AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25376

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25376.t1 MTR_8g469430 89.310 290 24 3 1 287 1 286 2.03e-174 483
MS.gene25376.t1 MTR_5g038280 53.754 333 99 11 1 287 1 324 1.62e-99 295
MS.gene25376.t1 MTR_4g107650 41.088 331 134 9 10 287 15 337 1.55e-54 180
MS.gene25376.t1 MTR_6g007647 68.687 99 31 0 88 186 31 129 1.38e-40 141
MS.gene25376.t1 MTR_6g007647 50.000 152 71 1 40 186 12 163 2.24e-40 142
MS.gene25376.t1 MTR_8g089895 46.386 166 66 4 82 227 45 207 1.32e-37 135
MS.gene25376.t1 MTR_3g086790 56.780 118 51 0 82 199 52 169 2.34e-36 132
MS.gene25376.t1 MTR_5g039000 47.205 161 67 3 27 185 28 172 2.68e-35 128
MS.gene25376.t1 MTR_8g468210 52.239 134 62 1 52 185 41 172 7.35e-35 127
MS.gene25376.t1 MTR_3g080100 55.462 119 50 1 90 208 20 135 1.28e-34 125
MS.gene25376.t1 MTR_3g080100 55.462 119 50 1 90 208 59 174 2.72e-34 125
MS.gene25376.t1 MTR_6g011610 59.649 114 45 1 73 185 78 191 4.02e-34 125
MS.gene25376.t1 MTR_6g011610 60.714 112 43 1 75 185 61 172 4.41e-34 124
MS.gene25376.t1 MTR_7g010020 57.292 96 41 0 90 185 80 175 1.27e-25 102
MS.gene25376.t1 MTR_8g026960 37.640 178 88 6 94 265 38 198 1.39e-24 99.4
MS.gene25376.t1 MTR_7g103340 51.546 97 40 1 90 186 63 152 1.80e-24 99.0
MS.gene25376.t1 MTR_1g061660 51.546 97 40 1 90 186 59 148 1.67e-23 96.3
MS.gene25376.t1 MTR_3g092150 52.747 91 43 0 92 182 40 130 2.39e-23 96.3
MS.gene25376.t1 MTR_5g019680 58.571 70 29 0 90 159 53 122 4.53e-19 83.6
MS.gene25376.t1 MTR_5g019650 58.571 70 29 0 90 159 53 122 1.51e-18 82.4
MS.gene25376.t1 MTR_4g126900 47.253 91 41 1 93 183 91 174 1.06e-17 80.1
MS.gene25376.t1 MTR_4g100550 42.735 117 58 2 69 183 97 206 2.49e-17 80.5
MS.gene25376.t1 MTR_7g093430 39.231 130 64 3 54 183 132 246 5.94e-17 79.7
MS.gene25376.t1 MTR_1g054285 42.241 116 55 2 68 183 137 240 2.98e-16 77.4
MS.gene25376.t1 MTR_1g017090 46.875 96 44 1 88 183 128 216 6.27e-16 76.6
MS.gene25376.t1 MTR_5g014890 45.745 94 44 1 90 183 123 209 1.00e-15 75.9
MS.gene25376.t1 MTR_5g013010 41.880 117 57 2 67 183 117 222 2.04e-15 75.1
MS.gene25376.t1 MTR_4g084750 43.750 96 47 1 88 183 63 151 2.08e-15 73.6
MS.gene25376.t1 MTR_4g097600 43.519 108 51 2 76 183 116 213 2.35e-15 74.7
MS.gene25376.t1 MTR_2g061030 39.474 114 62 1 70 183 180 286 3.81e-15 74.7
