Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24948.t1 | XP_024637533.1 | 97.4 | 540 | 11 | 1 | 1 | 537 | 1 | 540 | 9.90E-293 | 1015.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24948.t1 | Q9CA89 | 63.9 | 552 | 147 | 12 | 1 | 537 | 1 | 515 | 1.3e-176 | 620.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24948.t1 | A0A396I1E5 | 97.4 | 540 | 11 | 1 | 1 | 537 | 1 | 540 | 7.1e-293 | 1015.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene61338 | MS.gene24948 | PPI |
| MS.gene043004 | MS.gene24948 | PPI |
| MS.gene24948 | MS.gene059632 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24948.t1 | MTR_2g101830 | 75.229 | 545 | 115 | 7 | 1 | 537 | 1 | 533 | 0.0 | 815 |
| MS.gene24948.t1 | MTR_4g013165 | 97.750 | 400 | 6 | 1 | 141 | 537 | 1 | 400 | 0.0 | 809 |
| MS.gene24948.t1 | MTR_6g087700 | 57.194 | 563 | 201 | 14 | 1 | 537 | 1 | 549 | 0.0 | 585 |
| MS.gene24948.t1 | MTR_7g065220 | 50.704 | 426 | 178 | 6 | 75 | 469 | 167 | 591 | 4.76e-145 | 432 |
| MS.gene24948.t1 | MTR_4g075640 | 56.164 | 365 | 138 | 6 | 88 | 431 | 85 | 448 | 2.92e-140 | 417 |
| MS.gene24948.t1 | MTR_4g019770 | 52.732 | 366 | 153 | 4 | 90 | 436 | 96 | 460 | 1.49e-134 | 401 |
| MS.gene24948.t1 | MTR_3g069590 | 49.869 | 383 | 161 | 6 | 88 | 440 | 98 | 479 | 1.35e-132 | 398 |
| MS.gene24948.t1 | MTR_5g081410 | 51.359 | 368 | 155 | 5 | 92 | 436 | 84 | 450 | 3.68e-129 | 389 |
| MS.gene24948.t1 | MTR_8g030850 | 48.942 | 378 | 164 | 5 | 87 | 436 | 94 | 470 | 6.21e-126 | 377 |
| MS.gene24948.t1 | MTR_3g069590 | 50.448 | 335 | 142 | 5 | 88 | 399 | 98 | 431 | 1.81e-116 | 351 |
| MS.gene24948.t1 | MTR_7g077690 | 44.258 | 418 | 161 | 6 | 90 | 436 | 113 | 529 | 2.84e-114 | 349 |
| MS.gene24948.t1 | MTR_5g025960 | 45.352 | 355 | 180 | 5 | 90 | 431 | 118 | 471 | 8.78e-103 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24948.t1 | AT1G79860 | 65.328 | 548 | 146 | 14 | 1 | 537 | 1 | 515 | 0.0 | 661 |
| MS.gene24948.t1 | AT1G52240 | 60.469 | 554 | 190 | 9 | 1 | 537 | 1 | 542 | 0.0 | 622 |
| MS.gene24948.t1 | AT3G24620 | 56.216 | 555 | 193 | 12 | 1 | 537 | 1 | 523 | 0.0 | 573 |
| MS.gene24948.t1 | AT4G13240 | 54.851 | 536 | 194 | 8 | 17 | 537 | 15 | 517 | 0.0 | 565 |
| MS.gene24948.t1 | AT3G16130 | 50.543 | 552 | 238 | 9 | 1 | 535 | 1 | 534 | 2.65e-176 | 508 |
| MS.gene24948.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 34 | 493 | 5.53e-174 | 500 |
| MS.gene24948.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 34 | 493 | 5.53e-174 | 500 |
| MS.gene24948.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 53 | 512 | 1.37e-173 | 500 |
| MS.gene24948.t1 | AT5G19560 | 55.309 | 405 | 148 | 7 | 1 | 399 | 1 | 378 | 3.22e-146 | 425 |
| MS.gene24948.t1 | AT5G02010 | 52.033 | 369 | 156 | 5 | 88 | 436 | 68 | 435 | 4.08e-138 | 411 |
| MS.gene24948.t1 | AT4G38430 | 53.552 | 366 | 147 | 6 | 88 | 431 | 88 | 452 | 2.21e-134 | 401 |
| MS.gene24948.t1 | AT5G19560 | 54.645 | 366 | 150 | 5 | 181 | 537 | 5 | 363 | 6.17e-128 | 378 |
| MS.gene24948.t1 | AT5G05940 | 49.868 | 379 | 164 | 5 | 82 | 435 | 94 | 471 | 6.81e-128 | 387 |
| MS.gene24948.t1 | AT3G55660 | 50.693 | 361 | 155 | 5 | 90 | 428 | 107 | 466 | 1.65e-125 | 379 |
| MS.gene24948.t1 | AT4G00460 | 50.137 | 365 | 157 | 6 | 90 | 431 | 104 | 466 | 4.50e-125 | 375 |
| MS.gene24948.t1 | AT4G00460 | 50.137 | 365 | 157 | 6 | 90 | 431 | 104 | 466 | 4.50e-125 | 375 |
| MS.gene24948.t1 | AT1G01700 | 48.352 | 364 | 165 | 4 | 90 | 431 | 116 | 478 | 6.00e-120 | 362 |
| MS.gene24948.t1 | AT2G45890 | 47.185 | 373 | 166 | 6 | 90 | 436 | 93 | 460 | 1.95e-118 | 357 |
| MS.gene24948.t1 | AT1G01700 | 44.670 | 394 | 165 | 5 | 90 | 431 | 116 | 508 | 1.48e-113 | 347 |
| MS.gene24948.t1 | AT5G05940 | 48.077 | 364 | 163 | 5 | 61 | 399 | 73 | 435 | 4.59e-113 | 345 |
| MS.gene24948.t1 | AT3G55660 | 49.699 | 332 | 144 | 5 | 90 | 399 | 107 | 437 | 1.05e-111 | 339 |
| MS.gene24948.t1 | AT4G00460 | 47.130 | 331 | 150 | 6 | 124 | 431 | 5 | 333 | 1.64e-103 | 315 |
| MS.gene24948.t1 | AT1G01700 | 45.748 | 341 | 155 | 5 | 90 | 401 | 116 | 455 | 1.28e-100 | 311 |
| MS.gene24948.t1 | AT1G31650 | 41.688 | 391 | 199 | 8 | 90 | 464 | 108 | 485 | 5.94e-99 | 310 |
