Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23907.t1 | XP_013457255.1 | 95.1 | 610 | 11 | 2 | 1 | 610 | 102 | 692 | 0.00E+00 | 1141.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23907.t1 | Q5RA75 | 42.2 | 180 | 93 | 3 | 416 | 592 | 828 | 999 | 1.9e-30 | 135.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23907.t1 | A0A072UPJ0 | 95.1 | 610 | 11 | 2 | 1 | 610 | 102 | 692 | 0.0e+00 | 1141.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049744 | MS.gene23907 | 0.808161 | 3.55E-50 | -1.69E-46 |
| MS.gene050213 | MS.gene23907 | 0.812964 | 3.25E-51 | -1.69E-46 |
| MS.gene050257 | MS.gene23907 | 0.820827 | 5.58E-53 | -1.69E-46 |
| MS.gene050258 | MS.gene23907 | 0.821442 | 4.03E-53 | -1.69E-46 |
| MS.gene050348 | MS.gene23907 | 0.831317 | 1.79E-55 | -1.69E-46 |
| MS.gene052307 | MS.gene23907 | 0.818196 | 2.22E-52 | -1.69E-46 |
| MS.gene052609 | MS.gene23907 | 0.868816 | 4.93E-66 | -1.69E-46 |
| MS.gene052775 | MS.gene23907 | 0.829531 | 4.89E-55 | -1.69E-46 |
| MS.gene052776 | MS.gene23907 | 0.847156 | 1.38E-59 | -1.69E-46 |
| MS.gene053079 | MS.gene23907 | 0.801824 | 7.50E-49 | -1.69E-46 |
| MS.gene053143 | MS.gene23907 | 0.823361 | 1.44E-53 | -1.69E-46 |
| MS.gene054585 | MS.gene23907 | 0.807811 | 4.21E-50 | -1.69E-46 |
| MS.gene054824 | MS.gene23907 | 0.813749 | 2.19E-51 | -1.69E-46 |
| MS.gene056507 | MS.gene23907 | 0.82538 | 4.84E-54 | -1.69E-46 |
| MS.gene056519 | MS.gene23907 | 0.828306 | 9.68E-55 | -1.69E-46 |
| MS.gene058292 | MS.gene23907 | 0.835423 | 1.69E-56 | -1.69E-46 |
| MS.gene058633 | MS.gene23907 | 0.865929 | 4.13E-65 | -1.69E-46 |
| MS.gene058649 | MS.gene23907 | 0.814221 | 1.72E-51 | -1.69E-46 |
| MS.gene060933 | MS.gene23907 | 0.807676 | 4.50E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23907.t1 | MTR_4g094378 | 95.082 | 610 | 11 | 2 | 1 | 610 | 102 | 692 | 0.0 | 1188 |
| MS.gene23907.t1 | MTR_1g007420 | 54.248 | 612 | 249 | 9 | 2 | 610 | 204 | 787 | 0.0 | 654 |
| MS.gene23907.t1 | MTR_3g110690 | 51.540 | 617 | 265 | 10 | 2 | 610 | 68 | 658 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23907.t1 | AT1G09980 | 50.641 | 624 | 267 | 9 | 2 | 610 | 101 | 698 | 0.0 | 608 |
| MS.gene23907.t1 | AT1G09980 | 50.641 | 624 | 268 | 9 | 2 | 610 | 101 | 699 | 0.0 | 607 |
| MS.gene23907.t1 | AT1G09980 | 50.641 | 624 | 268 | 9 | 2 | 610 | 101 | 699 | 0.0 | 607 |
| MS.gene23907.t1 | AT1G58350 | 50.641 | 624 | 260 | 10 | 2 | 610 | 101 | 691 | 0.0 | 600 |
| MS.gene23907.t1 | AT1G58350 | 50.641 | 624 | 260 | 10 | 2 | 610 | 101 | 691 | 0.0 | 600 |
| MS.gene23907.t1 | AT1G58350 | 50.641 | 624 | 260 | 10 | 2 | 610 | 101 | 691 | 0.0 | 600 |
| MS.gene23907.t1 | AT1G58350 | 41.867 | 375 | 184 | 9 | 2 | 360 | 101 | 457 | 3.06e-83 | 276 |
| MS.gene23907.t1 | AT1G58350 | 68.649 | 185 | 43 | 1 | 426 | 610 | 439 | 608 | 2.12e-80 | 268 |
Find 128 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAATTCTCTATTCAATTC+AGG | 0.191230 | 4.4:+20323211 | MS.gene23907:CDS |
| CTTCAAGACATGTATATATT+TGG | 0.191479 | 4.4:+20321841 | MS.gene23907:CDS |
| AGGGAAATCATTTGGATTTA+CGG | 0.261407 | 4.4:+20322767 | MS.gene23907:intron |
| AAGTGATCTCTTTCCTAAAA+AGG | 0.278922 | 4.4:+20322905 | MS.gene23907:CDS |
| CTCTATTCAATTCAGGGCTT+TGG | 0.283617 | 4.4:+20323218 | MS.gene23907:CDS |
| ATCTCATTCTACCTAGCTTT+TGG | 0.288740 | 4.4:+20319225 | MS.gene23907:CDS |
| TGTAATCCCAGAAGAGCTTT+AGG | 0.305888 | 4.4:-20319749 | None:intergenic |
| ACGCGTTCTACAATAATAAT+AGG | 0.308080 | 4.4:-20321880 | None:intergenic |
| TAAAATTCAGGGAAATCATT+TGG | 0.309549 | 4.4:+20322759 | MS.gene23907:intron |
| TTGAATCAGATGATACAAAA+TGG | 0.314689 | 4.4:+20320744 | MS.gene23907:CDS |
| GTATACCTATGTGTCGATAT+CGG | 0.316268 | 4.4:+20323162 | MS.gene23907:CDS |
| TTGAATTTCTGCGCAAATCC+TGG | 0.325382 | 4.4:+20321399 | MS.gene23907:CDS |
| AATCACCTCAGCTGCCTGAT+AGG | 0.328592 | 4.4:+20320813 | MS.gene23907:CDS |
| CGCATTATTGCAGTTTGAAT+AGG | 0.328610 | 4.4:-20321685 | None:intergenic |
| CATGCTCCTATGACTGCTAC+TGG | 0.333893 | 4.4:+20319522 | MS.gene23907:CDS |
| AGATGATCATCCCAAGAAAA+AGG | 0.335417 | 4.4:-20320995 | None:intergenic |
| CATCCATCAACTGACCTTTA+CGG | 0.338542 | 4.4:+20323270 | MS.gene23907:CDS |
| TAACAACGAGACTAATAAAA+TGG | 0.343431 | 4.4:-20323691 | None:intergenic |
| CCTGCCTTGCATATCTAATC+TGG | 0.357865 | 4.4:-20319182 | None:intergenic |
| ATCTGGCGACTTCAGAGAAA+TGG | 0.359053 | 4.4:+20322864 | MS.gene23907:CDS |
| CTATCGGTAATCTCATTGTC+AGG | 0.387190 | 4.4:+20322992 | MS.gene23907:CDS |
| GGAGAACTGAATGGTCAATA+TGG | 0.393372 | 4.4:+20321432 | MS.gene23907:CDS |
| GTCGATATCGGGTCCACACT+TGG | 0.395614 | 4.4:+20323174 | MS.gene23907:CDS |
| ATTGTTCACCATCAATACTT+TGG | 0.404100 | 4.4:-20320793 | None:intergenic |
| GCACTGACTTCTTCCCTATC+AGG | 0.404605 | 4.4:-20320827 | None:intergenic |
| CGAATCAGCTCTTATATCTC+TGG | 0.407257 | 4.4:+20321041 | MS.gene23907:CDS |
| GACATTAGAAACTGTATCTC+GGG | 0.408136 | 4.4:-20322820 | None:intergenic |
| CGAATTCTCTATTCAATTCA+GGG | 0.417165 | 4.4:+20323212 | MS.gene23907:CDS |
| GTAATCCCAGAAGAGCTTTA+GGG | 0.418437 | 4.4:-20319748 | None:intergenic |
| AGTGGGAGTAGCCAGCAAAA+TGG | 0.418914 | 4.4:+20322006 | MS.gene23907:CDS |