MS.gene25376.t1 MTR_8g006705 45.745 94 44 1 90 183 146 232 1.55e-14 72.8
MS.gene25376.t1 MTR_3g103590 50.000 72 36 0 90 161 145 216 3.14e-13 68.9
MS.gene25376.t1 MTR_2g038625 41.489 94 48 1 90 183 82 168 9.12e-12 63.5
MS.gene25376.t1 MTR_2g038580 41.489 94 48 1 90 183 82 168 9.12e-12 63.5
MS.gene25376.t1 MTR_5g013010 50.000 66 29 1 77 142 127 188 9.65e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25376.t1 AT3G01470 61.682 107 41 0 88 194 66 172 4.89e-40 140
MS.gene25376.t1 AT4G40060 49.660 147 65 3 79 219 45 188 6.47e-37 133
MS.gene25376.t1 AT2G22430 64.948 97 34 0 90 186 62 158 1.03e-35 130
MS.gene25376.t1 AT1G69780 57.265 117 49 1 70 185 64 180 3.07e-35 129
MS.gene25376.t1 AT5G15150 47.712 153 61 2 33 185 77 210 1.11e-34 127
MS.gene25376.t1 AT5G65310 63.918 97 35 0 90 186 54 150 2.22e-34 126
MS.gene25376.t1 AT5G65310 63.918 97 35 0 90 186 72 168 2.65e-34 127
MS.gene25376.t1 AT3G01220 59.375 96 39 0 90 185 87 182 3.48e-31 118
MS.gene25376.t1 AT1G27045 36.816 201 101 3 75 275 10 184 4.20e-31 115
MS.gene25376.t1 AT1G27045 36.816 201 101 3 75 275 10 184 4.20e-31 115
MS.gene25376.t1 AT1G27045 36.816 201 101 3 75 275 2 176 4.91e-31 114
MS.gene25376.t1 AT1G27045 50.781 128 59 1 75 202 53 176 7.02e-31 115
MS.gene25376.t1 AT1G27045 55.238 105 47 0 75 179 53 157 3.25e-29 112
MS.gene25376.t1 AT1G26960 52.174 115 54 1 72 185 52 166 4.09e-28 108
MS.gene25376.t1 AT2G46680 48.182 110 57 0 84 193 26 135 1.21e-25 102
MS.gene25376.t1 AT2G46680 50.515 97 48 0 84 180 26 122 2.78e-24 99.0
MS.gene25376.t1 AT3G61890 50.495 101 49 1 93 193 33 132 3.66e-24 98.2
MS.gene25376.t1 AT4G36740 48.182 110 50 1 90 199 55 157 5.39e-23 94.4
MS.gene25376.t1 AT4G36740 48.182 110 50 1 90 199 56 158 5.63e-23 94.4
MS.gene25376.t1 AT5G03790 54.023 87 40 0 90 176 77 163 7.19e-23 94.7
MS.gene25376.t1 AT5G03790 59.722 72 29 0 90 161 77 148 5.81e-22 91.3
MS.gene25376.t1 AT2G36610 46.667 105 41 2 87 183 68 165 2.33e-21 89.4
MS.gene25376.t1 AT5G66700 58.571 70 29 0 90 159 71 140 5.59e-21 89.4
MS.gene25376.t1 AT2G18550 45.455 110 53 1 90 199 61 163 6.28e-21 89.0
MS.gene25376.t1 AT5G06710 43.750 112 51 2 72 183 177 276 9.60e-18 82.4
MS.gene25376.t1 AT5G53980 41.837 98 57 0 90 187 11 108 3.93e-17 77.0
MS.gene25376.t1 AT4G37790 42.857 112 52 2 72 183 113 212 4.38e-17 79.7
