Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24825.t1 | XP_013458413.1 | 81.1 | 694 | 118 | 4 | 1 | 688 | 1 | 687 | 4.70E-279 | 970.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24825.t1 | Q8BH70 | 29.5 | 149 | 101 | 3 | 499 | 645 | 369 | 515 | 6.0e-09 | 64.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24825.t1 | A0A072URM6 | 81.1 | 694 | 118 | 4 | 1 | 688 | 1 | 687 | 3.4e-279 | 970.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051821 | MS.gene24825 | 0.959534 | 1.51E-117 | -1.69E-46 |
| MS.gene051823 | MS.gene24825 | 0.884289 | 2.18E-71 | -1.69E-46 |
| MS.gene055803 | MS.gene24825 | 0.839268 | 1.75E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24825.t1 | MTR_4g125440 | 93.391 | 696 | 29 | 6 | 1 | 688 | 1 | 687 | 0.0 | 1280 |
| MS.gene24825.t1 | MTR_4g125440 | 92.703 | 603 | 27 | 6 | 1 | 595 | 1 | 594 | 0.0 | 1093 |
| MS.gene24825.t1 | MTR_2g041610 | 52.648 | 623 | 254 | 11 | 82 | 688 | 95 | 692 | 0.0 | 593 |
| MS.gene24825.t1 | MTR_4g125410 | 84.591 | 318 | 49 | 0 | 371 | 688 | 134 | 451 | 0.0 | 531 |
| MS.gene24825.t1 | MTR_2g041610 | 49.529 | 531 | 227 | 11 | 82 | 596 | 95 | 600 | 1.90e-153 | 458 |
| MS.gene24825.t1 | MTR_4g125430 | 58.841 | 345 | 93 | 7 | 36 | 371 | 12 | 316 | 1.08e-109 | 335 |
| MS.gene24825.t1 | MTR_4g125390 | 43.454 | 359 | 163 | 9 | 209 | 564 | 32 | 353 | 1.80e-66 | 224 |
| MS.gene24825.t1 | MTR_4g125390 | 80.851 | 94 | 17 | 1 | 571 | 664 | 283 | 375 | 3.66e-39 | 149 |
| MS.gene24825.t1 | MTR_3g435660 | 56.109 | 221 | 78 | 4 | 134 | 354 | 46 | 247 | 1.17e-65 | 217 |
| MS.gene24825.t1 | MTR_1g114610 | 30.811 | 185 | 123 | 3 | 370 | 554 | 162 | 341 | 3.27e-14 | 75.9 |
| MS.gene24825.t1 | MTR_1g114610 | 23.448 | 290 | 164 | 5 | 412 | 670 | 95 | 357 | 1.79e-13 | 73.6 |
| MS.gene24825.t1 | MTR_2g021030 | 29.502 | 261 | 176 | 7 | 412 | 669 | 127 | 382 | 4.37e-14 | 75.5 |
| MS.gene24825.t1 | MTR_2g021030 | 30.208 | 288 | 188 | 9 | 370 | 655 | 142 | 418 | 1.64e-13 | 73.9 |
| MS.gene24825.t1 | MTR_3g088895 | 31.351 | 185 | 122 | 4 | 469 | 650 | 92 | 274 | 7.88e-14 | 73.9 |
| MS.gene24825.t1 | MTR_2g021030 | 29.502 | 261 | 176 | 7 | 412 | 669 | 127 | 382 | 7.99e-14 | 75.1 |
| MS.gene24825.t1 | MTR_2g021030 | 30.208 | 288 | 188 | 9 | 370 | 655 | 142 | 418 | 1.99e-13 | 73.9 |
| MS.gene24825.t1 | MTR_2g021030 | 28.030 | 264 | 182 | 6 | 392 | 653 | 288 | 545 | 5.38e-11 | 66.2 |
| MS.gene24825.t1 | MTR_1g029500 | 31.068 | 206 | 137 | 4 | 448 | 650 | 58 | 261 | 2.75e-13 | 72.4 |
| MS.gene24825.t1 | MTR_4g114650 | 26.357 | 258 | 182 | 7 | 398 | 650 | 302 | 556 | 1.79e-12 | 71.2 |
| MS.gene24825.t1 | MTR_3g107280 | 28.623 | 276 | 189 | 7 | 398 | 668 | 344 | 616 | 2.07e-12 | 70.9 |
| MS.gene24825.t1 | MTR_4g114650 | 26.357 | 258 | 182 | 7 | 398 | 650 | 306 | 560 | 2.28e-12 | 70.9 |
| MS.gene24825.t1 | MTR_4g114650 | 26.357 | 258 | 182 | 7 | 398 | 650 | 357 | 611 | 3.23e-12 | 70.5 |
| MS.gene24825.t1 | MTR_4g114640 | 25.969 | 258 | 183 | 6 | 398 | 650 | 336 | 590 | 2.33e-11 | 67.4 |
| MS.gene24825.t1 | MTR_1g054625 | 33.108 | 148 | 93 | 3 | 505 | 650 | 64 | 207 | 2.74e-11 | 64.7 |
| MS.gene24825.t1 | MTR_1g054625 | 33.108 | 148 | 93 | 3 | 505 | 650 | 161 | 304 | 3.15e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24825.t1 | AT2G06040 | 49.798 | 494 | 224 | 6 | 191 | 675 | 281 | 759 | 4.53e-153 | 462 |
| MS.gene24825.t1 | AT5G21900 | 41.294 | 402 | 235 | 1 | 284 | 684 | 140 | 541 | 1.85e-85 | 279 |
| MS.gene24825.t1 | AT5G21900 | 37.500 | 296 | 184 | 1 | 284 | 578 | 140 | 435 | 1.71e-49 | 179 |
| MS.gene24825.t1 | AT5G23340 | 26.606 | 327 | 193 | 11 | 369 | 687 | 99 | 386 | 2.62e-16 | 82.0 |
| MS.gene24825.t1 | AT1G21410 | 31.183 | 186 | 123 | 4 | 468 | 650 | 80 | 263 | 5.76e-16 | 80.5 |
| MS.gene24825.t1 | AT1G21410 | 31.183 | 186 | 123 | 4 | 468 | 650 | 80 | 263 | 5.76e-16 | 80.5 |
| MS.gene24825.t1 | AT1G77000 | 30.918 | 207 | 136 | 5 | 447 | 650 | 61 | 263 | 2.29e-12 | 69.7 |
| MS.gene24825.t1 | AT1G77000 | 30.000 | 220 | 141 | 8 | 459 | 669 | 43 | 258 | 7.42e-11 | 65.1 |
| MS.gene24825.t1 | AT1G77000 | 30.918 | 207 | 136 | 5 | 447 | 650 | 61 | 263 | 2.29e-12 | 69.7 |
| MS.gene24825.t1 | AT1G77000 | 30.000 | 220 | 141 | 8 | 459 | 669 | 43 | 258 | 7.42e-11 | 65.1 |
