AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene23885

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23885.t1 MTR_5g029800 96.377 138 5 0 1 138 350 487 5.05e-93 277
MS.gene23885.t1 MTR_7g012120 83.333 138 23 0 1 138 356 493 6.30e-82 249
MS.gene23885.t1 MTR_5g067170 84.058 138 22 0 1 138 352 489 1.36e-79 243
MS.gene23885.t1 MTR_2g035020 81.481 135 25 0 1 135 354 488 4.19e-77 236
MS.gene23885.t1 MTR_2g035040 78.261 138 30 0 1 138 259 396 9.78e-77 233
MS.gene23885.t1 MTR_2g034990 77.536 138 31 0 1 138 354 491 1.10e-75 233
MS.gene23885.t1 MTR_4g117980 75.735 136 33 0 1 136 354 489 2.29e-71 221
MS.gene23885.t1 MTR_4g117960 72.464 138 38 0 1 138 353 490 5.16e-69 216
MS.gene23885.t1 MTR_4g117890 69.853 136 41 0 1 136 347 482 5.26e-65 205
MS.gene23885.t1 MTR_6g035185 71.212 132 37 1 1 132 356 486 1.29e-63 202
MS.gene23885.t1 MTR_8g032950 66.912 136 45 0 1 136 353 488 7.19e-61 194
MS.gene23885.t1 MTR_0536s0020 68.939 132 41 0 1 132 352 483 1.41e-60 194
MS.gene23885.t1 MTR_0536s0030 68.148 135 43 0 1 135 224 358 2.97e-58 184
MS.gene23885.t1 MTR_4g118000 66.667 138 46 0 1 138 339 476 3.33e-58 187
MS.gene23885.t1 MTR_4g117950 64.615 130 46 0 3 132 337 466 6.04e-57 184
MS.gene23885.t1 MTR_6g035265 65.909 132 44 1 1 132 347 477 2.57e-56 182
MS.gene23885.t1 MTR_0536s0010 62.222 135 51 0 1 135 349 483 5.11e-56 182
MS.gene23885.t1 MTR_7g070610 50.746 134 65 1 3 135 360 493 5.97e-41 142
MS.gene23885.t1 MTR_4g031800 53.226 124 58 0 3 126 347 470 7.01e-41 142
MS.gene23885.t1 MTR_7g070995 46.324 136 73 0 3 138 19 154 3.57e-40 132
MS.gene23885.t1 MTR_4g117970 67.045 88 29 0 20 107 337 424 2.70e-39 137
MS.gene23885.t1 MTR_4g485630 52.713 129 57 2 1 129 350 474 3.61e-39 137
MS.gene23885.t1 MTR_7g070740 48.120 133 69 0 3 135 358 490 5.94e-39 137
MS.gene23885.t1 MTR_7g071040 48.120 133 69 0 3 135 365 497 6.73e-39 137
MS.gene23885.t1 MTR_4g485640 53.659 123 56 1 3 125 542 663 9.67e-39 138
MS.gene23885.t1 MTR_7g070660 46.043 139 70 2 3 138 353 489 1.82e-38 135
MS.gene23885.t1 MTR_7g070780 45.185 135 74 0 1 135 356 490 1.77e-37 133
MS.gene23885.t1 MTR_5g039900 47.692 130 67 1 3 132 359 487 4.13e-37 132
MS.gene23885.t1 MTR_4g024020 45.802 131 70 1 3 132 361 491 7.27e-37 131
MS.gene23885.t1 MTR_7g039550 46.923 130 68 1 3 132 137 265 1.69e-36 126
MS.gene23885.t1 MTR_7g070910 45.588 136 74 0 3 138 359 494 2.68e-36 130
MS.gene23885.t1 MTR_5g016660 44.361 133 73 1 3 135 359 490 4.85e-36 129
MS.gene23885.t1 MTR_7g070860 45.865 133 66 2 3 132 337 466 5.21e-36 129
MS.gene23885.t1 MTR_5g040030 46.923 130 68 1 3 132 363 491 8.54e-36 128
MS.gene23885.t1 MTR_7g070800 45.113 133 67 2 3 132 350 479 2.46e-35 127
MS.gene23885.t1 MTR_4g108250 44.361 133 74 0 3 135 362 494 7.04e-35 126
MS.gene23885.t1 MTR_7g055710 48.438 128 60 2 3 127 358 482 8.57e-35 125
MS.gene23885.t1 MTR_6g035295 43.077 130 74 0 3 132 359 488 1.77e-34 125
MS.gene23885.t1 MTR_7g070940 44.615 130 72 0 3 132 347 476 2.20e-34 124
MS.gene23885.t1 MTR_7g070930 46.617 133 71 0 3 135 362 494 2.82e-34 124
MS.gene23885.t1 MTR_7g102460 45.312 128 70 0 3 130 359 486 3.28e-34 124
MS.gene23885.t1 MTR_7g102490 44.531 128 71 0 3 130 361 488 4.36e-34 124
MS.gene23885.t1 MTR_7g117405 48.062 129 66 1 1 128 352 480 5.55e-34 123
MS.gene23885.t1 MTR_7g102560 47.692 130 66 2 1 128 354 483 5.71e-34 123
MS.gene23885.t1 MTR_8g066610 46.565 131 65 2 1 131 355 480 6.19e-34 123
MS.gene23885.t1 MTR_4g485620 46.512 129 64 2 3 131 334 457 2.72e-33 121
MS.gene23885.t1 MTR_7g102550 46.154 130 66 2 1 127 356 484 4.69e-33 121
MS.gene23885.t1 MTR_7g070810 41.727 139 77 2 3 138 348 485 1.96e-32 119
MS.gene23885.t1 MTR_8g044140 45.385 130 70 1 3 132 324 452 1.17e-31 117
MS.gene23885.t1 MTR_1g040310 45.385 130 70 1 3 132 359 487 2.40e-31 116
MS.gene23885.t1 MTR_7g102450 46.154 130 64 4 3 128 344 471 7.60e-29 109
MS.gene23885.t1 MTR_1g062380 41.481 135 76 1 1 132 363 497 8.70e-29 109
MS.gene23885.t1 MTR_5g045960 44.275 131 69 3 1 128 356 485 4.67e-28 107
MS.gene23885.t1 MTR_5g045970 39.259 135 79 1 1 132 362 496 1.35e-27 106
MS.gene23885.t1 MTR_7g102520 41.481 135 78 1 1 134 360 494 2.08e-25 100
MS.gene23885.t1 MTR_6g014310 39.370 127 63 2 2 128 368 480 3.60e-25 99.4
