Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25205.t1 | XP_013466539.1 | 98.4 | 498 | 8 | 0 | 1 | 498 | 1 | 498 | 3.50E-276 | 960.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25205.t1 | Q9ZU91 | 72.8 | 497 | 132 | 2 | 4 | 497 | 3 | 499 | 8.9e-204 | 711.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25205.t1 | A0A072VG45 | 98.4 | 498 | 8 | 0 | 1 | 498 | 1 | 498 | 2.5e-276 | 960.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene25205 | MS.gene030216 | PPI |
| MS.gene25205 | MS.gene26730 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25205.t1 | MTR_1g031900 | 98.394 | 498 | 8 | 0 | 1 | 498 | 1 | 498 | 0.0 | 996 |
| MS.gene25205.t1 | MTR_1g031900 | 99.105 | 447 | 4 | 0 | 1 | 447 | 1 | 447 | 0.0 | 907 |
| MS.gene25205.t1 | MTR_5g078200 | 71.895 | 459 | 128 | 1 | 3 | 460 | 1 | 459 | 0.0 | 709 |
| MS.gene25205.t1 | MTR_5g078200 | 74.178 | 426 | 110 | 0 | 35 | 460 | 1 | 426 | 0.0 | 687 |
| MS.gene25205.t1 | MTR_3g065460 | 64.257 | 498 | 171 | 2 | 1 | 498 | 1 | 491 | 0.0 | 662 |
| MS.gene25205.t1 | MTR_4g132280 | 54.757 | 515 | 203 | 5 | 5 | 496 | 7 | 514 | 0.0 | 564 |
| MS.gene25205.t1 | MTR_8g085720 | 50.800 | 500 | 236 | 4 | 1 | 498 | 7 | 498 | 5.57e-179 | 512 |
| MS.gene25205.t1 | MTR_3g083580 | 52.570 | 428 | 200 | 2 | 22 | 448 | 24 | 449 | 2.77e-169 | 487 |
| MS.gene25205.t1 | MTR_5g085580 | 42.377 | 446 | 231 | 3 | 24 | 446 | 25 | 467 | 2.79e-122 | 366 |
| MS.gene25205.t1 | MTR_6g088885 | 39.703 | 471 | 269 | 4 | 1 | 459 | 1 | 468 | 2.40e-117 | 355 |
| MS.gene25205.t1 | MTR_1g056640 | 39.606 | 457 | 239 | 3 | 24 | 446 | 38 | 491 | 2.82e-116 | 352 |
| MS.gene25205.t1 | MTR_8g102340 | 41.429 | 420 | 229 | 3 | 82 | 495 | 52 | 460 | 4.73e-106 | 325 |
| MS.gene25205.t1 | MTR_8g012400 | 37.093 | 461 | 270 | 9 | 2 | 446 | 3 | 459 | 6.62e-95 | 295 |
| MS.gene25205.t1 | MTR_4g069940 | 36.543 | 457 | 272 | 5 | 4 | 446 | 8 | 460 | 8.09e-95 | 295 |
| MS.gene25205.t1 | MTR_3g116510 | 35.683 | 454 | 278 | 5 | 4 | 447 | 7 | 456 | 2.30e-92 | 289 |
| MS.gene25205.t1 | MTR_4g088155 | 35.421 | 463 | 277 | 8 | 1 | 446 | 1 | 458 | 5.26e-91 | 285 |
| MS.gene25205.t1 | MTR_7g053500 | 33.716 | 436 | 272 | 6 | 25 | 446 | 27 | 459 | 4.56e-88 | 278 |
| MS.gene25205.t1 | MTR_1g022160 | 34.858 | 459 | 264 | 5 | 21 | 447 | 21 | 476 | 2.90e-87 | 276 |
| MS.gene25205.t1 | MTR_3g080410 | 42.508 | 327 | 184 | 2 | 24 | 349 | 26 | 349 | 3.39e-87 | 272 |
| MS.gene25205.t1 | MTR_7g026340 | 38.621 | 435 | 241 | 10 | 24 | 443 | 23 | 446 | 8.56e-86 | 271 |
| MS.gene25205.t1 | MTR_1g022160 | 34.792 | 457 | 263 | 5 | 21 | 445 | 21 | 474 | 1.61e-85 | 272 |
| MS.gene25205.t1 | MTR_4g083500 | 36.659 | 461 | 256 | 11 | 24 | 456 | 44 | 496 | 1.70e-84 | 271 |
| MS.gene25205.t1 | MTR_1g022160 | 34.444 | 450 | 260 | 5 | 21 | 438 | 21 | 467 | 1.52e-82 | 264 |
| MS.gene25205.t1 | MTR_8g012400 | 36.939 | 379 | 224 | 7 | 80 | 446 | 4 | 379 | 1.95e-78 | 250 |
| MS.gene25205.t1 | MTR_7g053500 | 34.375 | 384 | 235 | 6 | 77 | 446 | 2 | 382 | 6.87e-76 | 244 |
| MS.gene25205.t1 | MTR_4g114850 | 40.741 | 324 | 188 | 2 | 25 | 347 | 27 | 347 | 6.55e-75 | 240 |
| MS.gene25205.t1 | MTR_4g114850 | 40.741 | 324 | 188 | 2 | 25 | 347 | 27 | 347 | 6.98e-75 | 241 |
| MS.gene25205.t1 | MTR_4g114850 | 40.741 | 324 | 188 | 2 | 25 | 347 | 27 | 347 | 1.47e-74 | 240 |
| MS.gene25205.t1 | MTR_4g010200 | 39.506 | 324 | 192 | 2 | 25 | 347 | 34 | 354 | 2.53e-74 | 240 |
| MS.gene25205.t1 | MTR_1g007810 | 42.424 | 330 | 175 | 8 | 17 | 341 | 9 | 328 | 3.40e-74 | 239 |
| MS.gene25205.t1 | MTR_4g052970 | 37.037 | 324 | 199 | 3 | 25 | 347 | 30 | 349 | 1.54e-73 | 238 |
| MS.gene25205.t1 | MTR_4g084480 | 36.126 | 382 | 237 | 5 | 1 | 379 | 8 | 385 | 1.17e-72 | 236 |
| MS.gene25205.t1 | MTR_1g077990 | 40.432 | 324 | 181 | 5 | 24 | 343 | 31 | 346 | 1.54e-72 | 236 |
| MS.gene25205.t1 | MTR_4g084480 | 37.931 | 348 | 210 | 4 | 1 | 346 | 8 | 351 | 2.85e-72 | 234 |
| MS.gene25205.t1 | MTR_4g084480 | 37.931 | 348 | 210 | 4 | 1 | 346 | 1 | 344 | 3.04e-72 | 234 |
| MS.gene25205.t1 | MTR_1g053320 | 33.755 | 474 | 273 | 17 | 3 | 453 | 12 | 467 | 9.43e-67 | 223 |
| MS.gene25205.t1 | MTR_4g076430 | 38.053 | 339 | 194 | 6 | 5 | 343 | 4 | 326 | 1.89e-66 | 217 |
| MS.gene25205.t1 | MTR_1g010120 | 34.716 | 458 | 262 | 17 | 5 | 445 | 11 | 448 | 3.17e-66 | 221 |
| MS.gene25205.t1 | MTR_2g019345 | 36.207 | 348 | 208 | 5 | 1 | 343 | 1 | 339 | 5.06e-66 | 218 |
| MS.gene25205.t1 | MTR_4g076255 | 38.253 | 332 | 187 | 7 | 15 | 345 | 16 | 330 | 8.32e-66 | 216 |
| MS.gene25205.t1 | MTR_4g076440 | 37.463 | 339 | 196 | 6 | 5 | 343 | 4 | 326 | 1.60e-65 | 215 |
| MS.gene25205.t1 | MTR_1g022160 | 36.697 | 327 | 204 | 2 | 21 | 346 | 21 | 345 | 4.85e-65 | 216 |
| MS.gene25205.t1 | MTR_4g076490 | 35.342 | 365 | 203 | 6 | 1 | 347 | 56 | 405 | 1.09e-64 | 216 |
| MS.gene25205.t1 | MTR_2g086530 | 36.025 | 322 | 199 | 4 | 25 | 345 | 9 | 324 | 1.70e-64 | 213 |
| MS.gene25205.t1 | MTR_2g086530 | 36.025 | 322 | 199 | 4 | 25 | 345 | 30 | 345 | 3.80e-64 | 213 |
| MS.gene25205.t1 | MTR_4g076470 | 37.690 | 329 | 189 | 6 | 5 | 333 | 4 | 316 | 4.83e-64 | 211 |
| MS.gene25205.t1 | MTR_3g108600 | 34.043 | 470 | 258 | 16 | 5 | 458 | 15 | 448 | 7.58e-64 | 215 |
| MS.gene25205.t1 | MTR_3g116510 | 36.111 | 324 | 195 | 3 | 132 | 447 | 3 | 322 | 2.05e-63 | 209 |
| MS.gene25205.t1 | MTR_7g081350 | 34.884 | 344 | 211 | 7 | 1 | 343 | 4 | 335 | 7.25e-62 | 206 |
| MS.gene25205.t1 | MTR_8g092070 | 30.958 | 449 | 284 | 15 | 24 | 458 | 34 | 470 | 1.52e-61 | 211 |
| MS.gene25205.t1 | MTR_4g112025 | 30.786 | 458 | 286 | 16 | 5 | 446 | 15 | 457 | 7.91e-61 | 208 |
| MS.gene25205.t1 | MTR_3g031770 | 34.842 | 442 | 247 | 15 | 24 | 446 | 27 | 446 | 1.44e-60 | 206 |
| MS.gene25205.t1 | MTR_2g034480 | 37.209 | 344 | 203 | 7 | 6 | 347 | 9 | 341 | 2.14e-60 | 202 |
| MS.gene25205.t1 | MTR_7g085390 | 32.877 | 438 | 265 | 16 | 24 | 445 | 26 | 450 | 2.73e-60 | 206 |
| MS.gene25205.t1 | MTR_2g027560 | 33.105 | 438 | 268 | 14 | 21 | 445 | 25 | 450 | 2.30e-59 | 203 |
| MS.gene25205.t1 | MTR_4g076500 | 35.404 | 322 | 194 | 5 | 24 | 343 | 78 | 387 | 6.65e-57 | 194 |
| MS.gene25205.t1 | MTR_4g124440 | 32.599 | 454 | 279 | 16 | 6 | 445 | 11 | 451 | 8.37e-57 | 197 |
| MS.gene25205.t1 | MTR_2g034470 | 36.890 | 328 | 194 | 7 | 22 | 347 | 28 | 344 | 1.36e-56 | 192 |
| MS.gene25205.t1 | MTR_2g034440 | 37.539 | 317 | 185 | 7 | 22 | 336 | 20 | 325 | 4.40e-56 | 190 |
| MS.gene25205.t1 | MTR_6g032820 | 32.063 | 446 | 261 | 16 | 8 | 429 | 10 | 437 | 4.60e-56 | 193 |
| MS.gene25205.t1 | MTR_2g034470 | 36.709 | 316 | 187 | 7 | 34 | 347 | 5 | 309 | 3.86e-55 | 187 |
| MS.gene25205.t1 | MTR_4g076570 | 33.548 | 310 | 197 | 3 | 24 | 333 | 22 | 322 | 5.10e-55 | 188 |
| MS.gene25205.t1 | MTR_3g095050 | 30.296 | 439 | 274 | 17 | 24 | 446 | 34 | 456 | 2.27e-53 | 187 |
| MS.gene25205.t1 | MTR_1g052430 | 33.548 | 310 | 197 | 4 | 24 | 333 | 32 | 332 | 2.93e-51 | 179 |
| MS.gene25205.t1 | MTR_7g081370 | 32.710 | 321 | 190 | 8 | 24 | 343 | 28 | 323 | 2.65e-47 | 167 |
| MS.gene25205.t1 | MTR_5g081720 | 33.667 | 300 | 183 | 9 | 48 | 341 | 59 | 348 | 6.70e-40 | 148 |
| MS.gene25205.t1 | MTR_4g134280 | 31.503 | 346 | 213 | 13 | 112 | 445 | 3 | 336 | 1.42e-38 | 144 |
| MS.gene25205.t1 | MTR_8g085390 | 48.454 | 97 | 45 | 2 | 360 | 452 | 29 | 124 | 9.49e-25 | 101 |