| MS.gene24825.t1 | AT4G15475 | 27.715 | 267 | 174 | 8 | 412 | 675 | 127 | 377 | 4.06e-11 | 66.6 |
Find 128 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGTGGTTTCTTGCCTTT+TGG | 0.196004 | 8.4:-9458519 | None:intergenic |
| GGAACATTGACTTAGATTTA+TGG | 0.211918 | 8.4:-9459707 | None:intergenic |
| TTGTTAAGGAATCCTTTATT+TGG | 0.218045 | 8.4:+9458952 | MS.gene24825:CDS |
| CTCTTGATCTTATGAACTTA+TGG | 0.218689 | 8.4:+9460278 | MS.gene24825:CDS |
| TGTTGTTGTTGGGTGGAATT+TGG | 0.223608 | 8.4:-9458207 | None:intergenic |
| AAATCAAATTTCATTGGATT+TGG | 0.235626 | 8.4:+9458623 | MS.gene24825:CDS |
| TTTGGTGAAGGGAAGGTTTA+GGG | 0.277701 | 8.4:+9458998 | MS.gene24825:CDS |
| AATATTCTGGCTGATTCATT+AGG | 0.302835 | 8.4:+9459751 | MS.gene24825:CDS |
| GCTTGCCGTCTTACTGATAA+GGG | 0.308427 | 8.4:+9459646 | MS.gene24825:CDS |
| ATGGGAGAATCAAGAGAAAA+TGG | 0.311651 | 8.4:-9458372 | None:intergenic |
| TGTTAAGGAATCCTTTATTT+GGG | 0.315948 | 8.4:+9458953 | MS.gene24825:CDS |
| ATTTGGTGAAGGGAAGGTTT+AGG | 0.331229 | 8.4:+9458997 | MS.gene24825:CDS |
| CTCGATCTGCAGAAATTTGA+CGG | 0.337852 | 8.4:+9460210 | MS.gene24825:intron |
| ACCTCTGCCGCAATCCATTC+AGG | 0.343022 | 8.4:+9460362 | MS.gene24825:CDS |
| GAAAAGGAACGGAGAAGATT+TGG | 0.343662 | 8.4:+9458980 | MS.gene24825:CDS |
| AACTTAGAGATTCAGATCAT+TGG | 0.344333 | 8.4:+9461620 | MS.gene24825:CDS |
| GTGGGTTTCCTACTCATATT+CGG | 0.345183 | 8.4:+9459177 | MS.gene24825:CDS |
| AGCTGAAAATCAAATTTCAT+TGG | 0.352025 | 8.4:+9458617 | MS.gene24825:CDS |
| GATTATACCAATTTCTTTGT+CGG | 0.358951 | 8.4:-9458316 | None:intergenic |
| GAAGAATTCACTAAATGTTT+CGG | 0.369076 | 8.4:+9459227 | MS.gene24825:CDS |
| TGTTGGGTGGAATTTGGATT+GGG | 0.369587 | 8.4:-9458201 | None:intergenic |
| AATTTGACAGACAATGAGTT+TGG | 0.369880 | 8.4:+9461398 | MS.gene24825:CDS |
| GATGGAATGGTTTCACTTGA+TGG | 0.377697 | 8.4:+9459068 | MS.gene24825:CDS |
| GGTTTCACTTGATGGTGTTT+CGG | 0.380171 | 8.4:+9459076 | MS.gene24825:CDS |
| TGCTTGCCGTCTTACTGATA+AGG | 0.380416 | 8.4:+9459645 | MS.gene24825:CDS |
| ATATGCTAGTCTTAATATTC+TGG | 0.383480 | 8.4:+9459738 | MS.gene24825:CDS |
| AAATTGACCGATTTAACTAT+AGG | 0.383538 | 8.4:+9460301 | MS.gene24825:CDS |
| TAATGTACATACCTCTAGTA+TGG | 0.392894 | 8.4:-9459264 | None:intergenic |
| AGAGACATTTCTTGCAAAGA+AGG | 0.395958 | 8.4:-9459023 | None:intergenic |
| TCTTTGATATGCTGCAATAA+AGG | 0.396565 | 8.4:-9461656 | None:intergenic |
| TGGAATTTGGATTGGGAATG+AGG | 0.398413 | 8.4:-9458194 | None:intergenic |
| TTCAATTCCTCTCTTGAGAA+AGG | 0.400326 | 8.4:-9458403 | None:intergenic |
| TTGTTGGGTGGAATTTGGAT+TGG | 0.405658 | 8.4:-9458202 | None:intergenic |
| ACTTAGAGATTCAGATCATT+GGG | 0.413780 | 8.4:+9461621 | MS.gene24825:CDS |
| AAGTTCTTCCAAGGATTTGC+CGG | 0.415989 | 8.4:-9460825 | None:intergenic |
| CACTAAATGTTTCGGAATGT+TGG | 0.424026 | 8.4:+9459235 | MS.gene24825:CDS |
| TTCTATCACAAAACAACTAA+AGG | 0.427212 | 8.4:+9458281 | MS.gene24825:CDS |
| TGATAAGGGGTTGCAGCTAC+TGG | 0.429928 | 8.4:+9459660 | MS.gene24825:CDS |
| AAGATATCCTATAGTTAAAT+CGG | 0.432326 | 8.4:-9460308 | None:intergenic |
| ACCTGAATGGATTGCGGCAG+AGG | 0.435528 | 8.4:-9460363 | None:intergenic |
| AAGAACAAGGTTGTTGTTGT+TGG | 0.435586 | 8.4:-9458218 | None:intergenic |
| TCGACACCATGACAGATCTA+AGG | 0.436932 | 8.4:-9461375 | None:intergenic |
| GCTTTGATTGCTTCAGAGAA+AGG | 0.436946 | 8.4:-9458891 | None:intergenic |
| CTTGAGAAAGGGCTCATGAA+TGG | 0.439348 | 8.4:-9458391 | None:intergenic |
| TGCATGTGGTCAGAATATTA+AGG | 0.440998 | 8.4:+9459924 | MS.gene24825:CDS |
| TGGAAGAGGTATAAGATTCA+TGG | 0.447198 | 8.4:-9458467 | None:intergenic |
| CCTTTATTTGGGTTCCGAAA+AGG | 0.447400 | 8.4:+9458964 | MS.gene24825:CDS |
| TAACGCAGAGCGCCTTGGTT+AGG | 0.449476 | 8.4:-9461686 | None:intergenic |
| TGATGCTGCACTAATCTTGT+CGG | 0.450638 | 8.4:+9459816 | MS.gene24825:CDS |
| TTCACTTAACAACATTAAGA+AGG | 0.453409 | 8.4:+9460847 | MS.gene24825:CDS |
| AGAGCGCCTTGGTTAGGATT+AGG | 0.461086 | 8.4:-9461680 | None:intergenic |
| TGCATTGTTTGCAAGTGATA+AGG | 0.463961 | 8.4:-9461339 | None:intergenic |
| TCTATCACAAAACAACTAAA+GGG | 0.466003 | 8.4:+9458282 | MS.gene24825:CDS |
| ACGTGTCAATTCGTAGAAAT+CGG | 0.472613 | 8.4:+9458721 | MS.gene24825:CDS |
| TTCGGCTTAAAGATTGCTCC+TGG | 0.473844 | 8.4:+9459195 | MS.gene24825:CDS |
