gene69418.t1 MTR_4g072640 62.121 66 24 1 42 106 25 90 1.04e-26 94.7
MS.gene69418.t1 MTR_4g072270 61.538 65 24 1 40 103 24 88 1.12e-26 94.7
MS.gene69418.t1 MTR_4g072530 62.121 66 24 1 41 105 24 89 8.14e-26 92.4
MS.gene69418.t1 MTR_4g072820 59.701 67 26 1 41 106 19 85 1.42e-25 91.7
MS.gene69418.t1 MTR_4g072220 58.209 67 27 1 40 105 24 90 2.17e-25 91.3
MS.gene69418.t1 MTR_4g072860 50.000 90 38 2 18 106 8 91 2.34e-25 91.3
MS.gene69418.t1 MTR_4g072250 59.701 67 25 2 40 105 24 89 2.99e-25 90.9
MS.gene69418.t1 MTR_4g072730 58.824 68 27 1 40 106 23 90 4.24e-25 90.5
MS.gene69418.t1 MTR_4g072480 58.209 67 27 1 40 105 23 89 5.06e-25 90.5
MS.gene69418.t1 MTR_8g461410 56.923 65 27 1 40 103 23 87 6.29e-25 90.1
MS.gene69418.t1 MTR_4g072910 62.121 66 24 1 41 105 34 99 6.56e-25 90.5
MS.gene69418.t1 MTR_4g072370 59.701 67 26 1 40 105 21 87 7.09e-25 90.1
MS.gene69418.t1 MTR_4g072260 58.209 67 27 1 40 105 24 90 7.21e-25 90.1
MS.gene69418.t1 MTR_4g072620 57.353 68 28 1 40 106 23 90 1.07e-24 89.7
MS.gene69418.t1 MTR_5g008360 55.882 68 29 1 40 106 14 81 1.26e-24 89.4
MS.gene69418.t1 MTR_4g072890 58.209 67 27 1 40 105 24 90 1.64e-24 89.0
MS.gene69418.t1 MTR_3g084150 56.923 65 27 1 40 103 23 87 1.82e-24 89.0
MS.gene69418.t1 MTR_3g084240 60.000 65 25 1 40 103 23 87 2.21e-24 89.0
MS.gene69418.t1 MTR_3g084180 56.923 65 27 1 40 103 23 87 2.41e-24 88.6
MS.gene69418.t1 MTR_3g084170 60.000 65 25 1 40 103 23 87 2.69e-24 88.6
MS.gene69418.t1 MTR_4g072870 48.913 92 40 3 15 105 5 90 3.08e-24 88.6
MS.gene69418.t1 MTR_4g072240 53.731 67 30 1 40 105 24 90 3.55e-24 88.2
MS.gene69418.t1 MTR_3g110038 58.462 65 26 1 40 103 23 87 4.70e-24 88.2
MS.gene69418.t1 MTR_3g084250 58.824 68 27 1 39 105 22 89 8.56e-24 87.4
MS.gene69418.t1 MTR_5g008370 58.209 67 27 1 41 106 24 90 8.71e-24 88.6
MS.gene69418.t1 MTR_4g072230 60.000 65 23 2 40 103 24 86 1.41e-23 86.7
MS.gene69418.t1 MTR_4g072570 55.224 67 29 1 40 105 23 89 1.51e-23 86.7
MS.gene69418.t1 MTR_4g072580 55.224 67 29 1 40 105 18 84 1.71e-23 86.3
MS.gene69418.t1 MTR_4g072660 56.923 65 27 1 40 103 18 82 1.87e-23 86.3
MS.gene69418.t1 MTR_4g072540 54.412 68 30 1 40 106 19 86 1.92e-23 86.3
MS.gene69418.t1 MTR_4g072330 56.061 66 28 1 41 105 22 87 2.07e-23 86.3
MS.gene69418.t1 MTR_4g072300 52.239 67 31 1 40 105 24 90 2.25e-23 86.3
MS.gene69418.t1 MTR_3g084210 58.824 68 27 1 39 105 22 89 2.91e-23 85.9
MS.gene69418.t1 MTR_4g072980 49.020 102 37 5 8 106 4 93 3.09e-23 85.9
MS.gene69418.t1 MTR_4g072560 56.716 67 27 2 41 105 31 97 3.30e-23 86.3