| MS.gene24948.t1 | AT1G31650 | 41.688 | 391 | 199 | 8 | 90 | 464 | 136 | 513 | 1.37e-98 | 310 |
| MS.gene24948.t1 | AT4G00460 | 52.074 | 217 | 89 | 3 | 90 | 292 | 104 | 319 | 1.38e-73 | 237 |
| MS.gene24948.t1 | AT1G01700 | 49.309 | 217 | 95 | 2 | 90 | 292 | 116 | 331 | 1.20e-69 | 228 |
| MS.gene24948.t1 | AT1G01700 | 49.309 | 217 | 95 | 2 | 90 | 292 | 116 | 331 | 1.20e-69 | 228 |
Find 109 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATCTTGCTTTCCTTTC+CGG | 0.078322 | 4.1:+82943921 | None:intergenic |
| TAGCTTCTCTTTGGCTTCTT+TGG | 0.168978 | 4.1:+82944611 | None:intergenic |
| ACCCTTTCAGAATCATTTAA+AGG | 0.183778 | 4.1:+82944675 | None:intergenic |
| TTCAAGAATATTGGAAAGTT+TGG | 0.229165 | 4.1:-82942168 | MS.gene24948:CDS |
| TGAAAGCTATTCAAGAATAT+TGG | 0.237962 | 4.1:-82942177 | MS.gene24948:CDS |
| TCCTCTGAAATTGAATAGTT+TGG | 0.241404 | 4.1:+82944809 | None:intergenic |
| AAACCTTCTGCAGGTACTTT+AGG | 0.242838 | 4.1:+82943231 | None:intergenic |
| CACTTGTCTGGCTTTGGAAC+TGG | 0.249997 | 4.1:+82942053 | None:intergenic |
| GTCACTATGGGTTGAAGTTT+TGG | 0.251808 | 4.1:+82941867 | None:intergenic |
| CGCTTTCTTATCAGTCACTA+TGG | 0.271679 | 4.1:+82941854 | None:intergenic |
| GAGATTTGCTAAACTACTAT+TGG | 0.292387 | 4.1:-82944211 | MS.gene24948:CDS |
| CTCTTGAAACATCGGTTTCC+CGG | 0.303473 | 4.1:-82942469 | MS.gene24948:CDS |
| TTTCGCTGTTTCAGATGATT+TGG | 0.310878 | 4.1:-82941916 | MS.gene24948:CDS |
| AGGGATTCAATATAGCTTTC+AGG | 0.311443 | 4.1:+82943102 | None:intergenic |
| CTTGGAGTTGGACACTTGTC+TGG | 0.318966 | 4.1:+82942041 | None:intergenic |
| AGCAGAACCCCATGCTGATT+TGG | 0.319621 | 4.1:+82942546 | None:intergenic |
| GTTGGACACTTGTCTGGCTT+TGG | 0.325094 | 4.1:+82942047 | None:intergenic |
| CGGACTTCCACAATCTTCAT+TGG | 0.333257 | 4.1:-82942449 | MS.gene24948:CDS |
| AGAAATTGATTGGCTTCTTT+CGG | 0.336102 | 4.1:-82943895 | MS.gene24948:CDS |
| ATATTCTTACCCGGTTGAAT+TGG | 0.342935 | 4.1:+82942413 | None:intergenic |
| ACCTTGTAATAGCTTCTCTT+TGG | 0.346571 | 4.1:+82944602 | None:intergenic |
| AGATTTGCTAAACTACTATT+GGG | 0.358169 | 4.1:-82944210 | MS.gene24948:CDS |
| CTGCTTCTTCTTCCTTGAGT+TGG | 0.362852 | 4.1:+82942086 | None:intergenic |
| GATGACACTATCGGATTTCA+TGG | 0.363592 | 4.1:-82941982 | MS.gene24948:CDS |
| GATGGAGAAAAGAAATTGAT+TGG | 0.363929 | 4.1:-82943905 | MS.gene24948:CDS |
| CACCGATTACGTTGTTGAAA+TGG | 0.368043 | 4.1:-82943871 | MS.gene24948:CDS |
| TTGAGGCATCAATAGTGATT+TGG | 0.369420 | 4.1:-82942594 | MS.gene24948:CDS |
| AAAAGGTGTTTCTTCAGCTT+TGG | 0.377971 | 4.1:-82944166 | MS.gene24948:CDS |
| AACCATTTCAACAACGTAAT+CGG | 0.380996 | 4.1:+82943869 | None:intergenic |
| TTTCCGGTGGCATTGGCTCT+AGG | 0.384702 | 4.1:+82943937 | None:intergenic |
| AAGCTGAATCGTTCATTAGA+AGG | 0.387113 | 4.1:-82941944 | MS.gene24948:CDS |
| AAAATTCATCGGTAATATTC+CGG | 0.391302 | 4.1:+82942689 | None:intergenic |
| TCCTTGGATTTCTGCTGTGT+TGG | 0.392723 | 4.1:+82943846 | None:intergenic |
| ATGGGGTTCTGCTGTGAGTT+TGG | 0.395399 | 4.1:-82942536 | MS.gene24948:CDS |
| CTCCATGGTTGAACCATCCT+TGG | 0.395990 | 4.1:+82943830 | None:intergenic |
| TAAGCAAAATCCAATTCAAC+CGG | 0.402717 | 4.1:-82942423 | MS.gene24948:CDS |
| GCTTTCCTTTCCGGTGGCAT+TGG | 0.405690 | 4.1:+82943930 | None:intergenic |
| TGCACAAACTCTATCAGAAA+TGG | 0.412815 | 4.1:-82943130 | MS.gene24948:CDS |
| GCGTCCTACGTTGAAAATAT+AGG | 0.413983 | 4.1:-82941834 | MS.gene24948:CDS |
| TATTTATTATGGCAGGATGT+AGG | 0.423799 | 4.1:-82942212 | MS.gene24948:intron |
| AGAGGAATGTTTGAGAATAC+AGG | 0.429946 | 4.1:-82944792 | MS.gene24948:CDS |
| CAATGAAGATTGTGGAAGTC+CGG | 0.433059 | 4.1:+82942450 | None:intergenic |
| ATTTATTATGGCAGGATGTA+GGG | 0.436823 | 4.1:-82942211 | MS.gene24948:intron |
| AATGCATTAACAAATCTTGC+TGG | 0.438177 | 4.1:-82944135 | MS.gene24948:intron |
| GTCTAGGAGACATAATTTAC+CGG | 0.445651 | 4.1:-82942708 | MS.gene24948:CDS |
| TCACTTCTGTCTACATCTCT+TGG | 0.450269 | 4.1:+82942023 | None:intergenic |
| GTATCAAGCTTTCTCAAGGC+AGG | 0.451607 | 4.1:+82943674 | None:intergenic |
| GATATGTCTGGTGGAGGAAA+AGG | 0.452382 | 4.1:-82944183 | MS.gene24948:CDS |
