Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051821.t1 | XP_013458413.1 | 81.4 | 694 | 116 | 4 | 1 | 688 | 1 | 687 | 8.00E-279 | 969.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051821.t1 | Q8BH70 | 29.5 | 149 | 101 | 3 | 499 | 645 | 369 | 515 | 6.0e-09 | 64.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051821.t1 | A0A072URM6 | 81.4 | 694 | 116 | 4 | 1 | 688 | 1 | 687 | 5.7e-279 | 969.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051821 | MS.gene051823 | 0.939225 | 1.82E-99 | -1.69E-46 |
| MS.gene051821 | MS.gene054641 | 0.8131 | 3.04E-51 | -1.69E-46 |
| MS.gene051821 | MS.gene054892 | 0.803413 | 3.53E-49 | -1.69E-46 |
| MS.gene051821 | MS.gene054893 | 0.803555 | 3.30E-49 | -1.69E-46 |
| MS.gene051821 | MS.gene055803 | 0.844844 | 5.88E-59 | -1.69E-46 |
| MS.gene051821 | MS.gene05624 | 0.800002 | 1.77E-48 | -1.69E-46 |
| MS.gene051821 | MS.gene060522 | 0.817217 | 3.70E-52 | -1.69E-46 |
| MS.gene051821 | MS.gene066879 | 0.828345 | 9.47E-55 | -1.69E-46 |
| MS.gene051821 | MS.gene069807 | 0.800869 | 1.18E-48 | -1.69E-46 |
| MS.gene051821 | MS.gene072325 | 0.81608 | 6.65E-52 | -1.69E-46 |
| MS.gene051821 | MS.gene072326 | 0.835631 | 1.50E-56 | -1.69E-46 |
| MS.gene051821 | MS.gene24824 | 0.94817 | 1.60E-106 | -1.69E-46 |
| MS.gene051821 | MS.gene24825 | 0.959534 | 1.51E-117 | -1.69E-46 |
| MS.gene051821 | MS.gene30961 | 0.806908 | 6.54E-50 | -1.69E-46 |
| MS.gene051821 | MS.gene32929 | 0.823105 | 1.66E-53 | -1.69E-46 |
| MS.gene051821 | MS.gene38542 | 0.813215 | 2.87E-51 | -1.69E-46 |
| MS.gene051821 | MS.gene39347 | 0.821976 | 3.03E-53 | -1.69E-46 |
| MS.gene051821 | MS.gene43381 | 0.807817 | 4.20E-50 | -1.69E-46 |
| MS.gene051821 | MS.gene56876 | 0.805874 | 1.08E-49 | -1.69E-46 |
| MS.gene051821 | MS.gene68028 | 0.806934 | 6.46E-50 | -1.69E-46 |
| MS.gene051821 | MS.gene69750 | 0.840376 | 9.02E-58 | -1.69E-46 |
| MS.gene051821 | MS.gene73678 | 0.816193 | 6.27E-52 | -1.69E-46 |
| MS.gene051821 | MS.gene75798 | 0.806763 | 7.02E-50 | -1.69E-46 |
| MS.gene051821 | MS.gene76884 | 0.806111 | 9.64E-50 | -1.69E-46 |
| MS.gene051821 | MS.gene78366 | 0.818126 | 2.31E-52 | -1.69E-46 |
| MS.gene051821 | MS.gene80557 | 0.821678 | 3.55E-53 | -1.69E-46 |
| MS.gene051821 | MS.gene80558 | 0.820113 | 8.14E-53 | -1.69E-46 |
| MS.gene051821 | MS.gene84703 | 0.803801 | 2.93E-49 | -1.69E-46 |
| MS.gene051821 | MS.gene84734 | 0.807054 | 6.10E-50 | -1.69E-46 |
| MS.gene051821 | MS.gene90922 | 0.81317 | 2.93E-51 | -1.69E-46 |
| MS.gene051821 | MS.gene92076 | 0.837782 | 4.24E-57 | -1.69E-46 |
| MS.gene051821 | MS.gene99431 | 0.804748 | 1.86E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051821.t1 | MTR_4g125440 | 93.247 | 696 | 30 | 6 | 1 | 688 | 1 | 687 | 0.0 | 1278 |
| MS.gene051821.t1 | MTR_4g125440 | 92.537 | 603 | 28 | 6 | 1 | 595 | 1 | 594 | 0.0 | 1090 |
| MS.gene051821.t1 | MTR_2g041610 | 52.648 | 623 | 254 | 11 | 82 | 688 | 95 | 692 | 0.0 | 593 |
| MS.gene051821.t1 | MTR_4g125410 | 84.591 | 318 | 49 | 0 | 371 | 688 | 134 | 451 | 0.0 | 531 |
| MS.gene051821.t1 | MTR_2g041610 | 49.529 | 531 | 227 | 11 | 82 | 596 | 95 | 600 | 3.36e-153 | 457 |
| MS.gene051821.t1 | MTR_4g125430 | 58.841 | 345 | 93 | 7 | 36 | 371 | 12 | 316 | 2.30e-110 | 337 |
| MS.gene051821.t1 | MTR_4g125390 | 43.454 | 359 | 163 | 9 | 209 | 564 | 32 | 353 | 1.57e-66 | 224 |
| MS.gene051821.t1 | MTR_4g125390 | 80.851 | 94 | 17 | 1 | 571 | 664 | 283 | 375 | 3.49e-39 | 149 |
| MS.gene051821.t1 | MTR_3g435660 | 56.109 | 221 | 78 | 4 | 134 | 354 | 46 | 247 | 1.19e-65 | 217 |
| MS.gene051821.t1 | MTR_1g114610 | 30.811 | 185 | 123 | 3 | 370 | 554 | 162 | 341 | 3.67e-14 | 75.5 |
| MS.gene051821.t1 | MTR_1g114610 | 23.448 | 290 | 164 | 5 | 412 | 670 | 95 | 357 | 2.05e-13 | 73.2 |
| MS.gene051821.t1 | MTR_2g021030 | 29.502 | 261 | 176 | 7 | 412 | 669 | 127 | 382 | 4.69e-14 | 75.5 |
| MS.gene051821.t1 | MTR_2g021030 | 30.208 | 288 | 188 | 9 | 370 | 655 | 142 | 418 | 1.84e-13 | 73.6 |
| MS.gene051821.t1 | MTR_3g088895 | 31.351 | 185 | 122 | 4 | 469 | 650 | 92 | 274 | 8.10e-14 | 73.9 |
| MS.gene051821.t1 | MTR_2g021030 | 29.502 | 261 | 176 | 7 | 412 | 669 | 127 | 382 | 8.94e-14 | 75.1 |
| MS.gene051821.t1 | MTR_2g021030 | 30.208 | 288 | 188 | 9 | 370 | 655 | 142 | 418 | 2.40e-13 | 73.9 |
| MS.gene051821.t1 | MTR_2g021030 | 28.030 | 264 | 182 | 6 | 392 | 653 | 288 | 545 | 6.12e-11 | 66.2 |
| MS.gene051821.t1 | MTR_1g029500 | 31.068 | 206 | 137 | 4 | 448 | 650 | 58 | 261 | 2.34e-13 | 72.4 |