MS.gene23885.t1 MTR_1g107285 39.231 130 72 3 1 130 343 465 2.17e-24 97.4
MS.gene23885.t1 MTR_1g107375 38.346 133 72 3 2 134 337 459 5.46e-24 96.3
MS.gene23885.t1 MTR_7g071050 41.441 111 65 0 3 113 314 424 5.76e-24 95.9
MS.gene23885.t1 MTR_1g029540 42.308 130 67 3 1 130 340 461 1.07e-23 95.1
MS.gene23885.t1 MTR_7g011470 40.157 127 62 3 2 128 349 461 2.14e-23 94.4
MS.gene23885.t1 MTR_6g014190 36.220 127 67 2 2 128 174 286 2.17e-23 92.4
MS.gene23885.t1 MTR_7g011470 40.157 127 62 3 2 128 353 465 2.18e-23 94.4
MS.gene23885.t1 MTR_8g083290 39.844 128 70 2 1 128 343 463 4.53e-23 93.6
MS.gene23885.t1 MTR_1g107325 37.209 129 73 2 2 130 234 354 4.59e-23 92.8
MS.gene23885.t1 MTR_2g040530 37.984 129 71 3 2 130 347 466 5.66e-23 93.2
MS.gene23885.t1 MTR_3g084520 39.062 128 69 1 1 128 354 472 8.71e-23 92.8
MS.gene23885.t1 MTR_4g008630 40.769 130 69 3 1 130 343 464 1.01e-22 92.4
MS.gene23885.t1 MTR_6g014170 39.370 127 63 3 2 128 349 461 1.53e-22 92.0
MS.gene23885.t1 MTR_6g013990 37.795 127 65 3 2 128 365 477 2.56e-22 91.7
MS.gene23885.t1 MTR_8g007585 37.795 127 65 2 2 128 279 391 2.88e-22 90.9
MS.gene23885.t1 MTR_6g014270 39.370 127 63 3 2 128 366 478 3.24e-22 91.3
MS.gene23885.t1 MTR_5g090620 37.795 127 75 2 2 128 353 475 3.38e-22 91.3
MS.gene23885.t1 MTR_5g098930 37.984 129 74 4 1 128 344 467 4.61e-22 90.9
MS.gene23885.t1 MTR_6g014300 38.583 127 64 3 2 128 353 465 5.71e-22 90.5
MS.gene23885.t1 MTR_5g090660 36.434 129 76 4 1 128 349 472 6.08e-22 90.5
MS.gene23885.t1 MTR_1g107350 37.209 129 73 2 2 130 350 470 6.74e-22 90.5
MS.gene23885.t1 MTR_8g012635 42.500 120 59 3 2 121 355 464 7.74e-22 90.1
MS.gene23885.t1 MTR_3g084530 38.281 128 70 1 1 128 354 472 7.88e-22 90.1
MS.gene23885.t1 MTR_8g090095 37.692 130 73 3 1 130 360 481 8.42e-22 90.1
MS.gene23885.t1 MTR_8g064870 39.062 128 70 3 2 129 355 474 1.01e-21 89.7
MS.gene23885.t1 MTR_6g014050 39.370 127 63 3 2 128 368 480 1.11e-21 89.7
MS.gene23885.t1 MTR_6g013920 37.008 127 66 2 2 128 366 478 1.31e-21 89.7
MS.gene23885.t1 MTR_6g014220 38.583 127 64 3 2 128 365 477 1.32e-21 89.4
MS.gene23885.t1 MTR_5g072860 37.500 136 75 3 1 135 344 470 1.38e-21 89.4
MS.gene23885.t1 MTR_0477s0010 33.835 133 73 3 2 134 204 321 1.71e-21 87.8
MS.gene23885.t1 MTR_6g014020 37.008 127 66 3 2 128 367 479 1.88e-21 89.0
MS.gene23885.t1 MTR_2g046820 35.659 129 74 3 2 130 345 464 1.92e-21 89.0
MS.gene23885.t1 MTR_5g090670 36.719 128 75 4 2 128 354 476 2.04e-21 89.0
MS.gene23885.t1 MTR_8g009050 39.516 124 65 3 1 124 349 462 2.06e-21 89.0
MS.gene23885.t1 MTR_5g058320 38.583 127 64 3 2 128 352 464 2.18e-21 89.0
MS.gene23885.t1 MTR_8g008990 40.171 117 60 3 1 117 351 457 2.40e-21 89.0
MS.gene23885.t1 MTR_3g069710 41.221 131 63 3 2 132 339 455 2.73e-21 88.6
MS.gene23885.t1 MTR_6g038240 36.923 130 68 3 1 128 337 454 2.83e-21 88.6
MS.gene23885.t1 MTR_8g009055 41.026 117 59 3 1 117 349 455 3.21e-21 88.6
MS.gene23885.t1 MTR_1g019510 39.516 124 65 4 1 124 346 459 3.65e-21 88.2
MS.gene23885.t1 MTR_2086s0010 33.858 127 70 2 2 128 59 171 4.27e-21 84.0
MS.gene23885.t1 MTR_1996s0010 33.858 127 70 2 2 128 59 171 4.27e-21 84.0
MS.gene23885.t1 MTR_2g046750 35.659 129 74 3 2 130 348 467 5.42e-21 87.8
MS.gene23885.t1 MTR_3g049970 36.719 128 73 2 2 129 351 470 6.43e-21 87.4
MS.gene23885.t1 MTR_0288s0020 37.008 127 66 2 2 128 348 460 6.89e-21 87.4
MS.gene23885.t1 MTR_3g479520 36.220 127 67 2 2 128 370 482 7.01e-21 87.4
MS.gene23885.t1 MTR_1g107365 37.209 129 71 2 2 130 375 493 7.33e-21 87.4
MS.gene23885.t1 MTR_6g014200 38.583 127 64 3 2 128 364 476 8.36e-21 87.4
MS.gene23885.t1 MTR_6g013450 38.583 127 64 3 2 128 368 480 8.81e-21 87.0
MS.gene23885.t1 MTR_3g008010 37.008 127 66 3 2 128 365 477 1.03e-20 87.0
MS.gene23885.t1 MTR_6g014250 36.220 127 67 3 2 128 365 477 1.09e-20 87.0
MS.gene23885.t1 MTR_1g107360 34.109 129 77 2 2 130 343 463 1.34e-20 86.7
MS.gene23885.t1 MTR_6g011340 39.370 127 63 3 2 128 367 479 1.35e-20 86.7
MS.gene23885.t1 MTR_6g014040 37.008 127 66 2 2 128 368 480 1.57e-20 86.7
MS.gene23885.t1 MTR_6g013900 36.220 127 67 2 2 128 366 478 1.81e-20 86.3
MS.gene23885.t1 MTR_4g094920 39.370 127 67 3 2 128 363 479 1.97e-20 86.3
MS.gene23885.t1 MTR_5g090700 38.281 128 73 4 2 128 354 476 2.38e-20 85.9