| GGAGATGACCGGCAAATCCT+TGG | 0.478721 | 8.4:+9460817 | MS.gene24825:CDS |
| TCAATTCCTCTCTTGAGAAA+GGG | 0.482461 | 8.4:-9458402 | None:intergenic |
| GGAATTTGGATTGGGAATGA+GGG | 0.482803 | 8.4:-9458193 | None:intergenic |
| TTGAGAAAGGGCTCATGAAT+GGG | 0.486382 | 8.4:-9458390 | None:intergenic |
| AGAACAAGGTTGTTGTTGTT+GGG | 0.488686 | 8.4:-9458217 | None:intergenic |
| AGATCAAGAGCCTGCAGTCC+GGG | 0.489304 | 8.4:-9460265 | None:intergenic |
| ATTGCTTCAGAGAAAGGTGT+TGG | 0.491476 | 8.4:-9458885 | None:intergenic |
| CAATGAGTTTGGTTTAATTG+TGG | 0.494252 | 8.4:+9461409 | MS.gene24825:CDS |
| GAGTGGAGGAACAGAACAAT+TGG | 0.494440 | 8.4:-9458247 | None:intergenic |
| TGGATAGCTGTTTGTCGCTA+AGG | 0.496627 | 8.4:+9461429 | MS.gene24825:CDS |
| TGCTAACCATGCTGATGGAA+TGG | 0.498656 | 8.4:+9459055 | MS.gene24825:CDS |
| ACATGAAATTGACGATAACT+TGG | 0.501090 | 8.4:+9458833 | MS.gene24825:CDS |
| GGAACATTTGATGATGATGA+TGG | 0.502959 | 8.4:-9458351 | None:intergenic |
| ATTCTTGCTAACCATGCTGA+TGG | 0.505214 | 8.4:+9459050 | MS.gene24825:CDS |
| CAAACAAAGGCTTAGCGCAT+TGG | 0.507209 | 8.4:+9459106 | MS.gene24825:CDS |
| ATATACATTACTTTCTACAT+TGG | 0.509772 | 8.4:+9459573 | MS.gene24825:CDS |
| GTTAAGTGAAAGTTCTTCCA+AGG | 0.510904 | 8.4:-9460834 | None:intergenic |
| TACACACTGTCCCGGACTGC+AGG | 0.511413 | 8.4:+9460255 | MS.gene24825:CDS |
| AAGATCAAGAGCCTGCAGTC+CGG | 0.512184 | 8.4:-9460266 | None:intergenic |
| GTATAAGATTCATGGGGTAA+TGG | 0.515303 | 8.4:-9458459 | None:intergenic |
| GGAAGAGGTATAAGATTCAT+GGG | 0.515419 | 8.4:-9458466 | None:intergenic |
| ATGAATAACGCAGAGCGCCT+TGG | 0.517875 | 8.4:-9461691 | None:intergenic |
| TTCTTGAACTACTTCTAAGT+GGG | 0.518300 | 8.4:+9459159 | MS.gene24825:CDS |
| TTTCTTGAACTACTTCTAAG+TGG | 0.520179 | 8.4:+9459158 | MS.gene24825:CDS |
| ATAAACTTATCACAAACAGT+TGG | 0.520326 | 8.4:-9459886 | None:intergenic |
| AACGGAGAAGATTTGGTGAA+GGG | 0.523277 | 8.4:+9458987 | MS.gene24825:CDS |
| AAAACAAGAGACCACCTGAA+TGG | 0.533318 | 8.4:-9460376 | None:intergenic |
| GAACATTTGATGATGATGAT+GGG | 0.536864 | 8.4:-9458350 | None:intergenic |
| GTCATTGCTACACACTGTCC+CGG | 0.537095 | 8.4:+9460247 | MS.gene24825:CDS |
| TTAGAAGTGTTATCACTAGC+TGG | 0.543668 | 8.4:+9459859 | MS.gene24825:CDS |
| GAGAAGATTTGGTGAAGGGA+AGG | 0.547684 | 8.4:+9458991 | MS.gene24825:CDS |
| ACAAGGTTGTTGTTGTTGGG+TGG | 0.551660 | 8.4:-9458214 | None:intergenic |
| TTGATTAGTCTATCCCTCAC+TGG | 0.552362 | 8.4:+9459622 | MS.gene24825:CDS |
| TGCATACCTTAGATCTGTCA+TGG | 0.558362 | 8.4:+9461369 | MS.gene24825:CDS |
| AAGACTAGCATATGTGAGAA+GGG | 0.561550 | 8.4:-9459728 | None:intergenic |
| TAAGACTAGCATATGTGAGA+AGG | 0.562795 | 8.4:-9459729 | None:intergenic |
| CATGAGCCCTTTCTCAAGAG+AGG | 0.565578 | 8.4:+9458396 | MS.gene24825:CDS |
| ATCAATCTAGACAAGCAGCT+TGG | 0.566575 | 8.4:-9459604 | None:intergenic |
| CATGAAGTTGATGCTGATGA+TGG | 0.568513 | 8.4:+9458858 | MS.gene24825:CDS |
| GAATTCTTCCTCTGTCAACC+AGG | 0.572099 | 8.4:-9459213 | None:intergenic |
| ATTTGGGTTCCGAAAAGGAA+CGG | 0.581845 | 8.4:+9458969 | MS.gene24825:CDS |
| GAACGGAGAAGATTTGGTGA+AGG | 0.582661 | 8.4:+9458986 | MS.gene24825:CDS |
| CAATTCGTAGAAATCGGTAC+AGG | 0.584763 | 8.4:+9458727 | MS.gene24825:CDS |
| TGATGAAGATGATCAGAGGA+AGG | 0.587981 | 8.4:+9458590 | MS.gene24825:CDS |
| TCTTTAAGCCGAATATGAGT+AGG | 0.588830 | 8.4:-9459185 | None:intergenic |
| TTTCGGATGAGCTCAAACAA+AGG | 0.594265 | 8.4:+9459093 | MS.gene24825:CDS |
| AGGAACAGAACAATTGGAAG+AGG | 0.600540 | 8.4:-9458241 | None:intergenic |
| TTATCATCATCATCAATGAG+TGG | 0.602880 | 8.4:-9458534 | None:intergenic |
| CTTGCCGTCTTACTGATAAG+GGG | 0.612726 | 8.4:+9459647 | MS.gene24825:CDS |
| AAGACGGCAAGCACCAGTGA+GGG | 0.627353 | 8.4:-9459635 | None:intergenic |
| CAAGTGATAAGGTTGTCTGT+TGG | 0.628327 | 8.4:-9461328 | None:intergenic |
| CTGTTATAACTCGTCCACAC+TGG | 0.634753 | 8.4:-9459549 | None:intergenic |
| GTGAAACCATTCCATCAGCA+TGG | 0.636782 | 8.4:-9459061 | None:intergenic |
| GCAACCCCTTATCAGTAAGA+CGG | 0.637906 | 8.4:-9459651 | None:intergenic |
| GTTGGACACTTCCATACTAG+AGG | 0.638302 | 8.4:+9459253 | MS.gene24825:CDS |
| GAATCAACATCGCTGAGTGG+AGG | 0.643579 | 8.4:-9458261 | None:intergenic |
| GTGATGATGAAGATGATCAG+AGG | 0.644752 | 8.4:+9458586 | MS.gene24825:CDS |