MS.gene69418.t1 MTR_4g072850 54.412 68 30 1 40 106 25 92 3.58e-23 85.9
MS.gene69418.t1 MTR_3g084220 60.000 65 25 1 40 103 23 87 4.46e-23 85.5
MS.gene69418.t1 MTR_3g117630 56.923 65 27 1 40 103 23 87 4.97e-23 85.5
MS.gene69418.t1 MTR_4g072610 56.716 67 28 1 40 105 17 83 6.83e-23 84.7
MS.gene69418.t1 MTR_4g072680 55.224 67 29 1 40 105 23 89 7.77e-23 85.1
MS.gene69418.t1 MTR_4g072550 57.812 64 26 1 41 103 35 98 9.61e-23 85.1
MS.gene69418.t1 MTR_4g072460 54.412 68 30 1 40 106 23 90 1.19e-22 84.3
MS.gene69418.t1 MTR_3g084160 55.882 68 29 1 39 105 22 89 1.40e-22 84.3
MS.gene69418.t1 MTR_3g084230 57.353 68 28 1 39 105 22 89 1.46e-22 84.3
MS.gene69418.t1 MTR_4g072590 52.941 68 31 1 40 106 18 85 3.03e-22 83.2
MS.gene69418.t1 MTR_4g072510 52.941 68 31 1 40 106 19 86 6.76e-22 82.4
MS.gene69418.t1 MTR_4g072830 53.731 67 30 1 40 105 21 87 6.83e-22 82.4
MS.gene69418.t1 MTR_4g072490 52.239 67 31 1 40 105 18 84 7.03e-22 82.4
MS.gene69418.t1 MTR_3g117640 58.209 67 26 2 41 105 33 99 7.26e-22 82.8
MS.gene69418.t1 MTR_4g072940 51.471 68 32 1 40 106 55 122 8.15e-22 83.2
MS.gene69418.t1 MTR_4g072740 53.731 67 30 1 40 105 18 84 8.37e-22 82.0
MS.gene69418.t1 MTR_8g461420 55.882 68 29 1 39 105 22 89 8.49e-22 82.4
MS.gene69418.t1 MTR_4g072670 53.731 67 30 1 40 105 19 85 8.69e-22 82.0
MS.gene69418.t1 MTR_3g084190 54.412 68 30 1 39 105 22 89 9.57e-22 82.0
MS.gene69418.t1 MTR_4g072720 51.471 68 32 1 40 106 19 86 1.09e-21 81.6
MS.gene69418.t1 MTR_4g050700 56.250 64 27 1 41 103 25 88 1.24e-21 82.0
MS.gene69418.t1 MTR_2g012410 56.250 64 27 1 41 103 25 88 1.24e-21 82.0
MS.gene69418.t1 MTR_3g110045 58.209 67 27 1 40 105 82 148 1.94e-21 83.2
MS.gene69418.t1 MTR_4g072600 53.731 67 30 1 40 105 18 84 2.21e-21 81.3
MS.gene69418.t1 MTR_4g072470 53.731 67 30 1 40 105 18 84 2.87e-21 80.9
MS.gene69418.t1 MTR_3g110042 56.667 60 25 1 40 98 23 82 4.62e-21 80.5
MS.gene69418.t1 MTR_4g072630 50.746 67 32 1 40 105 19 85 8.99e-21 79.3
MS.gene69418.t1 MTR_4g072930 46.078 102 43 3 14 103 6 107 1.37e-20 79.7
MS.gene69418.t1 MTR_4g072770 57.143 63 26 1 42 103 15 77 1.45e-20 79.0
MS.gene69418.t1 MTR_4g072650 52.239 67 31 1 40 105 17 83 1.49e-20 79.0
MS.gene69418.t1 MTR_4g072690 53.030 66 30 1 42 106 20 85 1.84e-20 78.6
MS.gene69418.t1 MTR_3g084260 53.125 64 29 1 41 103 25 88 2.96e-20 78.6
MS.gene69418.t1 MTR_4g072465 50.769 65 31 1 40 103 19 83 4.77e-20 77.8
MS.gene69418.t1 MTR_4g072380 53.125 64 29 1 41 103 20 83 1.96e-19 76.3
MS.gene69418.t1 MTR_3g110032 51.562 64 30 1 41 103 25 88 1.97e-19 76.3
MS.gene69418.t1 MTR_4g072450 50.746 67 32 1 40 105 18 84 3.94e-19 75.5