MS.gene25376.t1 AT5G47370 41.284 109 53 2 75 183 119 216 5.29e-15 73.9
MS.gene25376.t1 AT2G01430 36.257 171 89 5 14 183 74 225 6.17e-15 73.6
MS.gene25376.t1 AT2G22800 45.745 94 44 1 90 183 113 199 9.29e-15 73.2
MS.gene25376.t1 AT2G44910 45.745 94 44 1 90 183 163 249 1.35e-14 73.2
MS.gene25376.t1 AT4G17460 40.870 115 58 3 76 189 123 228 2.61e-14 72.0
MS.gene25376.t1 AT4G16780 40.541 111 52 2 73 183 119 215 3.18e-14 71.6
MS.gene25376.t1 AT3G60390 44.681 94 45 1 90 183 162 248 3.47e-14 72.0
MS.gene25376.t1 AT5G06710 49.296 71 31 1 72 142 177 242 2.44e-13 68.9
MS.gene25376.t1 AT2G01430 44.286 70 39 0 73 142 122 191 1.82e-11 62.8
MS.gene25376.t1 AT1G70920 40.594 101 50 2 75 168 27 124 3.33e-11 61.2
MS.gene25376.t1 AT1G70920 42.553 94 47 1 90 183 69 155 3.85e-11 61.6

Find 42 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATCTTGCTCTCCTATTT+TGG 0.157164 8.2:+39761959 None:intergenic
GCAAGTTGAACTTTCCTTCC+AGG 0.262711 8.2:+39762024 None:intergenic
CATCCAACATCTTCAACTTT+AGG 0.279222 8.2:+39760997 None:intergenic
TGGCTATATGGTTCCAAAAT+AGG 0.286402 8.2:-39761972 MS.gene25376:CDS
ATGGAACATTCAAGATGTTT+TGG 0.287450 8.2:+39761025 None:intergenic
GGATTCAGGTTCCAATTCTA+TGG 0.296135 8.2:-39762244 MS.gene25376:intron
CACAACATCAACCATAGAAT+TGG 0.343400 8.2:+39762233 None:intergenic
TTTCAAGAAAATGAACTTGT+TGG 0.363914 8.2:+39762076 None:intergenic
AGCCAAGACAAGTGGCTATA+TGG 0.377381 8.2:-39761984 MS.gene25376:CDS
CAAAACGTTTGATCTTCAAA+TGG 0.398529 8.2:+39760934 None:intergenic
TGAGCTCGTCAACTCTCTCT+TGG 0.402549 8.2:-39762834 MS.gene25376:CDS
TGTGAAAATTCTGACTGGTT+TGG 0.408830 8.2:+39761069 None:intergenic
CTGGTTTGGTTCCACAACTA+AGG 0.419648 8.2:+39761083 None:intergenic
ATGGTTGATGTTGTGAATGT+TGG 0.424290 8.2:-39762225 MS.gene25376:CDS
TCTTCAACTTTAGGTATGAA+TGG 0.429614 8.2:+39761006 None:intergenic
TATTTCTCTCAAGAAAAGAT+TGG 0.446084 8.2:-39761223 MS.gene25376:CDS
GGTTTCCATCAGTGTTCTGT+AGG 0.464695 8.2:+39761109 None:intergenic
AAAACGTTTGATCTTCAAAT+GGG 0.474317 8.2:+39760935 None:intergenic
AAACAGCTAGAAAAGGACTA+TGG 0.477186 8.2:-39761931 MS.gene25376:CDS
CATCTTGTGAAAATTCTGAC+TGG 0.483181 8.2:+39761064 None:intergenic
ATACCTAAAGTTGAAGATGT+TGG 0.484817 8.2:-39761000 MS.gene25376:CDS
AATGAATCACCTTGACAAGA+AGG 0.485040 8.2:+39762791 None:intergenic