| MS.gene051821.t1 | MTR_4g114650 | 26.357 | 258 | 182 | 7 | 398 | 650 | 302 | 556 | 1.82e-12 | 71.2 |
| MS.gene051821.t1 | MTR_3g107280 | 28.623 | 276 | 189 | 7 | 398 | 668 | 344 | 616 | 2.17e-12 | 70.9 |
| MS.gene051821.t1 | MTR_4g114650 | 26.357 | 258 | 182 | 7 | 398 | 650 | 306 | 560 | 2.30e-12 | 70.9 |
| MS.gene051821.t1 | MTR_4g114650 | 26.357 | 258 | 182 | 7 | 398 | 650 | 357 | 611 | 2.94e-12 | 70.5 |
| MS.gene051821.t1 | MTR_1g054625 | 33.108 | 148 | 93 | 3 | 505 | 650 | 64 | 207 | 2.82e-11 | 64.7 |
| MS.gene051821.t1 | MTR_4g114640 | 25.969 | 258 | 183 | 6 | 398 | 650 | 336 | 590 | 2.84e-11 | 67.0 |
| MS.gene051821.t1 | MTR_1g054625 | 33.108 | 148 | 93 | 3 | 505 | 650 | 161 | 304 | 3.18e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051821.t1 | AT2G06040 | 49.798 | 494 | 224 | 6 | 191 | 675 | 281 | 759 | 5.43e-153 | 462 |
| MS.gene051821.t1 | AT5G21900 | 41.294 | 402 | 235 | 1 | 284 | 684 | 140 | 541 | 1.66e-85 | 279 |
| MS.gene051821.t1 | AT5G21900 | 37.500 | 296 | 184 | 1 | 284 | 578 | 140 | 435 | 1.83e-49 | 179 |
| MS.gene051821.t1 | AT5G23340 | 26.606 | 327 | 193 | 11 | 369 | 687 | 99 | 386 | 2.79e-16 | 82.0 |
| MS.gene051821.t1 | AT1G21410 | 31.183 | 186 | 123 | 4 | 468 | 650 | 80 | 263 | 5.61e-16 | 80.5 |
| MS.gene051821.t1 | AT1G21410 | 31.183 | 186 | 123 | 4 | 468 | 650 | 80 | 263 | 5.61e-16 | 80.5 |
| MS.gene051821.t1 | AT1G77000 | 30.918 | 207 | 136 | 5 | 447 | 650 | 61 | 263 | 2.24e-12 | 69.7 |
| MS.gene051821.t1 | AT1G77000 | 30.000 | 220 | 141 | 8 | 459 | 669 | 43 | 258 | 7.03e-11 | 65.1 |
| MS.gene051821.t1 | AT1G77000 | 30.918 | 207 | 136 | 5 | 447 | 650 | 61 | 263 | 2.24e-12 | 69.7 |
| MS.gene051821.t1 | AT1G77000 | 30.000 | 220 | 141 | 8 | 459 | 669 | 43 | 258 | 7.03e-11 | 65.1 |
| MS.gene051821.t1 | AT4G15475 | 27.715 | 267 | 174 | 8 | 412 | 675 | 127 | 377 | 4.58e-11 | 66.6 |
Find 128 sgRNAs with CRISPR-Local
Find 207 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGAGTGGTTTCTTGCCTTT+TGG | 0.196004 | 8.2:-7281254 | None:intergenic |
| GGAACATTGACTTAGATTTA+TGG | 0.211918 | 8.2:-7282442 | None:intergenic |
| TTGTTAAGGAATCCTTTATT+TGG | 0.218045 | 8.2:+7281687 | MS.gene051821:CDS |
| CTCTTGATCTTATGAACTTA+TGG | 0.218689 | 8.2:+7283013 | MS.gene051821:CDS |
| TGTTGTTGTTGGGTGGAATT+TGG | 0.223608 | 8.2:-7280942 | None:intergenic |
| AAATCAAATTTCATTGGATT+TGG | 0.235626 | 8.2:+7281358 | MS.gene051821:CDS |
| TTTGGTGAAGGGAAGGTTTA+GGG | 0.277701 | 8.2:+7281733 | MS.gene051821:CDS |
| AATATTCTGGCTGATTCATT+AGG | 0.302835 | 8.2:+7282486 | MS.gene051821:CDS |
| GCTTGCCGTCTTACTGATAA+GGG | 0.308427 | 8.2:+7282381 | MS.gene051821:CDS |
| ATGGGAGAATCAAGAGAAAA+TGG | 0.311651 | 8.2:-7281107 | None:intergenic |
| TGTTAAGGAATCCTTTATTT+GGG | 0.315948 | 8.2:+7281688 | MS.gene051821:CDS |
| ATTTGGTGAAGGGAAGGTTT+AGG | 0.331229 | 8.2:+7281732 | MS.gene051821:CDS |
| CTCGATCTGCAGAAATTTGA+CGG | 0.337852 | 8.2:+7282945 | MS.gene051821:intron |
| ACCTCTGCCGCAATCCATTC+AGG | 0.343022 | 8.2:+7283097 | MS.gene051821:CDS |
| GAAAAGGAACGGAGAAGATT+TGG | 0.343662 | 8.2:+7281715 | MS.gene051821:CDS |
| AACTTAGAGATTCAGATCAT+TGG | 0.344333 | 8.2:+7284355 | MS.gene051821:CDS |
| GTGGGTTTCCTACTCATATT+CGG | 0.345183 | 8.2:+7281912 | MS.gene051821:CDS |
| AGCTGAAAATCAAATTTCAT+TGG | 0.352025 | 8.2:+7281352 | MS.gene051821:CDS |
| GATTATACCAATTTCTTTGT+CGG | 0.358951 | 8.2:-7281051 | None:intergenic |
| GAAGAATTCACTAAATGTTT+CGG | 0.369076 | 8.2:+7281962 | MS.gene051821:CDS |
| TGTTGGGTGGAATTTGGATT+GGG | 0.369587 | 8.2:-7280936 | None:intergenic |
| AATTTGACAGACAATGAGTT+TGG | 0.369880 | 8.2:+7284133 | MS.gene051821:CDS |
| GATGGAATGGTTTCACTTGA+TGG | 0.377697 | 8.2:+7281803 | MS.gene051821:CDS |
| GGTTTCACTTGATGGTGTTT+CGG | 0.380171 | 8.2:+7281811 | MS.gene051821:CDS |
| TGCTTGCCGTCTTACTGATA+AGG | 0.380416 | 8.2:+7282380 | MS.gene051821:CDS |
| ATATGCTAGTCTTAATATTC+TGG | 0.383480 | 8.2:+7282473 | MS.gene051821:CDS |
| AAATTGACCGATTTAACTAT+AGG | 0.383538 | 8.2:+7283036 | MS.gene051821:CDS |
| TAATGTACATACCTCTAGTA+TGG | 0.392894 | 8.2:-7281999 | None:intergenic |
| AGAGACATTTCTTGCAAAGA+AGG | 0.395958 | 8.2:-7281758 | None:intergenic |
| TCTTTGATATGCTGCAATAA+AGG | 0.396565 | 8.2:-7284391 | None:intergenic |
| TGGAATTTGGATTGGGAATG+AGG | 0.398413 | 8.2:-7280929 | None:intergenic |
| TTCAATTCCTCTCTTGAGAA+AGG | 0.400326 | 8.2:-7281138 | None:intergenic |
| TTGTTGGGTGGAATTTGGAT+TGG | 0.405658 | 8.2:-7280937 | None:intergenic |
| ACTTAGAGATTCAGATCATT+GGG | 0.413780 | 8.2:+7284356 | MS.gene051821:CDS |
