Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25582.t1 | RHN40989.1 | 57.1 | 301 | 104 | 10 | 1 | 279 | 35 | 332 | 2.50E-74 | 288.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25582.t1 | P17840 | 33.4 | 317 | 165 | 12 | 3 | 279 | 39 | 349 | 3.3e-30 | 133.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25582.t1 | A0A072U1E3 | 57.1 | 301 | 104 | 10 | 1 | 279 | 35 | 332 | 1.8e-74 | 288.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene04975 | MS.gene25582 | 0.800374 | 1.48E-48 | -1.69E-46 |
MS.gene053356 | MS.gene25582 | 0.807969 | 3.90E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25582.t1 | MTR_8g465160 | 57.616 | 302 | 101 | 11 | 1 | 279 | 35 | 332 | 2.65e-90 | 285 |
MS.gene25582.t1 | MTR_8g465150 | 56.352 | 307 | 89 | 10 | 1 | 279 | 35 | 324 | 8.84e-87 | 276 |
MS.gene25582.t1 | MTR_8g061110 | 53.917 | 217 | 82 | 6 | 78 | 279 | 3 | 216 | 3.95e-60 | 203 |
MS.gene25582.t1 | MTR_4g091570 | 33.229 | 319 | 160 | 13 | 3 | 279 | 262 | 569 | 2.43e-35 | 134 |
MS.gene25582.t1 | MTR_2g011170 | 31.683 | 303 | 170 | 9 | 11 | 278 | 38 | 338 | 6.42e-33 | 127 |
MS.gene25582.t1 | MTR_2g011170 | 31.683 | 303 | 170 | 9 | 11 | 278 | 38 | 338 | 1.32e-32 | 126 |
MS.gene25582.t1 | MTR_2g089360 | 32.288 | 319 | 163 | 13 | 3 | 278 | 34 | 342 | 3.09e-32 | 125 |
MS.gene25582.t1 | MTR_2g011150 | 31.922 | 307 | 173 | 10 | 3 | 276 | 35 | 338 | 3.50e-32 | 125 |
MS.gene25582.t1 | MTR_3g020230 | 30.769 | 312 | 175 | 10 | 3 | 278 | 36 | 342 | 7.26e-31 | 121 |
MS.gene25582.t1 | MTR_3g019530 | 30.097 | 309 | 178 | 10 | 3 | 278 | 36 | 339 | 1.78e-30 | 120 |
MS.gene25582.t1 | MTR_3g019530 | 30.097 | 309 | 178 | 10 | 3 | 278 | 36 | 339 | 1.98e-30 | 120 |
MS.gene25582.t1 | MTR_3g019530 | 30.097 | 309 | 178 | 10 | 3 | 278 | 36 | 339 | 2.88e-30 | 120 |
MS.gene25582.t1 | MTR_3g019530 | 30.097 | 309 | 178 | 10 | 3 | 278 | 36 | 339 | 3.60e-30 | 119 |
MS.gene25582.t1 | MTR_3g019530 | 30.097 | 309 | 178 | 10 | 3 | 278 | 36 | 339 | 3.66e-30 | 119 |
MS.gene25582.t1 | MTR_3g019500 | 31.013 | 316 | 172 | 13 | 3 | 278 | 36 | 345 | 6.08e-30 | 118 |
MS.gene25582.t1 | MTR_3g019500 | 31.013 | 316 | 172 | 13 | 3 | 278 | 36 | 345 | 1.02e-29 | 118 |
MS.gene25582.t1 | MTR_3g019500 | 31.013 | 316 | 172 | 13 | 3 | 278 | 36 | 345 | 1.32e-29 | 118 |
MS.gene25582.t1 | MTR_4g081750 | 32.143 | 308 | 173 | 10 | 3 | 278 | 32 | 335 | 3.41e-29 | 117 |
MS.gene25582.t1 | MTR_3g019580 | 29.126 | 309 | 182 | 9 | 3 | 278 | 49 | 353 | 4.67e-29 | 116 |
MS.gene25582.t1 | MTR_3g019580 | 29.126 | 309 | 182 | 9 | 3 | 278 | 49 | 353 | 6.85e-29 | 115 |
MS.gene25582.t1 | MTR_3g019580 | 29.126 | 309 | 182 | 9 | 3 | 278 | 49 | 353 | 6.93e-29 | 115 |
MS.gene25582.t1 | MTR_4g081665 | 31.788 | 302 | 171 | 9 | 9 | 278 | 37 | 335 | 7.87e-29 | 115 |
MS.gene25582.t1 | MTR_3g020320 | 29.808 | 312 | 178 | 10 | 3 | 278 | 36 | 342 | 8.66e-29 | 115 |
MS.gene25582.t1 | MTR_3g019390 | 28.296 | 311 | 184 | 10 | 3 | 278 | 33 | 339 | 9.47e-29 | 115 |
MS.gene25582.t1 | MTR_3g019580 | 29.126 | 309 | 182 | 9 | 3 | 278 | 46 | 350 | 9.82e-29 | 115 |
MS.gene25582.t1 | MTR_4g098890 | 32.154 | 311 | 162 | 13 | 3 | 274 | 611 | 911 | 1.04e-28 | 115 |
MS.gene25582.t1 | MTR_1g052880 | 29.870 | 308 | 172 | 8 | 9 | 274 | 36 | 341 | 1.16e-28 | 115 |
MS.gene25582.t1 | MTR_5g055070 | 32.166 | 314 | 161 | 14 | 4 | 274 | 27 | 331 | 1.45e-28 | 115 |
MS.gene25582.t1 | MTR_3g019390 | 28.296 | 311 | 184 | 10 | 3 | 278 | 33 | 339 | 1.51e-28 | 115 |
MS.gene25582.t1 | MTR_5g055070 | 32.372 | 312 | 163 | 14 | 4 | 274 | 27 | 331 | 1.64e-28 | 115 |
MS.gene25582.t1 | MTR_5g055070 | 32.166 | 314 | 161 | 14 | 4 | 274 | 27 | 331 | 1.72e-28 | 114 |
MS.gene25582.t1 | MTR_0280s0040 | 31.034 | 319 | 167 | 13 | 3 | 278 | 34 | 342 | 1.79e-28 | 114 |
MS.gene25582.t1 | MTR_2g089440 | 30.990 | 313 | 176 | 10 | 3 | 278 | 36 | 345 | 1.80e-28 | 114 |
MS.gene25582.t1 | MTR_3g019420 | 29.355 | 310 | 178 | 11 | 5 | 278 | 35 | 339 | 2.29e-28 | 114 |
MS.gene25582.t1 | MTR_8g465580 | 32.075 | 318 | 163 | 12 | 3 | 278 | 31 | 337 | 6.81e-28 | 112 |
MS.gene25582.t1 | MTR_3g007630 | 32.919 | 322 | 158 | 15 | 3 | 274 | 33 | 346 | 1.45e-27 | 112 |
MS.gene25582.t1 | MTR_7g056667 | 31.111 | 315 | 167 | 12 | 3 | 278 | 32 | 335 | 1.51e-27 | 112 |
MS.gene25582.t1 | MTR_8g465410 | 31.761 | 318 | 164 | 12 | 3 | 278 | 31 | 337 | 2.77e-27 | 111 |
MS.gene25582.t1 | MTR_7g056680 | 29.260 | 311 | 178 | 10 | 3 | 278 | 34 | 337 | 2.77e-27 | 111 |
MS.gene25582.t1 | MTR_7g056680 | 29.260 | 311 | 178 | 10 | 3 | 278 | 34 | 337 | 2.80e-27 | 111 |
MS.gene25582.t1 | MTR_7g056680 | 29.260 | 311 | 178 | 10 | 3 | 278 | 34 | 337 | 2.98e-27 | 111 |
MS.gene25582.t1 | MTR_7g056680 | 29.260 | 311 | 178 | 10 | 3 | 278 | 34 | 337 | 3.23e-27 | 111 |