AACCATATAGCCACTTGTCT+TGG 0.489367 8.2:+39761982 None:intergenic
ATAGAAAACAAGCTTGAACC+TGG 0.511077 8.2:-39762042 MS.gene25376:CDS
CAAAACAAAACAGCTAGAAA+AGG 0.514734 8.2:-39761938 MS.gene25376:CDS
TGCACCAACCAGGTAAGAAA+AGG 0.516937 8.2:-39762110 MS.gene25376:CDS
TTGGTTCCACAACTAAGGAT+TGG 0.517249 8.2:+39761088 None:intergenic
TTTGTGAAATGATATCATCA+AGG 0.518295 8.2:+39761160 None:intergenic
TTGTGAAATGATATCATCAA+GGG 0.525597 8.2:+39761161 None:intergenic
AGCTCAAAACCTTCTTGTCA+AGG 0.547348 8.2:-39762800 MS.gene25376:intron
AAACAACAAATTAAAAGAAG+AGG 0.565427 8.2:-39761851 MS.gene25376:intron
GTTGTGAATGTTGGTGACAT+GGG 0.567777 8.2:-39762216 MS.gene25376:CDS
GAATGCCTACAGAACACTGA+TGG 0.567809 8.2:-39761114 MS.gene25376:CDS
TGTTGTGAATGTTGGTGACA+TGG 0.586351 8.2:-39762217 MS.gene25376:CDS
GAGGTGAGCTTGCACCAACC+AGG 0.587649 8.2:-39762120 MS.gene25376:CDS
AAAACAAGCTTGAACCTGGA+AGG 0.588635 8.2:-39762038 MS.gene25376:CDS
TAGCTTGCAGCCAAGACAAG+TGG 0.597298 8.2:-39761992 MS.gene25376:CDS
TGGAAACCAATCCTTAGTTG+TGG 0.606983 8.2:-39761094 MS.gene25376:CDS
AAGGAAAGTTCAACTTGCAA+AGG 0.607696 8.2:-39762019 MS.gene25376:CDS
ACCAACCAGGTAAGAAAAGG+AGG 0.621874 8.2:-39762107 MS.gene25376:CDS
TGATGATGATGAGAACTATG+AGG 0.658523 8.2:-39762139 MS.gene25376:CDS
AAGCTACAGCAACTTGCATG+TGG 0.664792 8.2:+39760964 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACAAAGTTACATTTTTTT+AGG - chr8.2:39761553-39761572 MS.gene25376:intron 15.0%
!! AAACAACAAATTAAAAGAAG+AGG - chr8.2:39761972-39761991 MS.gene25376:CDS 20.0%
!! TATTGTGATTCTTTAATTGA+CGG + chr8.2:39761346-39761365 None:intergenic 20.0%
!! TTCACAAAATAAAAATGATG+TGG - chr8.2:39762678-39762697 MS.gene25376:intron 20.0%
!!! AAACATCATCTTTTAAAACA+AGG + chr8.2:39761486-39761505 None:intergenic 20.0%
!!! ATATAATTTTATCCCACTAA+TGG - chr8.2:39762539-39762558 MS.gene25376:intron 20.0%
!!! ATTCAATCTTGATTTTTCAT+CGG + chr8.2:39761510-39761529 None:intergenic 20.0%
!!! CAAGCTTAATCTATTTTTAT+CGG - chr8.2:39762311-39762330 MS.gene25376:intron 20.0%
!!! TAATGGTAAGTGATTAATTT+TGG - chr8.2:39762556-39762575 MS.gene25376:intron 20.0%
!!! TATTTTCCTCTTTTTTTCTT+GGG + chr8.2:39762627-39762646 None:intergenic 20.0%
!!! TTATTTTCCTCTTTTTTTCT+TGG + chr8.2:39762628-39762647 None:intergenic 20.0%
! AAAACGTTTGATCTTCAAAT+GGG + chr8.2:39762891-39762910 None:intergenic 25.0%