| ACAAAACAACTAAAGGGTCA+CGG | 0.644979 | 8.4:+9458288 | MS.gene24825:CDS |
| AACATTTGATGATGATGATG+GGG | 0.645179 | 8.4:-9458349 | None:intergenic |
| AAGAGTTACATCATTGCATG+TGG | 0.660843 | 8.4:+9459910 | MS.gene24825:CDS |
| AAAGAGCCTAATCCTAACCA+AGG | 0.660986 | 8.4:+9461674 | MS.gene24825:CDS |
| AGATTGCTCCTGGTTGACAG+AGG | 0.662635 | 8.4:+9459205 | MS.gene24825:CDS |
| ACTGAAACTAATGATAGCGA+TGG | 0.669764 | 8.4:+9458675 | MS.gene24825:CDS |
| GAGACCACCTGAATGGATTG+CGG | 0.672864 | 8.4:-9460369 | None:intergenic |
| TGAAGATGATCATCATGCGG+CGG | 0.676628 | 8.4:+9458809 | MS.gene24825:CDS |
| ATTTCTACGAATTGACACGT+TGG | 0.678256 | 8.4:-9458718 | None:intergenic |
| CAATTGGAAGAGGAAGAACA+AGG | 0.693310 | 8.4:-9458231 | None:intergenic |
| TAAGACGGCAAGCACCAGTG+AGG | 0.700208 | 8.4:-9459636 | None:intergenic |
| GAATGAAGATGATCATCATG+CGG | 0.700277 | 8.4:+9458806 | MS.gene24825:CDS |
| ATCACTGTCACTGATAACGA+TGG | 0.706586 | 8.4:-9458568 | None:intergenic |
| ATAGAATCAACATCGCTGAG+TGG | 0.706856 | 8.4:-9458264 | None:intergenic |
| GAAGAGGTATAAGATTCATG+GGG | 0.715776 | 8.4:-9458465 | None:intergenic |
| GTGCTGCAACTTGACCAGTG+TGG | 0.740382 | 8.4:+9459535 | MS.gene24825:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTATATAAGTAAAGT+TGG | + | chr8.4:9461099-9461118 | MS.gene24825:intron | 10.0% |
| !!! | AAATATTTTCACAAAGTAAA+CGG | - | chr8.4:9460043-9460062 | None:intergenic | 15.0% |
| !!! | ATATTTTTTATTACTATGGT+CGG | + | chr8.4:9459492-9459511 | MS.gene24825:intron | 15.0% |
| !!! | GATGATATTTTTTATTACTA+TGG | + | chr8.4:9459488-9459507 | MS.gene24825:intron | 15.0% |
| !! | AAATATGACTATAATTTAGC+TGG | - | chr8.4:9461262-9461281 | None:intergenic | 20.0% |
| !! | AAATCAAATTTCATTGGATT+TGG | + | chr8.4:9458623-9458642 | MS.gene24825:CDS | 20.0% |
| !! | AAGATATCCTATAGTTAAAT+CGG | - | chr8.4:9460311-9460330 | None:intergenic | 20.0% |
| !! | ATATACATTACTTTCTACAT+TGG | + | chr8.4:9459573-9459592 | MS.gene24825:CDS | 20.0% |
| !! | ATGTGATAATATATTAGGAT+TGG | + | chr8.4:9460483-9460502 | MS.gene24825:intron | 20.0% |
| !! | CGTTTATGTGATAATATATT+AGG | + | chr8.4:9460478-9460497 | MS.gene24825:intron | 20.0% |
| !! | TGGTAATAAGATATATAGAA+TGG | - | chr8.4:9460663-9460682 | None:intergenic | 20.0% |
| !!! | AAAGAAATTAGTTGATTTGT+TGG | + | chr8.4:9461537-9461556 | MS.gene24825:intron | 20.0% |
| !!! | ACTATATCATTTTGTTTTCA+AGG | + | chr8.4:9460626-9460645 | MS.gene24825:intron | 20.0% |
| !!! | TTGTGTGAATATATTTTAGT+TGG | + | chr8.4:9459455-9459474 | MS.gene24825:intron | 20.0% |
| ! | AAAATTGTAACATGTTGTCA+AGG | + | chr8.4:9460951-9460970 | MS.gene24825:intron | 25.0% |
| ! | AAACTTATCATTTCGTCTAT+TGG | + | chr8.4:9460178-9460197 | MS.gene24825:intron | 25.0% |
| ! | AAGTTAAGTTATTCAGCAAT+TGG | - | chr8.4:9460759-9460778 | None:intergenic | 25.0% |
| ! | AGATAAACTATCATAAGAGT+TGG | - | chr8.4:9461074-9461093 | None:intergenic | 25.0% |
| ! | AGCTGAAAATCAAATTTCAT+TGG | + | chr8.4:9458617-9458636 | MS.gene24825:CDS | 25.0% |
| ! | ATAAAAGACATATGAATGAC+AGG | - | chr8.4:9459423-9459442 | None:intergenic | 25.0% |
| ! | ATAAACTTATCACAAACAGT+TGG | - | chr8.4:9459889-9459908 | None:intergenic | 25.0% |
| ! | GAAGAATTCACTAAATGTTT+CGG | + | chr8.4:9459227-9459246 | MS.gene24825:CDS | 25.0% |
| ! | GATTATACCAATTTCTTTGT+CGG | - | chr8.4:9458319-9458338 | None:intergenic | 25.0% |
| ! | TACTTGTTTCATATAGCATT+TGG | + | chr8.4:9459291-9459310 | MS.gene24825:intron | 25.0% |
| ! | TCTATCACAAAACAACTAAA+GGG | + | chr8.4:9458282-9458301 | MS.gene24825:CDS | 25.0% |
| ! | TTATTCAGCAATTGGAATTT+AGG | - | chr8.4:9460751-9460770 | None:intergenic | 25.0% |
| ! | TTCACTTAACAACATTAAGA+AGG | + | chr8.4:9460847-9460866 | MS.gene24825:CDS | 25.0% |
| ! | TTCTATCACAAAACAACTAA+AGG | + | chr8.4:9458281-9458300 | MS.gene24825:CDS | 25.0% |
| ! | TTGTTAAGGAATCCTTTATT+TGG | + | chr8.4:9458952-9458971 | MS.gene24825:CDS | 25.0% |
| !! | AAATTGACCGATTTAACTAT+AGG | + | chr8.4:9460301-9460320 | MS.gene24825:CDS | 25.0% |
| !! | CTTAAAACTCTACAACTTTT+TGG | + | chr8.4:9458494-9458513 | MS.gene24825:CDS | 25.0% |
| !! | GAAATTCTAGCACAAATTTT+AGG | - | chr8.4:9460079-9460098 | None:intergenic | 25.0% |
| !! | GAATATTGATTAGCTATTTG+AGG | + | chr8.4:9461188-9461207 | MS.gene24825:intron | 25.0% |