| AAGTTCTTCCAAGGATTTGC+CGG | 0.415989 | 8.2:-7283560 | None:intergenic |
| CACTAAATGTTTCGGAATGT+TGG | 0.424026 | 8.2:+7281970 | MS.gene051821:CDS |
| TTCTATCACAAAACAACTAA+AGG | 0.427212 | 8.2:+7281016 | MS.gene051821:CDS |
| TGATAAGGGGTTGCAGCTAC+TGG | 0.429928 | 8.2:+7282395 | MS.gene051821:CDS |
| AAGATATCCTATAGTTAAAT+CGG | 0.432326 | 8.2:-7283043 | None:intergenic |
| ACCTGAATGGATTGCGGCAG+AGG | 0.435528 | 8.2:-7283098 | None:intergenic |
| AAGAACAAGGTTGTTGTTGT+TGG | 0.435586 | 8.2:-7280953 | None:intergenic |
| TCGACACCATGACAGATCTA+AGG | 0.436932 | 8.2:-7284110 | None:intergenic |
| GCTTTGATTGCTTCAGAGAA+AGG | 0.436946 | 8.2:-7281626 | None:intergenic |
| CTTGAGAAAGGGCTCATGAA+TGG | 0.439348 | 8.2:-7281126 | None:intergenic |
| TGCATGTGGTCAGAATATTA+AGG | 0.440998 | 8.2:+7282659 | MS.gene051821:CDS |
| CCTTTATTTGGGTTCCGAAA+AGG | 0.447400 | 8.2:+7281699 | MS.gene051821:CDS |
| TAACGCAGAGCGCCTTGGTT+AGG | 0.449476 | 8.2:-7284421 | None:intergenic |
| TGATGCTGCACTAATCTTGT+CGG | 0.450638 | 8.2:+7282551 | MS.gene051821:CDS |
| TTCACTTAACAACATTAAGA+AGG | 0.453409 | 8.2:+7283582 | MS.gene051821:CDS |
| AGAGCGCCTTGGTTAGGATT+AGG | 0.461086 | 8.2:-7284415 | None:intergenic |
| TGCATTGTTTGCAAGTGATA+AGG | 0.463961 | 8.2:-7284074 | None:intergenic |
| TCTATCACAAAACAACTAAA+GGG | 0.466003 | 8.2:+7281017 | MS.gene051821:CDS |
| TGGAAGAGGAAGAAGATTCA+TGG | 0.466185 | 8.2:-7281202 | None:intergenic |
| ACGTGTCAATTCGTAGAAAT+CGG | 0.472613 | 8.2:+7281456 | MS.gene051821:CDS |
| TTCGGCTTAAAGATTGCTCC+TGG | 0.473844 | 8.2:+7281930 | MS.gene051821:CDS |
| GGAGATGACCGGCAAATCCT+TGG | 0.478721 | 8.2:+7283552 | MS.gene051821:CDS |
| TCAATTCCTCTCTTGAGAAA+GGG | 0.482461 | 8.2:-7281137 | None:intergenic |
| GGAATTTGGATTGGGAATGA+GGG | 0.482803 | 8.2:-7280928 | None:intergenic |
| TTGAGAAAGGGCTCATGAAT+GGG | 0.486382 | 8.2:-7281125 | None:intergenic |
| AGAACAAGGTTGTTGTTGTT+GGG | 0.488686 | 8.2:-7280952 | None:intergenic |
| AGATCAAGAGCCTGCAGTCC+GGG | 0.489304 | 8.2:-7283000 | None:intergenic |
| ATTGCTTCAGAGAAAGGTGT+TGG | 0.491476 | 8.2:-7281620 | None:intergenic |
| CAATGAGTTTGGTTTAATTG+TGG | 0.494252 | 8.2:+7284144 | MS.gene051821:CDS |
| GAGTGGAGGAACAGAACAAT+TGG | 0.494440 | 8.2:-7280982 | None:intergenic |
| TGGATAGCTGTTTGTCGCTA+AGG | 0.496627 | 8.2:+7284164 | MS.gene051821:CDS |
| GAAGAAGATTCATGGGGTAA+TGG | 0.497567 | 8.2:-7281194 | None:intergenic |
| TGCTAACCATGCTGATGGAA+TGG | 0.498656 | 8.2:+7281790 | MS.gene051821:CDS |
| ACATGAAATTGACGATAACT+TGG | 0.501090 | 8.2:+7281568 | MS.gene051821:CDS |
| GGAACATTTGATGATGATGA+TGG | 0.502959 | 8.2:-7281086 | None:intergenic |
| ATTCTTGCTAACCATGCTGA+TGG | 0.505214 | 8.2:+7281785 | MS.gene051821:CDS |
| CAAACAAAGGCTTAGCGCAT+TGG | 0.507209 | 8.2:+7281841 | MS.gene051821:CDS |
| ATATACATTACTTTCTACAT+TGG | 0.509772 | 8.2:+7282308 | MS.gene051821:CDS |
| GTTAAGTGAAAGTTCTTCCA+AGG | 0.510904 | 8.2:-7283569 | None:intergenic |
| TACACACTGTCCCGGACTGC+AGG | 0.511413 | 8.2:+7282990 | MS.gene051821:CDS |
| AAGATCAAGAGCCTGCAGTC+CGG | 0.512184 | 8.2:-7283001 | None:intergenic |
| ATGAATAACGCAGAGCGCCT+TGG | 0.517875 | 8.2:-7284426 | None:intergenic |
| TTCTTGAACTACTTCTAAGT+GGG | 0.518300 | 8.2:+7281894 | MS.gene051821:CDS |
| TTTCTTGAACTACTTCTAAG+TGG | 0.520179 | 8.2:+7281893 | MS.gene051821:CDS |
| ATAAACTTATCACAAACAGT+TGG | 0.520326 | 8.2:-7282621 | None:intergenic |
| AACGGAGAAGATTTGGTGAA+GGG | 0.523277 | 8.2:+7281722 | MS.gene051821:CDS |
| AAAACAAGAGACCACCTGAA+TGG | 0.533318 | 8.2:-7283111 | None:intergenic |
| GAACATTTGATGATGATGAT+GGG | 0.536864 | 8.2:-7281085 | None:intergenic |
| GTCATTGCTACACACTGTCC+CGG | 0.537095 | 8.2:+7282982 | MS.gene051821:CDS |
| TTAGAAGTGTTATCACTAGC+TGG | 0.543668 | 8.2:+7282594 | MS.gene051821:CDS |
| GGAAGAGGAAGAAGATTCAT+GGG | 0.544879 | 8.2:-7281201 | None:intergenic |
| GAGAAGATTTGGTGAAGGGA+AGG | 0.547684 | 8.2:+7281726 | MS.gene051821:CDS |
| ACAAGGTTGTTGTTGTTGGG+TGG | 0.551660 | 8.2:-7280949 | None:intergenic |
| TTGATTAGTCTATCCCTCAC+TGG | 0.552362 | 8.2:+7282357 | MS.gene051821:CDS |
| TGCATACCTTAGATCTGTCA+TGG | 0.558362 | 8.2:+7284104 | MS.gene051821:CDS |
| AAGACTAGCATATGTGAGAA+GGG | 0.561550 | 8.2:-7282463 | None:intergenic |
| TAAGACTAGCATATGTGAGA+AGG | 0.562795 | 8.2:-7282464 | None:intergenic |
| CATGAGCCCTTTCTCAAGAG+AGG | 0.565578 | 8.2:+7281131 | MS.gene051821:CDS |
| ATCAATCTAGACAAGCAGCT+TGG | 0.566575 | 8.2:-7282339 | None:intergenic |
| CATGAAGTTGATGCTGATGA+TGG | 0.568513 | 8.2:+7281593 | MS.gene051821:CDS |
| GAATTCTTCCTCTGTCAACC+AGG | 0.572099 | 8.2:-7281948 | None:intergenic |