MS.gene25582.t1 | MTR_8g465990 | 32.258 | 310 | 170 | 12 | 1 | 274 | 32 | 337 | 4.25e-27 | 110 |
MS.gene25582.t1 | MTR_7g056663 | 29.967 | 307 | 173 | 11 | 3 | 274 | 34 | 333 | 4.95e-27 | 110 |
MS.gene25582.t1 | MTR_8g465990 | 32.581 | 310 | 169 | 12 | 1 | 274 | 32 | 337 | 5.01e-27 | 110 |
MS.gene25582.t1 | MTR_8g465990 | 32.258 | 310 | 170 | 12 | 1 | 274 | 32 | 337 | 5.88e-27 | 110 |
MS.gene25582.t1 | MTR_3g007590 | 32.036 | 334 | 152 | 15 | 3 | 277 | 33 | 350 | 6.32e-27 | 108 |
MS.gene25582.t1 | MTR_3g019490 | 30.794 | 315 | 165 | 13 | 3 | 278 | 36 | 336 | 6.74e-27 | 110 |
MS.gene25582.t1 | MTR_3g007510 | 32.931 | 331 | 153 | 17 | 3 | 277 | 32 | 349 | 9.14e-27 | 109 |
MS.gene25582.t1 | MTR_3g007510 | 32.931 | 331 | 153 | 17 | 3 | 277 | 32 | 349 | 9.22e-27 | 109 |
MS.gene25582.t1 | MTR_3g007510 | 32.931 | 331 | 153 | 17 | 3 | 277 | 32 | 349 | 1.06e-26 | 109 |
MS.gene25582.t1 | MTR_4g081655 | 29.721 | 323 | 173 | 11 | 1 | 279 | 64 | 376 | 1.84e-26 | 108 |
MS.gene25582.t1 | MTR_2g081500 | 27.937 | 315 | 180 | 9 | 2 | 278 | 32 | 337 | 2.18e-26 | 108 |
MS.gene25582.t1 | MTR_4g081655 | 29.721 | 323 | 173 | 11 | 1 | 279 | 29 | 341 | 2.22e-26 | 108 |
MS.gene25582.t1 | MTR_4g091800 | 28.165 | 316 | 181 | 12 | 1 | 274 | 46 | 357 | 2.36e-26 | 108 |
MS.gene25582.t1 | MTR_4g091670 | 30.312 | 320 | 172 | 12 | 3 | 278 | 34 | 346 | 2.50e-26 | 108 |
MS.gene25582.t1 | MTR_4g091820 | 28.165 | 316 | 181 | 12 | 1 | 274 | 46 | 357 | 2.66e-26 | 108 |
MS.gene25582.t1 | MTR_4g081655 | 29.721 | 323 | 173 | 11 | 1 | 279 | 64 | 376 | 2.66e-26 | 108 |
MS.gene25582.t1 | MTR_4g091670 | 30.312 | 320 | 172 | 12 | 3 | 278 | 34 | 346 | 2.70e-26 | 108 |
MS.gene25582.t1 | MTR_3g007650 | 32.188 | 320 | 169 | 12 | 3 | 277 | 34 | 350 | 2.95e-26 | 108 |
MS.gene25582.t1 | MTR_4g091670 | 30.312 | 320 | 172 | 12 | 3 | 278 | 34 | 346 | 3.26e-26 | 108 |
MS.gene25582.t1 | MTR_7g056623 | 30.065 | 306 | 170 | 12 | 9 | 278 | 20 | 317 | 3.50e-26 | 108 |
MS.gene25582.t1 | MTR_8g465470 | 28.435 | 313 | 174 | 10 | 1 | 273 | 61 | 363 | 3.51e-26 | 108 |
MS.gene25582.t1 | MTR_6g012810 | 31.210 | 314 | 170 | 13 | 1 | 274 | 129 | 436 | 4.33e-26 | 107 |
MS.gene25582.t1 | MTR_2g011160 | 31.410 | 312 | 173 | 13 | 3 | 278 | 33 | 339 | 4.36e-26 | 107 |
MS.gene25582.t1 | MTR_2g089290 | 29.530 | 298 | 175 | 9 | 8 | 274 | 39 | 332 | 4.69e-26 | 107 |
MS.gene25582.t1 | MTR_6g012810 | 31.210 | 314 | 170 | 13 | 1 | 274 | 129 | 436 | 4.82e-26 | 107 |
MS.gene25582.t1 | MTR_2g011160 | 31.410 | 312 | 173 | 13 | 3 | 278 | 33 | 339 | 4.97e-26 | 107 |
MS.gene25582.t1 | MTR_4g081675 | 30.675 | 326 | 166 | 14 | 1 | 279 | 27 | 339 | 5.37e-26 | 107 |
MS.gene25582.t1 | MTR_8g465980 | 33.117 | 308 | 165 | 14 | 1 | 274 | 27 | 327 | 6.46e-26 | 107 |
MS.gene25582.t1 | MTR_0090s0020 | 32.039 | 309 | 166 | 13 | 3 | 274 | 29 | 330 | 7.91e-26 | 107 |
MS.gene25582.t1 | MTR_0090s0020 | 32.039 | 309 | 166 | 13 | 3 | 274 | 29 | 330 | 8.60e-26 | 107 |
MS.gene25582.t1 | MTR_0090s0020 | 32.039 | 309 | 166 | 13 | 3 | 274 | 29 | 330 | 9.77e-26 | 106 |
MS.gene25582.t1 | MTR_7g056617 | 30.128 | 312 | 174 | 13 | 3 | 278 | 40 | 343 | 1.01e-25 | 106 |
MS.gene25582.t1 | MTR_4g081640 | 30.581 | 327 | 163 | 12 | 3 | 279 | 31 | 343 | 1.04e-25 | 106 |
MS.gene25582.t1 | MTR_0090s0020 | 32.039 | 309 | 166 | 13 | 3 | 274 | 29 | 330 | 1.12e-25 | 106 |
MS.gene25582.t1 | MTR_7g056647 | 29.677 | 310 | 178 | 11 | 3 | 278 | 40 | 343 | 1.13e-25 | 106 |
MS.gene25582.t1 | MTR_1g033510 | 33.708 | 267 | 138 | 11 | 20 | 275 | 1 | 239 | 1.27e-25 | 103 |
MS.gene25582.t1 | MTR_8g030500 | 27.759 | 299 | 179 | 8 | 10 | 274 | 26 | 321 | 1.46e-25 | 106 |
MS.gene25582.t1 | MTR_8g465510 | 31.544 | 298 | 162 | 12 | 16 | 274 | 42 | 336 | 1.47e-25 | 106 |
MS.gene25582.t1 | MTR_3g020330 | 29.032 | 310 | 181 | 10 | 3 | 278 | 36 | 340 | 2.54e-25 | 105 |
MS.gene25582.t1 | MTR_3g020280 | 27.532 | 316 | 183 | 10 | 3 | 278 | 33 | 342 | 2.71e-25 | 105 |
MS.gene25582.t1 | MTR_3g051420 | 29.450 | 309 | 180 | 12 | 3 | 278 | 38 | 341 | 2.94e-25 | 105 |
MS.gene25582.t1 | MTR_4g081650 | 29.936 | 314 | 172 | 10 | 3 | 278 | 32 | 335 | 3.13e-25 | 105 |
MS.gene25582.t1 | MTR_4g081685 | 28.308 | 325 | 174 | 12 | 1 | 279 | 29 | 340 | 6.58e-25 | 104 |
MS.gene25582.t1 | MTR_2g081470 | 29.355 | 310 | 182 | 9 | 2 | 278 | 29 | 334 | 6.81e-25 | 104 |
MS.gene25582.t1 | MTR_4g091760 | 27.848 | 316 | 183 | 12 | 1 | 274 | 29 | 341 | 8.33e-25 | 104 |
MS.gene25582.t1 | MTR_5g067250 | 30.132 | 302 | 168 | 11 | 10 | 274 | 43 | 338 | 1.30e-24 | 103 |
MS.gene25582.t1 | MTR_7g056640 | 29.560 | 318 | 168 | 13 | 3 | 278 | 62 | 365 | 3.34e-24 | 102 |