| TTCGATCCCGATCAGTTCCT+AGG | 0.458208 | 4.1:-82942667 | MS.gene24948:CDS |
| CCTTGACTTCTTGATGAAGC+AGG | 0.459530 | 4.1:+82944705 | None:intergenic |
| ACCTTTAAATGATTCTGAAA+GGG | 0.465239 | 4.1:-82944676 | MS.gene24948:CDS |
| TTCAGAAATGGAACAGATGA+AGG | 0.477101 | 4.1:-82944235 | MS.gene24948:intron |
| AACCTTTAAATGATTCTGAA+AGG | 0.479697 | 4.1:-82944677 | MS.gene24948:CDS |
| CACTATCGGATTTCATGGGT+TGG | 0.504092 | 4.1:-82941977 | MS.gene24948:CDS |
| ATGTTTCAAGAGAAGTAAGA+TGG | 0.504617 | 4.1:+82942480 | None:intergenic |
| CTTATATCCAATGAAGATTG+TGG | 0.506045 | 4.1:+82942442 | None:intergenic |
| CTGTCTACATCTCTTGGAGT+TGG | 0.509157 | 4.1:+82942029 | None:intergenic |
| AATAATCAATGGCGTGATGT+TGG | 0.515072 | 4.1:+82941798 | None:intergenic |
| AGGCATCAATAGTGATTTGG+AGG | 0.517145 | 4.1:-82942591 | MS.gene24948:CDS |
| TGACAAATCAAGAACAATCA+AGG | 0.524014 | 4.1:-82944646 | MS.gene24948:CDS |
| TACTCTTGATAGCACTGTAA+AGG | 0.525700 | 4.1:+82942145 | None:intergenic |
| GCAGGATCATCTTCAGAAGT+AGG | 0.529193 | 4.1:+82944723 | None:intergenic |
| AATGAAGATTGTGGAAGTCC+GGG | 0.535167 | 4.1:+82942451 | None:intergenic |
| GCTTTCTTATCAGTCACTAT+GGG | 0.535643 | 4.1:+82941855 | None:intergenic |
| AAAGATGCTGATGATCCAAA+AGG | 0.536136 | 4.1:-82943285 | MS.gene24948:CDS |
| AAAAGATTCCAAATCAGCAT+GGG | 0.538216 | 4.1:-82942554 | MS.gene24948:CDS |
| GCGCCTAGAGCCAATGCCAC+CGG | 0.540190 | 4.1:-82943940 | MS.gene24948:CDS |
| TCGATCCCGATCAGTTCCTA+GGG | 0.545956 | 4.1:-82942666 | MS.gene24948:CDS |
| TTTGTGTTTGGGAATCTGCA+TGG | 0.548213 | 4.1:+82942111 | None:intergenic |
| AGCTGAATCGTTCATTAGAA+GGG | 0.550005 | 4.1:-82941943 | MS.gene24948:CDS |
| TGATCTCAAGAATAGAATTG+AGG | 0.555196 | 4.1:-82942611 | MS.gene24948:CDS |
| ATTGTCCCTAGGAACTGATC+GGG | 0.557717 | 4.1:+82942661 | None:intergenic |
| TCCAAACTATTCAATTTCAG+AGG | 0.558140 | 4.1:-82944810 | MS.gene24948:CDS |
| ATGACACTATCGGATTTCAT+GGG | 0.566800 | 4.1:-82941981 | MS.gene24948:CDS |
| TCAAGTACTTAAAGCAGCAA+TGG | 0.567209 | 4.1:-82943160 | MS.gene24948:CDS |
| GGGGAAGATATGTCTGGTGG+AGG | 0.568650 | 4.1:-82944189 | MS.gene24948:CDS |
| TATTGTCCCTAGGAACTGAT+CGG | 0.570239 | 4.1:+82942660 | None:intergenic |
| ATGACATGTCTATTGTCCCT+AGG | 0.570387 | 4.1:+82942650 | None:intergenic |
| CATCTTGCTTTCCTTTCCGG+TGG | 0.571860 | 4.1:+82943924 | None:intergenic |
| CACCGGAAAGGAAAGCAAGA+TGG | 0.574325 | 4.1:-82943923 | MS.gene24948:CDS |
| GCCAAAGAGAAGCTATTACA+AGG | 0.575015 | 4.1:-82944603 | MS.gene24948:intron |
| TCTTACTTCTCTTGAAACAT+CGG | 0.576704 | 4.1:-82942477 | MS.gene24948:CDS |
| GCTTCAGATAAACCTTCTGC+AGG | 0.580248 | 4.1:+82943222 | None:intergenic |
| CAGAATGGAAGAGCAAGTCT+AGG | 0.580694 | 4.1:-82942724 | MS.gene24948:CDS |
| CATTGTATCAAGCTTTCTCA+AGG | 0.582888 | 4.1:+82943670 | None:intergenic |
| CTATATTGAATCCCTACCTA+AGG | 0.582995 | 4.1:-82943094 | MS.gene24948:intron |
| CCTGCTTCATCAAGAAGTCA+AGG | 0.585571 | 4.1:-82944705 | MS.gene24948:CDS |
| GATTTGCTAAACTACTATTG+GGG | 0.587710 | 4.1:-82944209 | MS.gene24948:CDS |
| TATCAAGCTTTCTCAAGGCA+GGG | 0.597091 | 4.1:+82943675 | None:intergenic |
| TAGAGCCAATGCCACCGGAA+AGG | 0.597760 | 4.1:-82943935 | MS.gene24948:CDS |
| CAAACACAAAATCCAACTCA+AGG | 0.607976 | 4.1:-82942098 | MS.gene24948:CDS |
| CATCAATAGTGATTTGGAGG+AGG | 0.609738 | 4.1:-82942588 | MS.gene24948:CDS |
| TCCTACGTTGAAAATATAGG+AGG | 0.610840 | 4.1:-82941831 | MS.gene24948:CDS |
| TCTGCAGGTACTTTAGGTGT+AGG | 0.611224 | 4.1:+82943237 | None:intergenic |
| TCAAGGCAGGGATGTTCATG+TGG | 0.611859 | 4.1:+82943687 | None:intergenic |
| TCCGATAGTGTCATCGAACA+AGG | 0.615667 | 4.1:+82941990 | None:intergenic |
| ACCTTGTTCGATGACACTAT+CGG | 0.617580 | 4.1:-82941991 | MS.gene24948:CDS |
| ATCCAAGGATGGTTCAACCA+TGG | 0.634394 | 4.1:-82943832 | MS.gene24948:CDS |
| ACACCTAAAGTACCTGCAGA+AGG | 0.643111 | 4.1:-82943234 | MS.gene24948:CDS |
| ATACATAGTAGAATTCACTC+TGG | 0.647390 | 4.1:+82943310 | None:intergenic |
| TCCAACACAGCAGAAATCCA+AGG | 0.654054 | 4.1:-82943847 | MS.gene24948:CDS |
| ATTTGCTAAACTACTATTGG+GGG | 0.655936 | 4.1:-82944208 | MS.gene24948:CDS |
| ACACAGCAGAAATCCAAGGA+TGG | 0.657465 | 4.1:-82943843 | MS.gene24948:CDS |