| ATTTGGGTTCCGAAAAGGAA+CGG | 0.581845 | 8.2:+7281704 | MS.gene051821:CDS |
| GAACGGAGAAGATTTGGTGA+AGG | 0.582661 | 8.2:+7281721 | MS.gene051821:CDS |
| CAATTCGTAGAAATCGGTAC+AGG | 0.584763 | 8.2:+7281462 | MS.gene051821:CDS |
| TGATGAAGATGATCAGAGGA+AGG | 0.587981 | 8.2:+7281325 | MS.gene051821:CDS |
| TCTTTAAGCCGAATATGAGT+AGG | 0.588830 | 8.2:-7281920 | None:intergenic |
| TTTCGGATGAGCTCAAACAA+AGG | 0.594265 | 8.2:+7281828 | MS.gene051821:CDS |
| AGGAACAGAACAATTGGAAG+AGG | 0.600540 | 8.2:-7280976 | None:intergenic |
| TTATCATCATCATCAATGAG+TGG | 0.602880 | 8.2:-7281269 | None:intergenic |
| CTTGCCGTCTTACTGATAAG+GGG | 0.612726 | 8.2:+7282382 | MS.gene051821:CDS |
| AAGACGGCAAGCACCAGTGA+GGG | 0.627353 | 8.2:-7282370 | None:intergenic |
| CAAGTGATAAGGTTGTCTGT+TGG | 0.628327 | 8.2:-7284063 | None:intergenic |
| CTGTTATAACTCGTCCACAC+TGG | 0.634753 | 8.2:-7282284 | None:intergenic |
| GTGAAACCATTCCATCAGCA+TGG | 0.636782 | 8.2:-7281796 | None:intergenic |
| GCAACCCCTTATCAGTAAGA+CGG | 0.637906 | 8.2:-7282386 | None:intergenic |
| GTTGGACACTTCCATACTAG+AGG | 0.638302 | 8.2:+7281988 | MS.gene051821:CDS |
| GAATCAACATCGCTGAGTGG+AGG | 0.643579 | 8.2:-7280996 | None:intergenic |
| GTGATGATGAAGATGATCAG+AGG | 0.644752 | 8.2:+7281321 | MS.gene051821:CDS |
| ACAAAACAACTAAAGGGTCA+CGG | 0.644979 | 8.2:+7281023 | MS.gene051821:CDS |
| AACATTTGATGATGATGATG+GGG | 0.645179 | 8.2:-7281084 | None:intergenic |
| AAGAGTTACATCATTGCATG+TGG | 0.660843 | 8.2:+7282645 | MS.gene051821:CDS |
| AAAGAGCCTAATCCTAACCA+AGG | 0.660986 | 8.2:+7284409 | MS.gene051821:CDS |
| AGATTGCTCCTGGTTGACAG+AGG | 0.662635 | 8.2:+7281940 | MS.gene051821:CDS |
| ACTGAAACTAATGATAGCGA+TGG | 0.669764 | 8.2:+7281410 | MS.gene051821:CDS |
| GAGACCACCTGAATGGATTG+CGG | 0.672864 | 8.2:-7283104 | None:intergenic |
| TGAAGATGATCATCATGCGG+CGG | 0.676628 | 8.2:+7281544 | MS.gene051821:CDS |
| ATTTCTACGAATTGACACGT+TGG | 0.678256 | 8.2:-7281453 | None:intergenic |
| CAATTGGAAGAGGAAGAACA+AGG | 0.693310 | 8.2:-7280966 | None:intergenic |
| TAAGACGGCAAGCACCAGTG+AGG | 0.700208 | 8.2:-7282371 | None:intergenic |
| GAATGAAGATGATCATCATG+CGG | 0.700277 | 8.2:+7281541 | MS.gene051821:CDS |
| GAAGAGGAAGAAGATTCATG+GGG | 0.700863 | 8.2:-7281200 | None:intergenic |
| ATCACTGTCACTGATAACGA+TGG | 0.706586 | 8.2:-7281303 | None:intergenic |
| ATAGAATCAACATCGCTGAG+TGG | 0.706856 | 8.2:-7280999 | None:intergenic |
| GTGCTGCAACTTGACCAGTG+TGG | 0.740382 | 8.2:+7282270 | MS.gene051821:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATTATATAAGTAAAGT+TGG | + | chr8.2:7283834-7283853 | MS.gene051821:intron | 10.0% |
| !!! | AAATATTTTCACAAAGTAAA+CGG | - | chr8.2:7282778-7282797 | None:intergenic | 15.0% |
| !!! | ATATTTTTTATTACTATGGT+CGG | + | chr8.2:7282227-7282246 | MS.gene051821:intron | 15.0% |
| !!! | GATGATATTTTTTATTACTA+TGG | + | chr8.2:7282223-7282242 | MS.gene051821:intron | 15.0% |
| !! | AAATATGACTATAATTTAGC+TGG | - | chr8.2:7283997-7284016 | None:intergenic | 20.0% |
| !! | AAATCAAATTTCATTGGATT+TGG | + | chr8.2:7281358-7281377 | MS.gene051821:CDS | 20.0% |
| !! | AAGATATCCTATAGTTAAAT+CGG | - | chr8.2:7283046-7283065 | None:intergenic | 20.0% |
| !! | ATATACATTACTTTCTACAT+TGG | + | chr8.2:7282308-7282327 | MS.gene051821:CDS | 20.0% |
| !! | ATGTGATAATATATTAGGAT+TGG | + | chr8.2:7283218-7283237 | MS.gene051821:intron | 20.0% |
| !! | CGTTTATGTGATAATATATT+AGG | + | chr8.2:7283213-7283232 | MS.gene051821:intron | 20.0% |
| !! | TGGTAATAAGATATATAGAA+TGG | - | chr8.2:7283398-7283417 | None:intergenic | 20.0% |
| !!! | AAAGAAATTAGTTGATTTGT+TGG | + | chr8.2:7284272-7284291 | MS.gene051821:intron | 20.0% |
| !!! | ACTATATCATTTTGTTTTCA+AGG | + | chr8.2:7283361-7283380 | MS.gene051821:intron | 20.0% |
| !!! | TTGTGTGAATATATTTTAGT+TGG | + | chr8.2:7282190-7282209 | MS.gene051821:intron | 20.0% |
| ! | AAAATTGTAACATGTTGTCA+AGG | + | chr8.2:7283686-7283705 | MS.gene051821:intron | 25.0% |
| ! | AAACTTATCATTTCGTCTAT+TGG | + | chr8.2:7282913-7282932 | MS.gene051821:intron | 25.0% |
| ! | AAGTTAAGTTATTCAGCAAT+TGG | - | chr8.2:7283494-7283513 | None:intergenic | 25.0% |
| ! | AGATAAACTATCATAAGAGT+TGG | - | chr8.2:7283809-7283828 | None:intergenic | 25.0% |
| ! | AGCTGAAAATCAAATTTCAT+TGG | + | chr8.2:7281352-7281371 | MS.gene051821:CDS | 25.0% |
| ! | ATAAAAGACATATGAATGAC+AGG | - | chr8.2:7282158-7282177 | None:intergenic | 25.0% |
| ! | ATAAACTTATCACAAACAGT+TGG | - | chr8.2:7282624-7282643 | None:intergenic | 25.0% |
| ! | GAAGAATTCACTAAATGTTT+CGG | + | chr8.2:7281962-7281981 | MS.gene051821:CDS | 25.0% |