| ATGTCCTAAGCAATGGTTCC+AGG | 0.419292 | 4.4:+20321968 | MS.gene23907:CDS |
| GTGGGAGTAGCCAGCAAAAT+GGG | 0.420182 | 4.4:+20322007 | MS.gene23907:CDS |
| CAGCGTCCTTCTCCTGTAGA+TGG | 0.422292 | 4.4:-20323717 | None:intergenic |
| AATGAAGTTTGAATTCAAAC+TGG | 0.428284 | 4.4:-20321923 | None:intergenic |
| ATGGACTAAACATAGGGAAT+AGG | 0.428644 | 4.4:+20323668 | MS.gene23907:intron |
| GAAGGACGCTGGAAAACTTT+CGG | 0.432504 | 4.4:+20323729 | MS.gene23907:CDS |
| TGAATTGTACCAGTGATTGT+AGG | 0.436134 | 4.4:+20320369 | MS.gene23907:intron |
| GTATACAAGTATCTTAGATA+TGG | 0.439686 | 4.4:-20323145 | None:intergenic |
| ACTAAACTTGTTTGTGGACC+TGG | 0.445595 | 4.4:-20321986 | None:intergenic |
| TAATGCGTGCAGAACTTCAT+AGG | 0.447317 | 4.4:+20321701 | MS.gene23907:CDS |
| GCACGTGTCCAAAGTATTGA+TGG | 0.455150 | 4.4:+20320785 | MS.gene23907:CDS |
| TATACCTATGTGTCGATATC+GGG | 0.465136 | 4.4:+20323163 | MS.gene23907:CDS |
| ATTGTCAGGGCAGCCTTAGC+AGG | 0.466145 | 4.4:+20323006 | MS.gene23907:CDS |
| GCAAATGAAGAGAAAACATC+TGG | 0.466183 | 4.4:+20322847 | MS.gene23907:CDS |
| ATGAAAGTATTCTCAAGATC+AGG | 0.468624 | 4.4:-20323298 | None:intergenic |
| TTGGCTATTGAAGAAGTTCA+AGG | 0.476659 | 4.4:+20323237 | MS.gene23907:CDS |
| GTCTGATTTACAAGGTTCAC+TGG | 0.477160 | 4.4:+20319688 | MS.gene23907:CDS |
| GAATTGTACCAGTGATTGTA+GGG | 0.482664 | 4.4:+20320370 | MS.gene23907:intron |
| ACTAACCCAGTAGCAGTCAT+AGG | 0.488470 | 4.4:-20319528 | None:intergenic |
| AGTTTGGATGATTGATGATA+CGG | 0.489447 | 4.4:+20319134 | None:intergenic |
| ACTCCCACTAAACTTGTTTG+TGG | 0.495464 | 4.4:-20321992 | None:intergenic |
| TGGACCTGGAACCATTGCTT+AGG | 0.495670 | 4.4:-20321972 | None:intergenic |
| CATCCGTAAAGGTCAGTTGA+TGG | 0.496688 | 4.4:-20323273 | None:intergenic |
| TTTCAGTCAAATCAATAGCT+TGG | 0.497020 | 4.4:-20320715 | None:intergenic |
| TGAATTTCTGCGCAAATCCT+GGG | 0.498276 | 4.4:+20321400 | MS.gene23907:CDS |
| AGGTCCACAAACAAGTTTAG+TGG | 0.498908 | 4.4:+20321988 | MS.gene23907:CDS |
| TCGTTGTTATTACCATCTAC+AGG | 0.499294 | 4.4:+20323705 | MS.gene23907:CDS |
| CTCATAAATAATACCTGCTA+AGG | 0.499861 | 4.4:-20323019 | None:intergenic |
| AGCTTCGTTGGTCATTCTAT+CGG | 0.501317 | 4.4:+20322976 | MS.gene23907:CDS |
| TCTGGCGACTTCAGAGAAAT+GGG | 0.501567 | 4.4:+20322865 | MS.gene23907:CDS |
| CGGGGTCTATTAAAAGCCAT+TGG | 0.503415 | 4.4:-20322801 | None:intergenic |
| GATATCAAGCTCAGCTTCGT+TGG | 0.503921 | 4.4:+20322964 | MS.gene23907:CDS |
| TGATGCTTTCCATGCTGTCA+TGG | 0.505223 | 4.4:+20319793 | MS.gene23907:CDS |
| ATCACCTCAGCTGCCTGATA+GGG | 0.508140 | 4.4:+20320814 | MS.gene23907:CDS |
| ATGTATTTCTGAAATTCCAC+AGG | 0.508977 | 4.4:+20321065 | MS.gene23907:CDS |
| TTTCGATGCAGATCAACAAT+CGG | 0.512442 | 4.4:+20321815 | MS.gene23907:intron |
| TTGCGCAGGTCTGATTTACA+AGG | 0.512635 | 4.4:+20319680 | MS.gene23907:intron |
| AATTACGCTGAAGATTATGT+TGG | 0.515085 | 4.4:+20320404 | MS.gene23907:CDS |
| AATAATTCCAGAAAGCATGA+TGG | 0.516655 | 4.4:+20323120 | MS.gene23907:intron |
| TCAATACTTTGGACACGTGC+TGG | 0.518051 | 4.4:-20320782 | None:intergenic |
| ATTACGCTGAAGATTATGTT+GGG | 0.519193 | 4.4:+20320405 | MS.gene23907:CDS |
| TACGGCTTGTTCGTAACCAA+TGG | 0.520931 | 4.4:+20322785 | MS.gene23907:CDS |
| GCAAATCCTGGGCTGTTGAT+CGG | 0.521937 | 4.4:+20321411 | MS.gene23907:CDS |
| GATGCTCATCAAAGCATTGA+TGG | 0.522659 | 4.4:+20320640 | MS.gene23907:CDS |
| CCAGATTAGATATGCAAGGC+AGG | 0.531143 | 4.4:+20319182 | MS.gene23907:CDS |
| TGACATTAGAAACTGTATCT+CGG | 0.536231 | 4.4:-20322821 | None:intergenic |
| TTCGATGCAGATCAACAATC+GGG | 0.540738 | 4.4:+20321816 | MS.gene23907:intron |
| TTTCATCTATAATCTTTCCA+AGG | 0.548074 | 4.4:+20323315 | MS.gene23907:CDS |
| TATATGCACAACAAAGTTGA+GGG | 0.548369 | 4.4:+20321488 | MS.gene23907:CDS |
| CCTCATATTCACCAAAAGCT+AGG | 0.548403 | 4.4:-20319236 | None:intergenic |
| GGCGAGGCATATCACAAATG+AGG | 0.549481 | 4.4:+20321722 | MS.gene23907:CDS |
| GAATTCAAACTTCATTTCTG+TGG | 0.555232 | 4.4:+20321930 | MS.gene23907:CDS |
| CATCTACAGGAGAAGGACGC+TGG | 0.558269 | 4.4:+20323718 | MS.gene23907:CDS |
| CTTGCATATCTAATCTGGAA+TGG | 0.563392 | 4.4:-20319177 | None:intergenic |
| ACAGAAGTTCATTAAATACA+AGG | 0.563774 | 4.4:+20321534 | MS.gene23907:CDS |
| AAAAGGTTGAACTGATTCCT+CGG | 0.567378 | 4.4:-20320978 | None:intergenic |
| ATGAACTTCTGTGTAAGCTA+TGG | 0.570881 | 4.4:-20321523 | None:intergenic |
| TCGATATCGGGTCCACACTT+GGG | 0.574688 | 4.4:+20323175 | MS.gene23907:CDS |
| TTATTACCATCTACAGGAGA+AGG | 0.579989 | 4.4:+20323711 | MS.gene23907:CDS |
| AGTTCTCCGATCAACAGCCC+AGG | 0.586596 | 4.4:-20321417 | None:intergenic |
| TGGAAAGCATCAAAGTGGAT+AGG | 0.589707 | 4.4:-20319782 | None:intergenic |
| TGGCTATTGAAGAAGTTCAA+GGG | 0.589842 | 4.4:+20323238 | MS.gene23907:CDS |
| AATATGGATGGTGTACTCAA+AGG | 0.598801 | 4.4:+20321448 | MS.gene23907:CDS |
| AAGATCAGGATCATCCGTAA+AGG | 0.598968 | 4.4:-20323284 | None:intergenic |
| ATATATGCACAACAAAGTTG+AGG | 0.599454 | 4.4:+20321487 | MS.gene23907:CDS |
| ATGCTCCTATGACTGCTACT+GGG | 0.599526 | 4.4:+20319523 | MS.gene23907:CDS |
| GCAAGGCATGTCCTAAGCAA+TGG | 0.600325 | 4.4:+20321961 | MS.gene23907:CDS |
| GATCTGAAAAGAATAAGCAC+AGG | 0.602066 | 4.4:+20320686 | MS.gene23907:CDS |