| AAATCATCTGAAACAGCGAA+AGG | 0.660205 | 4.1:+82941918 | None:intergenic |
| AAGCAAAATCCAATTCAACC+GGG | 0.681075 | 4.1:-82942422 | MS.gene24948:intron |
| CAAGGATGGTTCAACCATGG+AGG | 0.685494 | 4.1:-82943829 | MS.gene24948:intron |
| AAAGATTCCAAATCAGCATG+GGG | 0.687868 | 4.1:-82942553 | MS.gene24948:CDS |
| AGATGTAGACAGAAGTGACG+CGG | 0.707081 | 4.1:-82942018 | MS.gene24948:CDS |
| CAAATCAAGAACAATCAAGG+AGG | 0.708483 | 4.1:-82944643 | MS.gene24948:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATAACAAGTATTAT+CGG | - | chr4.1:82944337-82944356 | MS.gene24948:intron | 10.0% |
| !!! | TCTATAAATTTTGATATTTA+TGG | - | chr4.1:82942384-82942403 | MS.gene24948:intron | 10.0% |
| !! | AAATATGATCATTATATGTT+GGG | - | chr4.1:82943033-82943052 | MS.gene24948:intron | 15.0% |
| !! | CTAACAAGTATTATTTATTA+TGG | - | chr4.1:82944429-82944448 | MS.gene24948:intron | 15.0% |
| !! | TAAATATGATCATTATATGT+TGG | - | chr4.1:82943032-82943051 | MS.gene24948:intron | 15.0% |
| !! | TATAATGATCATATTTAACT+CGG | + | chr4.1:82943029-82943048 | None:intergenic | 15.0% |
| !! | TGAAAGAAAACAAAAATTTA+AGG | + | chr4.1:82943901-82943920 | None:intergenic | 15.0% |
| !!! | ATTTCAATATACATTCTTTT+TGG | - | chr4.1:82942095-82942114 | MS.gene24948:CDS | 15.0% |
| !!! | TAAATTTTGATATTTATGGT+TGG | - | chr4.1:82942388-82942407 | MS.gene24948:intron | 15.0% |
| !!! | TTTGTTTGTGTTTTATTAAT+AGG | - | chr4.1:82944382-82944401 | MS.gene24948:intron | 15.0% |
| !! | ATAACTATTAACATGCATAA+GGG | - | chr4.1:82942314-82942333 | MS.gene24948:intron | 20.0% |
| !! | ATAATGATCATATTTAACTC+GGG | + | chr4.1:82943028-82943047 | None:intergenic | 20.0% |
| !! | TATAACTATTAACATGCATA+AGG | - | chr4.1:82942313-82942332 | MS.gene24948:intron | 20.0% |
| !!! | ACAAAAACTGTAAGTTTTAT+AGG | - | chr4.1:82943216-82943235 | MS.gene24948:CDS | 20.0% |
| !!! | ATCAATTTCATGCATTTTAT+TGG | - | chr4.1:82942352-82942371 | MS.gene24948:intron | 20.0% |
| !!! | ATTAAGTTGTTTGTACAAAA+AGG | - | chr4.1:82943813-82943832 | MS.gene24948:intron | 20.0% |
| !!! | GCTTATTTTAGTTTATCTAT+TGG | - | chr4.1:82943614-82943633 | MS.gene24948:intron | 20.0% |
| !!! | TCAATTTCATGCATTTTATT+GGG | - | chr4.1:82942353-82942372 | MS.gene24948:intron | 20.0% |
| !!! | TTAAGTTGTTTGTACAAAAA+GGG | - | chr4.1:82943814-82943833 | MS.gene24948:intron | 20.0% |
| !!! | TTAATCCTGATTTGTTATAT+AGG | - | chr4.1:82943252-82943271 | MS.gene24948:CDS | 20.0% |
| !!! | TTTGTTATATAGGATTCAAT+TGG | - | chr4.1:82943262-82943281 | MS.gene24948:CDS | 20.0% |
| ! | AAAATTCATCGGTAATATTC+CGG | + | chr4.1:82943966-82943985 | None:intergenic | 25.0% |
| ! | AACCTTTAAATGATTCTGAA+AGG | - | chr4.1:82941975-82941994 | MS.gene24948:CDS | 25.0% |
| ! | AATGTGATGAACTAAACATA+TGG | + | chr4.1:82942878-82942897 | None:intergenic | 25.0% |
| ! | AGGTGATTGAAATTCATTTA+CGG | - | chr4.1:82942163-82942182 | MS.gene24948:CDS | 25.0% |
| ! | ATGTGATGAACTAAACATAT+GGG | + | chr4.1:82942877-82942896 | None:intergenic | 25.0% |
| ! | CAAGTATTATTTATTATGGC+AGG | - | chr4.1:82944433-82944452 | MS.gene24948:intron | 25.0% |
| ! | TAACTATTAACATGCATAAG+GGG | - | chr4.1:82942315-82942334 | MS.gene24948:intron | 25.0% |
| ! | TGAAAGCTATTCAAGAATAT+TGG | - | chr4.1:82944475-82944494 | MS.gene24948:intron | 25.0% |
| ! | TGAATCCTATATAACAAATC+AGG | + | chr4.1:82943260-82943279 | None:intergenic | 25.0% |
| ! | TTCAAGAATATTGGAAAGTT+TGG | - | chr4.1:82944484-82944503 | MS.gene24948:intron | 25.0% |
| !! | ACCTTTAAATGATTCTGAAA+GGG | - | chr4.1:82941976-82941995 | MS.gene24948:CDS | 25.0% |
| !! | TCTATACTTCAGAATTTTGA+TGG | - | chr4.1:82942587-82942606 | MS.gene24948:CDS | 25.0% |
| !! | TTTGAAACATTTCCTGAAAA+TGG | + | chr4.1:82942635-82942654 | None:intergenic | 25.0% |
| !!! | AGATTTGCTAAACTACTATT+GGG | - | chr4.1:82942442-82942461 | MS.gene24948:CDS | 25.0% |
| !!! | TGCTTTATTATTTTAGCTCA+AGG | + | chr4.1:82942562-82942581 | None:intergenic | 25.0% |
| !!! | TTGTCATCATTTTTTCCTTT+TGG | + | chr4.1:82943385-82943404 | None:intergenic | 25.0% |
| AAAAAGATTCCAAATCAGCA+TGG | - | chr4.1:82944097-82944116 | MS.gene24948:intron | 30.0% | |