MS.gene25582.t1 | MTR_7g056420 | 28.981 | 314 | 175 | 13 | 3 | 278 | 372 | 675 | 3.78e-24 | 102 |
MS.gene25582.t1 | MTR_4g091840 | 27.329 | 322 | 176 | 11 | 1 | 274 | 46 | 357 | 3.88e-24 | 102 |
MS.gene25582.t1 | MTR_7g056430 | 28.981 | 314 | 175 | 13 | 3 | 278 | 372 | 675 | 4.23e-24 | 102 |
MS.gene25582.t1 | MTR_4g091860 | 31.776 | 321 | 175 | 13 | 1 | 279 | 26 | 344 | 1.98e-23 | 100 |
MS.gene25582.t1 | MTR_2g081520 | 27.707 | 314 | 182 | 8 | 2 | 278 | 29 | 334 | 3.31e-23 | 99.4 |
MS.gene25582.t1 | MTR_2g081520 | 27.707 | 314 | 182 | 8 | 2 | 278 | 29 | 334 | 3.36e-23 | 99.4 |
MS.gene25582.t1 | MTR_2g081520 | 27.707 | 314 | 182 | 8 | 2 | 278 | 29 | 334 | 3.58e-23 | 99.4 |
MS.gene25582.t1 | MTR_5g067290 | 30.420 | 286 | 172 | 12 | 10 | 274 | 44 | 323 | 3.80e-23 | 98.2 |
MS.gene25582.t1 | MTR_2g081520 | 27.707 | 314 | 182 | 8 | 2 | 278 | 29 | 334 | 3.83e-23 | 99.4 |
MS.gene25582.t1 | MTR_2g081520 | 27.707 | 314 | 182 | 8 | 2 | 278 | 29 | 334 | 4.05e-23 | 99.4 |
MS.gene25582.t1 | MTR_2g081520 | 27.707 | 314 | 182 | 8 | 2 | 278 | 29 | 334 | 4.48e-23 | 99.0 |
MS.gene25582.t1 | MTR_7g056510 | 29.524 | 315 | 172 | 13 | 3 | 278 | 34 | 337 | 4.79e-23 | 98.6 |
MS.gene25582.t1 | MTR_4g091690 | 27.215 | 316 | 181 | 11 | 3 | 274 | 53 | 363 | 5.40e-23 | 99.0 |
MS.gene25582.t1 | MTR_7g056510 | 29.524 | 315 | 172 | 13 | 3 | 278 | 34 | 337 | 5.85e-23 | 98.6 |
MS.gene25582.t1 | MTR_4g081730 | 29.063 | 320 | 179 | 13 | 1 | 279 | 27 | 339 | 6.04e-23 | 98.6 |
MS.gene25582.t1 | MTR_7g056510 | 29.781 | 319 | 166 | 14 | 3 | 278 | 24 | 327 | 6.14e-23 | 98.6 |
MS.gene25582.t1 | MTR_7g056510 | 29.524 | 315 | 172 | 13 | 3 | 278 | 34 | 337 | 8.13e-23 | 98.2 |
MS.gene25582.t1 | MTR_7g056510 | 29.524 | 315 | 172 | 13 | 3 | 278 | 34 | 337 | 8.63e-23 | 98.2 |
MS.gene25582.t1 | MTR_4g091780 | 26.899 | 316 | 186 | 10 | 1 | 274 | 35 | 347 | 1.13e-22 | 97.8 |
MS.gene25582.t1 | MTR_2g011190 | 28.939 | 311 | 166 | 13 | 9 | 278 | 43 | 339 | 1.35e-22 | 97.8 |
MS.gene25582.t1 | MTR_8g465570 | 28.289 | 304 | 167 | 11 | 1 | 263 | 30 | 323 | 1.79e-22 | 97.4 |
MS.gene25582.t1 | MTR_7g056450 | 28.754 | 313 | 172 | 14 | 3 | 278 | 43 | 341 | 2.60e-22 | 96.7 |
MS.gene25582.t1 | MTR_7g056450 | 28.754 | 313 | 172 | 14 | 3 | 278 | 33 | 331 | 3.50e-22 | 96.7 |
MS.gene25582.t1 | MTR_2g011340 | 27.619 | 315 | 182 | 10 | 3 | 278 | 38 | 345 | 1.09e-21 | 95.1 |
MS.gene25582.t1 | MTR_4g091850 | 27.103 | 321 | 178 | 12 | 3 | 276 | 47 | 358 | 1.89e-21 | 94.4 |
MS.gene25582.t1 | MTR_6g471820 | 29.954 | 217 | 120 | 6 | 93 | 278 | 38 | 253 | 2.50e-21 | 93.6 |
MS.gene25582.t1 | MTR_3g019390 | 28.163 | 245 | 140 | 8 | 68 | 278 | 7 | 249 | 2.96e-21 | 93.6 |
MS.gene25582.t1 | MTR_2g011180 | 28.616 | 318 | 172 | 12 | 3 | 274 | 34 | 342 | 6.90e-21 | 92.8 |
MS.gene25582.t1 | MTR_2g011180 | 28.616 | 318 | 172 | 12 | 3 | 274 | 34 | 342 | 6.91e-21 | 92.8 |
MS.gene25582.t1 | MTR_0148s0080 | 26.364 | 330 | 173 | 10 | 1 | 274 | 31 | 346 | 1.05e-20 | 92.4 |
MS.gene25582.t1 | MTR_2g011210 | 29.167 | 312 | 165 | 13 | 9 | 278 | 48 | 345 | 1.28e-20 | 92.0 |
MS.gene25582.t1 | MTR_4g040480 | 29.618 | 314 | 161 | 13 | 9 | 278 | 39 | 336 | 4.81e-20 | 90.1 |
MS.gene25582.t1 | MTR_4g091680 | 34.104 | 173 | 98 | 5 | 5 | 164 | 57 | 226 | 3.71e-19 | 87.4 |
MS.gene25582.t1 | MTR_2g011270 | 26.948 | 308 | 181 | 10 | 5 | 274 | 18 | 319 | 4.50e-19 | 87.4 |
MS.gene25582.t1 | MTR_8g013610 | 26.403 | 303 | 186 | 9 | 3 | 274 | 37 | 333 | 1.54e-18 | 85.9 |
MS.gene25582.t1 | MTR_8g013560 | 27.869 | 305 | 179 | 10 | 3 | 274 | 36 | 332 | 1.78e-18 | 85.5 |
MS.gene25582.t1 | MTR_8g013600 | 27.393 | 303 | 179 | 11 | 9 | 278 | 42 | 336 | 3.49e-18 | 84.7 |
MS.gene25582.t1 | MTR_2g011280 | 27.445 | 317 | 173 | 11 | 3 | 274 | 37 | 341 | 1.07e-17 | 83.2 |
MS.gene25582.t1 | MTR_7g092050 | 28.716 | 296 | 157 | 12 | 4 | 261 | 37 | 316 | 1.82e-17 | 82.4 |
MS.gene25582.t1 | MTR_8g013620 | 27.922 | 308 | 178 | 11 | 3 | 274 | 37 | 336 | 2.75e-17 | 82.0 |
MS.gene25582.t1 | MTR_8g013620 | 27.922 | 308 | 178 | 11 | 3 | 274 | 37 | 336 | 2.90e-17 | 82.0 |
MS.gene25582.t1 | MTR_3g102400 | 26.460 | 291 | 177 | 9 | 9 | 266 | 39 | 325 | 3.14e-17 | 82.0 |
MS.gene25582.t1 | MTR_8g013620 | 27.922 | 308 | 178 | 11 | 3 | 274 | 37 | 336 | 3.16e-17 | 81.6 |
MS.gene25582.t1 | MTR_8g013620 | 27.922 | 308 | 178 | 11 | 3 | 274 | 37 | 336 | 3.78e-17 | 81.6 |
MS.gene25582.t1 | MTR_2g011240 | 28.308 | 325 | 164 | 14 | 5 | 278 | 18 | 324 | 3.86e-17 | 81.6 |
MS.gene25582.t1 | MTR_8g013580 | 25.574 | 305 | 187 | 10 | 3 | 274 | 43 | 340 | 1.18e-16 | 80.1 |
MS.gene25582.t1 | MTR_2g011230 | 26.332 | 319 | 179 | 13 | 1 | 274 | 27 | 334 | 1.45e-14 | 73.9 |
MS.gene25582.t1 | MTR_3g031580 | 28.421 | 285 | 173 | 11 | 9 | 266 | 36 | 316 | 2.76e-14 | 73.2 |