| GGTCCACAAACAAGTTTAGT+GGG | 0.604387 | 4.4:+20321989 | MS.gene23907:CDS |
| TTATCACACAATTCGACAGA+AGG | 0.607461 | 4.4:+20319853 | MS.gene23907:CDS |
| AACTGAATGGTCAATATGGA+TGG | 0.612659 | 4.4:+20321436 | MS.gene23907:CDS |
| TTGAATTCAAACTGGCAGAA+CGG | 0.613557 | 4.4:-20321915 | None:intergenic |
| TCTTCCCTATCAGGCAGCTG+AGG | 0.617695 | 4.4:-20320818 | None:intergenic |
| GATACAGTTTCTAATGTCAG+AGG | 0.619769 | 4.4:+20322825 | MS.gene23907:CDS |
| GCGAGGCATATCACAAATGA+GGG | 0.621981 | 4.4:+20321723 | MS.gene23907:CDS |
| TAATCCCAGAAGAGCTTTAG+GGG | 0.624736 | 4.4:-20319747 | None:intergenic |
| TTGTATCAACCATGACAGCA+TGG | 0.625771 | 4.4:-20319802 | None:intergenic |
| ATAATAATAGGAACAAGCAA+AGG | 0.629914 | 4.4:-20321868 | None:intergenic |
| AGATTATGTTGGGTCAAACA+AGG | 0.639267 | 4.4:+20320415 | MS.gene23907:CDS |
| TATCGGTAATCTCATTGTCA+GGG | 0.639335 | 4.4:+20322993 | MS.gene23907:CDS |
| TTGTTGTGCATATATTGATG+AGG | 0.641825 | 4.4:-20321479 | None:intergenic |
| CGTGCAGAACTTCATAGGCG+AGG | 0.643599 | 4.4:+20321706 | MS.gene23907:CDS |
| CATTCCAGATTAGATATGCA+AGG | 0.646025 | 4.4:+20319178 | MS.gene23907:CDS |
| TGGACCCGATATCGACACAT+AGG | 0.653112 | 4.4:-20323167 | None:intergenic |
| TAATATCAATTATCTAACCG+AGG | 0.655534 | 4.4:+20320961 | MS.gene23907:CDS |
| TTTCTGTGGAGAATGATGCA+AGG | 0.657311 | 4.4:+20321944 | MS.gene23907:CDS |
| ATCCCAGAAGAGCTTTAGGG+GGG | 0.659435 | 4.4:-20319745 | None:intergenic |
| CAGCATGGAAAGCATCAAAG+TGG | 0.659782 | 4.4:-20319787 | None:intergenic |
| AGTGATTGTAGGGATTCAGA+AGG | 0.662074 | 4.4:+20320380 | MS.gene23907:intron |
| ATATGCACAACAAAGTTGAG+GGG | 0.678794 | 4.4:+20321489 | MS.gene23907:CDS |
| ACATTAGAAACTGTATCTCG+GGG | 0.679231 | 4.4:-20322819 | None:intergenic |
| CAATTCGACAGAAGGTACCA+AGG | 0.680032 | 4.4:+20319861 | MS.gene23907:CDS |
| AATCCCAGAAGAGCTTTAGG+GGG | 0.680337 | 4.4:-20319746 | None:intergenic |
| CTGTTGATCGGAGAACTGAA+TGG | 0.680511 | 4.4:+20321423 | MS.gene23907:CDS |
| CTGTACATATAACCCAAGTG+TGG | 0.683359 | 4.4:-20323187 | None:intergenic |
| GCATATCTAATCTGGAATGG+CGG | 0.692647 | 4.4:-20319174 | None:intergenic |
| TAGGGAAGAAGTCAGTGCCG+TGG | 0.704921 | 4.4:+20320832 | MS.gene23907:CDS |
| GAAGTTCATTAAATACAAGG+AGG | 0.717680 | 4.4:+20321537 | MS.gene23907:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAACATAAATAAGTTA+TGG | - | chr4.4:20320300-20320319 | None:intergenic | 10.0% |
| !! | CAAAAATAAAAAATTAAAGT+AGG | + | chr4.4:20323070-20323089 | MS.gene23907:intron | 10.0% |
| !!! | AATTTAAAATCAAATTTGAT+TGG | - | chr4.4:20320214-20320233 | None:intergenic | 10.0% |
| !!! | ATATTAAACTCTATTTTTAA+TGG | + | chr4.4:20323649-20323668 | MS.gene23907:intron | 10.0% |
| !!! | ATTTAAAATCAAATTTGATT+GGG | - | chr4.4:20320213-20320232 | None:intergenic | 10.0% |
| !!! | TTTAATTTTTTATTTTTGTG+TGG | - | chr4.4:20323068-20323087 | None:intergenic | 10.0% |
| !! | AAATAGAGTTTAATATTGAT+AGG | - | chr4.4:20323645-20323664 | None:intergenic | 15.0% |
| !! | AAATGAAACATACAAAAAAA+TGG | + | chr4.4:20319596-20319615 | MS.gene23907:intron | 15.0% |
| !! | CACAAAAAAAATATAAACAA+GGG | - | chr4.4:20322189-20322208 | None:intergenic | 15.0% |
| !! | TCACAAAAAAAATATAAACA+AGG | - | chr4.4:20322190-20322209 | None:intergenic | 15.0% |
| !!! | ACATTATAATTTTTAATGCA+AGG | + | chr4.4:20321256-20321275 | MS.gene23907:intron | 15.0% |
| !!! | CTATATTGATAATTTTTTCT+TGG | + | chr4.4:20321214-20321233 | MS.gene23907:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGTGTGA+AGG | + | chr4.4:20320495-20320514 | MS.gene23907:intron | 15.0% |
| !! | AACAAAATATCATCACAATT+TGG | - | chr4.4:20319398-20319417 | None:intergenic | 20.0% |
| !! | AAGATAATGAAGATAAAATG+AGG | + | chr4.4:20320042-20320061 | MS.gene23907:intron | 20.0% |
| !! | ACAGTATATTATTTCCAAAA+AGG | - | chr4.4:20319569-20319588 | None:intergenic | 20.0% |
| !! | CAGTATATTATTTCCAAAAA+GGG | - | chr4.4:20319568-20319587 | None:intergenic | 20.0% |
| !! | CATAATTTGAAAGAAAAGAA+AGG | - | chr4.4:20322570-20322589 | None:intergenic | 20.0% |
| !! | CATATATTTAAACTCAAAAC+TGG | - | chr4.4:20319899-20319918 | None:intergenic | 20.0% |
| !! | CTTATCTATCATAAATTTCT+TGG | + | chr4.4:20319443-20319462 | MS.gene23907:intron | 20.0% |
| !! | TAAATACAATGATTGTGAAA+TGG | + | chr4.4:20319642-20319661 | MS.gene23907:intron | 20.0% |
| !! | TGAGATTGAAATAAAATGTT+GGG | + | chr4.4:20323400-20323419 | MS.gene23907:intron | 20.0% |
| !! | TTAGTGCTAAAAGTAATATT+AGG | - | chr4.4:20322227-20322246 | None:intergenic | 20.0% |
| !! | TTGAGATTGAAATAAAATGT+TGG | + | chr4.4:20323399-20323418 | MS.gene23907:intron | 20.0% |
| !!! | AGGGTGATATTTATATTTTT+CGG | - | chr4.4:20322413-20322432 | None:intergenic | 20.0% |
| !!! | ATAAATATCACCCTTTTTAA+TGG | + | chr4.4:20322419-20322438 | MS.gene23907:intron | 20.0% |
| !!! | ATGGCTATTTTACAATTATA+GGG | - | chr4.4:20320281-20320300 | None:intergenic | 20.0% |
| !!! | ATTTTTAATGGACTAAACAT+AGG | + | chr4.4:20323661-20323680 | MS.gene23907:intron | 20.0% |
| !!! | TATGGCTATTTTACAATTAT+AGG | - | chr4.4:20320282-20320301 | None:intergenic | 20.0% |
| !!! | TCTTCATAATATCTTTAAAG+TGG | + | chr4.4:20319953-20319972 | MS.gene23907:intron | 20.0% |