| MS.gene25205.t1 | MTR_8g089400 | 43.860 | 114 | 59 | 2 | 339 | 450 | 18 | 128 | 7.61e-24 | 98.2 |
| MS.gene25205.t1 | MTR_8g089400 | 45.631 | 103 | 51 | 2 | 350 | 450 | 49 | 148 | 1.88e-23 | 97.8 |
| MS.gene25205.t1 | MTR_4g079530 | 44.248 | 113 | 58 | 2 | 359 | 466 | 35 | 147 | 6.13e-22 | 93.2 |
| MS.gene25205.t1 | MTR_4g079530 | 47.727 | 88 | 46 | 0 | 359 | 446 | 35 | 122 | 1.04e-21 | 91.3 |
| MS.gene25205.t1 | MTR_5g097420 | 45.882 | 85 | 46 | 0 | 359 | 443 | 28 | 112 | 2.46e-21 | 89.7 |
| MS.gene25205.t1 | MTR_4g083070 | 46.154 | 91 | 47 | 2 | 361 | 450 | 21 | 110 | 2.29e-20 | 89.4 |
| MS.gene25205.t1 | MTR_7g111600 | 48.837 | 86 | 43 | 1 | 361 | 446 | 160 | 244 | 2.53e-19 | 88.2 |
| MS.gene25205.t1 | MTR_7g111600 | 48.837 | 86 | 43 | 1 | 361 | 446 | 160 | 244 | 4.29e-19 | 88.2 |
| MS.gene25205.t1 | MTR_7g111600 | 48.837 | 86 | 43 | 1 | 361 | 446 | 160 | 244 | 4.77e-19 | 88.2 |
| MS.gene25205.t1 | MTR_8g085440 | 39.326 | 89 | 53 | 1 | 358 | 446 | 29 | 116 | 7.49e-19 | 82.8 |
| MS.gene25205.t1 | MTR_3g048280 | 40.741 | 108 | 63 | 1 | 338 | 445 | 89 | 195 | 2.05e-18 | 84.0 |
| MS.gene25205.t1 | MTR_4g133735 | 44.706 | 85 | 47 | 0 | 361 | 445 | 28 | 112 | 4.10e-18 | 80.5 |
| MS.gene25205.t1 | MTR_5g091650 | 44.944 | 89 | 48 | 1 | 360 | 448 | 107 | 194 | 7.14e-18 | 82.4 |
| MS.gene25205.t1 | MTR_5g091650 | 43.011 | 93 | 52 | 1 | 356 | 448 | 103 | 194 | 8.81e-18 | 84.0 |
| MS.gene25205.t1 | MTR_2g049670 | 50.588 | 85 | 40 | 2 | 361 | 445 | 158 | 240 | 9.10e-18 | 84.7 |
| MS.gene25205.t1 | MTR_4g133730 | 41.176 | 85 | 50 | 0 | 361 | 445 | 28 | 112 | 4.60e-17 | 77.4 |
| MS.gene25205.t1 | MTR_4g109490 | 45.882 | 85 | 44 | 2 | 361 | 445 | 24 | 106 | 9.64e-17 | 79.7 |
| MS.gene25205.t1 | MTR_1g084820 | 48.193 | 83 | 41 | 2 | 359 | 441 | 418 | 498 | 1.06e-16 | 83.2 |
| MS.gene25205.t1 | MTR_1g084820 | 48.193 | 83 | 41 | 2 | 359 | 441 | 418 | 498 | 1.13e-16 | 83.2 |
| MS.gene25205.t1 | MTR_2g072500 | 41.379 | 87 | 49 | 1 | 359 | 445 | 6 | 90 | 1.87e-16 | 75.1 |
| MS.gene25205.t1 | MTR_5g015720 | 44.318 | 88 | 48 | 1 | 359 | 445 | 327 | 414 | 3.28e-16 | 80.9 |
| MS.gene25205.t1 | MTR_1g116870 | 42.353 | 85 | 48 | 1 | 361 | 445 | 276 | 359 | 4.52e-16 | 80.1 |
| MS.gene25205.t1 | MTR_8g085400 | 44.444 | 81 | 41 | 2 | 359 | 439 | 31 | 107 | 5.84e-16 | 74.3 |
| MS.gene25205.t1 | MTR_8g085420 | 37.349 | 83 | 51 | 1 | 359 | 441 | 30 | 111 | 1.27e-15 | 74.3 |
| MS.gene25205.t1 | MTR_5g044530 | 38.889 | 90 | 52 | 2 | 361 | 448 | 22 | 110 | 3.46e-15 | 75.9 |
| MS.gene25205.t1 | MTR_8g088120 | 50.000 | 76 | 37 | 1 | 373 | 448 | 60 | 134 | 6.23e-15 | 74.3 |
| MS.gene25205.t1 | MTR_3g082080 | 44.304 | 79 | 43 | 1 | 361 | 439 | 157 | 234 | 1.86e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25205.t1 | AT2G01630 | 75.817 | 459 | 110 | 1 | 21 | 478 | 20 | 478 | 0.0 | 726 |
| MS.gene25205.t1 | AT2G01630 | 78.043 | 419 | 92 | 0 | 21 | 439 | 20 | 438 | 0.0 | 691 |
| MS.gene25205.t1 | AT1G66250 | 68.710 | 473 | 139 | 5 | 22 | 488 | 30 | 499 | 0.0 | 674 |
| MS.gene25205.t1 | AT2G01630 | 78.167 | 371 | 81 | 0 | 21 | 391 | 20 | 390 | 0.0 | 607 |
| MS.gene25205.t1 | AT1G11820 | 61.124 | 445 | 170 | 1 | 21 | 462 | 41 | 485 | 0.0 | 590 |
| MS.gene25205.t1 | AT1G11820 | 61.575 | 419 | 161 | 0 | 21 | 439 | 41 | 459 | 0.0 | 563 |
| MS.gene25205.t1 | AT3G13560 | 53.708 | 445 | 203 | 2 | 22 | 464 | 24 | 467 | 2.71e-167 | 482 |
| MS.gene25205.t1 | AT3G13560 | 53.708 | 445 | 203 | 2 | 22 | 464 | 24 | 467 | 2.71e-167 | 482 |
| MS.gene25205.t1 | AT3G13560 | 53.708 | 445 | 203 | 2 | 22 | 464 | 24 | 467 | 2.71e-167 | 482 |
| MS.gene25205.t1 | AT3G13560 | 53.708 | 445 | 203 | 2 | 22 | 464 | 24 | 467 | 2.71e-167 | 482 |
| MS.gene25205.t1 | AT3G13560 | 53.708 | 445 | 203 | 2 | 22 | 464 | 24 | 467 | 2.71e-167 | 482 |
| MS.gene25205.t1 | AT1G11820 | 62.121 | 330 | 125 | 0 | 21 | 350 | 41 | 370 | 6.45e-152 | 439 |
| MS.gene25205.t1 | AT2G05790 | 43.080 | 448 | 227 | 3 | 24 | 446 | 25 | 469 | 2.45e-122 | 366 |
| MS.gene25205.t1 | AT4G26830 | 40.919 | 457 | 254 | 6 | 1 | 446 | 1 | 452 | 7.15e-120 | 359 |
| MS.gene25205.t1 | AT4G26830 | 41.667 | 432 | 239 | 4 | 24 | 446 | 29 | 456 | 2.64e-118 | 355 |
| MS.gene25205.t1 | AT5G55180 | 40.225 | 445 | 252 | 3 | 13 | 446 | 16 | 457 | 6.62e-118 | 355 |
| MS.gene25205.t1 | AT5G56590 | 39.955 | 448 | 255 | 5 | 24 | 461 | 26 | 469 | 9.01e-117 | 353 |
| MS.gene25205.t1 | AT4G29360 | 39.545 | 483 | 256 | 4 | 5 | 454 | 8 | 487 | 5.01e-116 | 352 |
| MS.gene25205.t1 | AT4G29360 | 40.042 | 472 | 247 | 4 | 16 | 454 | 29 | 497 | 1.58e-115 | 351 |
| MS.gene25205.t1 | AT5G55180 | 40.091 | 439 | 249 | 3 | 13 | 440 | 16 | 451 | 6.65e-114 | 344 |
| MS.gene25205.t1 | AT4G34480 | 39.556 | 450 | 264 | 4 | 1 | 446 | 3 | 448 | 2.83e-104 | 321 |
| MS.gene25205.t1 | AT2G16230 | 38.128 | 438 | 260 | 4 | 19 | 449 | 20 | 453 | 5.28e-102 | 315 |
| MS.gene25205.t1 | AT5G24318 | 39.002 | 441 | 247 | 9 | 16 | 443 | 22 | 453 | 1.10e-99 | 308 |
| MS.gene25205.t1 | AT5G24318 | 38.902 | 437 | 245 | 9 | 16 | 439 | 22 | 449 | 4.30e-97 | 301 |
| MS.gene25205.t1 | AT3G07320 | 36.322 | 435 | 260 | 8 | 25 | 446 | 26 | 456 | 5.38e-90 | 283 |
| MS.gene25205.t1 | AT3G23770 | 36.136 | 440 | 260 | 6 | 24 | 446 | 37 | 472 | 2.58e-86 | 274 |
| MS.gene25205.t1 | AT4G14080 | 32.845 | 478 | 285 | 9 | 1 | 446 | 1 | 474 | 1.63e-84 | 269 |
| MS.gene25205.t1 | AT3G55430 | 36.636 | 434 | 250 | 13 | 24 | 445 | 29 | 449 | 7.31e-84 | 266 |
| MS.gene25205.t1 | AT4G34480 | 41.298 | 339 | 191 | 4 | 112 | 446 | 3 | 337 | 5.79e-77 | 247 |
| MS.gene25205.t1 | AT2G26600 | 38.750 | 320 | 192 | 2 | 25 | 343 | 35 | 351 | 2.44e-74 | 240 |
| MS.gene25205.t1 | AT5G24318 | 39.773 | 352 | 200 | 7 | 16 | 364 | 22 | 364 | 6.17e-74 | 238 |
| MS.gene25205.t1 | AT5G24318 | 39.077 | 325 | 177 | 6 | 133 | 445 | 1 | 316 | 3.13e-73 | 234 |
| MS.gene25205.t1 | AT1G32860 | 40.123 | 324 | 185 | 5 | 24 | 343 | 29 | 347 | 3.46e-73 | 238 |
| MS.gene25205.t1 | AT3G15800 | 38.769 | 325 | 194 | 3 | 25 | 347 | 44 | 365 | 2.83e-71 | 232 |
| MS.gene25205.t1 | AT4G34480 | 38.728 | 346 | 208 | 2 | 1 | 345 | 3 | 345 | 4.41e-71 | 230 |
| MS.gene25205.t1 | AT2G27500 | 35.077 | 325 | 207 | 2 | 24 | 347 | 29 | 350 | 4.05e-70 | 228 |
| MS.gene25205.t1 | AT2G27500 | 35.077 | 325 | 207 | 2 | 24 | 347 | 29 | 350 | 7.76e-70 | 228 |
| MS.gene25205.t1 | AT2G39640 | 34.146 | 451 | 275 | 14 | 4 | 446 | 7 | 443 | 1.39e-69 | 232 |
| MS.gene25205.t1 | AT2G39640 | 40.909 | 88 | 51 | 1 | 361 | 448 | 460 | 546 | 3.77e-16 | 81.6 |
| MS.gene25205.t1 | AT5G58090 | 34.554 | 437 | 260 | 14 | 24 | 446 | 22 | 446 | 1.94e-69 | 229 |
| MS.gene25205.t1 | AT4G18340 | 37.006 | 354 | 213 | 4 | 7 | 354 | 12 | 361 | 2.28e-69 | 227 |
| MS.gene25205.t1 | AT5G42100 | 38.957 | 326 | 191 | 5 | 24 | 345 | 27 | 348 | 7.27e-69 | 227 |
| MS.gene25205.t1 | AT4G18340 | 37.006 | 354 | 213 | 4 | 7 | 354 | 12 | 361 | 7.60e-69 | 226 |
| MS.gene25205.t1 | AT1G30080 | 40.060 | 332 | 192 | 4 | 5 | 333 | 15 | 342 | 7.92e-69 | 225 |
| MS.gene25205.t1 | AT5G42100 | 39.198 | 324 | 189 | 5 | 24 | 343 | 27 | 346 | 8.80e-69 | 226 |
| MS.gene25205.t1 | AT1G30080 | 40.060 | 332 | 192 | 4 | 5 | 333 | 15 | 342 | 1.83e-68 | 225 |
| MS.gene25205.t1 | AT4G16260 | 37.069 | 348 | 208 | 6 | 1 | 348 | 1 | 337 | 1.40e-66 | 218 |