| AAAAGATTCCAAATCAGCAT+GGG | - | chr4.1:82944098-82944117 | MS.gene24948:intron | 30.0% | |
| AAACATTTCCTGAAAATGGA+AGG | + | chr4.1:82942631-82942650 | None:intergenic | 30.0% | |
| AACCATTTCAACAACGTAAT+CGG | + | chr4.1:82942786-82942805 | None:intergenic | 30.0% | |
| AAGGAAAAAATGATGACAAG+TGG | - | chr4.1:82943386-82943405 | MS.gene24948:intron | 30.0% | |
| AATGCATTAACAAATCTTGC+TGG | - | chr4.1:82942517-82942536 | MS.gene24948:CDS | 30.0% | |
| ACCCTTTCAGAATCATTTAA+AGG | + | chr4.1:82941980-82941999 | None:intergenic | 30.0% | |
| ATAAACTTATGACGATGATC+AGG | - | chr4.1:82943297-82943316 | MS.gene24948:CDS | 30.0% | |
| ATACATAGTAGAATTCACTC+TGG | + | chr4.1:82943345-82943364 | None:intergenic | 30.0% | |
| ATAGCTTCTAAGCAAATACT+AGG | + | chr4.1:82943842-82943861 | None:intergenic | 30.0% | |
| ATGTTTCAAGAGAAGTAAGA+TGG | + | chr4.1:82944175-82944194 | None:intergenic | 30.0% | |
| ATTTATTATGGCAGGATGTA+GGG | - | chr4.1:82944441-82944460 | MS.gene24948:intron | 30.0% | |
| CAGGGACTAAAAACAAAATT+CGG | + | chr4.1:82943089-82943108 | None:intergenic | 30.0% | |
| CTTATATCCAATGAAGATTG+TGG | + | chr4.1:82944213-82944232 | None:intergenic | 30.0% | |
| GATGGAGAAAAGAAATTGAT+TGG | - | chr4.1:82942747-82942766 | MS.gene24948:intron | 30.0% | |
| GGTTGGATTAAATTCAGAAA+TGG | - | chr4.1:82942405-82942424 | MS.gene24948:intron | 30.0% | |
| TAAGCAAAATCCAATTCAAC+CGG | - | chr4.1:82944229-82944248 | MS.gene24948:CDS | 30.0% | |
| TATTTATTATGGCAGGATGT+AGG | - | chr4.1:82944440-82944459 | MS.gene24948:intron | 30.0% | |
| TATTTGCTTAGAAGCTATGT+TGG | - | chr4.1:82943844-82943863 | MS.gene24948:CDS | 30.0% | |
| TCCAAACTATTCAATTTCAG+AGG | - | chr4.1:82941842-82941861 | MS.gene24948:CDS | 30.0% | |
| TCTTACTTCTCTTGAAACAT+CGG | - | chr4.1:82944175-82944194 | MS.gene24948:CDS | 30.0% | |
| TGACAAATCAAGAACAATCA+AGG | - | chr4.1:82942006-82942025 | MS.gene24948:CDS | 30.0% | |
| TGATCTCAAGAATAGAATTG+AGG | - | chr4.1:82944041-82944060 | MS.gene24948:intron | 30.0% | |
| TGTGATGAACTAAACATATG+GGG | + | chr4.1:82942876-82942895 | None:intergenic | 30.0% | |
| TTCTTTCATCATTCACAGAA+TGG | - | chr4.1:82943913-82943932 | MS.gene24948:CDS | 30.0% | |
| ! | ATTTGCTAAACTACTATTGG+GGG | - | chr4.1:82942444-82942463 | MS.gene24948:CDS | 30.0% |
| ! | CACAATGTTGCATAAACTTT+TGG | - | chr4.1:82944290-82944309 | MS.gene24948:intron | 30.0% |
| ! | GTTTCTTTTTGACATACCTT+AGG | + | chr4.1:82943577-82943596 | None:intergenic | 30.0% |
| ! | TTAATTTTTGCAGTTGTGCA+CGG | + | chr4.1:82942136-82942155 | None:intergenic | 30.0% |
| ! | TTTTTGACATACCTTAGGTA+GGG | + | chr4.1:82943572-82943591 | None:intergenic | 30.0% |
| !! | AGAAATTGATTGGCTTCTTT+CGG | - | chr4.1:82942757-82942776 | MS.gene24948:intron | 30.0% |
| !! | GAGATTTGCTAAACTACTAT+TGG | - | chr4.1:82942441-82942460 | MS.gene24948:CDS | 30.0% |
| !! | GATTTGCTAAACTACTATTG+GGG | - | chr4.1:82942443-82942462 | MS.gene24948:CDS | 30.0% |
| !! | TCCTCTGAAATTGAATAGTT+TGG | + | chr4.1:82941846-82941865 | None:intergenic | 30.0% |
| !! | TGTGCAATTTTGTAACTTGT+GGG | + | chr4.1:82943127-82943146 | None:intergenic | 30.0% |
| !!! | ATGCTGATTTGGAATCTTTT+TGG | + | chr4.1:82944098-82944117 | None:intergenic | 30.0% |
| !!! | GGTTTTTTTTTTTACCTCCA+TGG | + | chr4.1:82942840-82942859 | None:intergenic | 30.0% |
| !!! | TTGAGTTGGATTTTGTGTTT+GGG | + | chr4.1:82944555-82944574 | None:intergenic | 30.0% |
| AAAGATGCTGATGATCCAAA+AGG | - | chr4.1:82943367-82943386 | MS.gene24948:intron | 35.0% | |
| AAAGATTCCAAATCAGCATG+GGG | - | chr4.1:82944099-82944118 | MS.gene24948:intron | 35.0% | |
| AAGCAAAATCCAATTCAACC+GGG | - | chr4.1:82944230-82944249 | MS.gene24948:CDS | 35.0% | |
| AAGCTGAATCGTTCATTAGA+AGG | - | chr4.1:82944708-82944727 | MS.gene24948:CDS | 35.0% | |
| ACCTTGTAATAGCTTCTCTT+TGG | + | chr4.1:82942053-82942072 | None:intergenic | 35.0% | |
| ACTCCTAACGAAATGGTTAA+GGG | - | chr4.1:82942237-82942256 | MS.gene24948:intron | 35.0% | |
| AGAGGAATGTTTGAGAATAC+AGG | - | chr4.1:82941860-82941879 | MS.gene24948:CDS | 35.0% | |
| AGCTGAATCGTTCATTAGAA+GGG | - | chr4.1:82944709-82944728 | MS.gene24948:CDS | 35.0% | |
| AGGGATTCAATATAGCTTTC+AGG | + | chr4.1:82943553-82943572 | None:intergenic | 35.0% | |
