Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26726.t1 | XP_003609929.1 | 96.7 | 1046 | 35 | 0 | 1 | 1046 | 3 | 1048 | 0.00E+00 | 2031.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26726.t1 | Q9SMZ4 | 69.2 | 1054 | 313 | 6 | 3 | 1046 | 13 | 1064 | 0.0e+00 | 1466.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26726.t1 | G7JS28 | 96.7 | 1046 | 35 | 0 | 1 | 1046 | 3 | 1048 | 0.0e+00 | 2031.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050800 | MS.gene26726 | 0.822155 | 2.76E-53 | -1.69E-46 |
| MS.gene052922 | MS.gene26726 | 0.857266 | 1.83E-62 | -1.69E-46 |
| MS.gene053175 | MS.gene26726 | 0.809143 | 2.19E-50 | -1.69E-46 |
| MS.gene05726 | MS.gene26726 | 0.800081 | 1.70E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26726.t1 | MTR_4g124470 | 96.654 | 1046 | 35 | 0 | 1 | 1046 | 3 | 1048 | 0.0 | 2104 |
| MS.gene26726.t1 | MTR_4g124470 | 95.916 | 1053 | 36 | 1 | 1 | 1046 | 3 | 1055 | 0.0 | 2097 |
| MS.gene26726.t1 | MTR_4g124470 | 96.480 | 966 | 34 | 0 | 81 | 1046 | 10 | 975 | 0.0 | 1942 |
| MS.gene26726.t1 | MTR_4g124470 | 96.473 | 964 | 34 | 0 | 83 | 1046 | 1 | 964 | 0.0 | 1937 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26726.t1 | AT4G33150 | 69.289 | 1055 | 312 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1521 |
| MS.gene26726.t1 | AT4G33150 | 69.289 | 1055 | 312 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1521 |
| MS.gene26726.t1 | AT4G33150 | 69.289 | 1055 | 312 | 6 | 2 | 1046 | 12 | 1064 | 0.0 | 1521 |
| MS.gene26726.t1 | AT4G33150 | 64.938 | 482 | 164 | 2 | 568 | 1046 | 3 | 482 | 0.0 | 658 |
Find 228 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACCGCAACTCTTTAATTTA+TGG | 0.062968 | 8.2:+8845755 | MS.gene26726:CDS |
| CAAACTTGCCTGCTCATTTA+AGG | 0.104303 | 8.2:+8842108 | MS.gene26726:CDS |
| AATAGATGTTGATATCATTT+TGG | 0.140848 | 8.2:+8843500 | MS.gene26726:CDS |
| TATCAGAATCTGTGAATAAA+TGG | 0.154234 | 8.2:+8838478 | MS.gene26726:CDS |
| AGAAGGTTGAACAATAATTT+TGG | 0.164479 | 8.2:-8838565 | None:intergenic |
| GACTAGGCTTCGCAATATTT+TGG | 0.165045 | 8.2:+8842035 | MS.gene26726:intron |
| GTCCCAATTTGTCACAAATT+TGG | 0.171779 | 8.2:+8842067 | MS.gene26726:CDS |
| CTTTCTGTGCCTTGTGAGTA+TGG | 0.204473 | 8.2:-8838985 | None:intergenic |
| GAATTGATTGTTGGAGAAAA+TGG | 0.208921 | 8.2:+8839161 | MS.gene26726:CDS |
| TTAATTTATGGAGATTTATA+TGG | 0.210990 | 8.2:+8845767 | MS.gene26726:CDS |
| AAACACTTTCATGGGATCTT+TGG | 0.220013 | 8.2:-8840292 | None:intergenic |
| AAGCCAAATTTGTGACAAAT+TGG | 0.238819 | 8.2:-8842070 | None:intergenic |
| TGTAGTTCACTTAGTTTAGA+TGG | 0.273032 | 8.2:-8840001 | None:intergenic |
| GGGAAAAGATTACTTGCATT+TGG | 0.294277 | 8.2:+8839182 | MS.gene26726:CDS |
| GCACCATACACATCCGTTAT+TGG | 0.296485 | 8.2:+8840491 | MS.gene26726:CDS |
| AATGGATTGTTGGCATCTTC+AGG | 0.309153 | 8.2:-8845005 | None:intergenic |