MS.gene23885.t1 MTR_1g107380 36.220 127 71 2 2 128 356 472 2.42e-20 85.9
MS.gene23885.t1 MTR_5g090630 36.719 128 75 4 2 128 343 465 2.60e-20 85.9
MS.gene23885.t1 MTR_6g013960 36.220 127 67 3 2 128 367 479 2.74e-20 85.9
MS.gene23885.t1 MTR_5g090580 37.500 128 74 4 2 128 352 474 5.70e-20 84.7
MS.gene23885.t1 MTR_8g012650 41.379 116 58 3 2 117 355 460 6.14e-20 84.7
MS.gene23885.t1 MTR_7g070870 32.374 139 66 2 3 138 355 468 6.18e-20 84.7
MS.gene23885.t1 MTR_6g014187 38.583 127 64 3 2 128 367 479 7.11e-20 84.7
MS.gene23885.t1 MTR_6g014150 36.220 127 67 3 2 128 364 476 7.50e-20 84.7
MS.gene23885.t1 MTR_8g012630 39.837 123 64 3 2 124 299 411 8.43e-20 84.3
MS.gene23885.t1 MTR_5g019580 34.959 123 72 3 2 124 360 474 9.00e-20 84.3
MS.gene23885.t1 MTR_3g084540 35.821 134 74 2 1 134 354 475 1.02e-19 84.3
MS.gene23885.t1 MTR_5g019580 34.959 123 72 3 2 124 384 498 1.02e-19 84.3
MS.gene23885.t1 MTR_4g095008 37.795 127 69 2 2 128 348 464 1.20e-19 84.0
MS.gene23885.t1 MTR_8g059425 36.220 127 67 3 2 128 365 477 1.35e-19 84.0
MS.gene23885.t1 MTR_1g019520 36.641 131 73 3 1 131 95 215 1.63e-19 80.9
MS.gene23885.t1 MTR_1g032490 37.405 131 74 3 2 132 352 474 2.52e-19 83.2
MS.gene23885.t1 MTR_5g090610 35.156 128 77 4 3 129 339 461 2.91e-19 82.8
MS.gene23885.t1 MTR_5g066390 34.646 127 69 2 2 128 102 214 3.24e-19 80.1
MS.gene23885.t1 MTR_5g075440 31.818 132 82 2 1 131 334 458 3.32e-19 82.8
MS.gene23885.t1 MTR_6g014290 34.646 127 69 3 2 128 365 477 3.51e-19 82.8
MS.gene23885.t1 MTR_8g009063 38.710 124 66 4 1 124 356 469 3.75e-19 82.4
MS.gene23885.t1 MTR_8g083280 35.156 128 76 1 1 128 341 461 5.00e-19 82.4
MS.gene23885.t1 MTR_5g072810 36.641 131 73 3 1 128 330 453 5.44e-19 82.0
MS.gene23885.t1 MTR_1g107315 39.062 128 70 3 2 129 350 469 5.91e-19 82.0
MS.gene23885.t1 MTR_6g488280 35.484 124 71 3 1 124 346 460 6.89e-19 81.6
MS.gene23885.t1 MTR_0428s0010 35.484 124 71 3 1 124 346 460 6.89e-19 81.6
MS.gene23885.t1 MTR_4g064987 39.231 130 63 4 2 131 333 446 7.92e-19 81.6
MS.gene23885.t1 MTR_7g070760 57.627 59 25 0 3 61 147 205 7.95e-19 79.0
MS.gene23885.t1 MTR_4g064987 39.231 130 63 4 2 131 339 452 8.03e-19 81.6
MS.gene23885.t1 MTR_8g074550 34.146 123 71 2 1 121 367 481 8.33e-19 81.6
MS.gene23885.t1 MTR_7g080950 33.594 128 75 2 1 128 330 447 1.10e-18 81.3
MS.gene23885.t1 MTR_4g094220 34.375 128 70 2 2 129 366 479 1.46e-18 80.9
MS.gene23885.t1 MTR_5g070040 38.095 126 67 3 1 126 350 464 2.18e-18 80.5
MS.gene23885.t1 MTR_7g470610 57.895 57 24 0 3 59 215 271 2.45e-18 79.0
MS.gene23885.t1 MTR_7g070583 57.895 57 24 0 3 59 215 271 2.45e-18 79.0
MS.gene23885.t1 MTR_8g027885 34.959 123 70 3 2 124 356 468 4.46e-18 79.7
MS.gene23885.t1 MTR_8g027870 34.959 123 70 3 2 124 356 468 4.46e-18 79.7
MS.gene23885.t1 MTR_8g006730 34.677 124 72 2 1 124 348 462 4.71e-18 79.3
MS.gene23885.t1 MTR_8g043470 34.646 127 69 2 2 128 265 377 4.81e-18 79.0
MS.gene23885.t1 MTR_6g014240 35.433 127 68 3 2 128 334 446 4.86e-18 79.3
MS.gene23885.t1 MTR_3g479490 32.558 129 73 2 2 130 361 475 5.06e-18 79.3
MS.gene23885.t1 MTR_5g072830 34.351 131 76 4 1 128 325 448 6.35e-18 79.0
MS.gene23885.t1 MTR_6g038300 35.938 128 72 2 1 128 338 455 6.38e-18 79.0
MS.gene23885.t1 MTR_5g090600 36.364 132 70 4 2 128 331 453 6.52e-18 79.0
MS.gene23885.t1 MTR_3g479610 33.858 127 70 2 2 128 200 312 7.66e-18 78.2
MS.gene23885.t1 MTR_0184s0040 30.827 133 82 2 1 133 363 485 9.60e-18 78.6
MS.gene23885.t1 MTR_0078s0190 30.827 133 82 2 1 133 363 485 9.60e-18 78.6
MS.gene23885.t1 MTR_3g079480 33.858 127 70 2 2 128 376 488 1.01e-17 78.6
MS.gene23885.t1 MTR_8g012730 35.484 124 70 2 1 124 191 304 1.08e-17 77.4
MS.gene23885.t1 MTR_6g023665 33.871 124 73 2 1 124 353 467 1.23e-17 78.2
MS.gene23885.t1 MTR_0184s0030 42.241 116 57 4 2 117 351 456 1.34e-17 78.2
MS.gene23885.t1 MTR_2g008210 36.220 127 68 3 2 128 363 476 1.51e-17 78.2
MS.gene23885.t1 MTR_6g014000 35.833 120 63 2 2 121 43 148 1.58e-17 78.2
MS.gene23885.t1 MTR_4g485590 53.333 60 28 0 3 62 327 386 1.69e-17 77.8
MS.gene23885.t1 MTR_5g072840 34.109 129 79 2 1 128 325 448 2.05e-17 77.8
MS.gene23885.t1 MTR_6g013440 34.646 127 69 3 2 128 368 480 2.19e-17 77.4
MS.gene23885.t1 MTR_8g006710 33.333 129 77 2 1 129 347 466 2.26e-17 77.4