| MS.gene25205.t1 | AT5G42720 | 36.522 | 345 | 213 | 4 | 4 | 346 | 7 | 347 | 3.63e-66 | 220 |
| MS.gene25205.t1 | AT3G57270 | 38.700 | 323 | 187 | 5 | 24 | 345 | 27 | 339 | 7.94e-66 | 216 |
| MS.gene25205.t1 | AT4G16260 | 38.730 | 315 | 182 | 6 | 34 | 348 | 5 | 308 | 1.58e-65 | 214 |
| MS.gene25205.t1 | AT4G31140 | 33.843 | 458 | 270 | 16 | 4 | 445 | 8 | 448 | 6.04e-65 | 218 |
| MS.gene25205.t1 | AT3G61810 | 37.920 | 327 | 190 | 6 | 24 | 346 | 55 | 372 | 7.62e-65 | 214 |
| MS.gene25205.t1 | AT2G19440 | 34.169 | 439 | 259 | 17 | 24 | 446 | 21 | 445 | 4.87e-63 | 213 |
| MS.gene25205.t1 | AT2G19440 | 34.169 | 439 | 259 | 17 | 24 | 446 | 21 | 445 | 4.87e-63 | 213 |
| MS.gene25205.t1 | AT5G20870 | 33.547 | 468 | 272 | 17 | 1 | 446 | 10 | 460 | 2.80e-62 | 211 |
| MS.gene25205.t1 | AT3G24330 | 31.957 | 460 | 283 | 17 | 5 | 446 | 18 | 465 | 4.59e-61 | 208 |
| MS.gene25205.t1 | AT5G18220 | 31.878 | 458 | 279 | 15 | 8 | 446 | 13 | 456 | 9.78e-61 | 207 |
| MS.gene25205.t1 | AT3G04010 | 32.500 | 440 | 266 | 16 | 24 | 446 | 33 | 458 | 3.89e-60 | 206 |
| MS.gene25205.t1 | AT1G64760 | 33.107 | 441 | 261 | 17 | 24 | 446 | 25 | 449 | 1.84e-58 | 201 |
| MS.gene25205.t1 | AT1G64760 | 33.107 | 441 | 261 | 17 | 24 | 446 | 25 | 449 | 1.84e-58 | 201 |
| MS.gene25205.t1 | AT3G57260 | 35.191 | 341 | 206 | 6 | 5 | 345 | 13 | 338 | 7.79e-58 | 195 |
| MS.gene25205.t1 | AT2G26600 | 39.922 | 258 | 150 | 3 | 88 | 343 | 3 | 257 | 9.58e-58 | 193 |
| MS.gene25205.t1 | AT3G57260 | 35.191 | 341 | 206 | 6 | 5 | 345 | 29 | 354 | 1.33e-57 | 195 |
| MS.gene25205.t1 | AT4G17180 | 33.839 | 461 | 253 | 19 | 8 | 445 | 9 | 440 | 1.27e-56 | 196 |
| MS.gene25205.t1 | AT2G27500 | 35.273 | 275 | 174 | 2 | 74 | 347 | 1 | 272 | 4.34e-56 | 190 |
| MS.gene25205.t1 | AT5G64790 | 30.594 | 438 | 276 | 15 | 24 | 446 | 28 | 452 | 2.73e-55 | 192 |
| MS.gene25205.t1 | AT5G58480 | 33.333 | 435 | 261 | 14 | 24 | 445 | 26 | 444 | 4.51e-54 | 189 |
| MS.gene25205.t1 | AT3G46570 | 36.182 | 351 | 210 | 10 | 7 | 352 | 10 | 351 | 1.93e-53 | 184 |
| MS.gene25205.t1 | AT3G57240 | 35.404 | 322 | 192 | 8 | 24 | 345 | 35 | 340 | 3.29e-52 | 180 |
| MS.gene25205.t1 | AT1G77780 | 31.778 | 343 | 223 | 6 | 1 | 343 | 1 | 332 | 3.76e-52 | 181 |
| MS.gene25205.t1 | AT3G55780 | 33.962 | 318 | 201 | 7 | 37 | 351 | 48 | 359 | 3.34e-50 | 176 |
| MS.gene25205.t1 | AT5G20390 | 33.333 | 324 | 199 | 8 | 24 | 343 | 33 | 343 | 4.43e-48 | 169 |
| MS.gene25205.t1 | AT5G20340 | 33.538 | 325 | 197 | 9 | 24 | 343 | 43 | 353 | 1.85e-47 | 168 |
| MS.gene25205.t1 | AT5G20330 | 32.571 | 350 | 211 | 9 | 6 | 343 | 8 | 344 | 3.03e-47 | 167 |
| MS.gene25205.t1 | AT1G33220 | 31.595 | 326 | 202 | 6 | 6 | 321 | 8 | 322 | 6.34e-47 | 166 |
| MS.gene25205.t1 | AT5G20560 | 30.675 | 326 | 204 | 7 | 6 | 321 | 10 | 323 | 4.77e-41 | 150 |
| MS.gene25205.t1 | AT1G77790 | 28.367 | 349 | 229 | 9 | 1 | 343 | 8 | 341 | 9.97e-39 | 144 |
| MS.gene25205.t1 | AT3G58100 | 40.816 | 98 | 58 | 0 | 359 | 456 | 39 | 136 | 1.74e-23 | 97.8 |
| MS.gene25205.t1 | AT4G05430 | 46.316 | 95 | 51 | 0 | 360 | 454 | 22 | 116 | 1.79e-23 | 96.7 |
| MS.gene25205.t1 | AT4G05430 | 48.315 | 89 | 46 | 0 | 360 | 448 | 47 | 135 | 2.83e-23 | 97.1 |
| MS.gene25205.t1 | AT5G35740 | 44.086 | 93 | 51 | 1 | 354 | 445 | 23 | 115 | 4.85e-23 | 94.7 |
| MS.gene25205.t1 | AT3G58100 | 40.816 | 98 | 58 | 0 | 359 | 456 | 115 | 212 | 5.60e-23 | 98.6 |
| MS.gene25205.t1 | AT4G13600 | 43.269 | 104 | 53 | 2 | 361 | 459 | 61 | 163 | 2.33e-22 | 96.3 |
| MS.gene25205.t1 | AT5G67460 | 25.258 | 388 | 227 | 12 | 69 | 445 | 42 | 377 | 3.39e-22 | 98.6 |
| MS.gene25205.t1 | AT2G30933 | 48.315 | 89 | 45 | 1 | 358 | 446 | 79 | 166 | 3.33e-21 | 92.8 |
| MS.gene25205.t1 | AT1G66870 | 42.529 | 87 | 50 | 0 | 359 | 445 | 51 | 137 | 3.48e-21 | 90.1 |
| MS.gene25205.t1 | AT1G66870 | 42.529 | 87 | 50 | 0 | 359 | 445 | 24 | 110 | 4.75e-21 | 88.6 |
| MS.gene25205.t1 | AT4G05430 | 50.000 | 80 | 40 | 0 | 360 | 439 | 47 | 126 | 1.04e-20 | 88.2 |
| MS.gene25205.t1 | AT5G67460 | 25.131 | 382 | 223 | 12 | 69 | 439 | 42 | 371 | 1.70e-20 | 93.6 |
| MS.gene25205.t1 | AT1G29380 | 48.889 | 90 | 45 | 1 | 361 | 450 | 148 | 236 | 1.90e-20 | 91.3 |
| MS.gene25205.t1 | AT2G04910 | 47.059 | 85 | 45 | 0 | 361 | 445 | 15 | 99 | 2.18e-20 | 86.7 |
| MS.gene25205.t1 | AT1G29380 | 49.412 | 85 | 42 | 1 | 361 | 445 | 148 | 231 | 4.80e-20 | 91.3 |
| MS.gene25205.t1 | AT1G66852 | 42.529 | 87 | 49 | 1 | 359 | 445 | 24 | 109 | 4.83e-20 | 85.9 |
| MS.gene25205.t1 | AT5G61130 | 45.977 | 87 | 46 | 1 | 360 | 446 | 20 | 105 | 5.00e-20 | 88.6 |
| MS.gene25205.t1 | AT1G18650 | 42.697 | 89 | 50 | 1 | 360 | 448 | 20 | 107 | 7.39e-20 | 85.9 |
| MS.gene25205.t1 | AT1G09460 | 51.685 | 89 | 40 | 2 | 357 | 445 | 133 | 218 | 8.04e-20 | 90.9 |
| MS.gene25205.t1 | AT1G18650 | 41.304 | 92 | 53 | 1 | 357 | 448 | 17 | 107 | 1.04e-19 | 87.4 |
| MS.gene25205.t1 | AT5G63240 | 42.529 | 87 | 48 | 1 | 361 | 445 | 40 | 126 | 2.31e-18 | 81.6 |
| MS.gene25205.t1 | AT2G30933 | 46.341 | 82 | 43 | 1 | 358 | 439 | 79 | 159 | 5.37e-18 | 81.6 |
| MS.gene25205.t1 | AT2G30933 | 46.341 | 82 | 43 | 1 | 358 | 439 | 79 | 159 | 5.37e-18 | 81.6 |
| MS.gene25205.t1 | AT2G04910 | 45.000 | 80 | 44 | 0 | 361 | 440 | 15 | 94 | 1.07e-17 | 79.7 |
| MS.gene25205.t1 | AT1G29380 | 47.561 | 82 | 42 | 1 | 361 | 442 | 148 | 228 | 1.36e-17 | 82.4 |
| MS.gene25205.t1 | AT1G29380 | 47.561 | 82 | 42 | 1 | 361 | 442 | 148 | 228 | 1.36e-17 | 82.4 |
| MS.gene25205.t1 | AT1G78520 | 36.893 | 103 | 63 | 1 | 343 | 445 | 14 | 114 | 3.40e-17 | 77.8 |
| MS.gene25205.t1 | AT4G16165 | 33.962 | 106 | 67 | 1 | 340 | 445 | 8 | 110 | 4.55e-17 | 77.4 |
| MS.gene25205.t1 | AT2G43670 | 35.165 | 91 | 57 | 1 | 355 | 445 | 29 | 117 | 3.74e-16 | 75.1 |
| MS.gene25205.t1 | AT5G63250 | 39.080 | 87 | 51 | 1 | 361 | 445 | 42 | 128 | 6.91e-16 | 74.7 |
| MS.gene25205.t1 | AT5G63225 | 38.202 | 89 | 54 | 1 | 357 | 445 | 21 | 108 | 1.29e-15 | 73.2 |
| MS.gene25205.t1 | AT1G66855 | 34.483 | 87 | 57 | 0 | 359 | 445 | 24 | 110 | 1.74e-15 | 72.8 |
| MS.gene25205.t1 | AT4G09465 | 34.831 | 89 | 57 | 1 | 357 | 445 | 27 | 114 | 6.69e-15 | 71.6 |
| MS.gene25205.t1 | AT4G09467 | 34.831 | 89 | 57 | 1 | 357 | 445 | 27 | 114 | 8.61e-15 | 71.2 |
| MS.gene25205.t1 | AT4G09464 | 34.831 | 89 | 57 | 1 | 357 | 445 | 27 | 114 | 8.61e-15 | 71.2 |
| MS.gene25205.t1 | AT4G09462 | 30.556 | 108 | 74 | 1 | 338 | 445 | 6 | 112 | 1.02e-14 | 70.9 |
| MS.gene25205.t1 | AT4G09090 | 36.471 | 85 | 53 | 1 | 361 | 445 | 31 | 114 | 1.03e-14 | 70.9 |
| MS.gene25205.t1 | AT5G08000 | 43.333 | 90 | 50 | 1 | 357 | 446 | 17 | 105 | 3.33e-14 | 71.6 |
| MS.gene25205.t1 | AT5G08000 | 36.986 | 146 | 77 | 3 | 352 | 483 | 31 | 175 | 4.06e-14 | 72.0 |
| MS.gene25205.t1 | AT4G09466 | 34.831 | 89 | 57 | 1 | 357 | 445 | 27 | 114 | 4.86e-14 | 68.9 |
| MS.gene25205.t1 | AT2G03505 | 34.343 | 99 | 62 | 2 | 360 | 456 | 20 | 117 | 5.02e-14 | 68.9 |
| MS.gene25205.t1 | AT1G79480 | 38.202 | 89 | 54 | 1 | 357 | 445 | 307 | 394 | 5.79e-14 | 73.9 |
| MS.gene25205.t1 | AT1G79480 | 38.202 | 89 | 54 | 1 | 357 | 445 | 306 | 393 | 6.24e-14 | 73.9 |
| MS.gene25205.t1 | AT2G03505 | 32.979 | 94 | 60 | 2 | 357 | 448 | 17 | 109 | 2.70e-13 | 68.6 |
| MS.gene25205.t1 | AT2G03505 | 32.979 | 94 | 60 | 2 | 357 | 448 | 17 | 109 | 2.70e-13 | 68.6 |