| ! | GATTATACCAATTTCTTTGT+CGG | - | chr8.2:7281054-7281073 | None:intergenic | 25.0% |
| ! | TACTTGTTTCATATAGCATT+TGG | + | chr8.2:7282026-7282045 | MS.gene051821:intron | 25.0% |
| ! | TCTATCACAAAACAACTAAA+GGG | + | chr8.2:7281017-7281036 | MS.gene051821:CDS | 25.0% |
| ! | TTATTCAGCAATTGGAATTT+AGG | - | chr8.2:7283486-7283505 | None:intergenic | 25.0% |
| ! | TTCACTTAACAACATTAAGA+AGG | + | chr8.2:7283582-7283601 | MS.gene051821:CDS | 25.0% |
| ! | TTCTATCACAAAACAACTAA+AGG | + | chr8.2:7281016-7281035 | MS.gene051821:CDS | 25.0% |
| ! | TTGTTAAGGAATCCTTTATT+TGG | + | chr8.2:7281687-7281706 | MS.gene051821:CDS | 25.0% |
| !! | AAATTGACCGATTTAACTAT+AGG | + | chr8.2:7283036-7283055 | MS.gene051821:CDS | 25.0% |
| !! | CTTAAAACTCTACAACTTTT+TGG | + | chr8.2:7281229-7281248 | MS.gene051821:CDS | 25.0% |
| !! | GAAATTCTAGCACAAATTTT+AGG | - | chr8.2:7282814-7282833 | None:intergenic | 25.0% |
| !! | GAATATTGATTAGCTATTTG+AGG | + | chr8.2:7283923-7283942 | MS.gene051821:intron | 25.0% |
| !! | GAGTATTGCTATTATATGTA+TGG | + | chr8.2:7283243-7283262 | MS.gene051821:intron | 25.0% |
| !! | GTAACAAATGTTTTTCTCAA+CGG | + | chr8.2:7284325-7284344 | MS.gene051821:CDS | 25.0% |
| !! | TAACAAATGTTTTTCTCAAC+GGG | + | chr8.2:7284326-7284345 | MS.gene051821:CDS | 25.0% |
| !! | TGTTAAGGAATCCTTTATTT+GGG | + | chr8.2:7281688-7281707 | MS.gene051821:CDS | 25.0% |
| !! | TTGCTATTATATGTATGGAT+TGG | + | chr8.2:7283248-7283267 | MS.gene051821:intron | 25.0% |
| !! | TTTAACATTTGGTTTAATCC+AGG | + | chr8.2:7284036-7284055 | MS.gene051821:intron | 25.0% |
| !!! | ATATGCTAGTCTTAATATTC+TGG | + | chr8.2:7282473-7282492 | MS.gene051821:CDS | 25.0% |
| !!! | ATTATATGTATGGATTGGTA+TGG | + | chr8.2:7283253-7283272 | MS.gene051821:intron | 25.0% |
| !!! | ATTTTGTTTTCAAGGTTTTG+AGG | + | chr8.2:7283369-7283388 | MS.gene051821:intron | 25.0% |
| !!! | GTAATTTCTAGCTTTTTAGT+AGG | + | chr8.2:7283182-7283201 | MS.gene051821:intron | 25.0% |
| !!! | TAATTTTTCTAGTTCGAGAA+TGG | - | chr8.2:7283336-7283355 | None:intergenic | 25.0% |
| !!! | TGATACTGATTCTTTTTACA+TGG | + | chr8.2:7281169-7281188 | MS.gene051821:CDS | 25.0% |
| !!! | TTTTAAGTGAGTTATTGTGA+TGG | + | chr8.2:7282858-7282877 | MS.gene051821:intron | 25.0% |
| !!! | TTTTGAGTGTCTTTAACATT+TGG | + | chr8.2:7284025-7284044 | MS.gene051821:intron | 25.0% |
| AACTTAGAGATTCAGATCAT+TGG | + | chr8.2:7284355-7284374 | MS.gene051821:CDS | 30.0% | |
| AATTTGACAGACAATGAGTT+TGG | + | chr8.2:7284133-7284152 | MS.gene051821:CDS | 30.0% | |
| ACATATGAATGACAGGAATT+TGG | - | chr8.2:7282151-7282170 | None:intergenic | 30.0% | |
| ACATGAAATTGACGATAACT+TGG | + | chr8.2:7281568-7281587 | MS.gene051821:CDS | 30.0% | |
| ACTTAGAGATTCAGATCATT+GGG | + | chr8.2:7284356-7284375 | MS.gene051821:CDS | 30.0% | |
| ATTGCCAAAAGCAAGAAAAA+AGG | + | chr8.2:7281662-7281681 | MS.gene051821:CDS | 30.0% | |
| ATTGTTCGATCTTGATCAAA+TGG | + | chr8.2:7282090-7282109 | MS.gene051821:intron | 30.0% | |
| CTCTTGATCTTATGAACTTA+TGG | + | chr8.2:7283013-7283032 | MS.gene051821:CDS | 30.0% | |
| GCTAGAATTTCTTGTTAACA+AGG | + | chr8.2:7282823-7282842 | MS.gene051821:intron | 30.0% | |
| GGAACATTTATTTGTGGAAT+AGG | + | chr8.2:7282248-7282267 | MS.gene051821:intron | 30.0% | |
| TAATGTACATACCTCTAGTA+TGG | - | chr8.2:7282002-7282021 | None:intergenic | 30.0% | |
| TCTTTGATATGCTGCAATAA+AGG | - | chr8.2:7284394-7284413 | None:intergenic | 30.0% | |
| TTATCATCATCATCAATGAG+TGG | - | chr8.2:7281272-7281291 | None:intergenic | 30.0% | |
| TTCTTGAACTACTTCTAAGT+GGG | + | chr8.2:7281894-7281913 | MS.gene051821:CDS | 30.0% | |
| TTGAATGTTACTACTATTGC+AGG | + | chr8.2:7284303-7284322 | MS.gene051821:intron | 30.0% | |
| TTGCCAAAAGCAAGAAAAAA+GGG | + | chr8.2:7281663-7281682 | MS.gene051821:CDS | 30.0% | |
| TTTCTTGAACTACTTCTAAG+TGG | + | chr8.2:7281893-7281912 | MS.gene051821:CDS | 30.0% | |
| ! | AATATTCTGGCTGATTCATT+AGG | + | chr8.2:7282486-7282505 | MS.gene051821:CDS | 30.0% |
| ! | CAATGAGTTTGGTTTAATTG+TGG | + | chr8.2:7284144-7284163 | MS.gene051821:CDS | 30.0% |
| ! | CTAAGGTCACTTAAACTTTT+CGG | + | chr8.2:7284181-7284200 | MS.gene051821:CDS | 30.0% |
| ! | TCCTTAGTCTTTCATTCTTA+AGG | + | chr8.2:7282750-7282769 | MS.gene051821:intron | 30.0% |
| !! | AACATTTGATGATGATGATG+GGG | - | chr8.2:7281087-7281106 | None:intergenic | 30.0% |
| !! | GAACATTTGATGATGATGAT+GGG | - | chr8.2:7281088-7281107 | None:intergenic | 30.0% |
| !! | GGAACATTGACTTAGATTTA+TGG | - | chr8.2:7282445-7282464 | None:intergenic | 30.0% |