MS.gene23885.t1 MTR_7g117170 32.520 123 73 3 2 124 359 471 2.30e-17 77.4
MS.gene23885.t1 MTR_0891s0010 32.283 127 72 2 2 128 177 289 2.37e-17 76.6
MS.gene23885.t1 MTR_8g466240 34.615 130 72 2 3 132 341 457 2.53e-17 77.4
MS.gene23885.t1 MTR_3g009490 36.508 126 71 3 1 126 70 186 2.55e-17 74.7
MS.gene23885.t1 MTR_8g012745 36.842 133 73 3 2 134 353 474 2.83e-17 77.4
MS.gene23885.t1 MTR_7g046490 35.200 125 71 3 1 125 346 460 2.87e-17 77.4
MS.gene23885.t1 MTR_3g031450 33.333 129 78 2 1 128 330 451 4.00e-17 76.6
MS.gene23885.t1 MTR_5g072820 34.884 129 78 2 1 128 325 448 5.14e-17 76.6
MS.gene23885.t1 MTR_5g070090 33.846 130 73 3 1 128 343 461 6.20e-17 76.3
MS.gene23885.t1 MTR_7g013220 33.594 128 72 3 2 129 337 451 6.45e-17 76.3
MS.gene23885.t1 MTR_8g056740 57.143 56 24 0 3 58 247 302 6.47e-17 75.9
MS.gene23885.t1 MTR_5g016480 33.858 127 74 2 2 128 354 470 6.80e-17 76.3
MS.gene23885.t1 MTR_3g009510 34.400 125 73 2 1 125 358 473 7.08e-17 76.3
MS.gene23885.t1 MTR_3g069690 35.385 130 71 2 2 131 336 452 7.55e-17 75.9
MS.gene23885.t1 MTR_8g077590 36.585 123 68 2 2 124 350 462 8.52e-17 75.9
MS.gene23885.t1 MTR_8g008970 37.097 124 68 4 1 124 671 784 8.55e-17 75.9
MS.gene23885.t1 MTR_8g008970 36.290 124 69 4 1 124 347 460 7.62e-16 73.2
MS.gene23885.t1 MTR_4g082820 33.594 128 74 3 2 129 348 464 8.66e-17 75.9
MS.gene23885.t1 MTR_6g078320 35.345 116 64 3 1 116 363 467 9.15e-17 75.9
MS.gene23885.t1 MTR_5g087620 26.923 130 86 1 1 130 371 491 1.10e-16 75.5
MS.gene23885.t1 MTR_5g031840 32.031 128 72 2 2 129 350 462 1.40e-16 75.1
MS.gene23885.t1 MTR_6g033660 32.787 122 72 2 3 124 348 459 1.93e-16 74.7
MS.gene23885.t1 MTR_8g088560 33.846 130 76 3 1 130 340 459 1.98e-16 74.7
MS.gene23885.t1 MTR_3g031400 32.558 129 79 2 1 128 328 449 2.03e-16 74.7
MS.gene23885.t1 MTR_8g009067 36.000 125 70 4 1 125 347 461 2.13e-16 74.7
MS.gene23885.t1 MTR_5g031860 32.031 128 72 2 2 129 358 470 2.49e-16 74.7
MS.gene23885.t1 MTR_2g059240 34.375 128 72 3 1 128 353 468 3.35e-16 74.3
MS.gene23885.t1 MTR_6g014185 33.594 128 70 3 2 128 231 344 3.53e-16 73.9
MS.gene23885.t1 MTR_5g031830 32.031 128 72 2 2 129 359 471 4.55e-16 73.9
MS.gene23885.t1 MTR_8g064880 38.542 96 51 2 2 97 357 444 5.90e-16 73.6
MS.gene23885.t1 MTR_8g009840 36.800 125 65 4 1 124 410 521 1.12e-15 72.8
MS.gene23885.t1 MTR_8g006260 34.188 117 67 3 1 117 352 458 1.25e-15 72.4
MS.gene23885.t1 MTR_8g009067 36.000 125 70 4 1 125 229 343 1.47e-15 72.0
MS.gene23885.t1 MTR_6g005600 34.351 131 76 4 1 131 350 470 2.49e-15 71.6
MS.gene23885.t1 MTR_0009s0240 32.061 131 77 3 1 131 343 461 2.64e-15 71.6
MS.gene23885.t1 MTR_5g027210 38.679 106 52 4 3 108 371 463 2.87e-15 71.6
MS.gene23885.t1 MTR_8g009073 36.290 124 69 4 1 124 347 460 3.06e-15 71.6
MS.gene23885.t1 MTR_7g013200 32.000 125 72 3 2 126 326 437 3.95e-15 71.2
MS.gene23885.t1 MTR_7g013240 32.000 125 72 3 2 126 326 437 5.09e-15 70.9
MS.gene23885.t1 MTR_7g080900 27.344 128 84 1 1 128 337 455 5.49e-15 70.9
MS.gene23885.t1 MTR_4g128720 33.600 125 70 3 1 125 341 452 6.10e-15 70.5
MS.gene23885.t1 MTR_6g033725 33.065 124 69 3 3 124 346 457 1.15e-14 69.7
MS.gene23885.t1 MTR_6g033675 32.258 124 74 2 1 124 347 460 1.18e-14 69.7
MS.gene23885.t1 MTR_6g033625 30.233 129 76 3 3 131 349 463 1.22e-14 69.7
MS.gene23885.t1 MTR_8g009073 36.290 124 69 4 1 124 218 331 1.23e-14 69.3
MS.gene23885.t1 MTR_2g098430 31.579 114 70 1 1 114 354 459 1.41e-14 69.7
MS.gene23885.t1 MTR_7g013260 32.258 124 71 3 2 125 327 437 1.67e-14 69.3
MS.gene23885.t1 MTR_6g033615 30.534 131 78 3 3 130 335 455 1.78e-14 69.3
MS.gene23885.t1 MTR_8g071070 33.333 129 74 3 3 131 355 471 2.72e-14 68.6
MS.gene23885.t1 MTR_6g038220 33.884 121 66 3 3 121 338 446 3.11e-14 68.6
MS.gene23885.t1 MTR_0078s0060 28.358 134 85 3 1 133 347 470 3.30e-14 68.6
MS.gene23885.t1 MTR_0036s0220 34.375 128 68 4 2 128 365 477 3.31e-14 68.6
MS.gene23885.t1 MTR_5g035580 33.333 126 74 3 1 126 336 451 3.91e-14 68.2
MS.gene23885.t1 MTR_5g464810 34.884 129 66 4 2 128 365 477 4.34e-14 68.2
MS.gene23885.t1 MTR_5g064240 34.884 129 66 4 2 128 365 477 4.34e-14 68.2
MS.gene23885.t1 MTR_5g464760 34.884 129 66 4 2 128 367 479 4.89e-14 68.2
MS.gene23885.t1 MTR_6g038200 33.884 121 66 3 3 121 339 447 5.00e-14 67.8