MS.gene25582.t1 | MTR_7g056537 | 32.716 | 162 | 90 | 7 | 9 | 158 | 136 | 290 | 7.42e-13 | 68.2 |
MS.gene25582.t1 | MTR_7g058550 | 26.102 | 295 | 174 | 12 | 9 | 266 | 41 | 328 | 1.55e-12 | 67.8 |
MS.gene25582.t1 | MTR_8g442310 | 36.154 | 130 | 76 | 5 | 8 | 133 | 12 | 138 | 1.83e-12 | 67.8 |
MS.gene25582.t1 | MTR_4g114250 | 32.051 | 156 | 98 | 4 | 12 | 164 | 54 | 204 | 2.24e-12 | 67.4 |
MS.gene25582.t1 | MTR_8g442340 | 37.795 | 127 | 72 | 5 | 11 | 133 | 51 | 174 | 2.43e-12 | 67.4 |
MS.gene25582.t1 | MTR_4g114270 | 31.613 | 155 | 98 | 4 | 13 | 164 | 55 | 204 | 6.07e-12 | 66.2 |
MS.gene25582.t1 | MTR_8g051540 | 35.821 | 134 | 79 | 5 | 4 | 133 | 47 | 177 | 2.84e-11 | 63.9 |
MS.gene25582.t1 | MTR_8g442270 | 33.537 | 164 | 94 | 7 | 2 | 154 | 42 | 201 | 6.08e-11 | 63.2 |
MS.gene25582.t1 | MTR_3g031490 | 27.907 | 301 | 163 | 14 | 9 | 266 | 33 | 322 | 7.55e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25582.t1 | AT1G61610 | 28.296 | 311 | 182 | 8 | 3 | 274 | 36 | 344 | 1.33e-33 | 129 |
MS.gene25582.t1 | AT1G61610 | 28.296 | 311 | 182 | 8 | 3 | 274 | 36 | 344 | 1.48e-33 | 129 |
MS.gene25582.t1 | AT4G11900 | 33.945 | 327 | 151 | 12 | 9 | 274 | 40 | 362 | 3.48e-33 | 128 |
MS.gene25582.t1 | AT4G11900 | 33.945 | 327 | 151 | 12 | 9 | 274 | 40 | 362 | 3.48e-33 | 128 |
MS.gene25582.t1 | AT4G11900 | 34.557 | 327 | 149 | 13 | 9 | 274 | 40 | 362 | 4.10e-33 | 128 |
MS.gene25582.t1 | AT4G11900 | 34.557 | 327 | 149 | 13 | 9 | 274 | 40 | 362 | 4.99e-33 | 127 |
MS.gene25582.t1 | AT4G11900 | 34.557 | 327 | 149 | 13 | 9 | 274 | 40 | 362 | 4.99e-33 | 127 |
MS.gene25582.t1 | AT4G11900 | 34.557 | 327 | 149 | 13 | 9 | 274 | 40 | 362 | 5.78e-33 | 127 |
MS.gene25582.t1 | AT4G11900 | 34.557 | 327 | 149 | 13 | 9 | 274 | 40 | 362 | 5.78e-33 | 127 |
MS.gene25582.t1 | AT4G11900 | 33.945 | 327 | 151 | 12 | 9 | 274 | 40 | 362 | 5.78e-33 | 127 |
MS.gene25582.t1 | AT2G19130 | 32.468 | 308 | 164 | 12 | 10 | 278 | 37 | 339 | 1.09e-31 | 124 |
MS.gene25582.t1 | AT1G11280 | 31.596 | 307 | 169 | 9 | 7 | 279 | 38 | 337 | 1.15e-31 | 124 |
MS.gene25582.t1 | AT1G11280 | 31.596 | 307 | 169 | 9 | 7 | 279 | 38 | 337 | 1.30e-31 | 124 |
MS.gene25582.t1 | AT1G11280 | 31.596 | 307 | 169 | 9 | 7 | 279 | 48 | 347 | 1.39e-31 | 124 |
MS.gene25582.t1 | AT1G11280 | 31.596 | 307 | 169 | 9 | 7 | 279 | 48 | 347 | 1.44e-31 | 124 |
MS.gene25582.t1 | AT1G11280 | 31.596 | 307 | 169 | 9 | 7 | 279 | 38 | 337 | 1.53e-31 | 124 |
MS.gene25582.t1 | AT1G65790 | 31.148 | 305 | 168 | 10 | 10 | 279 | 43 | 340 | 5.08e-31 | 121 |
MS.gene25582.t1 | AT1G65790 | 31.148 | 305 | 168 | 10 | 10 | 279 | 43 | 340 | 5.08e-31 | 121 |
MS.gene25582.t1 | AT4G21380 | 30.573 | 314 | 178 | 10 | 3 | 279 | 36 | 346 | 7.86e-31 | 121 |
MS.gene25582.t1 | AT1G65790 | 31.148 | 305 | 168 | 10 | 10 | 279 | 43 | 340 | 8.68e-31 | 121 |
MS.gene25582.t1 | AT4G21380 | 30.392 | 306 | 175 | 9 | 9 | 279 | 44 | 346 | 1.05e-30 | 121 |
MS.gene25582.t1 | AT4G03230 | 28.475 | 295 | 180 | 7 | 9 | 274 | 42 | 334 | 1.76e-29 | 117 |
MS.gene25582.t1 | AT4G03230 | 29.153 | 295 | 178 | 8 | 9 | 274 | 42 | 334 | 1.90e-29 | 117 |
MS.gene25582.t1 | AT4G03230 | 29.153 | 295 | 178 | 8 | 9 | 274 | 42 | 334 | 1.90e-29 | 117 |
MS.gene25582.t1 | AT1G11350 | 31.373 | 306 | 170 | 11 | 6 | 274 | 32 | 334 | 2.21e-29 | 117 |
MS.gene25582.t1 | AT1G11330 | 30.547 | 311 | 169 | 12 | 8 | 278 | 44 | 347 | 4.11e-29 | 116 |
MS.gene25582.t1 | AT1G11330 | 30.619 | 307 | 166 | 12 | 8 | 274 | 44 | 343 | 4.12e-29 | 116 |
MS.gene25582.t1 | AT1G11330 | 30.619 | 307 | 166 | 12 | 8 | 274 | 44 | 343 | 4.36e-29 | 116 |
MS.gene25582.t1 | AT1G61390 | 31.833 | 311 | 164 | 12 | 7 | 279 | 52 | 352 | 8.15e-28 | 112 |
MS.gene25582.t1 | AT3G12000 | 31.494 | 308 | 171 | 10 | 10 | 278 | 48 | 354 | 1.06e-27 | 111 |
MS.gene25582.t1 | AT4G27290 | 29.712 | 313 | 180 | 9 | 3 | 278 | 31 | 340 | 1.84e-27 | 112 |
MS.gene25582.t1 | AT4G27290 | 29.712 | 313 | 180 | 9 | 3 | 278 | 31 | 340 | 2.09e-27 | 111 |
MS.gene25582.t1 | AT4G11900 | 34.354 | 294 | 130 | 12 | 40 | 274 | 4 | 293 | 2.52e-27 | 111 |
MS.gene25582.t1 | AT4G11900 | 34.354 | 294 | 130 | 12 | 40 | 274 | 4 | 293 | 2.74e-27 | 111 |
MS.gene25582.t1 | AT1G61380 | 30.968 | 310 | 168 | 12 | 7 | 279 | 31 | 331 | 3.17e-27 | 111 |
MS.gene25582.t1 | AT1G11300 | 30.844 | 308 | 165 | 13 | 8 | 274 | 39 | 339 | 4.82e-27 | 110 |
MS.gene25582.t1 | AT1G11300 | 30.844 | 308 | 165 | 13 | 8 | 274 | 39 | 339 | 5.49e-27 | 110 |
MS.gene25582.t1 | AT4G00340 | 29.487 | 312 | 167 | 12 | 5 | 276 | 27 | 325 | 1.95e-25 | 105 |
MS.gene25582.t1 | AT4G00340 | 29.487 | 312 | 167 | 12 | 5 | 276 | 27 | 325 | 1.95e-25 | 105 |
MS.gene25582.t1 | AT1G61490 | 29.967 | 307 | 171 | 12 | 7 | 278 | 34 | 331 | 3.17e-25 | 105 |