MS.gene69418.t1 MTR_1g063950 55.738 61 27 0 41 101 47 107 5.93e-19 75.9
MS.gene69418.t1 MTR_7g101740 53.125 64 30 0 41 104 39 102 3.03e-18 73.9
MS.gene69418.t1 MTR_1g094750 51.724 58 28 0 41 98 49 106 5.81e-17 70.5
MS.gene69418.t1 MTR_5g008350 49.123 57 28 1 40 95 18 74 7.62e-17 69.3
MS.gene69418.t1 MTR_1g024085 37.895 95 55 1 5 99 4 94 1.18e-16 70.5
MS.gene69418.t1 MTR_2g043960 52.459 61 29 0 41 101 75 135 2.52e-16 70.1
MS.gene69418.t1 MTR_4g072750 56.250 48 21 0 41 88 26 73 3.53e-16 67.8
MS.gene69418.t1 MTR_1g009150 41.573 89 51 1 17 105 47 134 4.57e-16 70.1
MS.gene69418.t1 MTR_3g084200 53.061 49 23 0 40 88 23 71 7.24e-16 67.4
MS.gene69418.t1 MTR_4g072290 53.846 52 23 1 55 105 25 76 8.81e-16 66.6
MS.gene69418.t1 MTR_4g124750 46.970 66 35 0 41 106 68 133 2.10e-15 67.8
MS.gene69418.t1 MTR_3g110035 55.357 56 24 1 51 105 80 135 2.80e-15 67.0
MS.gene69418.t1 MTR_3g109160 39.326 89 49 1 17 105 49 132 3.49e-15 67.4
MS.gene69418.t1 MTR_0388s0020 42.857 70 37 1 39 105 72 141 1.19e-14 65.5
MS.gene69418.t1 MTR_4g025830 38.298 94 46 3 22 105 54 145 1.47e-14 65.5
MS.gene69418.t1 MTR_8g461210 43.939 66 37 0 41 106 34 99 1.55e-14 64.3
MS.gene69418.t1 MTR_7g104950 44.262 61 34 0 45 105 53 113 4.29e-14 63.5
MS.gene69418.t1 MTR_7g118010 40.909 66 37 1 42 105 23 88 7.42e-14 62.4
MS.gene69418.t1 MTR_3g092220 38.356 73 43 1 35 105 26 98 7.46e-14 62.8
MS.gene69418.t1 MTR_7g104940 41.935 62 36 0 45 106 53 114 1.00e-13 62.8
MS.gene69418.t1 MTR_4g072280 52.273 44 21 0 40 83 24 67 1.33e-13 61.2
MS.gene69418.t1 MTR_1g059770 38.462 65 40 0 42 106 49 113 2.73e-13 61.6
MS.gene69418.t1 MTR_1g061570 42.623 61 35 0 41 101 18 78 3.27e-13 61.2
MS.gene69418.t1 MTR_3g098970 40.000 65 39 0 34 98 45 109 6.45e-13 61.2
MS.gene69418.t1 MTR_4g005310 32.000 100 57 2 4 101 33 123 6.74e-13 61.2
MS.gene69418.t1 MTR_4g072160 43.077 65 37 0 41 105 36 100 6.83e-13 60.8
MS.gene69418.t1 MTR_4g005320 42.188 64 37 0 42 105 70 133 1.29e-12 60.5
MS.gene69418.t1 MTR_2g095430 45.614 57 27 1 41 93 44 100 2.51e-12 59.3
MS.gene69418.t1 MTR_8g026730 39.394 66 38 1 42 105 27 92 3.80e-12 58.2
MS.gene69418.t1 MTR_4g057800 50.877 57 24 1 41 93 37 93 4.50e-12 58.5
MS.gene69418.t1 MTR_4g057810 41.270 63 35 1 41 101 37 99 8.75e-12 57.4
MS.gene69418.t1 MTR_8g101520 30.000 110 71 1 2 105 4 113 1.15e-11 58.2
MS.gene69418.t1 MTR_8g096470 41.071 56 33 0 43 98 47 102 9.81e-11 54.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69418.t1 AT1G75580 75.000 108 25 1 1 106 1 108 2.89e-55 167