| MS.gene25205.t1 | AT2G03505 | 32.979 | 94 | 60 | 2 | 357 | 448 | 17 | 109 | 2.70e-13 | 68.6 |
| MS.gene25205.t1 | AT2G42930 | 42.500 | 80 | 44 | 2 | 361 | 440 | 40 | 117 | 2.82e-13 | 67.4 |
| MS.gene25205.t1 | AT1G69295 | 38.043 | 92 | 55 | 2 | 351 | 442 | 7 | 96 | 3.33e-12 | 66.2 |
| MS.gene25205.t1 | AT1G69295 | 39.535 | 86 | 50 | 2 | 357 | 442 | 17 | 100 | 4.58e-12 | 66.2 |
| MS.gene25205.t1 | AT5G63230 | 32.584 | 89 | 59 | 1 | 357 | 445 | 22 | 109 | 2.61e-11 | 61.2 |
| MS.gene25205.t1 | AT1G13830 | 37.179 | 78 | 45 | 2 | 361 | 438 | 35 | 108 | 3.28e-11 | 63.5 |
| MS.gene25205.t1 | AT1G13830 | 37.179 | 78 | 45 | 2 | 361 | 438 | 21 | 94 | 5.00e-11 | 62.4 |
| MS.gene25205.t1 | AT5G53600 | 30.000 | 90 | 61 | 1 | 356 | 445 | 24 | 111 | 6.20e-11 | 60.1 |
Find 112 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATCAACAGCTTCCTTATT+TGG | 0.162334 | 1.3:+17102296 | None:intergenic |
| CCTGACTCGGTGACTAAAAT+AGG | 0.167762 | 1.3:+17102185 | None:intergenic |
| CCGTCCCTTGCCGCCAAATA+AGG | 0.274162 | 1.3:-17102309 | MS.gene25205:CDS |
| TTGTAGGTGTTGGCATTATC+AGG | 0.278497 | 1.3:+17102122 | None:intergenic |
| CCAATGCAACTGCCGCGAAT+TGG | 0.283543 | 1.3:-17102697 | MS.gene25205:CDS |
| GCTATCAACTCCACTGATTC+AGG | 0.315340 | 1.3:-17100526 | MS.gene25205:CDS |
| GATTGCATGTAATCATAATA+AGG | 0.334360 | 1.3:+17102365 | None:intergenic |
| ATCTAGAGGGATTACATCAT+TGG | 0.345204 | 1.3:+17102343 | None:intergenic |
| GGAGAACAATCCACCTTTCC+TGG | 0.346483 | 1.3:+17101813 | None:intergenic |
| ATTCCAAGTAGCTCGTTGTT+AGG | 0.363288 | 1.3:+17102728 | None:intergenic |
| ACGAGAACAGGAGCTGCATT+TGG | 0.363577 | 1.3:+17102593 | None:intergenic |
| CTTCTTGCACTTGCCAAGAC+TGG | 0.364119 | 1.3:-17102773 | MS.gene25205:CDS |
| CTTGATTGGGCTTGTGGGCC+AGG | 0.365019 | 1.3:-17101831 | MS.gene25205:CDS |
| ACATTCCTTACTTGGATTTG+TGG | 0.367485 | 1.3:+17101656 | None:intergenic |
| CACGGTTCCTGTATATTTCC+AGG | 0.374026 | 1.3:-17101044 | MS.gene25205:CDS |
| TGATACAGGCAGCACTTGAT+TGG | 0.377908 | 1.3:-17101845 | MS.gene25205:CDS |
| GTCCGGCATCTGAAAGCAAT+TGG | 0.378013 | 1.3:-17101992 | MS.gene25205:CDS |
| CAGCACTTGATTGGGCTTGT+GGG | 0.390346 | 1.3:-17101836 | MS.gene25205:CDS |
| GCAGCACTTGATTGGGCTTG+TGG | 0.398398 | 1.3:-17101837 | MS.gene25205:CDS |
| ACAGTGACTTTAGGTTGTTT+AGG | 0.401362 | 1.3:+17102059 | None:intergenic |
| TCCGGCATCTGAAAGCAATT+GGG | 0.404115 | 1.3:-17101991 | MS.gene25205:CDS |
| CGGCTCGGACGAACCACCTT+TGG | 0.407721 | 1.3:+17102154 | None:intergenic |
| CCAATTCGCGGCAGTTGCAT+TGG | 0.413327 | 1.3:+17102697 | None:intergenic |
| CAATGCAACTGCCGCGAATT+GGG | 0.413704 | 1.3:-17102696 | MS.gene25205:CDS |
| CTCGGACGAACCACCTTTGG+AGG | 0.415693 | 1.3:+17102157 | None:intergenic |
| GAATTGATATCATACCTTCC+TGG | 0.418808 | 1.3:+17101026 | None:intergenic |
| AAGTGCTGTGCCGTTTATCT+TGG | 0.419890 | 1.3:+17100555 | None:intergenic |
| ACCTTACACTTGACCGGTGC+TGG | 0.421328 | 1.3:-17101936 | MS.gene25205:CDS |
| AATTACTTGGATTCCAGTCT+TGG | 0.422533 | 1.3:+17102760 | None:intergenic |
| TCTTAGCGACACAAAACGTT+TGG | 0.425096 | 1.3:+17101886 | None:intergenic |
| CTGACTCGGTGACTAAAATA+GGG | 0.425659 | 1.3:+17102186 | None:intergenic |
| CAGAAGATGGATAAATCTCC+TGG | 0.425719 | 1.3:-17101714 | MS.gene25205:CDS |
| CCCCAATTGCTTTCAGATGC+CGG | 0.430251 | 1.3:+17101990 | None:intergenic |
| GCCACGGTTTCTGTTGGACT+TGG | 0.430365 | 1.3:+17102854 | None:intergenic |
| CGAGAACAGGAGCTGCATTT+GGG | 0.438661 | 1.3:+17102594 | None:intergenic |
| GTTCCTAACAACGAGCTACT+TGG | 0.446287 | 1.3:-17102731 | MS.gene25205:CDS |
| TGGCCAACCGTGTTCTGAAC+CGG | 0.451498 | 1.3:-17101781 | MS.gene25205:CDS |
| GATTGTTCTCCTTTGTTGCA+TGG | 0.453373 | 1.3:-17101801 | MS.gene25205:CDS |
| TGCAAGAAGCATGGATTTGT+CGG | 0.455001 | 1.3:+17102787 | None:intergenic |
| GCATGTGCAACTACATTATC+CGG | 0.464933 | 1.3:+17101762 | None:intergenic |
| GATACAGGCAGCACTTGATT+GGG | 0.465171 | 1.3:-17101844 | MS.gene25205:CDS |
| TGGGAAAGAGTCGAGTATGA+TGG | 0.470753 | 1.3:+17102487 | None:intergenic |
| GAATCAGTGGAGTTGATAGC+AGG | 0.470964 | 1.3:+17100529 | None:intergenic |
| CCGAATGAGATTACTGTTGT+AGG | 0.474772 | 1.3:+17102106 | None:intergenic |
| AGAAGGGCCACGGTTTCTGT+TGG | 0.476649 | 1.3:+17102848 | None:intergenic |
| TAATGCTTATTATCAGAAGA+TGG | 0.479937 | 1.3:-17101727 | MS.gene25205:CDS |
| TTTCAATCGAACTTGGGATC+CGG | 0.485550 | 1.3:-17102450 | MS.gene25205:CDS |
| AGTATGATGGAAGTAGAAAG+TGG | 0.486263 | 1.3:+17102500 | None:intergenic |
| GTCAAGTGTAAGGTATAAAC+CGG | 0.487112 | 1.3:+17101945 | None:intergenic |
| TACGTACTAACAGTGACTTT+AGG | 0.488181 | 1.3:+17102050 | None:intergenic |
| TTGGGCTTGTGGGCCAGGAA+AGG | 0.489444 | 1.3:-17101826 | MS.gene25205:CDS |
| TAGGAACAGAGACAATTACT+TGG | 0.492995 | 1.3:+17102747 | None:intergenic |
| TCAACAGCTTCCTTATTTGG+CGG | 0.494181 | 1.3:+17102299 | None:intergenic |
| ATACCTTCCTGGAAATATAC+AGG | 0.498642 | 1.3:+17101037 | None:intergenic |
| GGCTTGTGGGCCAGGAAAGG+TGG | 0.503432 | 1.3:-17101823 | MS.gene25205:CDS |
| ACCAGCACCGGTCAAGTGTA+AGG | 0.504854 | 1.3:+17101935 | None:intergenic |
| AGCTTCCTTATTTGGCGGCA+AGG | 0.507938 | 1.3:+17102304 | None:intergenic |
| TGCTGATAGTAAGATGATAC+AGG | 0.508115 | 1.3:-17101859 | MS.gene25205:CDS |
| TATAACGAAGACTTGAGATC+AGG | 0.508228 | 1.3:-17102014 | MS.gene25205:CDS |
| GCATTATCAGGAGTTGCGTC+CGG | 0.508802 | 1.3:+17102134 | None:intergenic |
| GTTTATACCTTACACTTGAC+CGG | 0.508894 | 1.3:-17101942 | MS.gene25205:CDS |
| ATGGCAGTAATGTTGGTTGA+AGG | 0.510808 | 1.3:+17102647 | None:intergenic |
| CCTTATTTGGCGGCAAGGGA+CGG | 0.514371 | 1.3:+17102309 | None:intergenic |
| CGGAATAGAGCATAATCTAG+AGG | 0.515329 | 1.3:+17102329 | None:intergenic |
| AACAACGAGCTACTTGGAAT+CGG | 0.520085 | 1.3:-17102725 | MS.gene25205:CDS |
| CGAAGACTTGAGATCAGGTC+CGG | 0.520815 | 1.3:-17102009 | MS.gene25205:CDS |
| CAAAGGTGGTTCGTCCGAGC+CGG | 0.522183 | 1.3:-17102153 | MS.gene25205:CDS |
| ATCAGGAGTTGCGTCCGGCT+CGG | 0.523091 | 1.3:+17102139 | None:intergenic |
| GCTTCCTTATTTGGCGGCAA+GGG | 0.525140 | 1.3:+17102305 | None:intergenic |
| CCTACAACAGTAATCTCATT+CGG | 0.529782 | 1.3:-17102106 | MS.gene25205:CDS |
| TGGGAGTGATGTTAAGACTT+CGG | 0.531927 | 1.3:+17102613 | None:intergenic |
| AAGAGAGGGATATTGAAAGA+AGG | 0.539746 | 1.3:+17104959 | None:intergenic |
| CACGGTTGGCCATGCAACAA+AGG | 0.540609 | 1.3:+17101792 | None:intergenic |
| TTCTGTTGGACTTGGCATGT+TGG | 0.542671 | 1.3:+17102862 | None:intergenic |
| TGTAGCGCAGATACGAGAAC+AGG | 0.543313 | 1.3:+17102581 | None:intergenic |
| AGAAACCGTGGCCCTTCTCA+AGG | 0.545874 | 1.3:-17102843 | MS.gene25205:CDS |
| TAGTGCAAGAATCATATAGC+TGG | 0.546028 | 1.3:+17100468 | None:intergenic |
| TTAAGTAAAGGTGACATGAC+CGG | 0.552531 | 1.3:+17102431 | None:intergenic |
| CGTCAAAGAGTCTCACATGT+TGG | 0.559706 | 1.3:+17102810 | None:intergenic |
| GAGATTACTGTTGTAGGTGT+TGG | 0.559723 | 1.3:+17102112 | None:intergenic |
| TTGAGCCTTGAGAAGGGCCA+CGG | 0.560237 | 1.3:+17102838 | None:intergenic |
| GACAGCTATGGCAGTAATGT+TGG | 0.560252 | 1.3:+17102640 | None:intergenic |
| CCGGCATCTGAAAGCAATTG+GGG | 0.560288 | 1.3:-17101990 | MS.gene25205:CDS |
| CTTGGCAAGTGCAAGAAGCA+TGG | 0.563554 | 1.3:+17102778 | None:intergenic |
| TGCAAATACAGTACCAGCAC+CGG | 0.565949 | 1.3:+17101923 | None:intergenic |