MS.gene25582.t1 | AT1G61490 | 29.967 | 307 | 171 | 12 | 7 | 278 | 34 | 331 | 3.17e-25 | 105 |
MS.gene25582.t1 | AT1G61490 | 29.967 | 307 | 171 | 12 | 7 | 278 | 34 | 331 | 3.17e-25 | 105 |
MS.gene25582.t1 | AT1G61490 | 29.967 | 307 | 171 | 12 | 7 | 278 | 34 | 331 | 3.17e-25 | 105 |
MS.gene25582.t1 | AT1G61480 | 29.642 | 307 | 172 | 12 | 7 | 278 | 34 | 331 | 3.27e-25 | 105 |
MS.gene25582.t1 | AT1G61360 | 32.248 | 307 | 168 | 10 | 7 | 279 | 30 | 330 | 4.41e-25 | 105 |
MS.gene25582.t1 | AT1G65800 | 30.844 | 308 | 169 | 10 | 10 | 279 | 43 | 344 | 5.48e-25 | 104 |
MS.gene25582.t1 | AT1G65800 | 30.844 | 308 | 169 | 10 | 10 | 279 | 43 | 344 | 6.21e-25 | 104 |
MS.gene25582.t1 | AT1G61420 | 30.421 | 309 | 167 | 12 | 7 | 278 | 34 | 331 | 9.64e-25 | 103 |
MS.gene25582.t1 | AT1G61420 | 30.421 | 309 | 167 | 12 | 7 | 278 | 34 | 331 | 9.64e-25 | 103 |
MS.gene25582.t1 | AT1G11303 | 29.073 | 313 | 164 | 13 | 8 | 274 | 39 | 339 | 1.01e-24 | 103 |
MS.gene25582.t1 | AT1G61420 | 30.421 | 309 | 167 | 12 | 7 | 278 | 34 | 331 | 1.02e-24 | 103 |
MS.gene25582.t1 | AT1G61460 | 29.787 | 282 | 169 | 9 | 7 | 278 | 35 | 297 | 5.62e-24 | 101 |
MS.gene25582.t1 | AT4G21390 | 28.947 | 304 | 162 | 13 | 11 | 268 | 44 | 339 | 1.09e-23 | 100 |
MS.gene25582.t1 | AT4G21390 | 28.947 | 304 | 162 | 13 | 11 | 268 | 44 | 339 | 1.34e-23 | 100 |
MS.gene25582.t1 | AT1G61400 | 30.164 | 305 | 173 | 10 | 7 | 278 | 44 | 341 | 2.33e-23 | 100 |
MS.gene25582.t1 | AT1G61400 | 30.164 | 305 | 173 | 10 | 7 | 278 | 44 | 341 | 2.62e-23 | 99.8 |
MS.gene25582.t1 | AT1G61490 | 28.428 | 299 | 160 | 10 | 7 | 278 | 34 | 305 | 4.32e-23 | 99.4 |
MS.gene25582.t1 | AT1G61490 | 28.428 | 299 | 160 | 10 | 7 | 278 | 34 | 305 | 4.32e-23 | 99.4 |
MS.gene25582.t1 | AT1G11410 | 28.205 | 312 | 182 | 11 | 3 | 276 | 29 | 336 | 7.20e-23 | 98.6 |
MS.gene25582.t1 | AT1G11410 | 29.167 | 312 | 179 | 12 | 3 | 276 | 36 | 343 | 7.86e-23 | 98.6 |
MS.gene25582.t1 | AT1G11410 | 28.846 | 312 | 180 | 12 | 3 | 276 | 5 | 312 | 2.35e-22 | 97.1 |
MS.gene25582.t1 | AT1G11340 | 28.344 | 314 | 185 | 12 | 3 | 279 | 94 | 404 | 1.77e-21 | 94.4 |
MS.gene25582.t1 | AT1G11340 | 28.344 | 314 | 185 | 12 | 3 | 279 | 26 | 336 | 1.81e-21 | 94.4 |
MS.gene25582.t1 | AT1G11340 | 28.344 | 314 | 185 | 12 | 3 | 279 | 94 | 404 | 2.18e-21 | 94.4 |
MS.gene25582.t1 | AT4G03230 | 28.736 | 261 | 148 | 10 | 50 | 274 | 4 | 262 | 3.70e-21 | 93.6 |
MS.gene25582.t1 | AT1G61440 | 28.013 | 307 | 177 | 11 | 7 | 278 | 27 | 324 | 1.21e-20 | 92.0 |
MS.gene25582.t1 | AT1G61500 | 29.085 | 306 | 175 | 12 | 7 | 278 | 17 | 314 | 1.23e-20 | 92.0 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 43 | 339 | 1.27e-20 | 91.7 |
MS.gene25582.t1 | AT1G61550 | 28.664 | 307 | 175 | 12 | 7 | 278 | 29 | 326 | 1.31e-20 | 92.0 |
MS.gene25582.t1 | AT1G61440 | 28.013 | 307 | 177 | 11 | 7 | 278 | 27 | 324 | 1.35e-20 | 92.0 |
MS.gene25582.t1 | AT1G61440 | 28.013 | 307 | 177 | 11 | 7 | 278 | 27 | 324 | 1.44e-20 | 91.7 |
MS.gene25582.t1 | AT1G61500 | 29.085 | 306 | 175 | 12 | 7 | 278 | 35 | 332 | 1.45e-20 | 91.7 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 11 | 307 | 1.46e-20 | 91.7 |
MS.gene25582.t1 | AT1G61500 | 29.085 | 306 | 175 | 12 | 7 | 278 | 40 | 337 | 1.54e-20 | 91.7 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 34 | 330 | 1.71e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 34 | 330 | 1.71e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 34 | 330 | 2.10e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 34 | 330 | 2.14e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 11 | 307 | 2.28e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 34 | 330 | 2.31e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 11 | 307 | 2.33e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 11 | 307 | 2.33e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 11 | 307 | 2.33e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 34 | 330 | 2.38e-20 | 91.3 |
MS.gene25582.t1 | AT1G61430 | 28.526 | 312 | 168 | 12 | 7 | 278 | 34 | 330 | 2.38e-20 | 91.3 |
MS.gene25582.t1 | AT1G61370 | 28.296 | 311 | 176 | 13 | 7 | 279 | 35 | 336 | 3.39e-17 | 82.0 |
MS.gene25582.t1 | AT5G39370 | 39.496 | 119 | 62 | 4 | 45 | 153 | 8 | 126 | 4.53e-14 | 68.2 |
MS.gene25582.t1 | AT5G18470 | 33.333 | 180 | 99 | 6 | 2 | 161 | 36 | 214 | 8.07e-14 | 71.2 |
MS.gene25582.t1 | AT1G61360 | 29.365 | 252 | 140 | 9 | 62 | 279 | 2 | 249 | 1.97e-13 | 70.5 |
MS.gene25582.t1 | AT1G61360 | 29.365 | 252 | 140 | 9 | 62 | 279 | 2 | 249 | 1.97e-13 | 70.5 |
MS.gene25582.t1 | AT1G61360 | 29.365 | 252 | 140 | 9 | 62 | 279 | 2 | 249 | 1.97e-13 | 70.5 |
MS.gene25582.t1 | AT3G16030 | 32.370 | 173 | 92 | 6 | 2 | 158 | 30 | 193 | 3.55e-13 | 70.1 |