MS.gene69418.t1 AT4G34760 73.832 107 27 1 1 106 1 107 1.16e-53 163
MS.gene69418.t1 AT2G21220 69.524 105 30 1 1 105 1 103 8.12e-50 153
MS.gene69418.t1 AT4G38860 71.963 107 27 2 1 106 1 105 3.68e-49 152
MS.gene69418.t1 AT1G19830 69.027 113 28 3 1 106 1 113 8.62e-48 149
MS.gene69418.t1 AT2G16580 68.571 105 32 1 3 106 4 108 1.17e-46 145
MS.gene69418.t1 AT4G36110 64.815 108 32 2 1 106 1 104 6.88e-43 135
MS.gene69418.t1 AT2G18010 61.607 112 37 2 1 106 1 112 9.29e-40 128
MS.gene69418.t1 AT5G66260 59.341 91 33 1 15 105 11 97 1.66e-32 109
MS.gene69418.t1 AT4G34770 60.294 68 24 2 41 105 34 101 3.36e-24 89.0
MS.gene69418.t1 AT2G21210 47.222 108 40 4 1 105 1 94 1.48e-23 87.0
MS.gene69418.t1 AT4G38840 60.000 65 24 2 41 103 32 96 1.94e-23 86.7
MS.gene69418.t1 AT2G21210 47.222 108 40 4 1 105 68 161 5.69e-23 87.4
MS.gene69418.t1 AT5G18030 58.209 67 26 2 42 106 22 88 1.19e-22 84.3
MS.gene69418.t1 AT2G21200 58.209 67 26 2 41 105 20 86 2.25e-22 83.6
MS.gene69418.t1 AT5G18080 46.237 93 35 3 16 106 11 90 3.37e-22 83.2
MS.gene69418.t1 AT3G51200 41.121 107 49 3 1 101 1 99 5.91e-22 83.2
MS.gene69418.t1 AT5G18010 46.237 93 35 3 16 106 11 90 6.01e-22 82.8
MS.gene69418.t1 AT5G18020 59.375 64 24 2 42 103 24 87 7.19e-22 82.4
MS.gene69418.t1 AT4G13790 52.857 70 30 2 40 106 23 92 8.51e-22 82.4
MS.gene69418.t1 AT5G18060 58.462 65 25 2 43 105 25 89 1.01e-21 82.0
MS.gene69418.t1 AT5G18050 55.224 67 28 2 42 106 24 90 1.06e-21 82.0
MS.gene69418.t1 AT4G38825 54.286 70 30 2 38 105 19 88 3.86e-21 80.5
MS.gene69418.t1 AT4G38850 43.158 95 34 3 16 106 11 89 1.26e-20 79.3
MS.gene69418.t1 AT3G03840 53.623 69 29 2 41 106 26 94 1.87e-20 79.0
MS.gene69418.t1 AT4G34810 47.917 96 35 5 16 103 26 114 2.34e-20 79.3
MS.gene69418.t1 AT3G03850 56.716 67 26 2 43 106 26 92 2.66e-20 78.6
MS.gene69418.t1 AT4G34800 56.250 64 24 2 42 101 21 84 5.67e-20 77.8
MS.gene69418.t1 AT3G03820 51.429 70 30 2 41 106 26 95 9.65e-20 77.4
MS.gene69418.t1 AT4G34780 53.521 71 29 2 40 106 26 96 1.33e-19 77.0
MS.gene69418.t1 AT3G03830 53.623 69 28 2 42 106 24 92 3.18e-19 75.9
MS.gene69418.t1 AT3G20220 47.541 61 31 1 42 101 47 107 5.12e-18 73.6
MS.gene69418.t1 AT4G34750 38.614 101 59 1 5 105 3 100 2.21e-17 72.8
MS.gene69418.t1 AT4G34750 38.614 101 59 1 5 105 3 100 2.21e-17 72.8
MS.gene69418.t1 AT3G43120 54.098 61 28 0 41 101 78 138 2.75e-17 72.8
MS.gene69418.t1 AT2G37030 53.448 58 27 0 41 98 48 105 3.29e-17 71.6
MS.gene69418.t1 AT4G34790 52.308 65 28 2 42 103 39 103 7.38e-17 70.1
MS.gene69418.t1 AT1G75590 37.895 95 57 1 5 99 7 99 1.12e-16 70.9