MS.gene23885.t1 MTR_8g465670 34.328 134 65 4 1 125 348 467 5.92e-14 67.8
MS.gene23885.t1 MTR_5g035560 32.031 128 77 3 1 128 334 451 8.47e-14 67.4
MS.gene23885.t1 MTR_4g128690 35.200 125 68 3 1 125 338 449 8.51e-14 67.4
MS.gene23885.t1 MTR_7g080935 30.469 128 79 2 1 128 335 452 1.05e-13 67.0
MS.gene23885.t1 MTR_7g080940 30.469 128 79 2 1 128 335 452 1.29e-13 66.6
MS.gene23885.t1 MTR_6g038230 32.520 123 69 3 1 121 337 447 2.83e-13 65.9
MS.gene23885.t1 MTR_8g006270 30.827 133 82 3 1 133 346 468 4.77e-13 65.1
MS.gene23885.t1 MTR_7g047030 27.612 134 86 3 1 133 348 471 9.85e-13 64.3
MS.gene23885.t1 MTR_7g047270 27.612 134 86 3 1 133 348 471 9.85e-13 64.3
MS.gene23885.t1 MTR_4g082810 55.556 54 23 1 2 55 350 402 2.24e-12 63.2
MS.gene23885.t1 MTR_3g479470 30.159 126 74 2 2 127 367 478 2.44e-12 63.2
MS.gene23885.t1 MTR_7g067120 35.455 110 55 5 1 106 314 411 2.46e-12 63.2
MS.gene23885.t1 MTR_8g006220 34.815 135 64 4 1 125 355 475 3.66e-12 62.8
MS.gene23885.t1 MTR_6g014160 58.974 39 16 0 2 40 319 357 5.45e-12 62.0
MS.gene23885.t1 MTR_0078s0010 27.273 132 85 3 1 131 348 469 7.08e-12 62.0
MS.gene23885.t1 MTR_7g013180 30.952 126 74 3 2 127 334 446 9.90e-12 61.2
MS.gene23885.t1 MTR_5g004940 27.692 130 65 3 2 130 278 379 1.41e-11 60.8
MS.gene23885.t1 MTR_0475s0030 45.283 53 29 0 7 59 11 63 3.26e-11 56.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene23885.t1 AT2G36760 51.969 127 60 1 3 128 362 488 1.11e-37 134
MS.gene23885.t1 AT2G15490 50.781 128 57 2 1 128 356 477 2.28e-37 132
MS.gene23885.t1 AT2G15490 50.781 128 57 2 1 128 359 480 2.59e-37 132
MS.gene23885.t1 AT2G36790 47.692 130 67 1 3 131 361 490 4.88e-37 132
MS.gene23885.t1 AT2G36770 48.062 129 66 1 1 128 360 488 6.58e-37 131
MS.gene23885.t1 AT2G15480 47.445 137 58 2 1 128 359 490 4.64e-36 129
MS.gene23885.t1 AT2G15480 49.219 128 59 2 1 128 359 480 6.47e-36 129
MS.gene23885.t1 AT2G36780 46.715 137 62 3 1 131 360 491 1.11e-35 128
MS.gene23885.t1 AT2G36750 46.923 130 68 1 3 131 357 486 5.28e-35 126
MS.gene23885.t1 AT2G36800 46.154 130 69 1 3 131 361 490 1.47e-34 125
MS.gene23885.t1 AT3G53160 40.310 129 76 1 1 128 354 482 6.73e-29 109
MS.gene23885.t1 AT4G34131 46.875 128 60 4 1 127 358 478 1.16e-28 109
MS.gene23885.t1 AT4G34138 42.424 132 68 2 1 132 359 482 2.91e-28 108
MS.gene23885.t1 AT3G53150 43.796 137 66 3 3 128 373 509 8.99e-26 101
MS.gene23885.t1 AT3G46660 42.308 130 61 3 2 131 343 458 3.22e-25 99.8
MS.gene23885.t1 AT3G46670 40.000 130 64 2 2 131 336 451 1.86e-24 97.4
MS.gene23885.t1 AT4G34135 45.669 127 65 2 1 127 358 480 5.36e-24 96.3
MS.gene23885.t1 AT2G30150 36.765 136 70 3 1 131 315 439 8.17e-23 92.8
MS.gene23885.t1 AT2G30150 36.765 136 70 3 1 131 331 455 8.81e-23 92.8
MS.gene23885.t1 AT1G78270 39.394 132 57 4 2 128 367 480 9.73e-23 92.8
MS.gene23885.t1 AT3G46650 42.149 121 56 3 1 121 319 425 6.16e-22 90.5
MS.gene23885.t1 AT2G30140 35.659 129 75 2 1 128 329 450 8.65e-22 90.1
MS.gene23885.t1 AT2G30140 35.659 129 75 2 1 128 330 451 8.69e-22 90.1
MS.gene23885.t1 AT1G22340 40.000 130 59 4 2 128 368 481 1.12e-21 89.7
MS.gene23885.t1 AT1G22400 37.681 138 69 4 2 138 368 489 1.46e-21 89.4
MS.gene23885.t1 AT1G07250 36.719 128 73 2 1 128 353 472 1.57e-21 89.4
MS.gene23885.t1 AT4G15260 35.606 132 74 4 1 128 230 354 6.79e-21 87.0
MS.gene23885.t1 AT5G26310 35.556 135 74 3 2 134 350 473 7.16e-21 87.4
MS.gene23885.t1 AT3G46680 37.302 126 65 2 1 126 336 447 1.24e-20 86.7
MS.gene23885.t1 AT4G15280 35.938 128 78 2 1 128 350 473 1.82e-20 86.3
MS.gene23885.t1 AT4G15280 35.938 128 78 2 1 128 382 505 1.93e-20 86.3
MS.gene23885.t1 AT3G21760 35.156 128 79 2 3 130 359 482 2.10e-20 86.3
MS.gene23885.t1 AT5G38010 39.370 127 63 3 2 128 341 453 3.83e-20 85.5
MS.gene23885.t1 AT5G59580 37.879 132 66 4 1 131 334 450 4.95e-20 85.1
MS.gene23885.t1 AT5G05880 37.795 127 65 2 2 128 336 448 6.62e-20 84.7
MS.gene23885.t1 AT2G36970 34.109 129 73 2 1 129 355 471 7.64e-20 84.7
MS.gene23885.t1 AT1G22360 36.719 128 66 3 2 128 364 477 8.63e-20 84.3
MS.gene23885.t1 AT2G18570 35.772 123 70 3 1 122 346 460 1.01e-19 84.3
MS.gene23885.t1 AT3G21790 34.615 130 82 1 1 130 354 480 1.32e-19 84.0
MS.gene23885.t1 AT2G29740 38.462 117 64 2 1 117 355 463 1.61e-19 83.6
MS.gene23885.t1 AT5G59590 36.719 128 67 2 1 128 336 449 1.80e-19 83.6