| !!! | TTCAAGTTTATTGGTATATT+TGG | + | chr4.4:20323456-20323475 | MS.gene23907:intron | 20.0% |
| !!! | TTTTTAATGGACTAAACATA+GGG | + | chr4.4:20323662-20323681 | MS.gene23907:intron | 20.0% |
| ! | AAAAGAAAAAGACAGAAACA+AGG | - | chr4.4:20322672-20322691 | None:intergenic | 25.0% |
| ! | AAAATATCATCACAATTTGG+AGG | - | chr4.4:20319395-20319414 | None:intergenic | 25.0% |
| ! | AACTTGAATGTCCATTAAAA+AGG | - | chr4.4:20322433-20322452 | None:intergenic | 25.0% |
| ! | AATGAAGTTTGAATTCAAAC+TGG | - | chr4.4:20321926-20321945 | None:intergenic | 25.0% |
| ! | ACACATTCATGAAATAAATC+AGG | - | chr4.4:20322606-20322625 | None:intergenic | 25.0% |
| ! | ACAGAAGTTCATTAAATACA+AGG | + | chr4.4:20321534-20321553 | MS.gene23907:CDS | 25.0% |
| ! | ACAGTTAAAACAATATAGTG+TGG | - | chr4.4:20320332-20320351 | None:intergenic | 25.0% |
| ! | ACATGAACACATACTTATAA+AGG | - | chr4.4:20319299-20319318 | None:intergenic | 25.0% |
| ! | ACATTGACATTGAAAGAATT+AGG | - | chr4.4:20320859-20320878 | None:intergenic | 25.0% |
| ! | ACTTGAATGTCCATTAAAAA+GGG | - | chr4.4:20322432-20322451 | None:intergenic | 25.0% |
| ! | ATAATAATAGGAACAAGCAA+AGG | - | chr4.4:20321871-20321890 | None:intergenic | 25.0% |
| ! | ATGAACACATACTTATAAAG+GGG | - | chr4.4:20319297-20319316 | None:intergenic | 25.0% |
| ! | ATTTAGCGAAAGTTTATTGA+AGG | - | chr4.4:20322501-20322520 | None:intergenic | 25.0% |
| ! | CATGAACACATACTTATAAA+GGG | - | chr4.4:20319298-20319317 | None:intergenic | 25.0% |
| ! | CTTCAAGACATGTATATATT+TGG | + | chr4.4:20321841-20321860 | MS.gene23907:CDS | 25.0% |
| ! | GTATACAAGTATCTTAGATA+TGG | - | chr4.4:20323148-20323167 | None:intergenic | 25.0% |
| ! | TAAAATTCAGGGAAATCATT+TGG | + | chr4.4:20322759-20322778 | MS.gene23907:intron | 25.0% |
| ! | TAACAACGAGACTAATAAAA+TGG | - | chr4.4:20323694-20323713 | None:intergenic | 25.0% |
| ! | TAATATCAATTATCTAACCG+AGG | + | chr4.4:20320961-20320980 | MS.gene23907:CDS | 25.0% |
| ! | TTAGTCAAATCATCTATGAA+TGG | - | chr4.4:20322723-20322742 | None:intergenic | 25.0% |
| ! | TTATGAAGATATCCTAACAA+AGG | - | chr4.4:20319942-20319961 | None:intergenic | 25.0% |
| ! | TTGAATCAGATGATACAAAA+TGG | + | chr4.4:20320744-20320763 | MS.gene23907:CDS | 25.0% |
| ! | TTTAGCGAAAGTTTATTGAA+GGG | - | chr4.4:20322500-20322519 | None:intergenic | 25.0% |
| ! | TTTCATCTATAATCTTTCCA+AGG | + | chr4.4:20323315-20323334 | MS.gene23907:CDS | 25.0% |
| !! | ATTATCAAAGTAGAGTTGAT+TGG | - | chr4.4:20320133-20320152 | None:intergenic | 25.0% |
| !! | CTTGGTTTGAGATTTATATT+TGG | + | chr4.4:20321232-20321251 | MS.gene23907:intron | 25.0% |
| !! | CTTTATCCATTTTCCTTTTT+AGG | - | chr4.4:20322921-20322940 | None:intergenic | 25.0% |
| !! | TCAACTCTACTTTGATAATA+CGG | + | chr4.4:20320134-20320153 | MS.gene23907:intron | 25.0% |
| !! | TTCCTTCTAAAAAGTAAACA+AGG | - | chr4.4:20319358-20319377 | None:intergenic | 25.0% |
| !! | TTCTGTCTTTTTCTTTTTGA+CGG | + | chr4.4:20322675-20322694 | MS.gene23907:intron | 25.0% |
| !!! | CATAATATCTTTAAAGTGGT+TGG | + | chr4.4:20319957-20319976 | MS.gene23907:intron | 25.0% |
| !!! | GTTTTAACTGTTGAATGATA+TGG | + | chr4.4:20320341-20320360 | MS.gene23907:intron | 25.0% |
| AAGTGATCTCTTTCCTAAAA+AGG | + | chr4.4:20322905-20322924 | MS.gene23907:CDS | 30.0% | |
| AATTACGCTGAAGATTATGT+TGG | + | chr4.4:20320404-20320423 | MS.gene23907:CDS | 30.0% | |
| ACGCGTTCTACAATAATAAT+AGG | - | chr4.4:20321883-20321902 | None:intergenic | 30.0% | |
| AGGAAAATGGTATTATACCT+TGG | - | chr4.4:20323335-20323354 | None:intergenic | 30.0% | |
| AGGGAAATCATTTGGATTTA+CGG | + | chr4.4:20322767-20322786 | MS.gene23907:intron | 30.0% | |
| ATATATGCACAACAAAGTTG+AGG | + | chr4.4:20321487-20321506 | MS.gene23907:CDS | 30.0% | |
| ATATCTTCTTGATCTGTCTT+TGG | + | chr4.4:20322096-20322115 | MS.gene23907:intron | 30.0% | |
| ATTACGCTGAAGATTATGTT+GGG | + | chr4.4:20320405-20320424 | MS.gene23907:CDS | 30.0% | |
| ATTGTTCACCATCAATACTT+TGG | - | chr4.4:20320796-20320815 | None:intergenic | 30.0% | |
| CGAATTCTCTATTCAATTCA+GGG | + | chr4.4:20323212-20323231 | MS.gene23907:CDS | 30.0% | |
| CTAATGATCAAACTCAAATC+AGG | + | chr4.4:20320616-20320635 | MS.gene23907:intron | 30.0% | |
| CTCATAAATAATACCTGCTA+AGG | - | chr4.4:20323022-20323041 | None:intergenic | 30.0% | |
| CTCTTTCCTAAAAAGGAAAA+TGG | + | chr4.4:20322912-20322931 | MS.gene23907:CDS | 30.0% | |
| GAAGAAGAAACAACGATTTA+TGG | - | chr4.4:20321154-20321173 | None:intergenic | 30.0% | |
| GAAGAATAAGTTGCAATAGT+GGG | - | chr4.4:20320594-20320613 | None:intergenic | 30.0% | |
| GAAGTTCATTAAATACAAGG+AGG | + | chr4.4:20321537-20321556 | MS.gene23907:CDS | 30.0% | |
| GAATGTTATCTTGTGAGAAA+AGG | + | chr4.4:20321308-20321327 | MS.gene23907:intron | 30.0% | |
| GAATTCAAACTTCATTTCTG+TGG | + | chr4.4:20321930-20321949 | MS.gene23907:CDS | 30.0% | |
| GATTTATGATCTTCCTGTTT+CGG | + | chr4.4:20321770-20321789 | MS.gene23907:intron | 30.0% | |
| GATTTGCAAACTACTATCTT+GGG | + | chr4.4:20322162-20322181 | MS.gene23907:intron | 30.0% | |
| GTTTAATATTGATAGGCTGT+TGG | - | chr4.4:20323638-20323657 | None:intergenic | 30.0% | |
| TATAAGCTATAAGCTCAAAC+CGG | + | chr4.4:20320080-20320099 | MS.gene23907:intron | 30.0% | |