| !! | GAGTATTGCTATTATATGTA+TGG | + | chr8.4:9460508-9460527 | MS.gene24825:intron | 25.0% |
| !! | GTAACAAATGTTTTTCTCAA+CGG | + | chr8.4:9461590-9461609 | MS.gene24825:CDS | 25.0% |
| !! | TAACAAATGTTTTTCTCAAC+GGG | + | chr8.4:9461591-9461610 | MS.gene24825:CDS | 25.0% |
| !! | TGTTAAGGAATCCTTTATTT+GGG | + | chr8.4:9458953-9458972 | MS.gene24825:CDS | 25.0% |
| !! | TTGCTATTATATGTATGGAT+TGG | + | chr8.4:9460513-9460532 | MS.gene24825:intron | 25.0% |
| !! | TTTAACATTTGGTTTAATCC+AGG | + | chr8.4:9461301-9461320 | MS.gene24825:intron | 25.0% |
| !!! | ATATGCTAGTCTTAATATTC+TGG | + | chr8.4:9459738-9459757 | MS.gene24825:CDS | 25.0% |
| !!! | ATTATATGTATGGATTGGTA+TGG | + | chr8.4:9460518-9460537 | MS.gene24825:intron | 25.0% |
| !!! | ATTTTGTTTTCAAGGTTTTG+AGG | + | chr8.4:9460634-9460653 | MS.gene24825:intron | 25.0% |
| !!! | GTAATTTCTAGCTTTTTAGT+AGG | + | chr8.4:9460447-9460466 | MS.gene24825:intron | 25.0% |
| !!! | TAATTTTTCTAGTTCGAGAA+TGG | - | chr8.4:9460601-9460620 | None:intergenic | 25.0% |
| !!! | TGATACTGATTCTTTTTACA+TGG | + | chr8.4:9458434-9458453 | MS.gene24825:CDS | 25.0% |
| !!! | TTTTAAGTGAGTTATTGTGA+TGG | + | chr8.4:9460123-9460142 | MS.gene24825:intron | 25.0% |
| !!! | TTTTGAGTGTCTTTAACATT+TGG | + | chr8.4:9461290-9461309 | MS.gene24825:intron | 25.0% |
| AACTTAGAGATTCAGATCAT+TGG | + | chr8.4:9461620-9461639 | MS.gene24825:CDS | 30.0% | |
| AATTTGACAGACAATGAGTT+TGG | + | chr8.4:9461398-9461417 | MS.gene24825:CDS | 30.0% | |
| ACATATGAATGACAGGAATT+TGG | - | chr8.4:9459416-9459435 | None:intergenic | 30.0% | |
| ACATGAAATTGACGATAACT+TGG | + | chr8.4:9458833-9458852 | MS.gene24825:CDS | 30.0% | |
| ACTTAGAGATTCAGATCATT+GGG | + | chr8.4:9461621-9461640 | MS.gene24825:CDS | 30.0% | |
| ATTGCCAAAAGCAAGAAAAA+AGG | + | chr8.4:9458927-9458946 | MS.gene24825:CDS | 30.0% | |
| ATTGTTCGATCTTGATCAAA+TGG | + | chr8.4:9459355-9459374 | MS.gene24825:intron | 30.0% | |
| CTCTTGATCTTATGAACTTA+TGG | + | chr8.4:9460278-9460297 | MS.gene24825:CDS | 30.0% | |
| GCTAGAATTTCTTGTTAACA+AGG | + | chr8.4:9460088-9460107 | MS.gene24825:intron | 30.0% | |
| GGAACATTTATTTGTGGAAT+AGG | + | chr8.4:9459513-9459532 | MS.gene24825:intron | 30.0% | |
| TAATGTACATACCTCTAGTA+TGG | - | chr8.4:9459267-9459286 | None:intergenic | 30.0% | |
| TCTTTGATATGCTGCAATAA+AGG | - | chr8.4:9461659-9461678 | None:intergenic | 30.0% | |
| TTATCATCATCATCAATGAG+TGG | - | chr8.4:9458537-9458556 | None:intergenic | 30.0% | |
| TTCTTGAACTACTTCTAAGT+GGG | + | chr8.4:9459159-9459178 | MS.gene24825:CDS | 30.0% | |
| TTGAATGTTACTACTATTGC+AGG | + | chr8.4:9461568-9461587 | MS.gene24825:intron | 30.0% | |
| TTGCCAAAAGCAAGAAAAAA+GGG | + | chr8.4:9458928-9458947 | MS.gene24825:CDS | 30.0% | |
| TTTCTTGAACTACTTCTAAG+TGG | + | chr8.4:9459158-9459177 | MS.gene24825:CDS | 30.0% | |
| ! | AATATTCTGGCTGATTCATT+AGG | + | chr8.4:9459751-9459770 | MS.gene24825:CDS | 30.0% |
| ! | CAATGAGTTTGGTTTAATTG+TGG | + | chr8.4:9461409-9461428 | MS.gene24825:CDS | 30.0% |
| ! | CTAAGGTCACTTAAACTTTT+CGG | + | chr8.4:9461446-9461465 | MS.gene24825:CDS | 30.0% |
| ! | TCCTTAGTCTTTCATTCTTA+AGG | + | chr8.4:9460015-9460034 | MS.gene24825:intron | 30.0% |
| !! | AACATTTGATGATGATGATG+GGG | - | chr8.4:9458352-9458371 | None:intergenic | 30.0% |
| !! | GAACATTTGATGATGATGAT+GGG | - | chr8.4:9458353-9458372 | None:intergenic | 30.0% |
| !! | GGAACATTGACTTAGATTTA+TGG | - | chr8.4:9459710-9459729 | None:intergenic | 30.0% |
| !!! | GGTTTTTTGGGTATTTTGAT+TGG | - | chr8.4:9458175-9458194 | None:intergenic | 30.0% |
| !!! | TGGTATGGATTTTTTGCATT+TGG | + | chr8.4:9460533-9460552 | MS.gene24825:intron | 30.0% |
| !!! | TTTGGGTATTTTGATTGGTT+AGG | - | chr8.4:9458170-9458189 | None:intergenic | 30.0% |
| !!! | TTTTTTGCATTTGGAATGTC+AGG | + | chr8.4:9460542-9460561 | MS.gene24825:intron | 30.0% |
| AAGACTAGCATATGTGAGAA+GGG | - | chr8.4:9459731-9459750 | None:intergenic | 35.0% | |
| AAGAGTTACATCATTGCATG+TGG | + | chr8.4:9459910-9459929 | MS.gene24825:CDS | 35.0% | |
| ACAAAACAACTAAAGGGTCA+CGG | + | chr8.4:9458288-9458307 | MS.gene24825:CDS | 35.0% | |
| ACGTGTCAATTCGTAGAAAT+CGG | + | chr8.4:9458721-9458740 | MS.gene24825:CDS | 35.0% | |