MS.gene25582.t1 | AT4G27300 | 27.508 | 309 | 174 | 15 | 9 | 274 | 38 | 339 | 7.77e-13 | 68.9 |
MS.gene25582.t1 | AT3G16030 | 32.609 | 184 | 88 | 8 | 2 | 158 | 30 | 204 | 7.93e-13 | 68.9 |
MS.gene25582.t1 | AT3G16030 | 32.609 | 184 | 88 | 8 | 2 | 158 | 30 | 204 | 7.93e-13 | 68.9 |
MS.gene25582.t1 | AT3G16030 | 32.609 | 184 | 88 | 8 | 2 | 158 | 30 | 204 | 7.93e-13 | 68.9 |
MS.gene25582.t1 | AT3G16030 | 32.609 | 184 | 88 | 8 | 2 | 158 | 30 | 204 | 8.80e-13 | 68.6 |
MS.gene25582.t1 | AT3G16030 | 32.609 | 184 | 88 | 8 | 2 | 158 | 30 | 204 | 9.09e-13 | 68.6 |
MS.gene25582.t1 | AT3G16030 | 32.609 | 184 | 88 | 8 | 2 | 158 | 30 | 204 | 1.10e-12 | 68.6 |
MS.gene25582.t1 | AT1G67520 | 30.994 | 171 | 98 | 7 | 2 | 156 | 30 | 196 | 5.27e-11 | 63.2 |
MS.gene25582.t1 | AT1G67520 | 30.994 | 171 | 98 | 7 | 2 | 156 | 37 | 203 | 7.51e-11 | 62.8 |
MS.gene25582.t1 | AT1G67520 | 30.994 | 171 | 98 | 7 | 2 | 156 | 30 | 196 | 8.12e-11 | 62.8 |
MS.gene25582.t1 | AT1G67520 | 30.994 | 171 | 98 | 7 | 2 | 156 | 30 | 196 | 8.21e-11 | 62.8 |
MS.gene25582.t1 | AT1G67520 | 30.994 | 171 | 98 | 7 | 2 | 156 | 30 | 196 | 8.95e-11 | 62.8 |
Find 70 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACTATTGCTGTTCTGATTTC+CGG | 0.188385 | 8.2:+43803707 | None:intergenic |
CGTTTGATATTGGAAGCTTA+TGG | 0.190419 | 8.2:-43803363 | MS.gene25582:CDS |
ACTCTTCAACTTGTTGATTC+TGG | 0.244710 | 8.2:-43803498 | MS.gene25582:CDS |
TAGATTCCTCTGACCAGTTT+TGG | 0.272515 | 8.2:+43803328 | None:intergenic |
CGTAGGTATAAGGTCTAAAA+AGG | 0.285355 | 8.2:-43803853 | MS.gene25582:CDS |
TAGCAATTCTCGTTTGATAT+TGG | 0.308135 | 8.2:-43803373 | MS.gene25582:CDS |
ACAGGTCAGCTGGATGTGTC+AGG | 0.308176 | 8.2:-43803155 | MS.gene25582:CDS |
CTAACCTGTTTGGATTGAAT+TGG | 0.312243 | 8.2:-43803431 | MS.gene25582:CDS |
AACCATCTGATGCTGATTCT+TGG | 0.328745 | 8.2:-43803188 | MS.gene25582:CDS |
TACGAAATGACAAGATTGTT+TGG | 0.329405 | 8.2:-43803830 | MS.gene25582:CDS |
TCAACAAGTTGAAGAGTATA+TGG | 0.336987 | 8.2:+43803504 | None:intergenic |
ACCATCTGATGCTGATTCTT+GGG | 0.343349 | 8.2:-43803187 | MS.gene25582:CDS |
TTGAATTGGAACGACGATAA+TGG | 0.351804 | 8.2:-43803417 | MS.gene25582:CDS |
GTTTGATATTGGAAGCTTAT+GGG | 0.356177 | 8.2:-43803362 | MS.gene25582:CDS |
GGTAACATTCGCCTCATAGA+TGG | 0.361608 | 8.2:-43803750 | MS.gene25582:CDS |
GGGATCTTAAATACCAAAAC+TGG | 0.379711 | 8.2:-43803341 | MS.gene25582:CDS |
TTGATTGACGCTAACCTGTT+TGG | 0.401901 | 8.2:-43803441 | MS.gene25582:CDS |
ACGAAATGACAAGATTGTTT+GGG | 0.411632 | 8.2:-43803829 | MS.gene25582:CDS |
CCCTGTACTACGTAGGTATA+AGG | 0.416795 | 8.2:-43803863 | MS.gene25582:CDS |
AAGAGCATGCGGATTATAGA+TGG | 0.427564 | 8.2:+43803242 | None:intergenic |
TTCAGACACATTTGTTTCAA+AGG | 0.439334 | 8.2:-43803934 | MS.gene25582:CDS |
CGTTCCAATTCAATCCAAAC+AGG | 0.445657 | 8.2:+43803427 | None:intergenic |
AACGCTGAGGAGGTAACAAA+TGG | 0.455656 | 8.2:+43803789 | None:intergenic |
AAACTTCGTTAATGCGATCA+TGG | 0.456651 | 8.2:-43803554 | MS.gene25582:CDS |
GACACATTTGTTTCAAAGGG+TGG | 0.465703 | 8.2:-43803930 | MS.gene25582:CDS |
ACCTTATACCTACGTAGTAC+AGG | 0.474023 | 8.2:+43803862 | None:intergenic |
TCAGACACATTTGTTTCAAA+GGG | 0.478634 | 8.2:-43803933 | MS.gene25582:CDS |
GTCAGAGGAATCTAAGAGTT+GGG | 0.484079 | 8.2:-43803319 | MS.gene25582:CDS |
ATTAATACGCACGAGGTGAC+CGG | 0.496714 | 8.2:-43803726 | MS.gene25582:CDS |
ATTCCTAGTAATGGGGCAAT+CGG | 0.505897 | 8.2:-43803964 | None:intergenic |
AAACGAGAATTGCTATCAGT+TGG | 0.506173 | 8.2:+43803381 | None:intergenic |
TGGTATCTACGCAACTCTCT+TGG | 0.507361 | 8.2:-43803682 | MS.gene25582:CDS |
AACTCTGCCACAAAATCGCT+TGG | 0.508495 | 8.2:+43803622 | None:intergenic |
AGTTGTTGTTCACCAGTACC+AGG | 0.514270 | 8.2:+43803649 | None:intergenic |
GCGTATTAATTCCATCTATG+AGG | 0.518691 | 8.2:+43803739 | None:intergenic |
TCCAGGCAAAAGGGTGTCTG+AGG | 0.524846 | 8.2:+43803590 | None:intergenic |
TCTCTTGGACACAGGAAACC+TGG | 0.526499 | 8.2:-43803667 | MS.gene25582:CDS |
AATCAGAACAGCAATAGTAT+TGG | 0.532762 | 8.2:-43803702 | MS.gene25582:CDS |
GGTCAGAGGAATCTAAGAGT+TGG | 0.534866 | 8.2:-43803320 | MS.gene25582:CDS |
AGAGTATATGGTCCCTCAGT+AGG | 0.535416 | 8.2:+43803516 | None:intergenic |
TTTGATATTGGAAGCTTATG+GGG | 0.544989 | 8.2:-43803361 | MS.gene25582:CDS |
GGACACAGGAAACCTGGTAC+TGG | 0.557743 | 8.2:-43803661 | MS.gene25582:CDS |
CCATCTGATGCTGATTCTTG+GGG | 0.558193 | 8.2:-43803186 | MS.gene25582:CDS |
GCGAATGTTACCATTGTGAA+TGG | 0.561889 | 8.2:+43803761 | None:intergenic |
TGAATTGTCTGTGACACACT+TGG | 0.567823 | 8.2:+43803278 | None:intergenic |
AACTTCGTTAATGCGATCAT+GGG | 0.570484 | 8.2:-43803553 | MS.gene25582:CDS |
AAGGGTGGAAACTACGAACT+AGG | 0.570574 | 8.2:-43803915 | MS.gene25582:CDS |