| TATATGCACAACAAAGTTGA+GGG | + | chr4.4:20321488-20321507 | MS.gene23907:CDS | 30.0% | |
| TCGAATTCTCTATTCAATTC+AGG | + | chr4.4:20323211-20323230 | MS.gene23907:CDS | 30.0% | |
| TGAAGAATAAGTTGCAATAG+TGG | - | chr4.4:20320595-20320614 | None:intergenic | 30.0% | |
| TGACATTAGAAACTGTATCT+CGG | - | chr4.4:20322824-20322843 | None:intergenic | 30.0% | |
| TTAAAGTCACGCATATTGAT+TGG | + | chr4.4:20323578-20323597 | MS.gene23907:intron | 30.0% | |
| TTGCAAATCCTACAAATTGA+AGG | - | chr4.4:20322151-20322170 | None:intergenic | 30.0% | |
| TTGTTGTGCATATATTGATG+AGG | - | chr4.4:20321482-20321501 | None:intergenic | 30.0% | |
| TTTCAGTCAAATCAATAGCT+TGG | - | chr4.4:20320718-20320737 | None:intergenic | 30.0% | |
| ! | AAAGTAGAGTTGATTGGTAA+TGG | - | chr4.4:20320127-20320146 | None:intergenic | 30.0% |
| ! | AATCAGTTCAACCTTTTTCT+TGG | + | chr4.4:20320984-20321003 | MS.gene23907:CDS | 30.0% |
| ! | ACTTAGATCTTTTCTTCAAC+AGG | + | chr4.4:20320928-20320947 | MS.gene23907:intron | 30.0% |
| ! | AGGTTTCTGTTCAAGTTTAT+TGG | + | chr4.4:20323447-20323466 | MS.gene23907:intron | 30.0% |
| ! | ATCAGTTCAACCTTTTTCTT+GGG | + | chr4.4:20320985-20321004 | MS.gene23907:CDS | 30.0% |
| ! | GAACATTGAGTTTTTCTCAT+AGG | - | chr4.4:20322533-20322552 | None:intergenic | 30.0% |
| ! | GAATGTGTTTCTTTTATCCT+CGG | + | chr4.4:20323751-20323770 | MS.gene23907:CDS | 30.0% |
| ! | TTCTTTTCAGATCTTCAAGT+AGG | - | chr4.4:20320679-20320698 | None:intergenic | 30.0% |
| ! | TTGGCTTTCACTTATATACA+GGG | + | chr4.4:20319462-20319481 | MS.gene23907:intron | 30.0% |
| !! | ATGAAAGTATTCTCAAGATC+AGG | - | chr4.4:20323301-20323320 | None:intergenic | 30.0% |
| !! | ATGTATTTCTGAAATTCCAC+AGG | + | chr4.4:20321065-20321084 | MS.gene23907:CDS | 30.0% |
| !! | TATTTTTCGGATTCACAAGA+TGG | - | chr4.4:20322400-20322419 | None:intergenic | 30.0% |
| !! | TTATGGAAAAAAGTGCTACA+AGG | - | chr4.4:20321137-20321156 | None:intergenic | 30.0% |
| !!! | AGAGTAGTTGTTTTTGTTCA+TGG | + | chr4.4:20322039-20322058 | MS.gene23907:CDS | 30.0% |
| !!! | CTCCTTGTTTACTTTTTAGA+AGG | + | chr4.4:20319353-20319372 | MS.gene23907:intron | 30.0% |
| !!! | GAGTAGTTGTTTTTGTTCAT+GGG | + | chr4.4:20322040-20322059 | MS.gene23907:CDS | 30.0% |
| !!! | GTTTTAGAGCACTTATTGTT+AGG | + | chr4.4:20322346-20322365 | MS.gene23907:intron | 30.0% |
| !!! | GTTTTATTTTCCCTGAGTAA+AGG | - | chr4.4:20321371-20321390 | None:intergenic | 30.0% |
| AAAGTGGTTGGCAAAATTAG+CGG | + | chr4.4:20319969-20319988 | MS.gene23907:intron | 35.0% | |
| AACTGAATGGTCAATATGGA+TGG | + | chr4.4:20321436-20321455 | MS.gene23907:CDS | 35.0% | |
| AACTTGAACAGAAACCTTGA+TGG | - | chr4.4:20323444-20323463 | None:intergenic | 35.0% | |
| AAGAAGATATAAGAGACTGC+AGG | - | chr4.4:20322086-20322105 | None:intergenic | 35.0% | |
| AAGATGGTCGGTATTCATTT+AGG | - | chr4.4:20322384-20322403 | None:intergenic | 35.0% | |
| AATAAAATGTTGGGAAGCGA+CGG | + | chr4.4:20323409-20323428 | MS.gene23907:intron | 35.0% | |
| AATATGGATGGTGTACTCAA+AGG | + | chr4.4:20321448-20321467 | MS.gene23907:CDS | 35.0% | |
| ACATTAGAAACTGTATCTCG+GGG | - | chr4.4:20322822-20322841 | None:intergenic | 35.0% | |
| ACATTTATACATCCACACCT+AGG | - | chr4.4:20322476-20322495 | None:intergenic | 35.0% | |
| ACTCCTCATCACTAAAATTC+AGG | + | chr4.4:20322747-20322766 | MS.gene23907:intron | 35.0% | |
| AGAAAAAGACAGAAACAAGG+TGG | - | chr4.4:20322669-20322688 | None:intergenic | 35.0% | |
| AGATGATCATCCCAAGAAAA+AGG | - | chr4.4:20320998-20321017 | None:intergenic | 35.0% | |
| AGATTATGTTGGGTCAAACA+AGG | + | chr4.4:20320415-20320434 | MS.gene23907:CDS | 35.0% | |
| ATAAGCTATAAGCTCAAACC+GGG | + | chr4.4:20320081-20320100 | MS.gene23907:intron | 35.0% | |
| ATATGCACAACAAAGTTGAG+GGG | + | chr4.4:20321489-20321508 | MS.gene23907:CDS | 35.0% | |
| ATGAACTTCTGTGTAAGCTA+TGG | - | chr4.4:20321526-20321545 | None:intergenic | 35.0% | |
| ATTGTTGCATCACCTTTGTT+AGG | + | chr4.4:20319927-20319946 | MS.gene23907:intron | 35.0% | |
| CAATCCTATTCCTTTACTCA+GGG | + | chr4.4:20321358-20321377 | MS.gene23907:intron | 35.0% | |
| CATTCCAGATTAGATATGCA+AGG | + | chr4.4:20319178-20319197 | MS.gene23907:CDS | 35.0% | |
| CATTGAAAGAATTAGGACCA+CGG | - | chr4.4:20320852-20320871 | None:intergenic | 35.0% | |
| CGCATTATTGCAGTTTGAAT+AGG | - | chr4.4:20321688-20321707 | None:intergenic | 35.0% | |
| CTCCTCATCACTAAAATTCA+GGG | + | chr4.4:20322748-20322767 | MS.gene23907:intron | 35.0% | |
| CTTGCATATCTAATCTGGAA+TGG | - | chr4.4:20319180-20319199 | None:intergenic | 35.0% | |
| CTTTGTCACCTTCAATTTGT+AGG | + | chr4.4:20322140-20322159 | MS.gene23907:intron | 35.0% | |
| GAAAACAAGGAAGAGAACAT+AGG | - | chr4.4:20320250-20320269 | None:intergenic | 35.0% | |
| GAATTGTACCAGTGATTGTA+GGG | + | chr4.4:20320370-20320389 | MS.gene23907:intron | 35.0% | |
| GACATTAGAAACTGTATCTC+GGG | - | chr4.4:20322823-20322842 | None:intergenic | 35.0% | |
| GATACAGTTTCTAATGTCAG+AGG | + | chr4.4:20322825-20322844 | MS.gene23907:CDS | 35.0% | |
| GATCTGAAAAGAATAAGCAC+AGG | + | chr4.4:20320686-20320705 | MS.gene23907:CDS | 35.0% | |
| GATTGAGTCAAATGCTGTAA+AGG | + | chr4.4:20319618-20319637 | MS.gene23907:intron | 35.0% | |