| ATACAGGACATATTCTTACC+CGG | + | chr4.1:82944251-82944270 | None:intergenic | 35.0% | |
| ATATTCTTACCCGGTTGAAT+TGG | + | chr4.1:82944242-82944261 | None:intergenic | 35.0% | |
| ATCGGGATCGAAAAATTCAT+CGG | + | chr4.1:82943977-82943996 | None:intergenic | 35.0% | |
| ATGACACTATCGGATTTCAT+GGG | - | chr4.1:82944671-82944690 | MS.gene24948:CDS | 35.0% | |
| CAAACACAAAATCCAACTCA+AGG | - | chr4.1:82944554-82944573 | MS.gene24948:intron | 35.0% | |
| CAAATCAAGAACAATCAAGG+AGG | - | chr4.1:82942009-82942028 | MS.gene24948:CDS | 35.0% | |
| CATTGTATCAAGCTTTCTCA+AGG | + | chr4.1:82942985-82943004 | None:intergenic | 35.0% | |
| CTATATTGAATCCCTACCTA+AGG | - | chr4.1:82943558-82943577 | MS.gene24948:intron | 35.0% | |
| CTGCAAAAATTAATCTCTCG+AGG | - | chr4.1:82942143-82942162 | MS.gene24948:CDS | 35.0% | |
| GAAAAAATGATGACAAGTGG+TGG | - | chr4.1:82943389-82943408 | MS.gene24948:intron | 35.0% | |
| GCTTTCTTATCAGTCACTAT+GGG | + | chr4.1:82944800-82944819 | None:intergenic | 35.0% | |
| GTCTAGGAGACATAATTTAC+CGG | - | chr4.1:82943944-82943963 | MS.gene24948:CDS | 35.0% | |
| TCAAGTACTTAAAGCAGCAA+TGG | - | chr4.1:82943492-82943511 | MS.gene24948:intron | 35.0% | |
| TCCTACGTTGAAAATATAGG+AGG | - | chr4.1:82944821-82944840 | MS.gene24948:CDS | 35.0% | |
| TGCACAAACTCTATCAGAAA+TGG | - | chr4.1:82943522-82943541 | MS.gene24948:intron | 35.0% | |
| TTCAGAAATGGAACAGATGA+AGG | - | chr4.1:82942417-82942436 | MS.gene24948:intron | 35.0% | |
| TTTCCCTTAACCATTTCGTT+AGG | + | chr4.1:82942243-82942262 | None:intergenic | 35.0% | |
| ! | AAATCATCTGAAACAGCGAA+AGG | + | chr4.1:82944737-82944756 | None:intergenic | 35.0% |
| ! | AAATGTTTTTCCATACGCAC+CGG | - | chr4.1:82942203-82942222 | MS.gene24948:intron | 35.0% |
| ! | ACCTCCTATATTTTCAACGT+AGG | + | chr4.1:82944825-82944844 | None:intergenic | 35.0% |
| ! | ATGGCGTTTTGTGGTTTTTA+CGG | - | chr4.1:82943166-82943185 | MS.gene24948:CDS | 35.0% |
| ! | CTTTTTGACATACCTTAGGT+AGG | + | chr4.1:82943573-82943592 | None:intergenic | 35.0% |
| ! | GTGTGCAATTTTGTAACTTG+TGG | + | chr4.1:82943128-82943147 | None:intergenic | 35.0% |
| ! | TAATTTTTGCAGTTGTGCAC+GGG | + | chr4.1:82942135-82942154 | None:intergenic | 35.0% |
| ! | TACTCTTGATAGCACTGTAA+AGG | + | chr4.1:82944510-82944529 | None:intergenic | 35.0% |
| ! | TTAACATGCATAAGGGGTTT+TGG | - | chr4.1:82942321-82942340 | MS.gene24948:intron | 35.0% |
| ! | TTGAGGCATCAATAGTGATT+TGG | - | chr4.1:82944058-82944077 | MS.gene24948:intron | 35.0% |
| ! | TTTCGCTGTTTCAGATGATT+TGG | - | chr4.1:82944736-82944755 | MS.gene24948:CDS | 35.0% |
| !! | AAAAGGTGTTTCTTCAGCTT+TGG | - | chr4.1:82942486-82942505 | MS.gene24948:CDS | 35.0% |
| !!! | ATTAATGCAGCTGCTGTTTT+CGG | - | chr4.1:82942680-82942699 | MS.gene24948:CDS | 35.0% |
| !!! | CTTGAGTTGGATTTTGTGTT+TGG | + | chr4.1:82944556-82944575 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCCTTCCATTTTC+AGG | - | chr4.1:82942620-82942639 | MS.gene24948:CDS | 35.0% |
| AAACCTTCTGCAGGTACTTT+AGG | + | chr4.1:82943424-82943443 | None:intergenic | 40.0% | |
| AACATATGGGGAGAACAAAG+AGG | + | chr4.1:82942864-82942883 | None:intergenic | 40.0% | |
| AATGAAGATTGTGGAAGTCC+GGG | + | chr4.1:82944204-82944223 | None:intergenic | 40.0% | |
| ACCTTGTTCGATGACACTAT+CGG | - | chr4.1:82944661-82944680 | MS.gene24948:CDS | 40.0% | |
| AGCTCATGAAAGCAACTCAT+AGG | - | chr4.1:82943710-82943729 | MS.gene24948:CDS | 40.0% | |
| ATGACATGTCTATTGTCCCT+AGG | + | chr4.1:82944005-82944024 | None:intergenic | 40.0% | |
| CAATGAAGATTGTGGAAGTC+CGG | + | chr4.1:82944205-82944224 | None:intergenic | 40.0% | |
| CGCTTTCTTATCAGTCACTA+TGG | + | chr4.1:82944801-82944820 | None:intergenic | 40.0% | |
| GAAGAGATCAAGATGCATAC+AGG | + | chr4.1:82944267-82944286 | None:intergenic | 40.0% | |
| GACATGTCCACAAACTATCT+AGG | - | chr4.1:82943685-82943704 | MS.gene24948:CDS | 40.0% | |
| GACTCCTAACGAAATGGTTA+AGG | - | chr4.1:82942236-82942255 | MS.gene24948:intron | 40.0% | |
| GAGCTATCCTAGATAGTTTG+TGG | + | chr4.1:82943695-82943714 | None:intergenic | 40.0% | |
| GATGACACTATCGGATTTCA+TGG | - | chr4.1:82944670-82944689 | MS.gene24948:CDS | 40.0% | |