| !!! | GGTTTTTTGGGTATTTTGAT+TGG | - | chr8.2:7280910-7280929 | None:intergenic | 30.0% |
| !!! | TGGTATGGATTTTTTGCATT+TGG | + | chr8.2:7283268-7283287 | MS.gene051821:intron | 30.0% |
| !!! | TTTGGGTATTTTGATTGGTT+AGG | - | chr8.2:7280905-7280924 | None:intergenic | 30.0% |
| !!! | TTTTTTGCATTTGGAATGTC+AGG | + | chr8.2:7283277-7283296 | MS.gene051821:intron | 30.0% |
| AAGACTAGCATATGTGAGAA+GGG | - | chr8.2:7282466-7282485 | None:intergenic | 35.0% | |
| AAGAGTTACATCATTGCATG+TGG | + | chr8.2:7282645-7282664 | MS.gene051821:CDS | 35.0% | |
| ACAAAACAACTAAAGGGTCA+CGG | + | chr8.2:7281023-7281042 | MS.gene051821:CDS | 35.0% | |
| ACGTGTCAATTCGTAGAAAT+CGG | + | chr8.2:7281456-7281475 | MS.gene051821:CDS | 35.0% | |
| AGAGACATTTCTTGCAAAGA+AGG | - | chr8.2:7281761-7281780 | None:intergenic | 35.0% | |
| ATGGGAGAATCAAGAGAAAA+TGG | - | chr8.2:7281110-7281129 | None:intergenic | 35.0% | |
| ATGGTCGGAACATTTATTTG+TGG | + | chr8.2:7282242-7282261 | MS.gene051821:intron | 35.0% | |
| ATTTCTACGAATTGACACGT+TGG | - | chr8.2:7281456-7281475 | None:intergenic | 35.0% | |
| CAAGAAAAAAGGGGTTGTTA+AGG | + | chr8.2:7281673-7281692 | MS.gene051821:CDS | 35.0% | |
| CACTAAATGTTTCGGAATGT+TGG | + | chr8.2:7281970-7281989 | MS.gene051821:CDS | 35.0% | |
| GAATGAAGATGATCATCATG+CGG | + | chr8.2:7281541-7281560 | MS.gene051821:CDS | 35.0% | |
| GATCTGGTTGAAACTTAGAT+TGG | + | chr8.2:7283733-7283752 | MS.gene051821:intron | 35.0% | |
| GCCTTAAGAATGAAAGACTA+AGG | - | chr8.2:7282754-7282773 | None:intergenic | 35.0% | |
| GTCAGGAATATTTCTTCATG+TGG | + | chr8.2:7283294-7283313 | MS.gene051821:intron | 35.0% | |
| GTTAAGTGAAAGTTCTTCCA+AGG | - | chr8.2:7283572-7283591 | None:intergenic | 35.0% | |
| TAAGACTAGCATATGTGAGA+AGG | - | chr8.2:7282467-7282486 | None:intergenic | 35.0% | |
| TCAATTCCTCTCTTGAGAAA+GGG | - | chr8.2:7281140-7281159 | None:intergenic | 35.0% | |
| TCTTTAAGCCGAATATGAGT+AGG | - | chr8.2:7281923-7281942 | None:intergenic | 35.0% | |
| TGCATGTGGTCAGAATATTA+AGG | + | chr8.2:7282659-7282678 | MS.gene051821:CDS | 35.0% | |
| TGCATTGTTTGCAAGTGATA+AGG | - | chr8.2:7284077-7284096 | None:intergenic | 35.0% | |
| TGCCAAAAGCAAGAAAAAAG+GGG | + | chr8.2:7281664-7281683 | MS.gene051821:CDS | 35.0% | |
| TGCTTATGAAAGGATTGATC+TGG | + | chr8.2:7283717-7283736 | MS.gene051821:intron | 35.0% | |
| TTCAATTCCTCTCTTGAGAA+AGG | - | chr8.2:7281141-7281160 | None:intergenic | 35.0% | |
| ! | AAATCTTCTCCGTTCCTTTT+CGG | - | chr8.2:7281716-7281735 | None:intergenic | 35.0% |
| ! | AAGAACAAGGTTGTTGTTGT+TGG | - | chr8.2:7280956-7280975 | None:intergenic | 35.0% |
| ! | ACATTTGGTTTAATCCAGGT+TGG | + | chr8.2:7284040-7284059 | MS.gene051821:intron | 35.0% |
| ! | ACTGAAACTAATGATAGCGA+TGG | + | chr8.2:7281410-7281429 | MS.gene051821:CDS | 35.0% |
| ! | AGAACAAGGTTGTTGTTGTT+GGG | - | chr8.2:7280955-7280974 | None:intergenic | 35.0% |
| ! | GGTTTTTCCGACAAAGAAAT+TGG | + | chr8.2:7281044-7281063 | MS.gene051821:CDS | 35.0% |
| ! | TAAACTTTTCGGATGTTCAC+AGG | + | chr8.2:7284192-7284211 | MS.gene051821:CDS | 35.0% |
| ! | TACAACTTTTTGGACCCAAA+AGG | + | chr8.2:7281239-7281258 | MS.gene051821:CDS | 35.0% |
| !! | GGAACATTTGATGATGATGA+TGG | - | chr8.2:7281089-7281108 | None:intergenic | 35.0% |
| !! | GTGATTTGTTCTACTGTTTG+TGG | + | chr8.2:7283873-7283892 | MS.gene051821:intron | 35.0% |
| !! | TTAGAAGTGTTATCACTAGC+TGG | + | chr8.2:7282594-7282613 | MS.gene051821:CDS | 35.0% |
| !!! | AACCCCTTTTTTCTTGCTTT+TGG | - | chr8.2:7281669-7281688 | None:intergenic | 35.0% |
| !!! | ATTGGGAATGAGGGTTTTTT+GGG | - | chr8.2:7280922-7280941 | None:intergenic | 35.0% |
| !!! | TGAAGCAATTGCTGCTTTTT+TGG | + | chr8.2:7283531-7283550 | MS.gene051821:CDS | 35.0% |
| AAAACAAGAGACCACCTGAA+TGG | - | chr8.2:7283114-7283133 | None:intergenic | 40.0% | |
| AAAGAGCCTAATCCTAACCA+AGG | + | chr8.2:7284409-7284428 | MS.gene051821:CDS | 40.0% | |
| AAGTTCTTCCAAGGATTTGC+CGG | - | chr8.2:7283563-7283582 | None:intergenic | 40.0% | |
| AGGAACAGAACAATTGGAAG+AGG | - | chr8.2:7280979-7280998 | None:intergenic | 40.0% | |
| AGGTTAATGTTTCCGCTATC+TGG | + | chr8.2:7283943-7283962 | MS.gene051821:intron | 40.0% | |
| ATAGAATCAACATCGCTGAG+TGG | - | chr8.2:7281002-7281021 | None:intergenic | 40.0% | |
| ATCAATCTAGACAAGCAGCT+TGG | - | chr8.2:7282342-7282361 | None:intergenic | 40.0% | |
| ATTCTTGCTAACCATGCTGA+TGG | + | chr8.2:7281785-7281804 | MS.gene051821:CDS | 40.0% | |
| CAAGTGATAAGGTTGTCTGT+TGG | - | chr8.2:7284066-7284085 | None:intergenic | 40.0% | |