| TTTGGAGGGCCATCCTGACT+CGG | 0.571401 | 1.3:+17102172 | None:intergenic |
| TGGCAGTAATGTTGGTTGAA+GGG | 0.577621 | 1.3:+17102648 | None:intergenic |
| CCTGGGAGTTGTGATTTCAA+AGG | 0.579529 | 1.3:-17101696 | MS.gene25205:CDS |
| TATCCGGTTCAGAACACGGT+TGG | 0.583788 | 1.3:+17101778 | None:intergenic |
| ATTACGAGCAACCCAATTCG+CGG | 0.586868 | 1.3:+17102685 | None:intergenic |
| GACTTCGGAACCGACAGCTA+TGG | 0.591858 | 1.3:+17102628 | None:intergenic |
| TGAAGAAGAGCCTGAATCAG+TGG | 0.595089 | 1.3:+17100516 | None:intergenic |
| GTTCCTGTATATTTCCAGGA+AGG | 0.604835 | 1.3:-17101040 | MS.gene25205:intron |
| TCGGACGAACCACCTTTGGA+GGG | 0.606238 | 1.3:+17102158 | None:intergenic |
| ACATTATCCGGTTCAGAACA+CGG | 0.606649 | 1.3:+17101774 | None:intergenic |
| TCAGGATGGCCCTCCAAAGG+TGG | 0.607905 | 1.3:-17102167 | MS.gene25205:CDS |
| AACATTACTGCCATAGCTGT+CGG | 0.608612 | 1.3:-17102638 | MS.gene25205:CDS |
| GAGTCAGGATGGCCCTCCAA+AGG | 0.612295 | 1.3:-17102170 | MS.gene25205:CDS |
| TCTTCACAATACTACAATGG+TGG | 0.617627 | 1.3:-17100499 | MS.gene25205:CDS |
| TTCCTTACTTGGATTTGTGG+TGG | 0.620716 | 1.3:+17101659 | None:intergenic |
| GTTACCTCCATGAAAAGAGA+GGG | 0.621480 | 1.3:+17104945 | None:intergenic |
| AATCAGTGGAGTTGATAGCA+GGG | 0.627452 | 1.3:+17100530 | None:intergenic |
| AGTTACCTCCATGAAAAGAG+AGG | 0.627596 | 1.3:+17104944 | None:intergenic |
| CCTTTGAAATCACAACTCCC+AGG | 0.628585 | 1.3:+17101696 | None:intergenic |
| GGAATAGAGCATAATCTAGA+GGG | 0.633653 | 1.3:+17102330 | None:intergenic |
| AGAAGATGGATAAATCTCCT+GGG | 0.636620 | 1.3:-17101713 | MS.gene25205:CDS |
| GCTTATATAGGTGTCAACAT+TGG | 0.644641 | 1.3:-17102896 | MS.gene25205:CDS |
| TCTTCTTCACAATACTACAA+TGG | 0.644820 | 1.3:-17100502 | MS.gene25205:CDS |
| ATCAGTGGAGTTGATAGCAG+GGG | 0.657358 | 1.3:+17100531 | None:intergenic |
| GCCAAGTCCAACAGAAACCG+TGG | 0.663969 | 1.3:-17102855 | MS.gene25205:CDS |
| TGGATTTGTGGTGGTGACAG+AGG | 0.664862 | 1.3:+17101668 | None:intergenic |
| CGGCATCTGAAAGCAATTGG+GGG | 0.713939 | 1.3:-17101989 | MS.gene25205:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATTTTTTATTTTCCT+TGG | - | chr1.3:17100713-17100732 | MS.gene25205:intron | 10.0% |
| !! | AAAAAATGATGAATATGTTA+AGG | - | chr1.3:17100607-17100626 | MS.gene25205:intron | 15.0% |
| !! | AAAAATGATGAATATGTTAA+GGG | - | chr1.3:17100608-17100627 | MS.gene25205:intron | 15.0% |
| !! | ATAATTTATAATAATGCCAA+AGG | + | chr1.3:17101419-17101438 | None:intergenic | 15.0% |
| !! | ATAATTTATCTCTTCATTAA+CGG | + | chr1.3:17101523-17101542 | None:intergenic | 15.0% |
| !! | CTTATGTATAAGAAATTATA+TGG | - | chr1.3:17102245-17102264 | MS.gene25205:CDS | 15.0% |
| !!! | AAAAGTAACAACAAATTTTA+TGG | + | chr1.3:17104223-17104242 | None:intergenic | 15.0% |
| !!! | TATTTTCATAAGTTGTTATA+TGG | + | chr1.3:17102168-17102187 | None:intergenic | 15.0% |
| !!! | TTGTAATTTTGAAACATTTA+AGG | + | chr1.3:17104630-17104649 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTACATCTTTG+TGG | - | chr1.3:17104827-17104846 | MS.gene25205:intron | 15.0% |
| !! | AAAGTGGAATATATTGTATT+GGG | - | chr1.3:17100837-17100856 | MS.gene25205:intron | 20.0% |
| !! | AATCGAATTATTATCAGTAT+CGG | + | chr1.3:17103975-17103994 | None:intergenic | 20.0% |
| !! | ACCATAATAATAATAACAAC+TGG | + | chr1.3:17101341-17101360 | None:intergenic | 20.0% |
| !! | AGTTGTATTGAAAATTGAAA+TGG | - | chr1.3:17100910-17100929 | MS.gene25205:intron | 20.0% |
| !! | ATGAAACAGAGAAATAAATA+TGG | + | chr1.3:17100534-17100553 | None:intergenic | 20.0% |
| !! | GTTGTATTGAAAATTGAAAT+GGG | - | chr1.3:17100911-17100930 | MS.gene25205:intron | 20.0% |
| !! | GTTGTTAATAATTGCTAAAA+TGG | + | chr1.3:17104186-17104205 | None:intergenic | 20.0% |
| !! | TCTTTGATTAAAATTCACAT+GGG | - | chr1.3:17101863-17101882 | MS.gene25205:CDS | 20.0% |
| !!! | ACCAGTTGTTATTATTATTA+TGG | - | chr1.3:17101337-17101356 | MS.gene25205:intron | 20.0% |
| !!! | AGAAAAGTGTATAAATAAAG+AGG | - | chr1.3:17100814-17100833 | MS.gene25205:intron | 20.0% |
| !!! | ATATTCCATTAGAACATTTT+TGG | - | chr1.3:17103846-17103865 | MS.gene25205:intron | 20.0% |
| !!! | ATTTTGATACGTGTTATTAA+TGG | - | chr1.3:17101692-17101711 | MS.gene25205:CDS | 20.0% |
| !!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr1.3:17100947-17100966 | MS.gene25205:intron | 20.0% |
| !!! | TGATTTGTTAAAATTCACAT+GGG | + | chr1.3:17101929-17101948 | None:intergenic | 20.0% |
| !!! | TTGATTTGTTAAAATTCACA+TGG | + | chr1.3:17101930-17101949 | None:intergenic | 20.0% |
| !!! | TTGTATTCTTATCATTTTAC+AGG | - | chr1.3:17104361-17104380 | MS.gene25205:intron | 20.0% |
| ! | AACCATAACTGAAGATATAA+TGG | - | chr1.3:17103869-17103888 | MS.gene25205:intron | 25.0% |
| ! | AATGAGTTCTTAAGTTCTTA+TGG | + | chr1.3:17102283-17102302 | None:intergenic | 25.0% |
| ! | ACTACTTACTTTGTTCTTTA+GGG | + | chr1.3:17101792-17101811 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTAATTTAC+TGG | - | chr1.3:17102063-17102082 | MS.gene25205:CDS | 25.0% |
| ! | ATCTCACTAAAAAAAATGCA+AGG | + | chr1.3:17101033-17101052 | None:intergenic | 25.0% |
| ! | ATTAACAACAATAGCTAAAG+TGG | - | chr1.3:17104197-17104216 | MS.gene25205:intron | 25.0% |
| ! | CAAAATTACAAAAACATACC+TGG | - | chr1.3:17104639-17104658 | MS.gene25205:intron | 25.0% |
| ! | CTCTTTGATTAAAATTCACA+TGG | - | chr1.3:17101862-17101881 | MS.gene25205:CDS | 25.0% |
| ! | GAAAGTGGAATATATTGTAT+TGG | - | chr1.3:17100836-17100855 | MS.gene25205:intron | 25.0% |
| ! | GACTGCAAAAATTTAAGTAA+AGG | + | chr1.3:17103013-17103032 | None:intergenic | 25.0% |
| ! | GATTGCATGTAATCATAATA+AGG | + | chr1.3:17103067-17103086 | None:intergenic | 25.0% |
| ! | GTTGCCAAATAAAATCAATT+GGG | - | chr1.3:17101164-17101183 | MS.gene25205:intron | 25.0% |
| ! | TAATGCTTATTATCAGAAGA+TGG | - | chr1.3:17103702-17103721 | MS.gene25205:intron | 25.0% |
| ! | TACCATTATATCTTCAGTTA+TGG | + | chr1.3:17103874-17103893 | None:intergenic | 25.0% |
| ! | TACTACTTACTTTGTTCTTT+AGG | + | chr1.3:17101793-17101812 | None:intergenic | 25.0% |
| ! | TGTATAAATAAAGAGGAAAG+TGG | - | chr1.3:17100821-17100840 | MS.gene25205:intron | 25.0% |
| ! | TGTTGCCAAATAAAATCAAT+TGG | - | chr1.3:17101163-17101182 | MS.gene25205:intron | 25.0% |
| ! | TTTCTTATTCTTAGTGAGTT+TGG | - | chr1.3:17104670-17104689 | MS.gene25205:intron | 25.0% |
| !! | CTTGATGTCAAATTATTTTC+TGG | - | chr1.3:17104447-17104466 | MS.gene25205:intron | 25.0% |
| !! | TTGAAAATGACATAGCTTTA+GGG | + | chr1.3:17101382-17101401 | None:intergenic | 25.0% |
| !!! | GAGTTTTGTTTTATAGGTAT+TGG | + | chr1.3:17101608-17101627 | None:intergenic | 25.0% |
| !!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr1.3:17100946-17100965 | MS.gene25205:intron | 25.0% |
| !!! | TATTTTCTGGTTTAATGTAC+TGG | - | chr1.3:17104460-17104479 | MS.gene25205:intron | 25.0% |
| !!! | TTTCACGAGTTTTGTTTTAT+AGG | + | chr1.3:17101614-17101633 | None:intergenic | 25.0% |
| AAAAGAAATATCTGATGAGC+TGG | + | chr1.3:17101075-17101094 | None:intergenic | 30.0% | |
| AAAGAAATATCTGATGAGCT+GGG | + | chr1.3:17101074-17101093 | None:intergenic | 30.0% | |
| AAGATGAACAATTTGACCTT+TGG | - | chr1.3:17101400-17101419 | MS.gene25205:intron | 30.0% | |
| AATCTAGGAAAAAAGATGGT+AGG | - | chr1.3:17101654-17101673 | MS.gene25205:intron | 30.0% | |
| AGAGGATCTATGAAACAAAA+TGG | + | chr1.3:17101468-17101487 | None:intergenic | 30.0% | |