| AGAGACATTTCTTGCAAAGA+AGG | - | chr8.4:9459026-9459045 | None:intergenic | 35.0% | |
| ATGGGAGAATCAAGAGAAAA+TGG | - | chr8.4:9458375-9458394 | None:intergenic | 35.0% | |
| ATGGTCGGAACATTTATTTG+TGG | + | chr8.4:9459507-9459526 | MS.gene24825:intron | 35.0% | |
| ATTTCTACGAATTGACACGT+TGG | - | chr8.4:9458721-9458740 | None:intergenic | 35.0% | |
| CAAGAAAAAAGGGGTTGTTA+AGG | + | chr8.4:9458938-9458957 | MS.gene24825:CDS | 35.0% | |
| CACTAAATGTTTCGGAATGT+TGG | + | chr8.4:9459235-9459254 | MS.gene24825:CDS | 35.0% | |
| GAATGAAGATGATCATCATG+CGG | + | chr8.4:9458806-9458825 | MS.gene24825:CDS | 35.0% | |
| GATCTGGTTGAAACTTAGAT+TGG | + | chr8.4:9460998-9461017 | MS.gene24825:intron | 35.0% | |
| GCCTTAAGAATGAAAGACTA+AGG | - | chr8.4:9460019-9460038 | None:intergenic | 35.0% | |
| GTATAAGATTCATGGGGTAA+TGG | - | chr8.4:9458462-9458481 | None:intergenic | 35.0% | |
| GTCAGGAATATTTCTTCATG+TGG | + | chr8.4:9460559-9460578 | MS.gene24825:intron | 35.0% | |
| GTTAAGTGAAAGTTCTTCCA+AGG | - | chr8.4:9460837-9460856 | None:intergenic | 35.0% | |
| TAAGACTAGCATATGTGAGA+AGG | - | chr8.4:9459732-9459751 | None:intergenic | 35.0% | |
| TCAATTCCTCTCTTGAGAAA+GGG | - | chr8.4:9458405-9458424 | None:intergenic | 35.0% | |
| TCTTTAAGCCGAATATGAGT+AGG | - | chr8.4:9459188-9459207 | None:intergenic | 35.0% | |
| TGCATGTGGTCAGAATATTA+AGG | + | chr8.4:9459924-9459943 | MS.gene24825:CDS | 35.0% | |
| TGCATTGTTTGCAAGTGATA+AGG | - | chr8.4:9461342-9461361 | None:intergenic | 35.0% | |
| TGCCAAAAGCAAGAAAAAAG+GGG | + | chr8.4:9458929-9458948 | MS.gene24825:CDS | 35.0% | |
| TGCTTATGAAAGGATTGATC+TGG | + | chr8.4:9460982-9461001 | MS.gene24825:intron | 35.0% | |
| TTCAATTCCTCTCTTGAGAA+AGG | - | chr8.4:9458406-9458425 | None:intergenic | 35.0% | |
| ! | AAATCTTCTCCGTTCCTTTT+CGG | - | chr8.4:9458981-9459000 | None:intergenic | 35.0% |
| ! | AAGAACAAGGTTGTTGTTGT+TGG | - | chr8.4:9458221-9458240 | None:intergenic | 35.0% |
| ! | ACATTTGGTTTAATCCAGGT+TGG | + | chr8.4:9461305-9461324 | MS.gene24825:intron | 35.0% |
| ! | ACTGAAACTAATGATAGCGA+TGG | + | chr8.4:9458675-9458694 | MS.gene24825:CDS | 35.0% |
| ! | AGAACAAGGTTGTTGTTGTT+GGG | - | chr8.4:9458220-9458239 | None:intergenic | 35.0% |
| ! | GAAGAGGTATAAGATTCATG+GGG | - | chr8.4:9458468-9458487 | None:intergenic | 35.0% |
| ! | GGAAGAGGTATAAGATTCAT+GGG | - | chr8.4:9458469-9458488 | None:intergenic | 35.0% |
| ! | GGTTTTTCCGACAAAGAAAT+TGG | + | chr8.4:9458309-9458328 | MS.gene24825:CDS | 35.0% |
| ! | TAAACTTTTCGGATGTTCAC+AGG | + | chr8.4:9461457-9461476 | MS.gene24825:CDS | 35.0% |
| ! | TACAACTTTTTGGACCCAAA+AGG | + | chr8.4:9458504-9458523 | MS.gene24825:CDS | 35.0% |
| ! | TGGAAGAGGTATAAGATTCA+TGG | - | chr8.4:9458470-9458489 | None:intergenic | 35.0% |
| !! | GGAACATTTGATGATGATGA+TGG | - | chr8.4:9458354-9458373 | None:intergenic | 35.0% |
| !! | GTGATTTGTTCTACTGTTTG+TGG | + | chr8.4:9461138-9461157 | MS.gene24825:intron | 35.0% |
| !! | TTAGAAGTGTTATCACTAGC+TGG | + | chr8.4:9459859-9459878 | MS.gene24825:CDS | 35.0% |
| !!! | AACCCCTTTTTTCTTGCTTT+TGG | - | chr8.4:9458934-9458953 | None:intergenic | 35.0% |
| !!! | ATTGGGAATGAGGGTTTTTT+GGG | - | chr8.4:9458187-9458206 | None:intergenic | 35.0% |
| !!! | TGAAGCAATTGCTGCTTTTT+TGG | + | chr8.4:9460796-9460815 | MS.gene24825:CDS | 35.0% |
| AAAACAAGAGACCACCTGAA+TGG | - | chr8.4:9460379-9460398 | None:intergenic | 40.0% | |
| AAAGAGCCTAATCCTAACCA+AGG | + | chr8.4:9461674-9461693 | MS.gene24825:CDS | 40.0% | |
| AAGTTCTTCCAAGGATTTGC+CGG | - | chr8.4:9460828-9460847 | None:intergenic | 40.0% | |
| AGGAACAGAACAATTGGAAG+AGG | - | chr8.4:9458244-9458263 | None:intergenic | 40.0% | |
| AGGTTAATGTTTCCGCTATC+TGG | + | chr8.4:9461208-9461227 | MS.gene24825:intron | 40.0% | |
| ATAGAATCAACATCGCTGAG+TGG | - | chr8.4:9458267-9458286 | None:intergenic | 40.0% | |
| ATCAATCTAGACAAGCAGCT+TGG | - | chr8.4:9459607-9459626 | None:intergenic | 40.0% | |
| ATTCTTGCTAACCATGCTGA+TGG | + | chr8.4:9459050-9459069 | MS.gene24825:CDS | 40.0% | |
| CAAGTGATAAGGTTGTCTGT+TGG | - | chr8.4:9461331-9461350 | None:intergenic | 40.0% | |
| CAATTCGTAGAAATCGGTAC+AGG | + | chr8.4:9458727-9458746 | MS.gene24825:CDS | 40.0% | |
| CAATTGGAAGAGGAAGAACA+AGG | - | chr8.4:9458234-9458253 | None:intergenic | 40.0% | |