MS.gene23885.t1 AT5G05870 35.938 128 68 3 1 128 341 454 1.90e-19 83.6
MS.gene23885.t1 AT1G22380 36.719 128 66 3 2 128 367 480 1.98e-19 83.6
MS.gene23885.t1 AT1G07260 35.156 128 75 2 1 128 352 471 2.08e-19 83.2
MS.gene23885.t1 AT3G46700 36.434 129 68 3 1 129 331 445 2.45e-19 83.2
MS.gene23885.t1 AT3G21800 32.308 130 85 1 1 130 351 477 4.32e-19 82.4
MS.gene23885.t1 AT2G18560 31.707 123 75 2 1 122 256 370 4.54e-19 82.0
MS.gene23885.t1 AT5G17040 32.824 131 75 2 1 131 325 442 1.38e-18 80.9
MS.gene23885.t1 AT3G46720 39.062 128 64 3 2 129 328 441 1.51e-18 80.9
MS.gene23885.t1 AT3G50740 35.878 131 74 4 2 131 355 476 1.61e-18 80.9
MS.gene23885.t1 AT5G17030 34.375 128 71 2 1 128 341 455 1.93e-18 80.5
MS.gene23885.t1 AT2G29750 37.607 117 64 3 1 117 355 462 2.08e-18 80.5
MS.gene23885.t1 AT4G14090 36.800 125 70 2 3 127 339 454 2.34e-18 80.5
MS.gene23885.t1 AT1G07240 35.156 128 79 2 1 128 352 475 2.90e-18 80.1
MS.gene23885.t1 AT5G14860 33.333 132 80 3 2 132 355 479 3.54e-18 79.7
MS.gene23885.t1 AT5G17040 32.824 131 75 2 1 131 223 340 4.82e-18 79.0
MS.gene23885.t1 AT2G29730 33.824 136 80 3 1 136 342 467 4.91e-18 79.3
MS.gene23885.t1 AT2G23250 38.583 127 69 3 2 128 318 435 7.02e-18 79.0
MS.gene23885.t1 AT2G26480 37.008 127 66 3 2 128 333 445 1.32e-17 78.2
MS.gene23885.t1 AT3G21780 34.375 128 80 2 1 128 345 468 1.55e-17 78.2
MS.gene23885.t1 AT2G16890 34.058 138 78 5 2 138 347 472 1.62e-17 78.2
MS.gene23885.t1 AT5G05860 33.858 127 70 3 2 128 335 447 2.33e-17 77.4
MS.gene23885.t1 AT3G21750 33.594 128 81 2 1 128 345 468 2.78e-17 77.4
MS.gene23885.t1 AT3G16520 35.200 125 68 2 1 125 345 456 3.43e-17 77.0
MS.gene23885.t1 AT2G29710 32.812 128 79 2 1 128 342 462 3.49e-17 77.0
MS.gene23885.t1 AT3G21560 34.815 135 76 4 2 136 354 476 3.52e-17 77.0
MS.gene23885.t1 AT5G38040 36.220 127 67 3 2 128 337 449 3.54e-17 77.0
MS.gene23885.t1 AT2G31750 34.351 131 76 3 1 130 335 456 4.02e-17 77.0
MS.gene23885.t1 AT2G31750 34.351 131 76 3 1 130 335 456 4.17e-17 77.0
MS.gene23885.t1 AT5G66690 34.091 132 74 3 2 131 350 470 5.43e-17 76.6
MS.gene23885.t1 AT3G46690 35.200 125 67 2 1 125 336 446 7.03e-17 76.3
MS.gene23885.t1 AT5G12890 36.134 119 65 2 1 117 361 470 8.30e-17 75.9
MS.gene23885.t1 AT2G23260 37.795 127 70 3 2 128 336 453 1.43e-16 75.1
MS.gene23885.t1 AT5G05890 34.921 126 68 2 3 128 341 452 1.52e-16 75.1
MS.gene23885.t1 AT4G01070 32.258 124 73 4 2 125 351 463 1.76e-16 75.1
MS.gene23885.t1 AT3G11340 37.795 127 65 3 2 128 332 444 1.98e-16 74.7
MS.gene23885.t1 AT2G15490 48.810 84 37 2 45 128 189 266 2.04e-16 73.6
MS.gene23885.t1 AT4G15500 33.588 131 71 4 2 128 344 462 4.08e-16 73.9
MS.gene23885.t1 AT5G17050 33.594 128 72 3 1 128 342 456 4.26e-16 73.9
MS.gene23885.t1 AT4G15550 33.333 126 77 2 2 127 354 472 4.53e-16 73.9
MS.gene23885.t1 AT2G43840 31.783 129 79 2 1 129 328 447 7.69e-16 73.2
MS.gene23885.t1 AT2G43840 31.783 129 79 2 1 129 328 447 7.69e-16 73.2
MS.gene23885.t1 AT1G06000 34.109 129 67 2 3 128 320 433 9.54e-16 72.8
MS.gene23885.t1 AT1G73880 35.821 134 68 3 1 131 351 469 1.12e-15 72.8
MS.gene23885.t1 AT1G01420 32.500 120 70 3 2 121 351 459 1.83e-15 72.0
MS.gene23885.t1 AT1G01420 32.500 120 70 3 2 121 354 462 1.83e-15 72.0
MS.gene23885.t1 AT1G10400 32.283 127 75 3 2 127 345 461 2.42e-15 71.6
MS.gene23885.t1 AT1G22360 33.594 128 58 3 2 128 364 465 2.44e-15 71.6
MS.gene23885.t1 AT3G55700 32.031 128 73 3 1 128 337 450 4.14e-15 71.2
MS.gene23885.t1 AT2G43820 31.008 129 80 3 1 129 328 447 5.59e-15 70.9
MS.gene23885.t1 AT3G16520 49.180 61 31 0 1 61 345 405 6.14e-15 70.5
MS.gene23885.t1 AT3G16520 49.180 61 31 0 1 61 345 405 6.17e-15 70.5
MS.gene23885.t1 AT4G15490 32.558 129 75 4 2 128 348 466 7.01e-15 70.5
MS.gene23885.t1 AT1G05680 33.333 126 74 3 1 126 335 450 8.86e-15 70.1
MS.gene23885.t1 AT3G55710 36.434 129 66 4 1 128 341 454 9.02e-15 70.1
MS.gene23885.t1 AT5G03490 30.303 132 80 4 1 131 345 465 9.03e-15 70.1
MS.gene23885.t1 AT1G05675 33.333 126 74 3 1 126 335 450 1.24e-14 69.7
MS.gene23885.t1 AT4G15480 32.824 131 72 4 2 128 360 478 1.35e-14 69.7
MS.gene23885.t1 AT4G36770 29.091 110 67 2 2 111 348 446 1.82e-14 69.3
MS.gene23885.t1 AT5G05900 33.858 127 70 2 2 128 335 447 2.12e-14 68.9