| AGTACAAAAGGAATGCATAT+GGG | - | chr1.3:17101255-17101274 | MS.gene25205:intron | 30.0% | |
| ATACGTTAACATTCCTTACT+TGG | + | chr1.3:17103784-17103803 | None:intergenic | 30.0% | |
| ATAGGAAATGGAGAACATTT+AGG | + | chr1.3:17102384-17102403 | None:intergenic | 30.0% | |
| ATATCCCAAGATAGTACAAA+AGG | - | chr1.3:17101243-17101262 | MS.gene25205:intron | 30.0% | |
| ATGAACCATGACAAAAATCA+AGG | + | chr1.3:17101297-17101316 | None:intergenic | 30.0% | |
| ATGAGATGAGAATTGAAAAG+GGG | + | chr1.3:17104521-17104540 | None:intergenic | 30.0% | |
| ATGCAGGTTCCATATAAATT+TGG | - | chr1.3:17101898-17101917 | MS.gene25205:CDS | 30.0% | |
| CAAATTAGGTCAATTATACC+GGG | + | chr1.3:17100777-17100796 | None:intergenic | 30.0% | |
| CCAAATTAGGTCAATTATAC+CGG | + | chr1.3:17100778-17100797 | None:intergenic | 30.0% | |
| CTAGTATATTAGGCAAATGA+GGG | + | chr1.3:17104493-17104512 | None:intergenic | 30.0% | |
| CTTGAAAATGACATAGCTTT+AGG | + | chr1.3:17101383-17101402 | None:intergenic | 30.0% | |
| GATGAGATGAGAATTGAAAA+GGG | + | chr1.3:17104522-17104541 | None:intergenic | 30.0% | |
| GGATTATGTATTGTAGTTAC+AGG | + | chr1.3:17101745-17101764 | None:intergenic | 30.0% | |
| GTCATTCTTCGATTTATAAC+AGG | + | chr1.3:17104282-17104301 | None:intergenic | 30.0% | |
| TAATACTTGTGAGACTGATT+GGG | - | chr1.3:17102089-17102108 | MS.gene25205:CDS | 30.0% | |
| TAGTACAAAAGGAATGCATA+TGG | - | chr1.3:17101254-17101273 | MS.gene25205:intron | 30.0% | |
| TCTAGTATATTAGGCAAATG+AGG | + | chr1.3:17104494-17104513 | None:intergenic | 30.0% | |
| TCTGTGTGAAAAACCAAATT+AGG | + | chr1.3:17100791-17100810 | None:intergenic | 30.0% | |
| TCTTCTTCACAATACTACAA+TGG | - | chr1.3:17104927-17104946 | MS.gene25205:intron | 30.0% | |
| TGATGAGATGAGAATTGAAA+AGG | + | chr1.3:17104523-17104542 | None:intergenic | 30.0% | |
| TGGTTCCAAAAATGTTCTAA+TGG | + | chr1.3:17103854-17103873 | None:intergenic | 30.0% | |
| TTAATACTTGTGAGACTGAT+TGG | - | chr1.3:17102088-17102107 | MS.gene25205:CDS | 30.0% | |
| ! | ACTAACCTTGATTTTTGTCA+TGG | - | chr1.3:17101289-17101308 | MS.gene25205:intron | 30.0% |
| ! | CATTCCTTTTGTACTATCTT+GGG | + | chr1.3:17101250-17101269 | None:intergenic | 30.0% |
| ! | TCATCAGCATCATATTTTCA+GGG | - | chr1.3:17102462-17102481 | MS.gene25205:CDS | 30.0% |
| ! | TCTTATCATTTTACAGGTCA+CGG | - | chr1.3:17104367-17104386 | MS.gene25205:intron | 30.0% |
| ! | TGTCGAGTAAACATTCATTT+TGG | - | chr1.3:17104566-17104585 | MS.gene25205:intron | 30.0% |
| ! | TTCATCAGCATCATATTTTC+AGG | - | chr1.3:17102461-17102480 | MS.gene25205:CDS | 30.0% |
| ! | TTGAAATGGGTCAGTTATTT+TGG | - | chr1.3:17100924-17100943 | MS.gene25205:intron | 30.0% |
| ! | TTTAATCAAAGAGAGTGTGT+TGG | + | chr1.3:17101855-17101874 | None:intergenic | 30.0% |
| ! | TTTTCTGCAGATGCTTATAT+AGG | - | chr1.3:17102521-17102540 | MS.gene25205:CDS | 30.0% |
| ! | TTTTGTACTATCTTGGGATA+TGG | + | chr1.3:17101244-17101263 | None:intergenic | 30.0% |
| !! | GGTACCCAATTGATTTTATT+TGG | + | chr1.3:17101171-17101190 | None:intergenic | 30.0% |
| !! | TGAAAATGACATAGCTTTAG+GGG | + | chr1.3:17101381-17101400 | None:intergenic | 30.0% |
| !! | TGAAATGGGTCAGTTATTTT+GGG | - | chr1.3:17100925-17100944 | MS.gene25205:intron | 30.0% |
| AAAAACGGCACCAAGATAAA+CGG | - | chr1.3:17104864-17104883 | MS.gene25205:intron | 35.0% | |
| AAATCAATTGGGTACCAAAC+TGG | - | chr1.3:17101175-17101194 | MS.gene25205:intron | 35.0% | |
| AAGAGAGGGATATTGAAAGA+AGG | + | chr1.3:17100473-17100492 | None:intergenic | 35.0% | |
| AATCAATTGGGTACCAAACT+GGG | - | chr1.3:17101176-17101195 | MS.gene25205:intron | 35.0% | |
| AATTACTTGGATTCCAGTCT+TGG | + | chr1.3:17102672-17102691 | None:intergenic | 35.0% | |
| ACAAAGTAAGTAGTAGCAAG+AGG | - | chr1.3:17101798-17101817 | MS.gene25205:CDS | 35.0% | |
| ACATTCCTTACTTGGATTTG+TGG | + | chr1.3:17103776-17103795 | None:intergenic | 35.0% | |
| ACTAACGAAAGACACATTCA+AGG | + | chr1.3:17104697-17104716 | None:intergenic | 35.0% | |
| AGAAAATGGGTCAGTTATTC+CGG | - | chr1.3:17100960-17100979 | MS.gene25205:intron | 35.0% | |
| AGAAGATGGATAAATCTCCT+GGG | - | chr1.3:17103716-17103735 | MS.gene25205:intron | 35.0% | |
| AGCAATCATGCAAGACAAAT+AGG | + | chr1.3:17102402-17102421 | None:intergenic | 35.0% | |
| AGGTTCCATATAAATTTGGC+GGG | - | chr1.3:17101902-17101921 | MS.gene25205:CDS | 35.0% | |
| ATACCTTCCTGGAAATATAC+AGG | + | chr1.3:17104395-17104414 | None:intergenic | 35.0% | |
| ATCTAGAGGGATTACATCAT+TGG | + | chr1.3:17103089-17103108 | None:intergenic | 35.0% | |
| ATGACTAAAATACCCTTGTG+CGG | - | chr1.3:17101137-17101156 | MS.gene25205:intron | 35.0% | |
| CAGGTTCCATATAAATTTGG+CGG | - | chr1.3:17101901-17101920 | MS.gene25205:CDS | 35.0% | |
| CATGCAAGACAAATAGGAAA+TGG | + | chr1.3:17102396-17102415 | None:intergenic | 35.0% | |
| CCGGTATAATTGACCTAATT+TGG | - | chr1.3:17100775-17100794 | MS.gene25205:intron | 35.0% | |
| CCTACAACAGTAATCTCATT+CGG | - | chr1.3:17103323-17103342 | MS.gene25205:intron | 35.0% | |
| CGCTAATCTAGGAAAAAAGA+TGG | - | chr1.3:17101650-17101669 | MS.gene25205:intron | 35.0% | |
| CTACAATACATAATCCTCTG+TGG | - | chr1.3:17101749-17101768 | MS.gene25205:CDS | 35.0% | |
| CTATCAACAGCTTCCTTATT+TGG | + | chr1.3:17103136-17103155 | None:intergenic | 35.0% | |
| GAATTGATATCATACCTTCC+TGG | + | chr1.3:17104406-17104425 | None:intergenic | 35.0% | |
| GCTTATATAGGTGTCAACAT+TGG | - | chr1.3:17102533-17102552 | MS.gene25205:CDS | 35.0% | |
| GGAATAGAGCATAATCTAGA+GGG | + | chr1.3:17103102-17103121 | None:intergenic | 35.0% | |
| GTCAAGTGTAAGGTATAAAC+CGG | + | chr1.3:17103487-17103506 | None:intergenic | 35.0% | |
| GTTTATACCTTACACTTGAC+CGG | - | chr1.3:17103487-17103506 | MS.gene25205:intron | 35.0% | |
| TACGTACTAACAGTGACTTT+AGG | + | chr1.3:17103382-17103401 | None:intergenic | 35.0% | |
| TAGGAACAGAGACAATTACT+TGG | + | chr1.3:17102685-17102704 | None:intergenic | 35.0% | |
| TAGTAGCAATGTAAACCACA+AGG | - | chr1.3:17102002-17102021 | MS.gene25205:CDS | 35.0% | |
| TAGTGCAAGAATCATATAGC+TGG | + | chr1.3:17104964-17104983 | None:intergenic | 35.0% | |
| TATAACGAAGACTTGAGATC+AGG | - | chr1.3:17103415-17103434 | MS.gene25205:intron | 35.0% | |
| TCTTCACAATACTACAATGG+TGG | - | chr1.3:17104930-17104949 | MS.gene25205:intron | 35.0% | |
| TGAAACAAAATGGCTCCTAT+TGG | + | chr1.3:17101458-17101477 | None:intergenic | 35.0% | |
| TGCTGATAGTAAGATGATAC+AGG | - | chr1.3:17103570-17103589 | MS.gene25205:intron | 35.0% | |
| TGTCAAATGCACTATAAAGC+TGG | + | chr1.3:17101495-17101514 | None:intergenic | 35.0% | |
| TTAAGTAAAGGTGACATGAC+CGG | + | chr1.3:17103001-17103020 | None:intergenic | 35.0% | |
| TTACTTGTGTAGTTGTGTGA+GGG | + | chr1.3:17103918-17103937 | None:intergenic | 35.0% | |
| TTTACTTGTGTAGTTGTGTG+AGG | + | chr1.3:17103919-17103938 | None:intergenic | 35.0% | |
| ! | AGTATGATGGAAGTAGAAAG+TGG | + | chr1.3:17102932-17102951 | None:intergenic | 35.0% |
| ! | ATTTTCCTTGGCTAAAGAGA+GGG | - | chr1.3:17100725-17100744 | MS.gene25205:intron | 35.0% |
| ! | CTTAAATTTTTGCAGTCGAC+TGG | - | chr1.3:17103016-17103035 | MS.gene25205:intron | 35.0% |
| ! | GCATTCCTTTTGTACTATCT+TGG | + | chr1.3:17101251-17101270 | None:intergenic | 35.0% |
| ! | TATTTTCCTTGGCTAAAGAG+AGG | - | chr1.3:17100724-17100743 | MS.gene25205:intron | 35.0% |
| ! | TCAATATCCCTCTCTTTTCA+TGG | - | chr1.3:17100477-17100496 | MS.gene25205:CDS | 35.0% |
| !! | AAGCGTTTTTCAATCGAACT+TGG | - | chr1.3:17102972-17102991 | MS.gene25205:intron | 35.0% |