| CTCGATCTGCAGAAATTTGA+CGG | + | chr8.4:9460210-9460229 | MS.gene24825:intron | 40.0% | |
| CTTGCCAAATGTCTCTCAAT+TGG | + | chr8.4:9460888-9460907 | MS.gene24825:intron | 40.0% | |
| GAAAAGGAACGGAGAAGATT+TGG | + | chr8.4:9458980-9458999 | MS.gene24825:CDS | 40.0% | |
| GATGGAATGGTTTCACTTGA+TGG | + | chr8.4:9459068-9459087 | MS.gene24825:CDS | 40.0% | |
| GCTAACTGAAAACCAGATAG+CGG | - | chr8.4:9461223-9461242 | None:intergenic | 40.0% | |
| GCTTTGATTGCTTCAGAGAA+AGG | - | chr8.4:9458894-9458913 | None:intergenic | 40.0% | |
| GGACAGATCATGATTACATG+CGG | - | chr8.4:9460730-9460749 | None:intergenic | 40.0% | |
| GTGGGTTTCCTACTCATATT+CGG | + | chr8.4:9459177-9459196 | MS.gene24825:CDS | 40.0% | |
| TGATGAAGATGATCAGAGGA+AGG | + | chr8.4:9458590-9458609 | MS.gene24825:CDS | 40.0% | |
| TGATGCTGCACTAATCTTGT+CGG | + | chr8.4:9459816-9459835 | MS.gene24825:CDS | 40.0% | |
| TGCATACCTTAGATCTGTCA+TGG | + | chr8.4:9461369-9461388 | MS.gene24825:CDS | 40.0% | |
| TGTTGGGTGGAATTTGGATT+GGG | - | chr8.4:9458204-9458223 | None:intergenic | 40.0% | |
| TTGAGAAAGGGCTCATGAAT+GGG | - | chr8.4:9458393-9458412 | None:intergenic | 40.0% | |
| TTGTTGGGTGGAATTTGGAT+TGG | - | chr8.4:9458205-9458224 | None:intergenic | 40.0% | |
| TTTCGGATGAGCTCAAACAA+AGG | + | chr8.4:9459093-9459112 | MS.gene24825:CDS | 40.0% | |
| TTTGGTGAAGGGAAGGTTTA+GGG | + | chr8.4:9458998-9459017 | MS.gene24825:CDS | 40.0% | |
| ! | ATCACTGTCACTGATAACGA+TGG | - | chr8.4:9458571-9458590 | None:intergenic | 40.0% |
| ! | ATGAGTGGTTTCTTGCCTTT+TGG | - | chr8.4:9458522-9458541 | None:intergenic | 40.0% |
| ! | ATTGCTTCAGAGAAAGGTGT+TGG | - | chr8.4:9458888-9458907 | None:intergenic | 40.0% |
| ! | ATTTGGGTTCCGAAAAGGAA+CGG | + | chr8.4:9458969-9458988 | MS.gene24825:CDS | 40.0% |
| ! | ATTTGGTGAAGGGAAGGTTT+AGG | + | chr8.4:9458997-9459016 | MS.gene24825:CDS | 40.0% |
| ! | CCTTTATTTGGGTTCCGAAA+AGG | + | chr8.4:9458964-9458983 | MS.gene24825:CDS | 40.0% |
| ! | CCTTTTCGGAACCCAAATAA+AGG | - | chr8.4:9458967-9458986 | None:intergenic | 40.0% |
| ! | GGAATTTGGATTGGGAATGA+GGG | - | chr8.4:9458196-9458215 | None:intergenic | 40.0% |
| ! | GTGATGATGAAGATGATCAG+AGG | + | chr8.4:9458586-9458605 | MS.gene24825:CDS | 40.0% |
| ! | TGAGTGGTTTCTTGCCTTTT+GGG | - | chr8.4:9458521-9458540 | None:intergenic | 40.0% |
| ! | TGGAATTTGGATTGGGAATG+AGG | - | chr8.4:9458197-9458216 | None:intergenic | 40.0% |
| ! | TGTTGTTGTTGGGTGGAATT+TGG | - | chr8.4:9458210-9458229 | None:intergenic | 40.0% |
| !! | AACGGAGAAGATTTGGTGAA+GGG | + | chr8.4:9458987-9459006 | MS.gene24825:CDS | 40.0% |
| !! | CATGAAGTTGATGCTGATGA+TGG | + | chr8.4:9458858-9458877 | MS.gene24825:CDS | 40.0% |
| !! | GGTTTCACTTGATGGTGTTT+CGG | + | chr8.4:9459076-9459095 | MS.gene24825:CDS | 40.0% |
| !! | TTGATTAGTCTATCCCTCAC+TGG | + | chr8.4:9459622-9459641 | MS.gene24825:CDS | 40.0% |
| !!! | GATTGGGAATGAGGGTTTTT+TGG | - | chr8.4:9458188-9458207 | None:intergenic | 40.0% |
| !!! | GTTGTAGAGTTTTAAGCGCT+TGG | - | chr8.4:9458490-9458509 | None:intergenic | 40.0% |
| CAAACAAAGGCTTAGCGCAT+TGG | + | chr8.4:9459106-9459125 | MS.gene24825:CDS | 45.0% | |
| CGAGCCAATTGAGAGACATT+TGG | - | chr8.4:9460895-9460914 | None:intergenic | 45.0% | |
| CTGTTATAACTCGTCCACAC+TGG | - | chr8.4:9459552-9459571 | None:intergenic | 45.0% | |
| CTTGAGAAAGGGCTCATGAA+TGG | - | chr8.4:9458394-9458413 | None:intergenic | 45.0% | |
| CTTGCCGTCTTACTGATAAG+GGG | + | chr8.4:9459647-9459666 | MS.gene24825:CDS | 45.0% | |
| GAATTCTTCCTCTGTCAACC+AGG | - | chr8.4:9459216-9459235 | None:intergenic | 45.0% | |
| GACACAATGCAGACGATACT+TGG | - | chr8.4:9460683-9460702 | None:intergenic | 45.0% | |
| GAGTGGAGGAACAGAACAAT+TGG | - | chr8.4:9458250-9458269 | None:intergenic | 45.0% | |
| GCAACCCCTTATCAGTAAGA+CGG | - | chr8.4:9459654-9459673 | None:intergenic | 45.0% | |
| GCTTGCCGTCTTACTGATAA+GGG | + | chr8.4:9459646-9459665 | MS.gene24825:CDS | 45.0% | |
| GGCTTCTCTGTGCTTATGAA+AGG | + | chr8.4:9460972-9460991 | MS.gene24825:intron | 45.0% | |
| GTGAAACCATTCCATCAGCA+TGG | - | chr8.4:9459064-9459083 | None:intergenic | 45.0% | |
| GTTGGACACTTCCATACTAG+AGG | + | chr8.4:9459253-9459272 | MS.gene24825:CDS | 45.0% | |
| TCGACACCATGACAGATCTA+AGG | - | chr8.4:9461378-9461397 | None:intergenic | 45.0% | |