| GCCAAAGAGAAGCTATTACA+AGG | - | chr4.1:82942049-82942068 | MS.gene24948:CDS | 40.0% | |
| GCGTATGGAAAAACATTTGG+TGG | + | chr4.1:82942201-82942220 | None:intergenic | 40.0% | |
| GCGTCCTACGTTGAAAATAT+AGG | - | chr4.1:82944818-82944837 | MS.gene24948:CDS | 40.0% | |
| GGTGCGTATGGAAAAACATT+TGG | + | chr4.1:82942204-82942223 | None:intergenic | 40.0% | |
| TAAGCCAATTCGAACTGTCA+CGG | + | chr4.1:82943599-82943618 | None:intergenic | 40.0% | |
| TATCAAGCTTTCTCAAGGCA+GGG | + | chr4.1:82942980-82942999 | None:intergenic | 40.0% | |
| TATTGTCCCTAGGAACTGAT+CGG | + | chr4.1:82943995-82944014 | None:intergenic | 40.0% | |
| TCACTTCTGTCTACATCTCT+TGG | + | chr4.1:82944632-82944651 | None:intergenic | 40.0% | |
| TTTGTGTTTGGGAATCTGCA+TGG | + | chr4.1:82944544-82944563 | None:intergenic | 40.0% | |
| ! | AATTTTTGCAGTTGTGCACG+GGG | + | chr4.1:82942134-82942153 | None:intergenic | 40.0% |
| ! | AGGCATCAATAGTGATTTGG+AGG | - | chr4.1:82944061-82944080 | MS.gene24948:intron | 40.0% |
| ! | CACCGATTACGTTGTTGAAA+TGG | - | chr4.1:82942781-82942800 | MS.gene24948:intron | 40.0% |
| ! | CATCAATAGTGATTTGGAGG+AGG | - | chr4.1:82944064-82944083 | MS.gene24948:intron | 40.0% |
| ! | TAGCTTCTCTTTGGCTTCTT+TGG | + | chr4.1:82942044-82942063 | None:intergenic | 40.0% |
| !! | GGTTTTTACGGACTAAGAAG+TGG | - | chr4.1:82943178-82943197 | MS.gene24948:CDS | 40.0% |
| !! | GTCACTATGGGTTGAAGTTT+TGG | + | chr4.1:82944788-82944807 | None:intergenic | 40.0% |
| ACACAGCAGAAATCCAAGGA+TGG | - | chr4.1:82942809-82942828 | MS.gene24948:intron | 45.0% | |
| AGATGTAGACAGAAGTGACG+CGG | - | chr4.1:82944634-82944653 | MS.gene24948:CDS | 45.0% | |
| ATATGGGGAGAACAAAGAGG+AGG | + | chr4.1:82942861-82942880 | None:intergenic | 45.0% | |
| ATCCAAGGATGGTTCAACCA+TGG | - | chr4.1:82942820-82942839 | MS.gene24948:intron | 45.0% | |
| ATTGTCCCTAGGAACTGATC+GGG | + | chr4.1:82943994-82944013 | None:intergenic | 45.0% | |
| CACTATCGGATTTCATGGGT+TGG | - | chr4.1:82944675-82944694 | MS.gene24948:CDS | 45.0% | |
| CAGAATGGAAGAGCAAGTCT+AGG | - | chr4.1:82943928-82943947 | MS.gene24948:CDS | 45.0% | |
| CCTGCTTCATCAAGAAGTCA+AGG | - | chr4.1:82941947-82941966 | MS.gene24948:CDS | 45.0% | |
| CCTTGACTTCTTGATGAAGC+AGG | + | chr4.1:82941950-82941969 | None:intergenic | 45.0% | |
| CGGACTAAGAAGTGGATACA+AGG | - | chr4.1:82943186-82943205 | MS.gene24948:CDS | 45.0% | |
| CGGACTTCCACAATCTTCAT+TGG | - | chr4.1:82944203-82944222 | MS.gene24948:CDS | 45.0% | |
| CTATTGGGGGAAGATATGTC+TGG | - | chr4.1:82942457-82942476 | MS.gene24948:CDS | 45.0% | |
| CTCCATCTTGCTTTCCTTTC+CGG | + | chr4.1:82942734-82942753 | None:intergenic | 45.0% | |
| CTGCTTCTTCTTCCTTGAGT+TGG | + | chr4.1:82944569-82944588 | None:intergenic | 45.0% | |
| CTGTCTACATCTCTTGGAGT+TGG | + | chr4.1:82944626-82944645 | None:intergenic | 45.0% | |
| GAAACCGTGACAGTTCGAAT+TGG | - | chr4.1:82943592-82943611 | MS.gene24948:intron | 45.0% | |
| GATATGTCTGGTGGAGGAAA+AGG | - | chr4.1:82942469-82942488 | MS.gene24948:CDS | 45.0% | |
| GCAGGATCATCTTCAGAAGT+AGG | + | chr4.1:82941932-82941951 | None:intergenic | 45.0% | |
| GCTTCAGATAAACCTTCTGC+AGG | + | chr4.1:82943433-82943452 | None:intergenic | 45.0% | |
| GGATTGGACTCCTAACGAAA+TGG | - | chr4.1:82942230-82942249 | MS.gene24948:intron | 45.0% | |
| GGGACTGAGAAGTGAATACA+GGG | + | chr4.1:82943107-82943126 | None:intergenic | 45.0% | |
| GTATCAAGCTTTCTCAAGGC+AGG | + | chr4.1:82942981-82943000 | None:intergenic | 45.0% | |
| TCCAACACAGCAGAAATCCA+AGG | - | chr4.1:82942805-82942824 | MS.gene24948:intron | 45.0% | |
| TCCGATAGTGTCATCGAACA+AGG | + | chr4.1:82944665-82944684 | None:intergenic | 45.0% | |
| TCCTTGGATTTCTGCTGTGT+TGG | + | chr4.1:82942809-82942828 | None:intergenic | 45.0% | |
| TCTGCAGGTACTTTAGGTGT+AGG | + | chr4.1:82943418-82943437 | None:intergenic | 45.0% | |
| TGGGACTGAGAAGTGAATAC+AGG | + | chr4.1:82943108-82943127 | None:intergenic | 45.0% | |
| ! | ACACCTAAAGTACCTGCAGA+AGG | - | chr4.1:82943418-82943437 | MS.gene24948:intron | 45.0% |
| !! | CTCTTGAAACATCGGTTTCC+CGG | - | chr4.1:82944183-82944202 | MS.gene24948:CDS | 45.0% |
| ACAAAACGCCATGCTCGTTC+GGG | + | chr4.1:82943158-82943177 | None:intergenic | 50.0% | |