! AATTAATCACTTACCATTAG+TGG + chr8.2:39762555-39762574 None:intergenic 25.0%
! ATTAATCACTTACCATTAGT+GGG + chr8.2:39762554-39762573 None:intergenic 25.0%
! TATTTCTCTCAAGAAAAGAT+TGG - chr8.2:39762600-39762619 MS.gene25376:intron 25.0%
! TGTTTCCATTATAAATTTCC+CGG - chr8.2:39761427-39761446 MS.gene25376:intron 25.0%
! TTGTGAAATGATATCATCAA+GGG + chr8.2:39762665-39762684 None:intergenic 25.0%
! TTTCAAGAAAATGAACTTGT+TGG + chr8.2:39761750-39761769 None:intergenic 25.0%
! TTTGTGAAATGATATCATCA+AGG + chr8.2:39762666-39762685 None:intergenic 25.0%
!! AACAAGTTCATTTTCTTGAA+AGG - chr8.2:39761749-39761768 MS.gene25376:intron 25.0%
!! ACAAATTTTACATTTTGCAC+AGG + chr8.2:39762418-39762437 None:intergenic 25.0%
!! AGCTTTTGTCAAAATTAAAG+TGG - chr8.2:39761296-39761315 MS.gene25376:intron 25.0%
!! CAAATTTTACATTTTGCACA+GGG + chr8.2:39762417-39762436 None:intergenic 25.0%
!! TGTTAATGTTGATAAGTTCT+TGG + chr8.2:39762454-39762473 None:intergenic 25.0%
!! TTGACAAAAGCTACATTTTA+GGG + chr8.2:39761288-39761307 None:intergenic 25.0%
!! TTTGACAAAAGCTACATTTT+AGG + chr8.2:39761289-39761308 None:intergenic 25.0%
!!! AAGTTACATTTTTTTAGGCT+TGG - chr8.2:39761558-39761577 MS.gene25376:intron 25.0%
!!! ATCTATTTTTATCGGTCATT+TGG - chr8.2:39762319-39762338 MS.gene25376:intron 25.0%
AAACAGAAGTTGGATTCTTA+TGG - chr8.2:39761171-39761190 MS.gene25376:CDS 30.0%
ATACCTAAAGTTGAAGATGT+TGG - chr8.2:39762823-39762842 MS.gene25376:CDS 30.0%
CAAAACAAAACAGCTAGAAA+AGG - chr8.2:39761885-39761904 MS.gene25376:CDS 30.0%
CAAAACGTTTGATCTTCAAA+TGG + chr8.2:39762892-39762911 None:intergenic 30.0%
TCTTCAACTTTAGGTATGAA+TGG + chr8.2:39762820-39762839 None:intergenic 30.0%
TGGTACAACTTTCTTATTAC+AGG - chr8.2:39762576-39762595 MS.gene25376:intron 30.0%
! AAGATCAAACGTTTTGCTTT+TGG - chr8.2:39762896-39762915 MS.gene25376:CDS 30.0%
! ATGGAACATTCAAGATGTTT+TGG + chr8.2:39762801-39762820 None:intergenic 30.0%
! TGCAGATGAAGTTTTCTTTT+TGG - chr8.2:39761144-39761163 MS.gene25376:CDS 30.0%
! TTAGTGCATGTTTGAAATCA+GGG - chr8.2:39761241-39761260 MS.gene25376:intron 30.0%
!!! ATTTTTTTAGGCTTGGATTC+AGG - chr8.2:39761565-39761584 MS.gene25376:intron 30.0%
AAAATGTAGCCGATATGGTT+CGG - chr8.2:39761383-39761402 MS.gene25376:intron 35.0%
AAACAGCTAGAAAAGGACTA+TGG - chr8.2:39761892-39761911 MS.gene25376:CDS 35.0%
AAATGTCCTTAATCGCGAAT+TGG + chr8.2:39761454-39761473 None:intergenic 35.0%