| GCAAATGAAGAGAAAACATC+TGG | + | chr4.4:20322847-20322866 | MS.gene23907:CDS | 35.0% | |
| GGATTTGCAAACTACTATCT+TGG | + | chr4.4:20322161-20322180 | MS.gene23907:intron | 35.0% | |
| GGTGACAAAGTAACAAGATA+AGG | - | chr4.4:20322130-20322149 | None:intergenic | 35.0% | |
| GGTTTCTATTAGCAACATGA+AGG | + | chr4.4:20321277-20321296 | MS.gene23907:intron | 35.0% | |
| TACTATCCACTATAAGCTAG+CGG | + | chr4.4:20320161-20320180 | MS.gene23907:intron | 35.0% | |
| TAGGGAGTAGATAGAAAACA+AGG | - | chr4.4:20320263-20320282 | None:intergenic | 35.0% | |
| TATCGGTAATCTCATTGTCA+GGG | + | chr4.4:20322993-20323012 | MS.gene23907:CDS | 35.0% | |
| TCAATCCTATTCCTTTACTC+AGG | + | chr4.4:20321357-20321376 | MS.gene23907:intron | 35.0% | |
| TGAATTGTACCAGTGATTGT+AGG | + | chr4.4:20320369-20320388 | MS.gene23907:intron | 35.0% | |
| TGGAAAACAAGACAGAAACA+AGG | - | chr4.4:20322703-20322722 | None:intergenic | 35.0% | |
| TGGCTATTGAAGAAGTTCAA+GGG | + | chr4.4:20323238-20323257 | MS.gene23907:CDS | 35.0% | |
| TTATCACACAATTCGACAGA+AGG | + | chr4.4:20319853-20319872 | MS.gene23907:CDS | 35.0% | |
| TTATTACCATCTACAGGAGA+AGG | + | chr4.4:20323711-20323730 | MS.gene23907:CDS | 35.0% | |
| TTGAATTCAAACTGGCAGAA+CGG | - | chr4.4:20321918-20321937 | None:intergenic | 35.0% | |
| TTGGCTATTGAAGAAGTTCA+AGG | + | chr4.4:20323237-20323256 | MS.gene23907:CDS | 35.0% | |
| TTTCGATGCAGATCAACAAT+CGG | + | chr4.4:20321815-20321834 | MS.gene23907:intron | 35.0% | |
| ! | AAAAGGTTGAACTGATTCCT+CGG | - | chr4.4:20320981-20321000 | None:intergenic | 35.0% |
| ! | ATGGACTAAACATAGGGAAT+AGG | + | chr4.4:20323668-20323687 | MS.gene23907:intron | 35.0% |
| ! | CTTGGCTTTCACTTATATAC+AGG | + | chr4.4:20319461-20319480 | MS.gene23907:intron | 35.0% |
| ! | GTATACCTATGTGTCGATAT+CGG | + | chr4.4:20323162-20323181 | MS.gene23907:CDS | 35.0% |
| ! | GTTAAAGTTTTGCACTGTGT+AGG | + | chr4.4:20319319-20319338 | MS.gene23907:intron | 35.0% |
| ! | TATACCTATGTGTCGATATC+GGG | + | chr4.4:20323163-20323182 | MS.gene23907:CDS | 35.0% |
| ! | TCGTTGTTATTACCATCTAC+AGG | + | chr4.4:20323705-20323724 | MS.gene23907:CDS | 35.0% |
| ! | TGCTTCAATGTGATCTGTTT+TGG | + | chr4.4:20322637-20322656 | MS.gene23907:intron | 35.0% |
| ! | TTGTTTTCAGCACTAGGAAA+AGG | - | chr4.4:20323363-20323382 | None:intergenic | 35.0% |
| ! | TTTCCTAGTGCTGAAAACAA+TGG | + | chr4.4:20323363-20323382 | MS.gene23907:intron | 35.0% |
| ! | TTTTCCCTGAGTAAAGGAAT+AGG | - | chr4.4:20321365-20321384 | None:intergenic | 35.0% |
| !! | ACTTCAGAGAAATGGGTTTT+CGG | + | chr4.4:20322872-20322891 | MS.gene23907:CDS | 35.0% |
| !! | ATCTCATTCTACCTAGCTTT+TGG | + | chr4.4:20319225-20319244 | MS.gene23907:CDS | 35.0% |
| !! | GCTGAAAACAATGGACTTTT+TGG | + | chr4.4:20323372-20323391 | MS.gene23907:intron | 35.0% |
| !! | TGTTTTTGTTCATGGGTTTC+AGG | + | chr4.4:20322047-20322066 | MS.gene23907:CDS | 35.0% |
| !! | TTCCCTGAATTTTAGTGATG+AGG | - | chr4.4:20322753-20322772 | None:intergenic | 35.0% |
| !! | TTGATTGGTTGTGATTTTGC+TGG | + | chr4.4:20323593-20323612 | MS.gene23907:intron | 35.0% |
| AACATAGGTGAACAAACCTG+TGG | - | chr4.4:20321084-20321103 | None:intergenic | 40.0% | |
| AAGATCAGGATCATCCGTAA+AGG | - | chr4.4:20323287-20323306 | None:intergenic | 40.0% | |
| AGCTTCGTTGGTCATTCTAT+CGG | + | chr4.4:20322976-20322995 | MS.gene23907:CDS | 40.0% | |
| AGGTCCACAAACAAGTTTAG+TGG | + | chr4.4:20321988-20322007 | MS.gene23907:CDS | 40.0% | |
| AGTGATTGTAGGGATTCAGA+AGG | + | chr4.4:20320380-20320399 | MS.gene23907:intron | 40.0% | |
| ATAAAATGTTGGGAAGCGAC+GGG | + | chr4.4:20323410-20323429 | MS.gene23907:intron | 40.0% | |
| CATCCATCAACTGACCTTTA+CGG | + | chr4.4:20323270-20323289 | MS.gene23907:CDS | 40.0% | |
| CCTCATATTCACCAAAAGCT+AGG | - | chr4.4:20319239-20319258 | None:intergenic | 40.0% | |
| CGAATCAGCTCTTATATCTC+TGG | + | chr4.4:20321041-20321060 | MS.gene23907:CDS | 40.0% | |
| CTATCGGTAATCTCATTGTC+AGG | + | chr4.4:20322992-20323011 | MS.gene23907:CDS | 40.0% | |
| CTCTATTCAATTCAGGGCTT+TGG | + | chr4.4:20323218-20323237 | MS.gene23907:CDS | 40.0% | |
| CTGTACATATAACCCAAGTG+TGG | - | chr4.4:20323190-20323209 | None:intergenic | 40.0% | |
| GGAAAAGGAGACAAGGAAAA+TGG | - | chr4.4:20323348-20323367 | None:intergenic | 40.0% | |
| GGAGAACTGAATGGTCAATA+TGG | + | chr4.4:20321432-20321451 | MS.gene23907:CDS | 40.0% | |
| GGTCCACAAACAAGTTTAGT+GGG | + | chr4.4:20321989-20322008 | MS.gene23907:CDS | 40.0% | |
| GTAATCCCAGAAGAGCTTTA+GGG | - | chr4.4:20319751-20319770 | None:intergenic | 40.0% | |
| GTCTGATTTACAAGGTTCAC+TGG | + | chr4.4:20319688-20319707 | MS.gene23907:CDS | 40.0% | |
| TAATGCGTGCAGAACTTCAT+AGG | + | chr4.4:20321701-20321720 | MS.gene23907:CDS | 40.0% | |
| TGAATTTCTGCGCAAATCCT+GGG | + | chr4.4:20321400-20321419 | MS.gene23907:CDS | 40.0% | |
| TGTAATCCCAGAAGAGCTTT+AGG | - | chr4.4:20319752-20319771 | None:intergenic | 40.0% | |
| TTCGATGCAGATCAACAATC+GGG | + | chr4.4:20321816-20321835 | MS.gene23907:intron | 40.0% | |
| TTCTGAATCCCTACAATCAC+TGG | - | chr4.4:20320381-20320400 | None:intergenic | 40.0% | |
| TTGAATTTCTGCGCAAATCC+TGG | + | chr4.4:20321399-20321418 | MS.gene23907:CDS | 40.0% | |
| TTGCATTACATTCATTGCGC+AGG | + | chr4.4:20319666-20319685 | MS.gene23907:intron | 40.0% | |