| AGTTGTGCACGGGGATATCT+TGG | + | chr4.1:82942125-82942144 | None:intergenic | 50.0% | |
| ATGGGGTTCTGCTGTGAGTT+TGG | - | chr4.1:82944116-82944135 | MS.gene24948:intron | 50.0% | |
| CAAGGATGGTTCAACCATGG+AGG | - | chr4.1:82942823-82942842 | MS.gene24948:intron | 50.0% | |
| CACAAAACGCCATGCTCGTT+CGG | + | chr4.1:82943159-82943178 | None:intergenic | 50.0% | |
| CACCGGAAAGGAAAGCAAGA+TGG | - | chr4.1:82942729-82942748 | MS.gene24948:intron | 50.0% | |
| CATCTTGCTTTCCTTTCCGG+TGG | + | chr4.1:82942731-82942750 | None:intergenic | 50.0% | |
| CTCCATGGTTGAACCATCCT+TGG | + | chr4.1:82942825-82942844 | None:intergenic | 50.0% | |
| CTTGGAGTTGGACACTTGTC+TGG | + | chr4.1:82944614-82944633 | None:intergenic | 50.0% | |
| TCAAGGCAGGGATGTTCATG+TGG | + | chr4.1:82942968-82942987 | None:intergenic | 50.0% | |
| TCGATCCCGATCAGTTCCTA+GGG | - | chr4.1:82943986-82944005 | MS.gene24948:intron | 50.0% | |
| TTAGGAGTCCAATCCCTGAC+CGG | + | chr4.1:82942225-82942244 | None:intergenic | 50.0% | |
| TTCGATCCCGATCAGTTCCT+AGG | - | chr4.1:82943985-82944004 | MS.gene24948:intron | 50.0% | |
| TTGGGGGAAGATATGTCTGG+TGG | - | chr4.1:82942460-82942479 | MS.gene24948:CDS | 50.0% | |
| ! | AGCAGAACCCCATGCTGATT+TGG | + | chr4.1:82944109-82944128 | None:intergenic | 50.0% |
| ! | CTTTTAGTCCCGAACGAGCA+TGG | - | chr4.1:82943147-82943166 | MS.gene24948:CDS | 50.0% |
| ! | GTTGGACACTTGTCTGGCTT+TGG | + | chr4.1:82944608-82944627 | None:intergenic | 50.0% |
| !! | CACTTGTCTGGCTTTGGAAC+TGG | + | chr4.1:82944602-82944621 | None:intergenic | 50.0% |
| !! | TTTTCCATACGCACCGGTCA+GGG | - | chr4.1:82942209-82942228 | MS.gene24948:intron | 50.0% |
| !! | TTTTTCCATACGCACCGGTC+AGG | - | chr4.1:82942208-82942227 | MS.gene24948:intron | 50.0% |
| GCTTTCCTTTCCGGTGGCAT+TGG | + | chr4.1:82942725-82942744 | None:intergenic | 55.0% | |
| GGGGAAGATATGTCTGGTGG+AGG | - | chr4.1:82942463-82942482 | MS.gene24948:CDS | 55.0% | |
| TAGAGCCAATGCCACCGGAA+AGG | - | chr4.1:82942717-82942736 | MS.gene24948:CDS | 55.0% | |
| ! | CGAACGAGCATGGCGTTTTG+TGG | - | chr4.1:82943157-82943176 | MS.gene24948:CDS | 55.0% |
| !! | TTTCCGGTGGCATTGGCTCT+AGG | + | chr4.1:82942718-82942737 | None:intergenic | 55.0% |
| CAATCCCTGACCGGTGCGTA+TGG | + | chr4.1:82942216-82942235 | None:intergenic | 60.0% | |
| ! | CATACGCACCGGTCAGGGAT+TGG | - | chr4.1:82942214-82942233 | MS.gene24948:intron | 60.0% |
| GCGCCTAGAGCCAATGCCAC+CGG | - | chr4.1:82942712-82942731 | MS.gene24948:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 82941803 | 82944871 | 82941803 | ID=MS.gene24948 |
| chr4.1 | mRNA | 82941803 | 82944871 | 82941803 | ID=MS.gene24948.t1;Parent=MS.gene24948 |
| chr4.1 | exon | 82944604 | 82944871 | 82944604 | ID=MS.gene24948.t1.exon1;Parent=MS.gene24948.t1 |
| chr4.1 | CDS | 82944604 | 82944871 | 82944604 | ID=cds.MS.gene24948.t1;Parent=MS.gene24948.t1 |
| chr4.1 | exon | 82944136 | 82944252 | 82944136 | ID=MS.gene24948.t1.exon2;Parent=MS.gene24948.t1 |
| chr4.1 | CDS | 82944136 | 82944252 | 82944136 | ID=cds.MS.gene24948.t1;Parent=MS.gene24948.t1 |
| chr4.1 | exon | 82943830 | 82943984 | 82943830 | ID=MS.gene24948.t1.exon3;Parent=MS.gene24948.t1 |
| chr4.1 | CDS | 82943830 | 82943984 | 82943830 | ID=cds.MS.gene24948.t1;Parent=MS.gene24948.t1 |
| chr4.1 | exon | 82943664 | 82943738 | 82943664 | ID=MS.gene24948.t1.exon4;Parent=MS.gene24948.t1 |
| chr4.1 | CDS | 82943664 | 82943738 | 82943664 | ID=cds.MS.gene24948.t1;Parent=MS.gene24948.t1 |
| chr4.1 | exon | 82943095 | 82943355 | 82943095 | ID=MS.gene24948.t1.exon5;Parent=MS.gene24948.t1 |
| chr4.1 | CDS | 82943095 | 82943355 | 82943095 | ID=cds.MS.gene24948.t1;Parent=MS.gene24948.t1 |
| chr4.1 | exon | 82942423 | 82942743 | 82942423 | ID=MS.gene24948.t1.exon6;Parent=MS.gene24948.t1 |
| chr4.1 | CDS | 82942423 | 82942743 | 82942423 | ID=cds.MS.gene24948.t1;Parent=MS.gene24948.t1 |
| chr4.1 | exon | 82941803 | 82942219 | 82941803 | ID=MS.gene24948.t1.exon7;Parent=MS.gene24948.t1 |
| chr4.1 | CDS | 82941803 | 82942219 | 82941803 | ID=cds.MS.gene24948.t1;Parent=MS.gene24948.t1 |
| Gene Sequence |
| Protein sequence |