AAGGAAAGTTCAACTTGCAA+AGG - chr8.2:39761804-39761823 MS.gene25376:intron 35.0%
AATCATTGACCGAACCATAT+CGG + chr8.2:39761395-39761414 None:intergenic 35.0%
AATGAATCACCTTGACAAGA+AGG + chr8.2:39761035-39761054 None:intergenic 35.0%
AATGTCCTTAATCGCGAATT+GGG + chr8.2:39761453-39761472 None:intergenic 35.0%
ATAGAAAACAAGCTTGAACC+TGG - chr8.2:39761781-39761800 MS.gene25376:intron 35.0%
ATTGGTCCCAAGAAAAAAAG+AGG - chr8.2:39762618-39762637 MS.gene25376:intron 35.0%
CAACAATCAAGAAGCTACAA+AGG + chr8.2:39761059-39761078 None:intergenic 35.0%
CACAACATCAACCATAGAAT+TGG + chr8.2:39761593-39761612 None:intergenic 35.0%
CATCCAACATCTTCAACTTT+AGG + chr8.2:39762829-39762848 None:intergenic 35.0%
CATCTTGTGAAAATTCTGAC+TGG + chr8.2:39762762-39762781 None:intergenic 35.0%
GTAGTAAAATGTAGCCGATA+TGG - chr8.2:39761378-39761397 MS.gene25376:intron 35.0%
TCAGTGCTATATATGCTTGA+TGG + chr8.2:39762048-39762067 None:intergenic 35.0%
TGGCTATATGGTTCCAAAAT+AGG - chr8.2:39761851-39761870 MS.gene25376:intron 35.0%
! ATGGTTGATGTTGTGAATGT+TGG - chr8.2:39761598-39761617 MS.gene25376:intron 35.0%
! CAAACATGCACTAAGTATTG+TGG + chr8.2:39761235-39761254 None:intergenic 35.0%
! CTTAGTGCATGTTTGAAATC+AGG - chr8.2:39761240-39761259 MS.gene25376:intron 35.0%
! TGAATCTTGCTCTCCTATTT+TGG + chr8.2:39761867-39761886 None:intergenic 35.0%
! TGATGATGATGAGAACTATG+AGG - chr8.2:39761684-39761703 MS.gene25376:intron 35.0%
! TGTGAAAATTCTGACTGGTT+TGG + chr8.2:39762757-39762776 None:intergenic 35.0%
! TTTTGGTCGAAAACAGAAGT+TGG - chr8.2:39761161-39761180 MS.gene25376:CDS 35.0%
!!! CATTCAAGATGTTTTGGCTT+AGG + chr8.2:39762795-39762814 None:intergenic 35.0%
AAAACAAGCTTGAACCTGGA+AGG - chr8.2:39761785-39761804 MS.gene25376:intron 40.0%
AACCATATAGCCACTTGTCT+TGG + chr8.2:39761844-39761863 None:intergenic 40.0%
AGCTCAAAACCTTCTTGTCA+AGG - chr8.2:39761023-39761042 MS.gene25376:CDS 40.0%
TGGAAACCAATCCTTAGTTG+TGG - chr8.2:39762729-39762748 MS.gene25376:intron 40.0%
TTGGGCCGGGAAATTTATAA+TGG + chr8.2:39761435-39761454 None:intergenic 40.0%
TTGGTTCCACAACTAAGGAT+TGG + chr8.2:39762738-39762757 None:intergenic 40.0%
! GGATTCAGGTTCCAATTCTA+TGG - chr8.2:39761579-39761598 MS.gene25376:intron 40.0%
!! GTTGTGAATGTTGGTGACAT+GGG - chr8.2:39761607-39761626 MS.gene25376:intron 40.0%