CCTTATACCTACGTAGTACA+GGG | 0.575206 | 8.2:+43803863 | None:intergenic |
GAGTATATGGTCCCTCAGTA+GGG | 0.578828 | 8.2:+43803517 | None:intergenic |
TACGCAACTCTCTTGGACAC+AGG | 0.579026 | 8.2:-43803675 | MS.gene25582:CDS |
CCAGGCAAAAGGGTGTCTGA+GGG | 0.579494 | 8.2:+43803591 | None:intergenic |
CCCCAAGAATCAGCATCAGA+TGG | 0.600662 | 8.2:+43803186 | None:intergenic |
GAGCCTTGTCAATGTCTCGA+TGG | 0.603577 | 8.2:-43803216 | MS.gene25582:CDS |
ACGCTGAGGAGGTAACAAAT+GGG | 0.606178 | 8.2:+43803790 | None:intergenic |
AATGGTTAGCAACGCTGAGG+AGG | 0.610318 | 8.2:+43803779 | None:intergenic |
CAGGTCAGCTGGATGTGTCA+GGG | 0.629197 | 8.2:-43803154 | MS.gene25582:CDS |
TAAATACCAAAACTGGTCAG+AGG | 0.640707 | 8.2:-43803334 | MS.gene25582:CDS |
CAAGGCTCAACAAGAGCATG+CGG | 0.658194 | 8.2:+43803231 | None:intergenic |
TGTGTCACAGACAATTCATG+TGG | 0.669541 | 8.2:-43803273 | MS.gene25582:CDS |
CATCTGATGCTGATTCTTGG+GGG | 0.669814 | 8.2:-43803185 | MS.gene25582:CDS |
AGTGAAGATGACCCTACTGA+GGG | 0.673304 | 8.2:-43803528 | MS.gene25582:CDS |
CAGGCAAAAGGGTGTCTGAG+GGG | 0.691073 | 8.2:+43803592 | None:intergenic |
GAGTGAAGATGACCCTACTG+AGG | 0.693092 | 8.2:-43803529 | MS.gene25582:CDS |
GTGAATGGTTAGCAACGCTG+AGG | 0.702768 | 8.2:+43803776 | None:intergenic |
AGGTAACAAATGGGTACACG+AGG | 0.706854 | 8.2:+43803799 | None:intergenic |
AGAGGAATCTAAGAGTTGGG+CGG | 0.708383 | 8.2:-43803316 | MS.gene25582:CDS |
GCGTTGCTAACCATTCACAA+TGG | 0.726213 | 8.2:-43803771 | MS.gene25582:CDS |
AACTCAACCCTGTACTACGT+AGG | 0.728830 | 8.2:-43803870 | MS.gene25582:CDS |
AAACCATCGAGACATTGACA+AGG | 0.732566 | 8.2:+43803213 | None:intergenic |
AGATGGAATTAATACGCACG+AGG | 0.740780 | 8.2:-43803733 | MS.gene25582:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
AATCAGAACAGCAATAGTAT+TGG | - | chr8.2:43803389-43803408 | MS.gene25582:CDS | 30.0% | |
ACGAAATGACAAGATTGTTT+GGG | - | chr8.2:43803262-43803281 | MS.gene25582:CDS | 30.0% | |
GTTTGATATTGGAAGCTTAT+GGG | - | chr8.2:43803729-43803748 | MS.gene25582:CDS | 30.0% | |
TACGAAATGACAAGATTGTT+TGG | - | chr8.2:43803261-43803280 | MS.gene25582:CDS | 30.0% | |
TAGCAATTCTCGTTTGATAT+TGG | - | chr8.2:43803718-43803737 | MS.gene25582:CDS | 30.0% | |
TCAGACACATTTGTTTCAAA+GGG | - | chr8.2:43803158-43803177 | MS.gene25582:CDS | 30.0% | |
TTCAGACACATTTGTTTCAA+AGG | - | chr8.2:43803157-43803176 | MS.gene25582:CDS | 30.0% | |
TTTGATATTGGAAGCTTATG+GGG | - | chr8.2:43803730-43803749 | MS.gene25582:CDS | 30.0% | |
! | AATTTTCATTCCAGGCAAAA+GGG | + | chr8.2:43803513-43803532 | None:intergenic | 30.0% |
! | AGGATTTTTCACTACAAAGA+TGG | - | chr8.2:43803196-43803215 | MS.gene25582:CDS | 30.0% |
! | GTTTTTCCAATTTTCATTCC+AGG | + | chr8.2:43803521-43803540 | None:intergenic | 30.0% |
! | TCAACAAGTTGAAGAGTATA+TGG | + | chr8.2:43803590-43803609 | None:intergenic | 30.0% |
AAACGAGAATTGCTATCAGT+TGG | + | chr8.2:43803713-43803732 | None:intergenic | 35.0% | |
AAACTTCGTTAATGCGATCA+TGG | - | chr8.2:43803537-43803556 | MS.gene25582:CDS | 35.0% | |
AACTTCGTTAATGCGATCAT+GGG | - | chr8.2:43803538-43803557 | MS.gene25582:CDS | 35.0% | |
CGTAGGTATAAGGTCTAAAA+AGG | - | chr8.2:43803238-43803257 | MS.gene25582:CDS | 35.0% | |
CGTTTGATATTGGAAGCTTA+TGG | - | chr8.2:43803728-43803747 | MS.gene25582:CDS | 35.0% | |
CTAACCTGTTTGGATTGAAT+TGG | - | chr8.2:43803660-43803679 | MS.gene25582:CDS | 35.0% | |
GCGTATTAATTCCATCTATG+AGG | + | chr8.2:43803355-43803374 | None:intergenic | 35.0% | |
GGGATCTTAAATACCAAAAC+TGG | - | chr8.2:43803750-43803769 | MS.gene25582:CDS | 35.0% | |
TAAATACCAAAACTGGTCAG+AGG | - | chr8.2:43803757-43803776 | MS.gene25582:CDS | 35.0% | |
TTGAATTGGAACGACGATAA+TGG | - | chr8.2:43803674-43803693 | MS.gene25582:CDS | 35.0% | |
! | ACTATTGCTGTTCTGATTTC+CGG | + | chr8.2:43803387-43803406 | None:intergenic | 35.0% |
! | CAATTTTCATTCCAGGCAAA+AGG | + | chr8.2:43803514-43803533 | None:intergenic | 35.0% |
! | CTTTTGCCTGGAATGAAAAT+TGG | - | chr8.2:43803512-43803531 | MS.gene25582:CDS | 35.0% |
!! | ACTCTTCAACTTGTTGATTC+TGG | - | chr8.2:43803593-43803612 | MS.gene25582:CDS | 35.0% |
AAACCATCGAGACATTGACA+AGG | + | chr8.2:43803881-43803900 | None:intergenic | 40.0% | |
ACCTTATACCTACGTAGTAC+AGG | + | chr8.2:43803232-43803251 | None:intergenic | 40.0% | |
AGATGGAATTAATACGCACG+AGG | - | chr8.2:43803358-43803377 | MS.gene25582:CDS | 40.0% | |
CCTTATACCTACGTAGTACA+GGG | + | chr8.2:43803231-43803250 | None:intergenic | 40.0% | |
CGTTCCAATTCAATCCAAAC+AGG | + | chr8.2:43803667-43803686 | None:intergenic | 40.0% | |
GACACATTTGTTTCAAAGGG+TGG | - | chr8.2:43803161-43803180 | MS.gene25582:CDS | 40.0% | |
GCGAATGTTACCATTGTGAA+TGG | + | chr8.2:43803333-43803352 | None:intergenic | 40.0% | |
GTCAGAGGAATCTAAGAGTT+GGG | - | chr8.2:43803772-43803791 | MS.gene25582:CDS | 40.0% | |