| !! | ACAGTGACTTTAGGTTGTTT+AGG | + | chr1.3:17103373-17103392 | None:intergenic | 35.0% |
| !! | AGCGTTTTTCAATCGAACTT+GGG | - | chr1.3:17102973-17102992 | MS.gene25205:intron | 35.0% |
| !! | AGGGGCATTTCTAGTATATT+AGG | + | chr1.3:17104503-17104522 | None:intergenic | 35.0% |
| !! | GGCATGTTTTGAACAATACT+GGG | - | chr1.3:17103344-17103363 | MS.gene25205:intron | 35.0% |
| AACAACGAGCTACTTGGAAT+CGG | - | chr1.3:17102704-17102723 | MS.gene25205:CDS | 40.0% | |
| AACATTACTGCCATAGCTGT+CGG | - | chr1.3:17102791-17102810 | MS.gene25205:CDS | 40.0% | |
| ACATTATCCGGTTCAGAACA+CGG | + | chr1.3:17103658-17103677 | None:intergenic | 40.0% | |
| AGAAAATGCCACATGACATC+TGG | + | chr1.3:17104077-17104096 | None:intergenic | 40.0% | |
| AGGAATGCATATGGGATGAT+AGG | - | chr1.3:17101263-17101282 | MS.gene25205:intron | 40.0% | |
| AGTTACCTCCATGAAAAGAG+AGG | + | chr1.3:17100488-17100507 | None:intergenic | 40.0% | |
| ATAAACCCTCTCTTTAGCCA+AGG | + | chr1.3:17100733-17100752 | None:intergenic | 40.0% | |
| ATATTCAGTACCCTGCCAAT+AGG | - | chr1.3:17101440-17101459 | MS.gene25205:intron | 40.0% | |
| ATTCAGAACATTGCCCAGTT+TGG | + | chr1.3:17101192-17101211 | None:intergenic | 40.0% | |
| ATTCCAAGTAGCTCGTTGTT+AGG | + | chr1.3:17102704-17102723 | None:intergenic | 40.0% | |
| CAGAAGATGGATAAATCTCC+TGG | - | chr1.3:17103715-17103734 | MS.gene25205:intron | 40.0% | |
| CCGAATGAGATTACTGTTGT+AGG | + | chr1.3:17103326-17103345 | None:intergenic | 40.0% | |
| CGATTGAAAAACGCTTGAGA+AGG | + | chr1.3:17102968-17102987 | None:intergenic | 40.0% | |
| CGGAATAGAGCATAATCTAG+AGG | + | chr1.3:17103103-17103122 | None:intergenic | 40.0% | |
| CTGTATCAGCATTGTCATCA+TGG | + | chr1.3:17100676-17100695 | None:intergenic | 40.0% | |
| GAAAATGGGTCAGTTATTCC+GGG | - | chr1.3:17100961-17100980 | MS.gene25205:intron | 40.0% | |
| GAACGTAGCTACATGTGTTA+GGG | - | chr1.3:17104008-17104027 | MS.gene25205:intron | 40.0% | |
| GAATAAGAAAAGACACGTCC+AGG | + | chr1.3:17104660-17104679 | None:intergenic | 40.0% | |
| GAGATTACTGTTGTAGGTGT+TGG | + | chr1.3:17103320-17103339 | None:intergenic | 40.0% | |
| GATTGTTCTCCTTTGTTGCA+TGG | - | chr1.3:17103628-17103647 | MS.gene25205:intron | 40.0% | |
| GCATGTGCAACTACATTATC+CGG | + | chr1.3:17103670-17103689 | None:intergenic | 40.0% | |
| GTTACCTCCATGAAAAGAGA+GGG | + | chr1.3:17100487-17100506 | None:intergenic | 40.0% | |
| GTTCCTGTATATTTCCAGGA+AGG | - | chr1.3:17104389-17104408 | MS.gene25205:intron | 40.0% | |
| TCTTAGCGACACAAAACGTT+TGG | + | chr1.3:17103546-17103565 | None:intergenic | 40.0% | |
| TGAAAAACGCTTGAGAAGGT+GGG | + | chr1.3:17102964-17102983 | None:intergenic | 40.0% | |
| TGAACGTAGCTACATGTGTT+AGG | - | chr1.3:17104007-17104026 | MS.gene25205:intron | 40.0% | |
| TGACTAAAATACCCTTGTGC+GGG | - | chr1.3:17101138-17101157 | MS.gene25205:intron | 40.0% | |
| TGAGAAATCATTCACCACAG+AGG | + | chr1.3:17101766-17101785 | None:intergenic | 40.0% | |
| TGGGAGTGATGTTAAGACTT+CGG | + | chr1.3:17102819-17102838 | None:intergenic | 40.0% | |
| TTAGGTCAATTATACCGGGA+CGG | + | chr1.3:17100773-17100792 | None:intergenic | 40.0% | |
| TTCCTTACTTGGATTTGTGG+TGG | + | chr1.3:17103773-17103792 | None:intergenic | 40.0% | |
| TTGAAAAACGCTTGAGAAGG+TGG | + | chr1.3:17102965-17102984 | None:intergenic | 40.0% | |
| TTTCAATCGAACTTGGGATC+CGG | - | chr1.3:17102979-17102998 | MS.gene25205:intron | 40.0% | |
| ! | ATATCCCTCTCTTTTCATGG+AGG | - | chr1.3:17100480-17100499 | MS.gene25205:CDS | 40.0% |
| ! | ATGGCAGTAATGTTGGTTGA+AGG | + | chr1.3:17102785-17102804 | None:intergenic | 40.0% |
| ! | TCAACAGCTTCCTTATTTGG+CGG | + | chr1.3:17103133-17103152 | None:intergenic | 40.0% |
| ! | TCTTGTTGTAGCAACTAGCA+AGG | + | chr1.3:17100653-17100672 | None:intergenic | 40.0% |
| ! | TGCAAGAAGCATGGATTTGT+CGG | + | chr1.3:17102645-17102664 | None:intergenic | 40.0% |
| ! | TGGCAGTAATGTTGGTTGAA+GGG | + | chr1.3:17102784-17102803 | None:intergenic | 40.0% |
| !! | AATCAGTGGAGTTGATAGCA+GGG | + | chr1.3:17104902-17104921 | None:intergenic | 40.0% |
| !! | CGGCATGTTTTGAACAATAC+TGG | - | chr1.3:17103343-17103362 | MS.gene25205:intron | 40.0% |
| !! | CTGACTCGGTGACTAAAATA+GGG | + | chr1.3:17103246-17103265 | None:intergenic | 40.0% |
| !! | GATGTTTTGAGCCTTGAGAA+GGG | + | chr1.3:17102600-17102619 | None:intergenic | 40.0% |
| !! | TTGTAGGTGTTGGCATTATC+AGG | + | chr1.3:17103310-17103329 | None:intergenic | 40.0% |
| !!! | TGTTTTATAGGTATTGGCCC+AGG | + | chr1.3:17101602-17101621 | None:intergenic | 40.0% |
| ACAAAATGGCTCCTATTGGC+AGG | + | chr1.3:17101454-17101473 | None:intergenic | 45.0% | |
| ATAAGATACTACCTCCGTCC+CGG | - | chr1.3:17100756-17100775 | MS.gene25205:intron | 45.0% | |
| ATCAGACACCAGATGTCATG+TGG | - | chr1.3:17104066-17104085 | MS.gene25205:intron | 45.0% | |
| ATTACGAGCAACCCAATTCG+CGG | + | chr1.3:17102747-17102766 | None:intergenic | 45.0% | |
| CAAAATGGCTCCTATTGGCA+GGG | + | chr1.3:17101453-17101472 | None:intergenic | 45.0% | |
| CACCACCACAAATCCAAGTA+AGG | - | chr1.3:17103768-17103787 | MS.gene25205:intron | 45.0% | |
| CACGGTTCCTGTATATTTCC+AGG | - | chr1.3:17104385-17104404 | MS.gene25205:intron | 45.0% | |
| CACTATAAAGCTGGTTGCAG+AGG | + | chr1.3:17101486-17101505 | None:intergenic | 45.0% | |
| CCTGGGAGTTGTGATTTCAA+AGG | - | chr1.3:17103733-17103752 | MS.gene25205:intron | 45.0% | |
| CGTCAAAGAGTCTCACATGT+TGG | + | chr1.3:17102622-17102641 | None:intergenic | 45.0% | |
| GACAGCTATGGCAGTAATGT+TGG | + | chr1.3:17102792-17102811 | None:intergenic | 45.0% | |
| GATACAGGCAGCACTTGATT+GGG | - | chr1.3:17103585-17103604 | MS.gene25205:intron | 45.0% | |
| GCAATGTAAACCACAAGGCA+TGG | - | chr1.3:17102007-17102026 | MS.gene25205:CDS | 45.0% | |
| GTTCCTAACAACGAGCTACT+TGG | - | chr1.3:17102698-17102717 | MS.gene25205:CDS | 45.0% | |
| TACATCTTTGTGGTGAGCAG+TGG | - | chr1.3:17104837-17104856 | MS.gene25205:intron | 45.0% | |
| TCCGGCATCTGAAAGCAATT+GGG | - | chr1.3:17103438-17103457 | MS.gene25205:intron | 45.0% | |
| TGAAGAAGAGCCTGAATCAG+TGG | + | chr1.3:17104916-17104935 | None:intergenic | 45.0% | |
| TGATACAGGCAGCACTTGAT+TGG | - | chr1.3:17103584-17103603 | MS.gene25205:intron | 45.0% | |
| TGCAAATACAGTACCAGCAC+CGG | + | chr1.3:17103509-17103528 | None:intergenic | 45.0% | |
| TGGGAAAGAGTCGAGTATGA+TGG | + | chr1.3:17102945-17102964 | None:intergenic | 45.0% | |
| TGGGACCCGCCAAATTTATA+TGG | + | chr1.3:17101910-17101929 | None:intergenic | 45.0% | |
| TGGGTCTCAACAAATCATGC+AGG | - | chr1.3:17101882-17101901 | MS.gene25205:CDS | 45.0% | |
| TTCTGTTGGACTTGGCATGT+TGG | + | chr1.3:17102570-17102589 | None:intergenic | 45.0% | |
| ! | TTTTAGTCACCGAGTCAGGA+TGG | - | chr1.3:17103248-17103267 | MS.gene25205:intron | 45.0% |
| ! | TTTTTATGCGAACGGAGCAC+CGG | - | chr1.3:17103465-17103484 | MS.gene25205:intron | 45.0% |
| !! | AAGTGCTGTGCCGTTTATCT+TGG | + | chr1.3:17104877-17104896 | None:intergenic | 45.0% |
| !! | ATCAGTGGAGTTGATAGCAG+GGG | + | chr1.3:17104901-17104920 | None:intergenic | 45.0% |
| !! | CCTGACTCGGTGACTAAAAT+AGG | + | chr1.3:17103247-17103266 | None:intergenic | 45.0% |
| !! | CCTTTGAAATCACAACTCCC+AGG | + | chr1.3:17103736-17103755 | None:intergenic | 45.0% |
| !! | GAATCAGTGGAGTTGATAGC+AGG | + | chr1.3:17104903-17104922 | None:intergenic | 45.0% |