| TTGTATCAACCATGACAGCA+TGG | - | chr4.4:20319805-20319824 | None:intergenic | 40.0% | |
| TTTCGGATTCACAAGATGGT+CGG | - | chr4.4:20322396-20322415 | None:intergenic | 40.0% | |
| TTTCTGTGGAGAATGATGCA+AGG | + | chr4.4:20321944-20321963 | MS.gene23907:CDS | 40.0% | |
| ! | AAGTTTTGCACTGTGTAGGA+TGG | + | chr4.4:20319323-20319342 | MS.gene23907:intron | 40.0% |
| ! | ACTAAACTTGTTTGTGGACC+TGG | - | chr4.4:20321989-20322008 | None:intergenic | 40.0% |
| ! | ACTCCCACTAAACTTGTTTG+TGG | - | chr4.4:20321995-20322014 | None:intergenic | 40.0% |
| ! | AGTCCATTGTTTTCAGCACT+AGG | - | chr4.4:20323369-20323388 | None:intergenic | 40.0% |
| ! | CATGCTTCTCTTTCCCTTTT+TGG | + | chr4.4:20319552-20319571 | MS.gene23907:intron | 40.0% |
| ! | CTTTTAGCACTAACCACCAA+AGG | + | chr4.4:20322234-20322253 | MS.gene23907:intron | 40.0% |
| ! | GCATATCTAATCTGGAATGG+CGG | - | chr4.4:20319177-20319196 | None:intergenic | 40.0% |
| ! | TAATCCCAGAAGAGCTTTAG+GGG | - | chr4.4:20319750-20319769 | None:intergenic | 40.0% |
| ! | TCAAAACATGCCCATTTTGC+TGG | - | chr4.4:20322020-20322039 | None:intergenic | 40.0% |
| !! | CCTAGCTTTTGGTGAATATG+AGG | + | chr4.4:20319236-20319255 | MS.gene23907:CDS | 40.0% |
| !! | GATGCTCATCAAAGCATTGA+TGG | + | chr4.4:20320640-20320659 | MS.gene23907:CDS | 40.0% |
| !! | TGGAAAGCATCAAAGTGGAT+AGG | - | chr4.4:20319785-20319804 | None:intergenic | 40.0% |
| AAATTCCAGTCAGCCGAAAC+AGG | - | chr4.4:20321786-20321805 | None:intergenic | 45.0% | |
| ACCAAAGGCTTATACCACCA+AGG | + | chr4.4:20322249-20322268 | MS.gene23907:intron | 45.0% | |
| ACTAACCCAGTAGCAGTCAT+AGG | - | chr4.4:20319531-20319550 | None:intergenic | 45.0% | |
| AGCACTAGGAAAAGGAGACA+AGG | - | chr4.4:20323355-20323374 | None:intergenic | 45.0% | |
| ATCTGGCGACTTCAGAGAAA+TGG | + | chr4.4:20322864-20322883 | MS.gene23907:CDS | 45.0% | |
| ATGCTCCTATGACTGCTACT+GGG | + | chr4.4:20319523-20319542 | MS.gene23907:CDS | 45.0% | |
| ATGTCCTAAGCAATGGTTCC+AGG | + | chr4.4:20321968-20321987 | MS.gene23907:CDS | 45.0% | |
| CATCCGTAAAGGTCAGTTGA+TGG | - | chr4.4:20323276-20323295 | None:intergenic | 45.0% | |
| CCAGATTAGATATGCAAGGC+AGG | + | chr4.4:20319182-20319201 | MS.gene23907:CDS | 45.0% | |
| CCTGCCTTGCATATCTAATC+TGG | - | chr4.4:20319185-20319204 | None:intergenic | 45.0% | |
| CGGGGTCTATTAAAAGCCAT+TGG | - | chr4.4:20322804-20322823 | None:intergenic | 45.0% | |
| CTGAAATGTGATCCTAGGTG+TGG | + | chr4.4:20322461-20322480 | MS.gene23907:intron | 45.0% | |
| CTGTTGATCGGAGAACTGAA+TGG | + | chr4.4:20321423-20321442 | MS.gene23907:CDS | 45.0% | |
| CTTATACCACCAAGGCTTAG+GGG | + | chr4.4:20322257-20322276 | MS.gene23907:intron | 45.0% | |
| GAAGGACGCTGGAAAACTTT+CGG | + | chr4.4:20323729-20323748 | MS.gene23907:CDS | 45.0% | |
| GATATCAAGCTCAGCTTCGT+TGG | + | chr4.4:20322964-20322983 | MS.gene23907:CDS | 45.0% | |
| GATTGGGTTTAGACTCCGTT+TGG | - | chr4.4:20320197-20320216 | None:intergenic | 45.0% | |
| GCGAGGCATATCACAAATGA+GGG | + | chr4.4:20321723-20321742 | MS.gene23907:CDS | 45.0% | |
| GCTTATACCACCAAGGCTTA+GGG | + | chr4.4:20322256-20322275 | MS.gene23907:intron | 45.0% | |
| TAAAATGTTGGGAAGCGACG+GGG | + | chr4.4:20323411-20323430 | MS.gene23907:intron | 45.0% | |
| TCAATACTTTGGACACGTGC+TGG | - | chr4.4:20320785-20320804 | None:intergenic | 45.0% | |
| TCCACTATAAGCTAGCGGTT+TGG | + | chr4.4:20320166-20320185 | MS.gene23907:intron | 45.0% | |
| TCTGGCGACTTCAGAGAAAT+GGG | + | chr4.4:20322865-20322884 | MS.gene23907:CDS | 45.0% | |
| TGAAATTGTCCCCTAAGCCT+TGG | - | chr4.4:20322269-20322288 | None:intergenic | 45.0% | |
| TGATGCTTTCCATGCTGTCA+TGG | + | chr4.4:20319793-20319812 | MS.gene23907:CDS | 45.0% | |
| TTGCGCAGGTCTGATTTACA+AGG | + | chr4.4:20319680-20319699 | MS.gene23907:intron | 45.0% | |
| ! | ATTCTCTCACGAGCTTTTCC+CGG | - | chr4.4:20320102-20320121 | None:intergenic | 45.0% |
| ! | TACGGCTTGTTCGTAACCAA+TGG | + | chr4.4:20322785-20322804 | MS.gene23907:CDS | 45.0% |
| ! | TTGGTGGTATAAGCCTTTGG+TGG | - | chr4.4:20322250-20322269 | None:intergenic | 45.0% |
| !! | AATCCCAGAAGAGCTTTAGG+GGG | - | chr4.4:20319749-20319768 | None:intergenic | 45.0% |
| !! | CAATTCGACAGAAGGTACCA+AGG | + | chr4.4:20319861-20319880 | MS.gene23907:CDS | 45.0% |
| !! | CAGCATGGAAAGCATCAAAG+TGG | - | chr4.4:20319790-20319809 | None:intergenic | 45.0% |
| !! | CAGCTCTGAAATGTGATCCT+AGG | + | chr4.4:20322456-20322475 | MS.gene23907:intron | 45.0% |
| !! | GCACGTGTCCAAAGTATTGA+TGG | + | chr4.4:20320785-20320804 | MS.gene23907:CDS | 45.0% |
| !! | AAAAATAAAAAATTAAAGTA+GGG | + | chr4.4:20323071-20323090 | MS.gene23907:intron | 5.0% |
| !! | TTAAATAATTATTTAAACAT+AGG | - | chr4.4:20321099-20321118 | None:intergenic | 5.0% |
| AATCACCTCAGCTGCCTGAT+AGG | + | chr4.4:20320813-20320832 | MS.gene23907:CDS | 50.0% | |
| AATCCCCCCTAAAGCTCTTC+TGG | + | chr4.4:20319742-20319761 | MS.gene23907:CDS | 50.0% | |
| AATTGTCCCCTAAGCCTTGG+TGG | - | chr4.4:20322266-20322285 | None:intergenic | 50.0% | |
| AGTGGGAGTAGCCAGCAAAA+TGG | + | chr4.4:20322006-20322025 | MS.gene23907:CDS | 50.0% | |
| ATCACCTCAGCTGCCTGATA+GGG | + | chr4.4:20320814-20320833 | MS.gene23907:CDS | 50.0% | |