TGAATTGTCTGTGACACACT+TGG | + | chr8.2:43803816-43803835 | None:intergenic | 40.0% | |
TGTGTCACAGACAATTCATG+TGG | - | chr8.2:43803818-43803837 | MS.gene25582:CDS | 40.0% | |
TTGATTGACGCTAACCTGTT+TGG | - | chr8.2:43803650-43803669 | MS.gene25582:CDS | 40.0% | |
! | AAGAGCATGCGGATTATAGA+TGG | + | chr8.2:43803852-43803871 | None:intergenic | 40.0% |
! | ACTCTAACCAAGCGATTTTG+TGG | - | chr8.2:43803462-43803481 | MS.gene25582:CDS | 40.0% |
! | TAGATTCCTCTGACCAGTTT+TGG | + | chr8.2:43803766-43803785 | None:intergenic | 40.0% |
!! | AACCATCTGATGCTGATTCT+TGG | - | chr8.2:43803903-43803922 | MS.gene25582:CDS | 40.0% |
!! | ACCATCTGATGCTGATTCTT+GGG | - | chr8.2:43803904-43803923 | MS.gene25582:CDS | 40.0% |
AACGCTGAGGAGGTAACAAA+TGG | + | chr8.2:43803305-43803324 | None:intergenic | 45.0% | |
AACTCAACCCTGTACTACGT+AGG | - | chr8.2:43803221-43803240 | MS.gene25582:CDS | 45.0% | |
AACTCTGCCACAAAATCGCT+TGG | + | chr8.2:43803472-43803491 | None:intergenic | 45.0% | |
AAGGGTGGAAACTACGAACT+AGG | - | chr8.2:43803176-43803195 | MS.gene25582:CDS | 45.0% | |
ACGCTGAGGAGGTAACAAAT+GGG | + | chr8.2:43803304-43803323 | None:intergenic | 45.0% | |
AGAGGAATCTAAGAGTTGGG+CGG | - | chr8.2:43803775-43803794 | MS.gene25582:CDS | 45.0% | |
AGAGTATATGGTCCCTCAGT+AGG | + | chr8.2:43803578-43803597 | None:intergenic | 45.0% | |
AGGTAACAAATGGGTACACG+AGG | + | chr8.2:43803295-43803314 | None:intergenic | 45.0% | |
AGTGAAGATGACCCTACTGA+GGG | - | chr8.2:43803563-43803582 | MS.gene25582:CDS | 45.0% | |
ATTAATACGCACGAGGTGAC+CGG | - | chr8.2:43803365-43803384 | MS.gene25582:CDS | 45.0% | |
CCCTGTACTACGTAGGTATA+AGG | - | chr8.2:43803228-43803247 | MS.gene25582:CDS | 45.0% | |
GAGTATATGGTCCCTCAGTA+GGG | + | chr8.2:43803577-43803596 | None:intergenic | 45.0% | |
GCGTTGCTAACCATTCACAA+TGG | - | chr8.2:43803320-43803339 | MS.gene25582:CDS | 45.0% | |
GGTAACATTCGCCTCATAGA+TGG | - | chr8.2:43803341-43803360 | MS.gene25582:CDS | 45.0% | |
GGTCAGAGGAATCTAAGAGT+TGG | - | chr8.2:43803771-43803790 | MS.gene25582:CDS | 45.0% | |
TGGTATCTACGCAACTCTCT+TGG | - | chr8.2:43803409-43803428 | MS.gene25582:CDS | 45.0% | |
! | AGTTGTTGTTCACCAGTACC+AGG | + | chr8.2:43803445-43803464 | None:intergenic | 45.0% |
!! | CATCTGATGCTGATTCTTGG+GGG | - | chr8.2:43803906-43803925 | MS.gene25582:CDS | 45.0% |
!! | CCATCTGATGCTGATTCTTG+GGG | - | chr8.2:43803905-43803924 | MS.gene25582:CDS | 45.0% |
AATGGTTAGCAACGCTGAGG+AGG | + | chr8.2:43803315-43803334 | None:intergenic | 50.0% | |
CCCCAAGAATCAGCATCAGA+TGG | + | chr8.2:43803908-43803927 | None:intergenic | 50.0% | |
GAGTGAAGATGACCCTACTG+AGG | - | chr8.2:43803562-43803581 | MS.gene25582:CDS | 50.0% | |
GTGAATGGTTAGCAACGCTG+AGG | + | chr8.2:43803318-43803337 | None:intergenic | 50.0% | |
TACGCAACTCTCTTGGACAC+AGG | - | chr8.2:43803416-43803435 | MS.gene25582:CDS | 50.0% | |
TCTCTTGGACACAGGAAACC+TGG | - | chr8.2:43803424-43803443 | MS.gene25582:CDS | 50.0% | |
! | CAAGGCTCAACAAGAGCATG+CGG | + | chr8.2:43803863-43803882 | None:intergenic | 50.0% |
! | GAGCCTTGTCAATGTCTCGA+TGG | - | chr8.2:43803875-43803894 | MS.gene25582:CDS | 50.0% |
ACAGGTCAGCTGGATGTGTC+AGG | - | chr8.2:43803936-43803955 | MS.gene25582:CDS | 55.0% | |
CAGGTCAGCTGGATGTGTCA+GGG | - | chr8.2:43803937-43803956 | MS.gene25582:CDS | 55.0% | |
GGACACAGGAAACCTGGTAC+TGG | - | chr8.2:43803430-43803449 | MS.gene25582:CDS | 55.0% | |
!! | ATGCTGATTCTTGGGGGCAG+GGG | - | chr8.2:43803912-43803931 | MS.gene25582:CDS | 55.0% |
!! | CAGGCAAAAGGGTGTCTGAG+GGG | + | chr8.2:43803502-43803521 | None:intergenic | 55.0% |
!! | CCAGGCAAAAGGGTGTCTGA+GGG | + | chr8.2:43803503-43803522 | None:intergenic | 55.0% |
!! | GATGCTGATTCTTGGGGGCA+GGG | - | chr8.2:43803911-43803930 | MS.gene25582:CDS | 55.0% |
!! | TCCAGGCAAAAGGGTGTCTG+AGG | + | chr8.2:43803504-43803523 | None:intergenic | 55.0% |
!! | TGATGCTGATTCTTGGGGGC+AGG | - | chr8.2:43803910-43803929 | MS.gene25582:CDS | 55.0% |
! | CCCTCAGACACCCTTTTGCC+TGG | - | chr8.2:43803500-43803519 | MS.gene25582:CDS | 60.0% |
!! | TGCTGATTCTTGGGGGCAGG+GGG | - | chr8.2:43803913-43803932 | MS.gene25582:CDS | 60.0% |
ATTCTTGGGGGCAGGGGGAC+AGG | - | chr8.2:43803918-43803937 | MS.gene25582:CDS | 65.0% | |
GGGCAGGGGGACAGGTCAGC+TGG | - | chr8.2:43803926-43803945 | MS.gene25582:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.2 | gene | 43803137 | 43803976 | 43803137 | ID=MS.gene25582 |
chr8.2 | mRNA | 43803137 | 43803976 | 43803137 | ID=MS.gene25582.t1;Parent=MS.gene25582 |
chr8.2 | exon | 43803137 | 43803976 | 43803137 | ID=MS.gene25582.t1.exon1;Parent=MS.gene25582.t1 |
chr8.2 | CDS | 43803137 | 43803976 | 43803137 | ID=cds.MS.gene25582.t1;Parent=MS.gene25582.t1 |
Gene Sequence |
Protein sequence |