| TGAAGATGATCATCATGCGG+CGG | + | chr8.4:9458809-9458828 | MS.gene24825:CDS | 45.0% | |
| TGCTAACCATGCTGATGGAA+TGG | + | chr8.4:9459055-9459074 | MS.gene24825:CDS | 45.0% | |
| TGCTTGCCGTCTTACTGATA+AGG | + | chr8.4:9459645-9459664 | MS.gene24825:CDS | 45.0% | |
| TGGATAGCTGTTTGTCGCTA+AGG | + | chr8.4:9461429-9461448 | MS.gene24825:CDS | 45.0% | |
| TTCGGCTTAAAGATTGCTCC+TGG | + | chr8.4:9459195-9459214 | MS.gene24825:CDS | 45.0% | |
| ! | ACAAGGTTGTTGTTGTTGGG+TGG | - | chr8.4:9458217-9458236 | None:intergenic | 45.0% |
| !! | GAACGGAGAAGATTTGGTGA+AGG | + | chr8.4:9458986-9459005 | MS.gene24825:CDS | 45.0% |
| !! | GAGAAGATTTGGTGAAGGGA+AGG | + | chr8.4:9458991-9459010 | MS.gene24825:CDS | 45.0% |
| !!! | GAGTTTTAAGCGCTTGGAAG+AGG | - | chr8.4:9458484-9458503 | None:intergenic | 45.0% |
| !!! | GCTGCTTTTTTGGAGATGAC+CGG | + | chr8.4:9460806-9460825 | MS.gene24825:CDS | 45.0% |
| AAGATCAAGAGCCTGCAGTC+CGG | - | chr8.4:9460269-9460288 | None:intergenic | 50.0% | |
| AGATTGCTCCTGGTTGACAG+AGG | + | chr8.4:9459205-9459224 | MS.gene24825:CDS | 50.0% | |
| CATGAGCCCTTTCTCAAGAG+AGG | + | chr8.4:9458396-9458415 | MS.gene24825:CDS | 50.0% | |
| GAATCAACATCGCTGAGTGG+AGG | - | chr8.4:9458264-9458283 | None:intergenic | 50.0% | |
| GTCATTGCTACACACTGTCC+CGG | + | chr8.4:9460247-9460266 | MS.gene24825:CDS | 50.0% | |
| GTGCGTACAGTCAGCTACAT+CGG | - | chr8.4:9459384-9459403 | None:intergenic | 50.0% | |
| TGATAAGGGGTTGCAGCTAC+TGG | + | chr8.4:9459660-9459679 | MS.gene24825:CDS | 50.0% | |
| ! | AGAGCGCCTTGGTTAGGATT+AGG | - | chr8.4:9461683-9461702 | None:intergenic | 50.0% |
| ! | ATGAATAACGCAGAGCGCCT+TGG | - | chr8.4:9461694-9461713 | None:intergenic | 50.0% |
| !! | GAGACCACCTGAATGGATTG+CGG | - | chr8.4:9460372-9460391 | None:intergenic | 50.0% |
| AAGACGGCAAGCACCAGTGA+GGG | - | chr8.4:9459638-9459657 | None:intergenic | 55.0% | |
| ACCTCTGCCGCAATCCATTC+AGG | + | chr8.4:9460362-9460381 | MS.gene24825:CDS | 55.0% | |
| AGATCAAGAGCCTGCAGTCC+GGG | - | chr8.4:9460268-9460287 | None:intergenic | 55.0% | |
| AGGTTGTCTGTTGGCCAACC+TGG | - | chr8.4:9461322-9461341 | None:intergenic | 55.0% | |
| CGTACAGTCAGCTACATCGG+TGG | - | chr8.4:9459381-9459400 | None:intergenic | 55.0% | |
| GGAGATGACCGGCAAATCCT+TGG | + | chr8.4:9460817-9460836 | MS.gene24825:CDS | 55.0% | |
| GTGCTGCAACTTGACCAGTG+TGG | + | chr8.4:9459535-9459554 | MS.gene24825:CDS | 55.0% | |
| TAAGACGGCAAGCACCAGTG+AGG | - | chr8.4:9459639-9459658 | None:intergenic | 55.0% | |
| TCTGCCGCAATCCATTCAGG+TGG | + | chr8.4:9460365-9460384 | MS.gene24825:intron | 55.0% | |
| ! | TAACGCAGAGCGCCTTGGTT+AGG | - | chr8.4:9461689-9461708 | None:intergenic | 55.0% |
| !! | ACCTGAATGGATTGCGGCAG+AGG | - | chr8.4:9460366-9460385 | None:intergenic | 55.0% |
| TACACACTGTCCCGGACTGC+AGG | + | chr8.4:9460255-9460274 | MS.gene24825:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 9458162 | 9461715 | 9458162 | ID=MS.gene24825 |
| chr8.4 | mRNA | 9458162 | 9461715 | 9458162 | ID=MS.gene24825.t1;Parent=MS.gene24825 |
| chr8.4 | exon | 9458162 | 9459274 | 9458162 | ID=MS.gene24825.t1.exon1;Parent=MS.gene24825.t1 |
| chr8.4 | CDS | 9458162 | 9459274 | 9458162 | ID=cds.MS.gene24825.t1;Parent=MS.gene24825.t1 |
| chr8.4 | exon | 9459535 | 9459968 | 9459535 | ID=MS.gene24825.t1.exon2;Parent=MS.gene24825.t1 |
| chr8.4 | CDS | 9459535 | 9459968 | 9459535 | ID=cds.MS.gene24825.t1;Parent=MS.gene24825.t1 |
| chr8.4 | exon | 9460222 | 9460383 | 9460222 | ID=MS.gene24825.t1.exon3;Parent=MS.gene24825.t1 |
| chr8.4 | CDS | 9460222 | 9460383 | 9460222 | ID=cds.MS.gene24825.t1;Parent=MS.gene24825.t1 |
| chr8.4 | exon | 9460793 | 9460868 | 9460793 | ID=MS.gene24825.t1.exon4;Parent=MS.gene24825.t1 |
| chr8.4 | CDS | 9460793 | 9460868 | 9460793 | ID=cds.MS.gene24825.t1;Parent=MS.gene24825.t1 |
| chr8.4 | exon | 9461323 | 9461478 | 9461323 | ID=MS.gene24825.t1.exon5;Parent=MS.gene24825.t1 |
| chr8.4 | CDS | 9461323 | 9461478 | 9461323 | ID=cds.MS.gene24825.t1;Parent=MS.gene24825.t1 |
| chr8.4 | exon | 9461590 | 9461715 | 9461590 | ID=MS.gene24825.t1.exon6;Parent=MS.gene24825.t1 |
| chr8.4 | CDS | 9461590 | 9461715 | 9461590 | ID=cds.MS.gene24825.t1;Parent=MS.gene24825.t1 |
| Gene Sequence |
| Protein sequence |