MS.gene69418.t1 AT5G20810 52.459 61 29 0 41 101 78 138 1.70e-16 70.9
MS.gene69418.t1 AT5G20810 52.459 61 29 0 41 101 78 138 3.27e-16 70.5
MS.gene69418.t1 AT5G10990 50.847 59 29 0 41 99 40 98 3.80e-15 67.0
MS.gene69418.t1 AT1G19840 37.895 95 56 1 5 99 7 98 1.25e-14 65.5
MS.gene69418.t1 AT3G61900 41.096 73 39 2 36 105 25 96 2.31e-14 64.7
MS.gene69418.t1 AT4G09530 44.118 68 34 2 42 105 28 95 4.85e-14 62.8
MS.gene69418.t1 AT2G24400 46.875 64 34 0 42 105 64 127 7.40e-14 64.3
MS.gene69418.t1 AT5G53590 44.286 70 34 1 41 105 45 114 1.40e-13 62.8
MS.gene69418.t1 AT2G45210 41.791 67 36 1 42 105 79 145 1.44e-13 63.2
MS.gene69418.t1 AT4G31320 45.312 64 35 0 42 105 80 143 2.09e-13 63.2
MS.gene69418.t1 AT3G60690 43.284 67 35 1 42 105 88 154 2.15e-13 62.8
MS.gene69418.t1 AT2G46690 39.706 68 38 1 41 105 23 90 1.49e-12 59.7
MS.gene69418.t1 AT1G56150 32.353 102 59 1 15 106 1 102 2.23e-12 58.9
MS.gene69418.t1 AT2G28085 48.276 58 26 1 41 94 54 111 3.20e-12 58.9
MS.gene69418.t1 AT1G79130 41.538 65 38 0 42 106 48 112 1.00e-11 57.8
MS.gene69418.t1 AT3G12830 40.000 65 39 0 42 106 50 114 1.82e-11 57.0
MS.gene69418.t1 AT4G12410 44.444 63 32 1 42 101 76 138 2.90e-11 57.0
MS.gene69418.t1 AT3G53250 35.385 65 39 1 34 98 44 105 3.31e-11 56.2
MS.gene69418.t1 AT4G00880 39.394 66 38 1 42 105 28 93 7.03e-11 55.1
MS.gene69418.t1 AT1G76190 38.095 63 38 1 44 106 23 84 7.41e-11 55.1

Find 17 sgRNAs with CRISPR-Local

Find 21 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAAGCAGAAGAAGAGTT+TGG 0.272639 3.3:-93067737 MS.gene69418:CDS
TATACAACAAAGTGACCTTT+TGG 0.315026 3.3:+93067833 None:intergenic
TGATCATCATGGTCTTCGTT+TGG 0.370411 3.3:-93067861 MS.gene69418:CDS
ATCAAGCAGAAGAAGAGTTT+GGG 0.391525 3.3:-93067736 MS.gene69418:CDS
CTTCTTCTGCTTGATGAAGA+AGG 0.410523 3.3:+93067744 None:intergenic
GGTCTACTTAGAAAAGCAAT+AGG 0.458823 3.3:+93067779 None:intergenic
CTTAAAAGATGTTCAAGTCT+AGG 0.465781 3.3:-93067905 MS.gene69418:CDS
CTTCGTTTGGATGTTCCAAA+AGG 0.478320 3.3:-93067848 MS.gene69418:CDS
AACATCTTGGTTGCATGGAA+TGG 0.497565 3.3:+93067691 None:intergenic
GGTCACTTTGTTGTATATGT+TGG 0.526002 3.3:-93067827 MS.gene69418:CDS
TGTTTGATGAGTGCTGTTTG+AGG 0.534488 3.3:+93067932 None:intergenic
CAAGGGTACGTTGATCATCA+TGG 0.559732 3.3:-93067872 MS.gene69418:CDS
GTTTGGGTTTGATCATGACA+TGG 0.586043 3.3:-93067720 MS.gene69418:CDS
TTTGGGTTTGATCATGACAT+GGG 0.603751 3.3:-93067719 MS.gene69418:CDS
ATGTTGGTGAGAACAGAAGC+AGG 0.613401 3.3:-93067811 MS.gene69418:CDS
AGTCTAGGCAAGAAACAACA+AGG 0.622463 3.3:-93067890 MS.gene69418:CDS