| CAATTCGTAGAAATCGGTAC+AGG | + | chr8.2:7281462-7281481 | MS.gene051821:CDS | 40.0% | |
| CAATTGGAAGAGGAAGAACA+AGG | - | chr8.2:7280969-7280988 | None:intergenic | 40.0% | |
| CTCGATCTGCAGAAATTTGA+CGG | + | chr8.2:7282945-7282964 | MS.gene051821:intron | 40.0% | |
| CTTGCCAAATGTCTCTCAAT+TGG | + | chr8.2:7283623-7283642 | MS.gene051821:intron | 40.0% | |
| GAAAAGGAACGGAGAAGATT+TGG | + | chr8.2:7281715-7281734 | MS.gene051821:CDS | 40.0% | |
| GAAGAAGATTCATGGGGTAA+TGG | - | chr8.2:7281197-7281216 | None:intergenic | 40.0% | |
| GAAGAGGAAGAAGATTCATG+GGG | - | chr8.2:7281203-7281222 | None:intergenic | 40.0% | |
| GATGGAATGGTTTCACTTGA+TGG | + | chr8.2:7281803-7281822 | MS.gene051821:CDS | 40.0% | |
| GCTAACTGAAAACCAGATAG+CGG | - | chr8.2:7283958-7283977 | None:intergenic | 40.0% | |
| GCTTTGATTGCTTCAGAGAA+AGG | - | chr8.2:7281629-7281648 | None:intergenic | 40.0% | |
| GGAAGAGGAAGAAGATTCAT+GGG | - | chr8.2:7281204-7281223 | None:intergenic | 40.0% | |
| GGACAGATCATGATTACATG+CGG | - | chr8.2:7283465-7283484 | None:intergenic | 40.0% | |
| GTGGGTTTCCTACTCATATT+CGG | + | chr8.2:7281912-7281931 | MS.gene051821:CDS | 40.0% | |
| TGATGAAGATGATCAGAGGA+AGG | + | chr8.2:7281325-7281344 | MS.gene051821:CDS | 40.0% | |
| TGATGCTGCACTAATCTTGT+CGG | + | chr8.2:7282551-7282570 | MS.gene051821:CDS | 40.0% | |
| TGCATACCTTAGATCTGTCA+TGG | + | chr8.2:7284104-7284123 | MS.gene051821:CDS | 40.0% | |
| TGGAAGAGGAAGAAGATTCA+TGG | - | chr8.2:7281205-7281224 | None:intergenic | 40.0% | |
| TGTTGGGTGGAATTTGGATT+GGG | - | chr8.2:7280939-7280958 | None:intergenic | 40.0% | |
| TTGAGAAAGGGCTCATGAAT+GGG | - | chr8.2:7281128-7281147 | None:intergenic | 40.0% | |
| TTGTTGGGTGGAATTTGGAT+TGG | - | chr8.2:7280940-7280959 | None:intergenic | 40.0% | |
| TTTCGGATGAGCTCAAACAA+AGG | + | chr8.2:7281828-7281847 | MS.gene051821:CDS | 40.0% | |
| TTTGGTGAAGGGAAGGTTTA+GGG | + | chr8.2:7281733-7281752 | MS.gene051821:CDS | 40.0% | |
| ! | ATCACTGTCACTGATAACGA+TGG | - | chr8.2:7281306-7281325 | None:intergenic | 40.0% |
| ! | ATGAGTGGTTTCTTGCCTTT+TGG | - | chr8.2:7281257-7281276 | None:intergenic | 40.0% |
| ! | ATTGCTTCAGAGAAAGGTGT+TGG | - | chr8.2:7281623-7281642 | None:intergenic | 40.0% |
| ! | ATTTGGGTTCCGAAAAGGAA+CGG | + | chr8.2:7281704-7281723 | MS.gene051821:CDS | 40.0% |
| ! | ATTTGGTGAAGGGAAGGTTT+AGG | + | chr8.2:7281732-7281751 | MS.gene051821:CDS | 40.0% |
| ! | CCTTTATTTGGGTTCCGAAA+AGG | + | chr8.2:7281699-7281718 | MS.gene051821:CDS | 40.0% |
| ! | CCTTTTCGGAACCCAAATAA+AGG | - | chr8.2:7281702-7281721 | None:intergenic | 40.0% |
| ! | GGAATTTGGATTGGGAATGA+GGG | - | chr8.2:7280931-7280950 | None:intergenic | 40.0% |
| ! | GTGATGATGAAGATGATCAG+AGG | + | chr8.2:7281321-7281340 | MS.gene051821:CDS | 40.0% |
| ! | TGAGTGGTTTCTTGCCTTTT+GGG | - | chr8.2:7281256-7281275 | None:intergenic | 40.0% |
| ! | TGGAATTTGGATTGGGAATG+AGG | - | chr8.2:7280932-7280951 | None:intergenic | 40.0% |
| ! | TGTTGTTGTTGGGTGGAATT+TGG | - | chr8.2:7280945-7280964 | None:intergenic | 40.0% |
| !! | AACGGAGAAGATTTGGTGAA+GGG | + | chr8.2:7281722-7281741 | MS.gene051821:CDS | 40.0% |
| !! | CATGAAGTTGATGCTGATGA+TGG | + | chr8.2:7281593-7281612 | MS.gene051821:CDS | 40.0% |
| !! | GGTTTCACTTGATGGTGTTT+CGG | + | chr8.2:7281811-7281830 | MS.gene051821:CDS | 40.0% |
| !! | TTGATTAGTCTATCCCTCAC+TGG | + | chr8.2:7282357-7282376 | MS.gene051821:CDS | 40.0% |
| !!! | GATTGGGAATGAGGGTTTTT+TGG | - | chr8.2:7280923-7280942 | None:intergenic | 40.0% |
| !!! | GTTGTAGAGTTTTAAGCGCT+TGG | - | chr8.2:7281225-7281244 | None:intergenic | 40.0% |
| CAAACAAAGGCTTAGCGCAT+TGG | + | chr8.2:7281841-7281860 | MS.gene051821:CDS | 45.0% | |
| CGAGCCAATTGAGAGACATT+TGG | - | chr8.2:7283630-7283649 | None:intergenic | 45.0% | |
| CTGTTATAACTCGTCCACAC+TGG | - | chr8.2:7282287-7282306 | None:intergenic | 45.0% | |
| CTTGAGAAAGGGCTCATGAA+TGG | - | chr8.2:7281129-7281148 | None:intergenic | 45.0% | |
| CTTGCCGTCTTACTGATAAG+GGG | + | chr8.2:7282382-7282401 | MS.gene051821:CDS | 45.0% | |
| GAATTCTTCCTCTGTCAACC+AGG | - | chr8.2:7281951-7281970 | None:intergenic | 45.0% | |
| GACACAATGCAGACGATACT+TGG | - | chr8.2:7283418-7283437 | None:intergenic | 45.0% | |
| GAGTGGAGGAACAGAACAAT+TGG | - | chr8.2:7280985-7281004 | None:intergenic | 45.0% | |
| GCAACCCCTTATCAGTAAGA+CGG | - | chr8.2:7282389-7282408 | None:intergenic | 45.0% | |
| GCTTGCCGTCTTACTGATAA+GGG | + | chr8.2:7282381-7282400 | MS.gene051821:CDS | 45.0% | |
| GGCTTCTCTGTGCTTATGAA+AGG | + | chr8.2:7283707-7283726 | MS.gene051821:intron | 45.0% | |