MS.gene23885.t1 AT2G31790 33.884 121 70 3 1 121 339 449 4.62e-14 68.2
MS.gene23885.t1 AT1G05560 32.812 128 75 3 1 128 335 451 9.81e-14 67.0
MS.gene23885.t1 AT1G05560 32.812 128 75 3 1 128 385 501 1.00e-13 67.0
MS.gene23885.t1 AT1G22370 32.031 128 72 3 2 128 192 305 3.46e-13 65.1
MS.gene23885.t1 AT1G30530 32.061 131 76 3 1 131 336 453 3.96e-13 65.5
MS.gene23885.t1 AT3G22250 33.333 129 65 4 1 128 352 460 4.05e-13 65.5
MS.gene23885.t1 AT1G22370 31.538 130 70 4 2 128 362 475 4.29e-13 65.5
MS.gene23885.t1 AT2G28080 34.677 124 66 3 1 124 358 466 6.21e-13 65.1
MS.gene23885.t1 AT1G05530 33.333 132 69 5 1 128 338 454 2.11e-12 63.5
MS.gene23885.t1 AT2G16890 36.000 75 48 0 2 76 347 421 4.32e-12 62.4
MS.gene23885.t1 AT5G49690 37.624 101 53 3 1 101 338 428 4.55e-12 62.4
MS.gene23885.t1 AT1G51210 42.105 57 33 0 1 57 341 397 7.92e-12 61.6
MS.gene23885.t1 AT1G01390 30.081 123 64 3 1 117 367 473 9.00e-12 61.6
MS.gene23885.t1 AT1G01390 30.081 123 64 3 1 117 350 456 9.03e-12 61.6
MS.gene23885.t1 AT1G24100 26.154 130 87 3 1 130 340 460 4.81e-11 59.3

Find 42 sgRNAs with CRISPR-Local

Find 46 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAACACAGGTCCGAGGAAT+TGG 0.351469 5.2:-18666858 MS.gene23885:CDS
AATGGTGTACAAATGGTAAT+GGG 0.408434 5.2:-18666815 MS.gene23885:CDS
GAATGGTGTACAAATGGTAA+TGG 0.441854 5.2:-18666816 MS.gene23885:CDS
ATTGAGCCACCCTGCGGTGG+GGG 0.442434 5.2:-18666988 MS.gene23885:CDS
GGGGATTTATGACACATTGT+GGG 0.461723 5.2:-18666968 MS.gene23885:CDS
AAGAAGTTGGTTGGCAGAGA+TGG 0.462617 5.2:-18666786 MS.gene23885:CDS
GAAGGCTATGAGGAGATTGA+TGG 0.476854 5.2:-18666757 MS.gene23885:CDS
GGGATTTATGACACATTGTG+GGG 0.479086 5.2:-18666967 MS.gene23885:CDS
TGACACGGCCATGTTATCAT+TGG 0.482738 5.2:+18666909 None:intergenic
GCAACAGAATGGTGTACAAA+TGG 0.496592 5.2:-18666822 MS.gene23885:CDS
ATTGTAGAGGCTGTTGGTGC+GGG 0.496767 5.2:-18666936 MS.gene23885:CDS
GGGGAGAGAAAGAAGTTGGT+TGG 0.504801 5.2:-18666795 MS.gene23885:CDS
AGACTACGTGCACGAGAGGT+TGG 0.507395 5.2:-18666708 MS.gene23885:CDS
ATGATAACATGGCCGTGTCA+TGG 0.528508 5.2:-18666906 MS.gene23885:CDS
ATGGCATAGAGAAGGCTATG+AGG 0.534762 5.2:-18666767 MS.gene23885:CDS
TAATGGGGAGAGAAAGAAGT+TGG 0.535187 5.2:-18666799 MS.gene23885:CDS
GATATTGAGCCACCCTGCGG+TGG 0.544528 5.2:-18666991 MS.gene23885:CDS
GGATTTATGACACATTGTGG+GGG 0.545846 5.2:-18666966 MS.gene23885:CDS
TGCACGAGAGGTTGGAGAGA+AGG 0.546757 5.2:-18666700 MS.gene23885:CDS
CGAGGAATTGGAGTAGAAGT+AGG 0.553159 5.2:-18666846 MS.gene23885:CDS
TTGAGCCACCCTGCGGTGGG+GGG 0.557342 5.2:-18666987 MS.gene23885:CDS
TAGAAGTAGGTGCAACAGAA+TGG 0.557594 5.2:-18666833 MS.gene23885:CDS
TACTCCTTTAATTAATCATG+TGG 0.559855 5.2:+18666591 None:intergenic
CGGGAGTTCCAATGATAACA+TGG 0.561694 5.2:-18666917 MS.gene23885:CDS
AACTCAATTGTAGAGGCTGT+TGG 0.566081 5.2:-18666942 MS.gene23885:CDS
CTACTTCTACTCCAATTCCT+CGG 0.570035 5.2:+18666847 None:intergenic
ATATTGAGCCACCCTGCGGT+GGG 0.570454 5.2:-18666990 MS.gene23885:CDS
AATTGTAGAGGCTGTTGGTG+CGG 0.570479 5.2:-18666937 MS.gene23885:CDS
TATTGAGCCACCCTGCGGTG+GGG 0.571806 5.2:-18666989 MS.gene23885:CDS
AACGAAATTAAAAGATTGAG+AGG 0.581049 5.2:-18666621 MS.gene23885:CDS
GCTAGACGAGCTGTTCAAGA+AGG 0.597267 5.2:-18666678 MS.gene23885:CDS
TGGCAGAGATGGCATAGAGA+AGG 0.615540 5.2:-18666775 MS.gene23885:CDS
AGACGAGCTGTTCAAGAAGG+TGG 0.622278 5.2:-18666675 MS.gene23885:CDS
AGATAACAAATTATTATGAG+AGG 0.629074 5.2:+18666650 None:intergenic
TATGAGACTACGTGCACGAG+AGG 0.638522 5.2:-18666712 MS.gene23885:CDS
ATGGTGTACAAATGGTAATG+GGG 0.653388 5.2:-18666814 MS.gene23885:CDS
CAACGAGAAACTAATAACAC+AGG 0.662863 5.2:-18666871 MS.gene23885:CDS
ATGAGGAGATTGATGGACGG+TGG 0.672534 5.2:-18666750 MS.gene23885:CDS
AATAAGTGATCTCCATGACA+CGG 0.683777 5.2:+18666894 None:intergenic
AAACTAATAACACAGGTCCG+AGG 0.690103 5.2:-18666864 MS.gene23885:CDS
GCTATGAGGAGATTGATGGA+CGG 0.696963 5.2:-18666753 MS.gene23885:CDS
TAAGATATTGAGCCACCCTG+CGG 0.735103 5.2:-18666994 MS.gene23885:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATAACAAATTATTATGAG+AGG + chr5.2:18666951-18666970 None:intergenic 20.0%
! AACGAAATTAAAAGATTGAG+AGG - chr5.2:18666977-18666996 MS.gene23885:CDS 25.0%
AATGGTGTACAAATGGTAAT+GGG - chr5.2:18666783-18666802 MS.gene23885:CDS 30.0%