GTCTAGGCAAGAAACAACAA+GGG 0.721725 3.3:-93067889 MS.gene69418:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
CTTAAAAGATGTTCAAGTCT+AGG - chr3.3:93067715-93067734 MS.gene69418:CDS 30.0%
TAAGAGACTCAAAAACATCT+TGG + chr3.3:93067945-93067964 None:intergenic 30.0%
! CTAGACTTGAACATCTTTTA+AGG + chr3.3:93067717-93067736 None:intergenic 30.0%
! TATACAACAAAGTGACCTTT+TGG + chr3.3:93067790-93067809 None:intergenic 30.0%
ATCAAGCAGAAGAAGAGTTT+GGG - chr3.3:93067884-93067903 MS.gene69418:CDS 35.0%
GGTCTACTTAGAAAAGCAAT+AGG + chr3.3:93067844-93067863 None:intergenic 35.0%
TCAAAAACATCTTGGTTGCA+TGG + chr3.3:93067937-93067956 None:intergenic 35.0%
! GGTCACTTTGTTGTATATGT+TGG - chr3.3:93067793-93067812 MS.gene69418:CDS 35.0%
! TTTGGGTTTGATCATGACAT+GGG - chr3.3:93067901-93067920 MS.gene69418:CDS 35.0%
!!! TGAAGAAGGTTTTGAAACTC+TGG + chr3.3:93067865-93067884 None:intergenic 35.0%
AACATCTTGGTTGCATGGAA+TGG + chr3.3:93067932-93067951 None:intergenic 40.0%
AGTCTAGGCAAGAAACAACA+AGG - chr3.3:93067730-93067749 MS.gene69418:CDS 40.0%
CATCAAGCAGAAGAAGAGTT+TGG - chr3.3:93067883-93067902 MS.gene69418:CDS 40.0%
CTTCGTTTGGATGTTCCAAA+AGG - chr3.3:93067772-93067791 MS.gene69418:CDS 40.0%
CTTCTTCTGCTTGATGAAGA+AGG + chr3.3:93067879-93067898 None:intergenic 40.0%
GTCTAGGCAAGAAACAACAA+GGG - chr3.3:93067731-93067750 MS.gene69418:CDS 40.0%
TGATCATCATGGTCTTCGTT+TGG - chr3.3:93067759-93067778 MS.gene69418:CDS 40.0%
! GTTTGGGTTTGATCATGACA+TGG - chr3.3:93067900-93067919 MS.gene69418:CDS 40.0%
!! TGTTTGATGAGTGCTGTTTG+AGG + chr3.3:93067691-93067710 None:intergenic 40.0%
! ATGTTGGTGAGAACAGAAGC+AGG - chr3.3:93067809-93067828 MS.gene69418:CDS 45.0%
! CAAGGGTACGTTGATCATCA+TGG - chr3.3:93067748-93067767 MS.gene69418:CDS 45.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 93067661 93067981 93067661 ID=MS.gene69418
chr3.3 mRNA 93067661 93067981 93067661 ID=MS.gene69418.t1;Parent=MS.gene69418
chr3.3 exon 93067661 93067981 93067661 ID=MS.gene69418.t1.exon1;Parent=MS.gene69418.t1
chr3.3 CDS 93067661 93067981 93067661 ID=cds.MS.gene69418.t1;Parent=MS.gene69418.t1
Gene Sequence

>MS.gene69418

ATGGCTATAAGAAAATCAACAAAACTTCCTCAAACAGCACTCATCAAACAAATCCTTAAAAGATGTTCAAGTCTAGGCAAGAAACAACAAGGGTACGTTGATCATCATGGTCTTCGTTTGGATGTTCCAAAAGGTCACTTTGTTGTATATGTTGGTGAGAACAGAAGCAGGTACATTGTTCCTATTGCTTTTCTAAGTAGACCAGAGTTTCAAAACCTTCTTCATCAAGCAGAAGAAGAGTTTGGGTTTGATCATGACATGGGTCTTACCATTCCATGCAACCAAGATGTTTTTGAGTCTCTTACTTCAATGCTAAGATAG

Protein sequence

>MS.gene69418.t1

MAIRKSTKLPQTALIKQILKRCSSLGKKQQGYVDHHGLRLDVPKGHFVVYVGENRSRYIVPIAFLSRPEFQNLLHQAEEEFGFDHDMGLTIPCNQDVFESLTSMLR