| GTGAAACCATTCCATCAGCA+TGG | - | chr8.2:7281799-7281818 | None:intergenic | 45.0% | |
| GTTGGACACTTCCATACTAG+AGG | + | chr8.2:7281988-7282007 | MS.gene051821:CDS | 45.0% | |
| TCGACACCATGACAGATCTA+AGG | - | chr8.2:7284113-7284132 | None:intergenic | 45.0% | |
| TGAAGATGATCATCATGCGG+CGG | + | chr8.2:7281544-7281563 | MS.gene051821:CDS | 45.0% | |
| TGCTAACCATGCTGATGGAA+TGG | + | chr8.2:7281790-7281809 | MS.gene051821:CDS | 45.0% | |
| TGCTTGCCGTCTTACTGATA+AGG | + | chr8.2:7282380-7282399 | MS.gene051821:CDS | 45.0% | |
| TGGATAGCTGTTTGTCGCTA+AGG | + | chr8.2:7284164-7284183 | MS.gene051821:CDS | 45.0% | |
| TTCGGCTTAAAGATTGCTCC+TGG | + | chr8.2:7281930-7281949 | MS.gene051821:CDS | 45.0% | |
| ! | ACAAGGTTGTTGTTGTTGGG+TGG | - | chr8.2:7280952-7280971 | None:intergenic | 45.0% |
| !! | GAACGGAGAAGATTTGGTGA+AGG | + | chr8.2:7281721-7281740 | MS.gene051821:CDS | 45.0% |
| !! | GAGAAGATTTGGTGAAGGGA+AGG | + | chr8.2:7281726-7281745 | MS.gene051821:CDS | 45.0% |
| !!! | GAGTTTTAAGCGCTTGGAAG+AGG | - | chr8.2:7281219-7281238 | None:intergenic | 45.0% |
| !!! | GCTGCTTTTTTGGAGATGAC+CGG | + | chr8.2:7283541-7283560 | MS.gene051821:CDS | 45.0% |
| AAGATCAAGAGCCTGCAGTC+CGG | - | chr8.2:7283004-7283023 | None:intergenic | 50.0% | |
| AGATTGCTCCTGGTTGACAG+AGG | + | chr8.2:7281940-7281959 | MS.gene051821:CDS | 50.0% | |
| CATGAGCCCTTTCTCAAGAG+AGG | + | chr8.2:7281131-7281150 | MS.gene051821:CDS | 50.0% | |
| GAATCAACATCGCTGAGTGG+AGG | - | chr8.2:7280999-7281018 | None:intergenic | 50.0% | |
| GTCATTGCTACACACTGTCC+CGG | + | chr8.2:7282982-7283001 | MS.gene051821:CDS | 50.0% | |
| GTGCGTACAGTCAGCTACAT+CGG | - | chr8.2:7282119-7282138 | None:intergenic | 50.0% | |
| TGATAAGGGGTTGCAGCTAC+TGG | + | chr8.2:7282395-7282414 | MS.gene051821:CDS | 50.0% | |
| ! | AGAGCGCCTTGGTTAGGATT+AGG | - | chr8.2:7284418-7284437 | None:intergenic | 50.0% |
| ! | ATGAATAACGCAGAGCGCCT+TGG | - | chr8.2:7284429-7284448 | None:intergenic | 50.0% |
| !! | GAGACCACCTGAATGGATTG+CGG | - | chr8.2:7283107-7283126 | None:intergenic | 50.0% |
| AAGACGGCAAGCACCAGTGA+GGG | - | chr8.2:7282373-7282392 | None:intergenic | 55.0% | |
| ACCTCTGCCGCAATCCATTC+AGG | + | chr8.2:7283097-7283116 | MS.gene051821:CDS | 55.0% | |
| AGATCAAGAGCCTGCAGTCC+GGG | - | chr8.2:7283003-7283022 | None:intergenic | 55.0% | |
| AGGTTGTCTGTTGGCCAACC+TGG | - | chr8.2:7284057-7284076 | None:intergenic | 55.0% | |
| CGTACAGTCAGCTACATCGG+TGG | - | chr8.2:7282116-7282135 | None:intergenic | 55.0% | |
| GGAGATGACCGGCAAATCCT+TGG | + | chr8.2:7283552-7283571 | MS.gene051821:CDS | 55.0% | |
| GTGCTGCAACTTGACCAGTG+TGG | + | chr8.2:7282270-7282289 | MS.gene051821:CDS | 55.0% | |
| TAAGACGGCAAGCACCAGTG+AGG | - | chr8.2:7282374-7282393 | None:intergenic | 55.0% | |
| TCTGCCGCAATCCATTCAGG+TGG | + | chr8.2:7283100-7283119 | MS.gene051821:intron | 55.0% | |
| ! | TAACGCAGAGCGCCTTGGTT+AGG | - | chr8.2:7284424-7284443 | None:intergenic | 55.0% |
| !! | ACCTGAATGGATTGCGGCAG+AGG | - | chr8.2:7283101-7283120 | None:intergenic | 55.0% |
| TACACACTGTCCCGGACTGC+AGG | + | chr8.2:7282990-7283009 | MS.gene051821:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 7280897 | 7284450 | 7280897 | ID=MS.gene051821 |
| chr8.2 | mRNA | 7280897 | 7284450 | 7280897 | ID=MS.gene051821.t1;Parent=MS.gene051821 |
| chr8.2 | exon | 7280897 | 7282009 | 7280897 | ID=MS.gene051821.t1.exon1;Parent=MS.gene051821.t1 |
| chr8.2 | CDS | 7280897 | 7282009 | 7280897 | ID=cds.MS.gene051821.t1;Parent=MS.gene051821.t1 |
| chr8.2 | exon | 7282270 | 7282703 | 7282270 | ID=MS.gene051821.t1.exon2;Parent=MS.gene051821.t1 |
| chr8.2 | CDS | 7282270 | 7282703 | 7282270 | ID=cds.MS.gene051821.t1;Parent=MS.gene051821.t1 |
| chr8.2 | exon | 7282957 | 7283118 | 7282957 | ID=MS.gene051821.t1.exon3;Parent=MS.gene051821.t1 |
| chr8.2 | CDS | 7282957 | 7283118 | 7282957 | ID=cds.MS.gene051821.t1;Parent=MS.gene051821.t1 |
| chr8.2 | exon | 7283528 | 7283603 | 7283528 | ID=MS.gene051821.t1.exon4;Parent=MS.gene051821.t1 |
| chr8.2 | CDS | 7283528 | 7283603 | 7283528 | ID=cds.MS.gene051821.t1;Parent=MS.gene051821.t1 |
| chr8.2 | exon | 7284058 | 7284213 | 7284058 | ID=MS.gene051821.t1.exon5;Parent=MS.gene051821.t1 |
| chr8.2 | CDS | 7284058 | 7284213 | 7284058 | ID=cds.MS.gene051821.t1;Parent=MS.gene051821.t1 |
| chr8.2 | exon | 7284325 | 7284450 | 7284325 | ID=MS.gene051821.t1.exon6;Parent=MS.gene051821.t1 |
| chr8.2 | CDS | 7284325 | 7284450 | 7284325 | ID=cds.MS.gene051821.t1;Parent=MS.gene051821.t1 |
| Gene Sequence |
| Protein sequence |