| !! | GCTATCAACTCCACTGATTC+AGG | - | chr1.3:17104903-17104922 | MS.gene25205:intron | 45.0% |
| !! | GGATGTTTTGAGCCTTGAGA+AGG | + | chr1.3:17102601-17102620 | None:intergenic | 45.0% |
| !! | TATCGGTGTTGTGTCTGTGT+CGG | + | chr1.3:17103958-17103977 | None:intergenic | 45.0% |
| !!! | CCTATTTTAGTCACCGAGTC+AGG | - | chr1.3:17103244-17103263 | MS.gene25205:intron | 45.0% |
| !!! | TGGGGGCTTTTTTATGCGAA+CGG | - | chr1.3:17103457-17103476 | MS.gene25205:intron | 45.0% |
| !!! | TATATTTTTCAATTAATTTA+TGG | - | chr1.3:17104160-17104179 | MS.gene25205:intron | 5.0% |
| ACGAGAACAGGAGCTGCATT+TGG | + | chr1.3:17102839-17102858 | None:intergenic | 50.0% | |
| ATAAACTACTCCCTCCGTCC+CGG | + | chr1.3:17100982-17101001 | None:intergenic | 50.0% | |
| ATCTTTGTGGTGAGCAGTGG+CGG | - | chr1.3:17104840-17104859 | MS.gene25205:intron | 50.0% | |
| ATGGGTCAGTTATTCCGGGA+CGG | - | chr1.3:17100965-17100984 | MS.gene25205:intron | 50.0% | |
| CAATGCAACTGCCGCGAATT+GGG | - | chr1.3:17102733-17102752 | MS.gene25205:CDS | 50.0% | |
| CAGCACTTGATTGGGCTTGT+GGG | - | chr1.3:17103593-17103612 | MS.gene25205:intron | 50.0% | |
| CCCCAATTGCTTTCAGATGC+CGG | + | chr1.3:17103442-17103461 | None:intergenic | 50.0% | |
| CCGGCATCTGAAAGCAATTG+GGG | - | chr1.3:17103439-17103458 | MS.gene25205:intron | 50.0% | |
| CGAAGACTTGAGATCAGGTC+CGG | - | chr1.3:17103420-17103439 | MS.gene25205:intron | 50.0% | |
| CGAGAACAGGAGCTGCATTT+GGG | + | chr1.3:17102838-17102857 | None:intergenic | 50.0% | |
| CGGCATCTGAAAGCAATTGG+GGG | - | chr1.3:17103440-17103459 | MS.gene25205:intron | 50.0% | |
| CTTCTTGCACTTGCCAAGAC+TGG | - | chr1.3:17102656-17102675 | MS.gene25205:CDS | 50.0% | |
| CTTGGCAAGTGCAAGAAGCA+TGG | + | chr1.3:17102654-17102673 | None:intergenic | 50.0% | |
| GCATTATCAGGAGTTGCGTC+CGG | + | chr1.3:17103298-17103317 | None:intergenic | 50.0% | |
| GGAGAACAATCCACCTTTCC+TGG | + | chr1.3:17103619-17103638 | None:intergenic | 50.0% | |
| GTCCGGCATCTGAAAGCAAT+TGG | - | chr1.3:17103437-17103456 | MS.gene25205:intron | 50.0% | |
| GTGAGCAGTGGCGGTAAAAA+CGG | - | chr1.3:17104849-17104868 | MS.gene25205:intron | 50.0% | |
| TATCCGGTTCAGAACACGGT+TGG | + | chr1.3:17103654-17103673 | None:intergenic | 50.0% | |
| TCGCTCTCTTGCGCTAATCT+AGG | - | chr1.3:17101639-17101658 | MS.gene25205:intron | 50.0% | |
| TGTAGCGCAGATACGAGAAC+AGG | + | chr1.3:17102851-17102870 | None:intergenic | 50.0% | |
| TTGGCAACATTCCCGCACAA+GGG | + | chr1.3:17101152-17101171 | None:intergenic | 50.0% | |
| TTTGGCAACATTCCCGCACA+AGG | + | chr1.3:17101153-17101172 | None:intergenic | 50.0% | |
| ! | AGCTTCCTTATTTGGCGGCA+AGG | + | chr1.3:17103128-17103147 | None:intergenic | 50.0% |
| ! | GCTTCCTTATTTGGCGGCAA+GGG | + | chr1.3:17103127-17103146 | None:intergenic | 50.0% |
| ! | TGGATTTGTGGTGGTGACAG+AGG | + | chr1.3:17103764-17103783 | None:intergenic | 50.0% |
| ACCACAAGGCATGGCTCAGT+TGG | - | chr1.3:17102016-17102035 | MS.gene25205:CDS | 55.0% | |
| ACCTTACACTTGACCGGTGC+TGG | - | chr1.3:17103493-17103512 | MS.gene25205:intron | 55.0% | |
| AGAAACCGTGGCCCTTCTCA+AGG | - | chr1.3:17102586-17102605 | MS.gene25205:CDS | 55.0% | |
| AGAAGGGCCACGGTTTCTGT+TGG | + | chr1.3:17102584-17102603 | None:intergenic | 55.0% | |
| CCAATGCAACTGCCGCGAAT+TGG | - | chr1.3:17102732-17102751 | MS.gene25205:CDS | 55.0% | |
| CCAATTCGCGGCAGTTGCAT+TGG | + | chr1.3:17102735-17102754 | None:intergenic | 55.0% | |
| GACTTCGGAACCGACAGCTA+TGG | + | chr1.3:17102804-17102823 | None:intergenic | 55.0% | |
| GCAGCACTTGATTGGGCTTG+TGG | - | chr1.3:17103592-17103611 | MS.gene25205:intron | 55.0% | |
| GCCAAGTCCAACAGAAACCG+TGG | - | chr1.3:17102574-17102593 | MS.gene25205:CDS | 55.0% | |
| GCCACGGTTTCTGTTGGACT+TGG | + | chr1.3:17102578-17102597 | None:intergenic | 55.0% | |
| GGTCAATTATACCGGGACGG+AGG | + | chr1.3:17100770-17100789 | None:intergenic | 55.0% | |
| GTCAGTTATTCCGGGACGGA+GGG | - | chr1.3:17100969-17100988 | MS.gene25205:intron | 55.0% | |
| TCGGACGAACCACCTTTGGA+GGG | + | chr1.3:17103274-17103293 | None:intergenic | 55.0% | |
| TTGAGCCTTGAGAAGGGCCA+CGG | + | chr1.3:17102594-17102613 | None:intergenic | 55.0% | |
| TTTGGAGGGCCATCCTGACT+CGG | + | chr1.3:17103260-17103279 | None:intergenic | 55.0% | |
| ! | CACGGTTGGCCATGCAACAA+AGG | + | chr1.3:17103640-17103659 | None:intergenic | 55.0% |
| ! | CCTTATTTGGCGGCAAGGGA+CGG | + | chr1.3:17103123-17103142 | None:intergenic | 55.0% |
| ! | TGGCCAACCGTGTTCTGAAC+CGG | - | chr1.3:17103648-17103667 | MS.gene25205:intron | 55.0% |
| !! | ACCAGCACCGGTCAAGTGTA+AGG | + | chr1.3:17103497-17103516 | None:intergenic | 55.0% |
| !! | ATCCTCTACGCCTGGCTTTG+TGG | + | chr1.3:17101579-17101598 | None:intergenic | 55.0% |
| AAGCCAGGCGTAGAGGATCC+TGG | - | chr1.3:17101581-17101600 | MS.gene25205:intron | 60.0% | |
| AGCCAGGCGTAGAGGATCCT+GGG | - | chr1.3:17101582-17101601 | MS.gene25205:intron | 60.0% | |
| ATCAGGAGTTGCGTCCGGCT+CGG | + | chr1.3:17103293-17103312 | None:intergenic | 60.0% | |
| CAAAGGTGGTTCGTCCGAGC+CGG | - | chr1.3:17103276-17103295 | MS.gene25205:intron | 60.0% | |
| CACCACAAAGCCAGGCGTAG+AGG | - | chr1.3:17101574-17101593 | MS.gene25205:intron | 60.0% | |
| CCGTCCCTTGCCGCCAAATA+AGG | - | chr1.3:17103120-17103139 | MS.gene25205:intron | 60.0% | |
| CTCGGACGAACCACCTTTGG+AGG | + | chr1.3:17103275-17103294 | None:intergenic | 60.0% | |
| CTTGATTGGGCTTGTGGGCC+AGG | - | chr1.3:17103598-17103617 | MS.gene25205:intron | 60.0% | |
| GAGTCAGGATGGCCCTCCAA+AGG | - | chr1.3:17103259-17103278 | MS.gene25205:intron | 60.0% | |
| GCCAACTGAGCCATGCCTTG+TGG | + | chr1.3:17102020-17102039 | None:intergenic | 60.0% | |
| GGTCAGTTATTCCGGGACGG+AGG | - | chr1.3:17100968-17100987 | MS.gene25205:intron | 60.0% | |
| TCAGGATGGCCCTCCAAAGG+TGG | - | chr1.3:17103262-17103281 | MS.gene25205:intron | 60.0% | |
| TTGGGCTTGTGGGCCAGGAA+AGG | - | chr1.3:17103603-17103622 | MS.gene25205:intron | 60.0% | |
| GCCAGCTGCACCACAAAGCC+AGG | - | chr1.3:17101566-17101585 | MS.gene25205:intron | 65.0% | |
| GGCTTGTGGGCCAGGAAAGG+TGG | - | chr1.3:17103606-17103625 | MS.gene25205:intron | 65.0% | |
| ! | CGGCTCGGACGAACCACCTT+TGG | + | chr1.3:17103278-17103297 | None:intergenic | 65.0% |
| !! | GCCTGGCTTTGTGGTGCAGC+TGG | + | chr1.3:17101570-17101589 | None:intergenic | 65.0% |
| GGCCCAGGATCCTCTACGCC+TGG | + | chr1.3:17101587-17101606 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 17100441 | 17105010 | 17100441 | ID=MS.gene25205 |
| chr1.3 | mRNA | 17100441 | 17105010 | 17100441 | ID=MS.gene25205.t1;Parent=MS.gene25205 |
| chr1.3 | exon | 17104950 | 17105010 | 17104950 | ID=MS.gene25205.t1.exon1;Parent=MS.gene25205.t1 |
| chr1.3 | CDS | 17104950 | 17105010 | 17104950 | ID=cds.MS.gene25205.t1;Parent=MS.gene25205.t1 |
| chr1.3 | exon | 17101667 | 17102920 | 17101667 | ID=MS.gene25205.t1.exon2;Parent=MS.gene25205.t1 |
| chr1.3 | CDS | 17101667 | 17102920 | 17101667 | ID=cds.MS.gene25205.t1;Parent=MS.gene25205.t1 |
| chr1.3 | exon | 17101041 | 17101068 | 17101041 | ID=MS.gene25205.t1.exon3;Parent=MS.gene25205.t1 |
| chr1.3 | CDS | 17101041 | 17101068 | 17101041 | ID=cds.MS.gene25205.t1;Parent=MS.gene25205.t1 |
| chr1.3 | exon | 17100441 | 17100594 | 17100441 | ID=MS.gene25205.t1.exon4;Parent=MS.gene25205.t1 |
| chr1.3 | CDS | 17100441 | 17100594 | 17100441 | ID=cds.MS.gene25205.t1;Parent=MS.gene25205.t1 |
| Gene Sequence |
| Protein sequence |