AATAAGTGATCTCCATGACA+CGG + chr5.2:18666707-18666726 None:intergenic 35.0%
CAACGAGAAACTAATAACAC+AGG - chr5.2:18666727-18666746 MS.gene23885:CDS 35.0%
GAATGGTGTACAAATGGTAA+TGG - chr5.2:18666782-18666801 MS.gene23885:CDS 35.0%
! ATGGTGTACAAATGGTAATG+GGG - chr5.2:18666784-18666803 MS.gene23885:CDS 35.0%
AAACTAATAACACAGGTCCG+AGG - chr5.2:18666734-18666753 MS.gene23885:CDS 40.0%
AACTCAATTGTAGAGGCTGT+TGG - chr5.2:18666656-18666675 MS.gene23885:CDS 40.0%
CTACTTCTACTCCAATTCCT+CGG + chr5.2:18666754-18666773 None:intergenic 40.0%
GCAACAGAATGGTGTACAAA+TGG - chr5.2:18666776-18666795 MS.gene23885:CDS 40.0%
GGATTTATGACACATTGTGG+GGG - chr5.2:18666632-18666651 MS.gene23885:CDS 40.0%
GGGATTTATGACACATTGTG+GGG - chr5.2:18666631-18666650 MS.gene23885:CDS 40.0%
GGGGATTTATGACACATTGT+GGG - chr5.2:18666630-18666649 MS.gene23885:CDS 40.0%
TAATGGGGAGAGAAAGAAGT+TGG - chr5.2:18666799-18666818 MS.gene23885:CDS 40.0%
TAGAAGTAGGTGCAACAGAA+TGG - chr5.2:18666765-18666784 MS.gene23885:CDS 40.0%
AATTGTAGAGGCTGTTGGTG+CGG - chr5.2:18666661-18666680 MS.gene23885:CDS 45.0%
ATAACACAGGTCCGAGGAAT+TGG - chr5.2:18666740-18666759 MS.gene23885:CDS 45.0%
ATGATAACATGGCCGTGTCA+TGG - chr5.2:18666692-18666711 MS.gene23885:CDS 45.0%
ATGGCATAGAGAAGGCTATG+AGG - chr5.2:18666831-18666850 MS.gene23885:CDS 45.0%
CGAGGAATTGGAGTAGAAGT+AGG - chr5.2:18666752-18666771 MS.gene23885:CDS 45.0%
CGGGAGTTCCAATGATAACA+TGG - chr5.2:18666681-18666700 MS.gene23885:CDS 45.0%
GAAGGCTATGAGGAGATTGA+TGG - chr5.2:18666841-18666860 MS.gene23885:CDS 45.0%
GCTATGAGGAGATTGATGGA+CGG - chr5.2:18666845-18666864 MS.gene23885:CDS 45.0%
GGGGGATTTATGACACATTG+TGG - chr5.2:18666629-18666648 MS.gene23885:CDS 45.0%
TAAGATATTGAGCCACCCTG+CGG - chr5.2:18666604-18666623 MS.gene23885:CDS 45.0%
TGACACGGCCATGTTATCAT+TGG + chr5.2:18666692-18666711 None:intergenic 45.0%
TGGGGGAAACTCAATTGTAG+AGG - chr5.2:18666649-18666668 MS.gene23885:CDS 45.0%
! AAGAAGTTGGTTGGCAGAGA+TGG - chr5.2:18666812-18666831 MS.gene23885:CDS 45.0%
AGACGAGCTGTTCAAGAAGG+TGG - chr5.2:18666923-18666942 MS.gene23885:CDS 50.0%
ATTGTAGAGGCTGTTGGTGC+GGG - chr5.2:18666662-18666681 MS.gene23885:CDS 50.0%
GCTAGACGAGCTGTTCAAGA+AGG - chr5.2:18666920-18666939 MS.gene23885:CDS 50.0%
TATGAGACTACGTGCACGAG+AGG - chr5.2:18666886-18666905 MS.gene23885:CDS 50.0%
TGGCAGAGATGGCATAGAGA+AGG - chr5.2:18666823-18666842 MS.gene23885:CDS 50.0%
! ATGAGGAGATTGATGGACGG+TGG - chr5.2:18666848-18666867 MS.gene23885:CDS 50.0%
! GGGGAGAGAAAGAAGTTGGT+TGG - chr5.2:18666803-18666822 MS.gene23885:CDS 50.0%
AGACTACGTGCACGAGAGGT+TGG - chr5.2:18666890-18666909 MS.gene23885:CDS 55.0%
ATATTGAGCCACCCTGCGGT+GGG - chr5.2:18666608-18666627 MS.gene23885:CDS 55.0%
TCATAAATCCCCCCACCGCA+GGG + chr5.2:18666622-18666641 None:intergenic 55.0%
TGCACGAGAGGTTGGAGAGA+AGG - chr5.2:18666898-18666917 MS.gene23885:CDS 55.0%
GATATTGAGCCACCCTGCGG+TGG - chr5.2:18666607-18666626 MS.gene23885:CDS 60.0%
GTCATAAATCCCCCCACCGC+AGG + chr5.2:18666623-18666642 None:intergenic 60.0%
TATTGAGCCACCCTGCGGTG+GGG - chr5.2:18666609-18666628 MS.gene23885:CDS 60.0%
ATTGAGCCACCCTGCGGTGG+GGG - chr5.2:18666610-18666629 MS.gene23885:CDS 65.0%
TAAATCCCCCCACCGCAGGG+TGG + chr5.2:18666619-18666638 None:intergenic 65.0%
TTGAGCCACCCTGCGGTGGG+GGG - chr5.2:18666611-18666630 MS.gene23885:CDS 70.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 18666602 18667018 18666602 ID=MS.gene23885
chr5.2 mRNA 18666602 18667018 18666602 ID=MS.gene23885.t1;Parent=MS.gene23885
chr5.2 exon 18666602 18667018 18666602 ID=MS.gene23885.t1.exon1;Parent=MS.gene23885.t1
chr5.2 CDS 18666602 18667018 18666602 ID=cds.MS.gene23885.t1;Parent=MS.gene23885.t1
Gene Sequence

>MS.gene23885

GTTAAGATATTGAGCCACCCTGCGGTGGGGGGATTTATGACACATTGTGGGGGAAACTCAATTGTAGAGGCTGTTGGTGCGGGAGTTCCAATGATAACATGGCCGTGTCATGGAGATCACTTATTCAACGAGAAACTAATAACACAGGTCCGAGGAATTGGAGTAGAAGTAGGTGCAACAGAATGGTGTACAAATGGTAATGGGGAGAGAAAGAAGTTGGTTGGCAGAGATGGCATAGAGAAGGCTATGAGGAGATTGATGGACGGTGGCGATGAAGCTGAAAATATGAGACTACGTGCACGAGAGGTTGGAGAGAAGGCTAGACGAGCTGTTCAAGAAGGTGGTTCCTCTCATAATAATTTGTTATCTTTGATCAACGAAATTAAAAGATTGAGAGGCTGCAAGCCACATGATTAA
Protein sequence

>MS.gene23885.t1

VKILSHPAVGGFMTHCGGNSIVEAVGAGVPMITWPCHGDHLFNEKLITQVRGIGVEVGATEWCTNGNGERKKLVGRDGIEKAMRRLMDGGDEAENMRLRAREVGEKARRAVQEGGSSHNNLLSLINEIKRLRGCKPHD