| ATCCCCCCTAAAGCTCTTCT+GGG | + | chr4.4:20319743-20319762 | MS.gene23907:CDS | 50.0% | |
| ATCTTCCTGTTTCGGCTGAC+TGG | + | chr4.4:20321778-20321797 | MS.gene23907:intron | 50.0% | |
| CATGCTCCTATGACTGCTAC+TGG | + | chr4.4:20319522-20319541 | MS.gene23907:CDS | 50.0% | |
| GCAAATCCTGGGCTGTTGAT+CGG | + | chr4.4:20321411-20321430 | MS.gene23907:CDS | 50.0% | |
| GCAAGGCATGTCCTAAGCAA+TGG | + | chr4.4:20321961-20321980 | MS.gene23907:CDS | 50.0% | |
| GGCGAGGCATATCACAAATG+AGG | + | chr4.4:20321722-20321741 | MS.gene23907:CDS | 50.0% | |
| GGCTTATACCACCAAGGCTT+AGG | + | chr4.4:20322255-20322274 | MS.gene23907:intron | 50.0% | |
| GGTTTAGACTCCGTTTGGCA+AGG | - | chr4.4:20320192-20320211 | None:intergenic | 50.0% | |
| GTGGGAGTAGCCAGCAAAAT+GGG | + | chr4.4:20322007-20322026 | MS.gene23907:CDS | 50.0% | |
| TCGATATCGGGTCCACACTT+GGG | + | chr4.4:20323175-20323194 | MS.gene23907:CDS | 50.0% | |
| TGGACCCGATATCGACACAT+AGG | - | chr4.4:20323170-20323189 | None:intergenic | 50.0% | |
| TGGACCTGGAACCATTGCTT+AGG | - | chr4.4:20321975-20321994 | None:intergenic | 50.0% | |
| ! | ACTGGAGCTCTGACAAACCT+TGG | - | chr4.4:20319881-20319900 | None:intergenic | 50.0% |
| ! | GCCAAACCGCTAGCTTATAG+TGG | - | chr4.4:20320170-20320189 | None:intergenic | 50.0% |
| ! | GCCTTGGTGGTATAAGCCTT+TGG | - | chr4.4:20322253-20322272 | None:intergenic | 50.0% |
| !! | AATGGGTTTTCGGCTTGCTC+AGG | + | chr4.4:20322882-20322901 | MS.gene23907:CDS | 50.0% |
| !! | ATCCCAGAAGAGCTTTAGGG+GGG | - | chr4.4:20319748-20319767 | None:intergenic | 50.0% |
| !! | GCACTGACTTCTTCCCTATC+AGG | - | chr4.4:20320830-20320849 | None:intergenic | 50.0% |
| AGTTCTCCGATCAACAGCCC+AGG | - | chr4.4:20321420-20321439 | None:intergenic | 55.0% | |
| ATTGTCAGGGCAGCCTTAGC+AGG | + | chr4.4:20323006-20323025 | MS.gene23907:CDS | 55.0% | |
| CAGCGTCCTTCTCCTGTAGA+TGG | - | chr4.4:20323720-20323739 | None:intergenic | 55.0% | |
| CATCTACAGGAGAAGGACGC+TGG | + | chr4.4:20323718-20323737 | MS.gene23907:CDS | 55.0% | |
| CGTGCAGAACTTCATAGGCG+AGG | + | chr4.4:20321706-20321725 | MS.gene23907:CDS | 55.0% | |
| GACGGGGTTGTCAACCATCA+AGG | + | chr4.4:20323427-20323446 | MS.gene23907:intron | 55.0% | |
| GTCGATATCGGGTCCACACT+TGG | + | chr4.4:20323174-20323193 | MS.gene23907:CDS | 55.0% | |
| TAGGGAAGAAGTCAGTGCCG+TGG | + | chr4.4:20320832-20320851 | MS.gene23907:CDS | 55.0% | |
| TCTTCCCTATCAGGCAGCTG+AGG | - | chr4.4:20320821-20320840 | None:intergenic | 55.0% | |
| !! | AGCGGTTTGGCCTTGCCAAA+CGG | + | chr4.4:20320179-20320198 | MS.gene23907:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 20319141 | 20323771 | 20319141 | ID=MS.gene23907 |
| chr4.4 | mRNA | 20319141 | 20323771 | 20319141 | ID=MS.gene23907.t1;Parent=MS.gene23907 |
| chr4.4 | exon | 20319141 | 20319257 | 20319141 | ID=MS.gene23907.t1.exon1;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20319141 | 20319257 | 20319141 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20319483 | 20319544 | 20319483 | ID=MS.gene23907.t1.exon2;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20319483 | 20319544 | 20319483 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20319688 | 20319882 | 20319688 | ID=MS.gene23907.t1.exon3;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20319688 | 20319882 | 20319688 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20320382 | 20320436 | 20320382 | ID=MS.gene23907.t1.exon4;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20320382 | 20320436 | 20320382 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20320638 | 20320853 | 20320638 | ID=MS.gene23907.t1.exon5;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20320638 | 20320853 | 20320638 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20320950 | 20321086 | 20320950 | ID=MS.gene23907.t1.exon6;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20320950 | 20321086 | 20320950 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20321379 | 20321571 | 20321379 | ID=MS.gene23907.t1.exon7;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20321379 | 20321571 | 20321379 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20321685 | 20321744 | 20321685 | ID=MS.gene23907.t1.exon8;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20321685 | 20321744 | 20321685 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20321826 | 20322068 | 20321826 | ID=MS.gene23907.t1.exon9;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20321826 | 20322068 | 20321826 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20322769 | 20323027 | 20322769 | ID=MS.gene23907.t1.exon10;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20322769 | 20323027 | 20322769 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20323131 | 20323336 | 20323131 | ID=MS.gene23907.t1.exon11;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20323131 | 20323336 | 20323131 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| chr4.4 | exon | 20323683 | 20323771 | 20323683 | ID=MS.gene23907.t1.exon12;Parent=MS.gene23907.t1 |
| chr4.4 | CDS | 20323683 | 20323771 | 20323683 | ID=cds.MS.gene23907.t1;Parent=MS.gene23907.t1 |
| Gene Sequence |
| Protein sequence |