!! TGTTGTGAATGTTGGTGACA+TGG - chr8.2:39761606-39761625 MS.gene25376:intron 40.0%
AAGCTACAGCAACTTGCATG+TGG + chr8.2:39762862-39762881 None:intergenic 45.0%
ACCAACCAGGTAAGAAAAGG+AGG - chr8.2:39761716-39761735 MS.gene25376:intron 45.0%
AGCCAAGACAAGTGGCTATA+TGG - chr8.2:39761839-39761858 MS.gene25376:intron 45.0%
GAATGCCTACAGAACACTGA+TGG - chr8.2:39762709-39762728 MS.gene25376:intron 45.0%
GGTTTCCATCAGTGTTCTGT+AGG + chr8.2:39762717-39762736 None:intergenic 45.0%
TGCACCAACCAGGTAAGAAA+AGG - chr8.2:39761713-39761732 MS.gene25376:intron 45.0%
! GCAAGTTGAACTTTCCTTCC+AGG + chr8.2:39761802-39761821 None:intergenic 45.0%
! GTGCATGTTTGAAATCAGGG+TGG - chr8.2:39761244-39761263 MS.gene25376:intron 45.0%
!! CTGGTTTGGTTCCACAACTA+AGG + chr8.2:39762743-39762762 None:intergenic 45.0%
ACGAGCACCAGACATGACAT+TGG + chr8.2:39762165-39762184 None:intergenic 50.0%
GTCAGTGCCAATGTCATGTC+TGG - chr8.2:39762155-39762174 MS.gene25376:CDS 50.0%
TCCTTAATCGCGAATTGGGC+CGG + chr8.2:39761449-39761468 None:intergenic 50.0%
TGAGCTCGTCAACTCTCTCT+TGG - chr8.2:39760989-39761008 MS.gene25376:CDS 50.0%
! GCCTCCTTTTCTTACCTGGT+TGG + chr8.2:39761720-39761739 None:intergenic 50.0%
! GTGAGCCTCCTTTTCTTACC+TGG + chr8.2:39761724-39761743 None:intergenic 50.0%
! TAGCTTGCAGCCAAGACAAG+TGG - chr8.2:39761831-39761850 MS.gene25376:intron 50.0%
CCTTAATCGCGAATTGGGCC+GGG + chr8.2:39761448-39761467 None:intergenic 55.0%
CCCGGCCCAATTCGCGATTA+AGG - chr8.2:39761445-39761464 MS.gene25376:intron 60.0%
GAGGTGAGCTTGCACCAACC+AGG - chr8.2:39761703-39761722 MS.gene25376:intron 60.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 39760918 39762927 39760918 ID=MS.gene25376
chr8.2 mRNA 39760918 39762927 39760918 ID=MS.gene25376.t1;Parent=MS.gene25376
chr8.2 exon 39762801 39762927 39762801 ID=MS.gene25376.t1.exon1;Parent=MS.gene25376.t1
chr8.2 CDS 39762801 39762927 39762801 ID=cds.MS.gene25376.t1;Parent=MS.gene25376.t1
chr8.2 exon 39761852 39762258 39761852 ID=MS.gene25376.t1.exon2;Parent=MS.gene25376.t1
chr8.2 CDS 39761852 39762258 39761852 ID=cds.MS.gene25376.t1;Parent=MS.gene25376.t1
chr8.2 exon 39760918 39761247 39760918 ID=MS.gene25376.t1.exon3;Parent=MS.gene25376.t1
chr8.2 CDS 39760918 39761247 39760918 ID=cds.MS.gene25376.t1;Parent=MS.gene25376.t1
Gene Sequence

>MS.gene25376

ATGGAAGATGAGAAGCTTTATGAGAAATCAAGTTCAAGCATGACTATTCTACTTCAAAGTCAAAGCTCTTCTGAGCTCGTCAACTCTCTCTTGGTTCACAATCAAAGCTCAAAACCTTCTTGTCAAGGTGATTCATTACCTTTGTAGCTTCTTGATTGTTGTCTTGAAGTTTTTTATTTTGCTTTTTTTCTTTGAAGTTTGTTTCACATGTTGAGTTTTTCTTAAGTGCAGATGAAGTTTTCTTTTTGGTCGAAAACAGAAGTTGGATTCTTATGGTTTCTTCTTATCTGTTTTAAATTGCTATTCTAATAGTGCCACAATACTTAGTGCATGTTTGAAATCAGGGTGGTAACGTGATTTCTTGAAACCCTAAAATGTAGCTTTTGTCAAAATTAAAGTGGTACAATTTGATTCTATCTAACTCACCGTCAATTAAAGAATCACAATATTTTAGTGAATCGTAGTAAAATGTAGCCGATATGGTTCGGTCAATGATTATGTTGTAATCATGTTTCCATTATAAATTTCCCGGCCCAATTCGCGATTAAGGACATTTTTTTTTAAACCTTGTTTTAAAAGATGATGTTTTCCGATGAAAAATCAAGATTGAATCTCATGTAAGTCGAATTATTATAATACAAAGTTACATTTTTTTAGGCTTGGATTCAGGTTCCAATTCTATGGTTGATGTTGTGAATGTTGGTGACATGGGAGTCAAAAGTAGCTCTTTCTTTCAAGCTTTTGAGAAAGAAGAGAACAATGATGATGATGATGATGAGAACTATGAGGTGAGCTTGCACCAACCAGGTAAGAAAAGGAGGCTCACAAACCAACAAGTTCATTTTCTTGAAAGGAATTTTGAGATAGAAAACAAGCTTGAACCTGGAAGGAAAGTTCAACTTGCAAAGGAGCTTAGCTTGCAGCCAAGACAAGTGGCTATATGGTTCCAAAATAGGAGAGCAAGATTCAAAACAAAACAGCTAGAAAAGGACTATGGTTCATTGAAAGCTAGCTATGATATGCTCAAAGTTGACTATGACAATCTCTTTCAAGAAAACAACAAATTAAAAGAAGAGGTAAAAAAATTATACATAAACAAACATATAATATACAAAATCATTTGTCTACCATCAAGCATATATAGCACTGACACATCTCGTGTCTCGAACTCTAACATATGTGATTATATTCAATTAATGTATGTTCTCAAATTATTTTCGATATCAATATTCAATACGTCAGTGCCAATGTCATGTCTGGTGCTCGTATTAGTGTTTATAGATTCTTGATATGACAAAAACAAAGACGTATGCATTCACTATGTTTTGATTTTATTTTTAAATATGATATATTGTTATTATAATAGTTTTTAAATGTCTTAAAATCATCAAAACAAGCTTAATCTATTTTTATCGGTCATTTGGATCTTTAAATGTGTCTTTAGTTAGTTAAATAATTACTCAAATGTATTTTTCAATAGTCAATTTTTTACAAAACCCTGTGCAAAATGTAAAATTTGTTATTATCATCTAGCCAAGAACTTATCAACATTAACAATCACTTACACGCAACATCTCTCTTTATGCTTATTTTTTTCTCAGTACTGCTTTGAGCATTTTACATATAATTTTATCCCACTAATGGTAAGTGATTAATTTTGGTACAACTTTCTTATTACAGGTTATTTCTCTCAAGAAAAGATTGGTCCCAAGAAAAAAAGAGGAAAATAATTTAGTTGATAAGTCCCTTGATGATATCATTTCACAAAATAAAAATGATGTGGTTGATTCAGAATGCCTACAGAACACTGATGGAAACCAATCCTTAGTTGTGGAACCAAACCAGTCAGAATTTTCACAAGATGAAGAAGACATCCTAAGCCAAAACATCTTGAATGTTCCATTCATACCTAAAGTTGAAGATGTTGGATGTTATGATGAACCACATGCAAGTTGCTGTAGCTTTCAGTTCCCATTTGAAGATCAAACGTTTTGCTTTTGGTCTTATTGA
Protein sequence

>MS.gene25376.t1

MEDEKLYEKSSSSMTILLQSQSSSELVNSLLVHNQSSKPSCQGSNSMVDVVNVGDMGVKSSSFFQAFEKEENNDDDDDENYEVSLHQPGKKRRLTNQQVHFLERNFEIENKLEPGRKVQLAKELSLQPRQVAIWFQNRRARFKTKQLEKDYGSLKASYDMLKVDYDNLFQENNKLKEEVISLKKRLVPRKKEENNLVDKSLDDIISQNKNDVVDSECLQNTDGNQSLVVEPNQSEFSQDEEDILSQNILNVPFIPKVEDVGCYDEPHASCCSFQFPFEDQTFCFWSY