| CAATTGATTCACCCTTCTTC+AGG | 0.309166 | 8.2:+8840855 | MS.gene26726:CDS |
| CTTAGTTAATTGCATGTATT+GGG | 0.310022 | 8.2:+8840700 | MS.gene26726:intron |
| TAGATGGATCCACAAAAGTA+TGG | 0.312041 | 8.2:-8839985 | None:intergenic |
| CTGCAGCTTCAATAATATCT+AGG | 0.319514 | 8.2:-8842566 | None:intergenic |
| AACACTTTCATGGGATCTTT+GGG | 0.324739 | 8.2:-8840291 | None:intergenic |
| AGATCATGGCGACACTTTCT+AGG | 0.327865 | 8.2:+8846031 | MS.gene26726:CDS |
| AGAGCTACTTTGCTTGAATT+CGG | 0.328075 | 8.2:+8846811 | MS.gene26726:CDS |
| AAGAAGGCATAAGCTCTATT+TGG | 0.328153 | 8.2:-8838959 | None:intergenic |
| CACTTTGTCAAACACTTTCA+TGG | 0.328950 | 8.2:-8840301 | None:intergenic |
| TACCTGAATTTATATGCTAA+TGG | 0.330123 | 8.2:-8845023 | None:intergenic |
| AGCTGAATTCCAGTTACATT+TGG | 0.335411 | 8.2:-8843668 | None:intergenic |
| GAAAGAAAACATGCCTTTGC+TGG | 0.339421 | 8.2:+8839003 | MS.gene26726:CDS |
| GTCTTTACTGGCTCGGGAAA+TGG | 0.347110 | 8.2:+8839528 | MS.gene26726:CDS |
| TCCTTTCTTGTAGTTTGCTC+TGG | 0.349399 | 8.2:+8839935 | MS.gene26726:intron |
| AGTAAGAGGAAGAAGATGTT+TGG | 0.351467 | 8.2:+8838435 | None:intergenic |
| GATGCTGGTATAACAATTCT+TGG | 0.355805 | 8.2:+8844426 | MS.gene26726:CDS |
| ATACCTGCTCTGCATCCTTC+AGG | 0.358896 | 8.2:-8843533 | None:intergenic |
| GAGCTACTTTGCTTGAATTC+GGG | 0.360095 | 8.2:+8846812 | MS.gene26726:CDS |
| ATTCAAGATTTGATGAGAAA+TGG | 0.360260 | 8.2:+8840758 | MS.gene26726:CDS |
| TATGGAGATTTATATGGAAT+AGG | 0.360466 | 8.2:+8845773 | MS.gene26726:CDS |
| GGCGAAACTTTACATATTGA+TGG | 0.362283 | 8.2:+8845388 | MS.gene26726:CDS |
| TGCAGATGATAAGGCTGTTC+TGG | 0.367690 | 8.2:+8843218 | MS.gene26726:CDS |
| TATGATTATGAATTGATTGT+TGG | 0.372175 | 8.2:+8839152 | MS.gene26726:CDS |
| AAAATTGGAGTGTAATGTTC+AGG | 0.372458 | 8.2:-8840455 | None:intergenic |
| TCTTAGTTAATTGCATGTAT+TGG | 0.375626 | 8.2:+8840699 | MS.gene26726:intron |
| TCTCCTATCAATGCTCCATC+TGG | 0.384278 | 8.2:-8846156 | None:intergenic |
| GGTATTCTATCTCCACTTCA+TGG | 0.384578 | 8.2:-8846762 | None:intergenic |
| CTGGATATTATACAAGCTTA+TGG | 0.384591 | 8.2:+8847645 | MS.gene26726:CDS |
| TCACCCTGTGGTCTCATCCT+TGG | 0.386368 | 8.2:+8838651 | MS.gene26726:CDS |
| GAAGGCATTCCAAATGTAAC+TGG | 0.386769 | 8.2:+8843659 | MS.gene26726:CDS |
| TCCAGCTGCTGTGGGAGCTC+TGG | 0.387534 | 8.2:+8846885 | MS.gene26726:CDS |
| GCGTGGTATATAATCATATA+AGG | 0.391117 | 8.2:-8842165 | None:intergenic |
| TCTCTCCTCCATGCGGAAAC+AGG | 0.392544 | 8.2:-8846397 | None:intergenic |
| TCCTTCCTTGGCTGCTGCTA+AGG | 0.392618 | 8.2:+8839434 | MS.gene26726:CDS |
| ATCCATTAGCATATAAATTC+AGG | 0.392846 | 8.2:+8845021 | MS.gene26726:CDS |
| TACTAGGTCATACCTATTCC+TGG | 0.394462 | 8.2:-8844465 | None:intergenic |
| GCAGATATAACTTGTGATAT+AGG | 0.397513 | 8.2:+8840800 | MS.gene26726:CDS |
| AGTTTCGCCGTGATATTTGT+AGG | 0.400233 | 8.2:-8845374 | None:intergenic |
| GCTCAAATGCTATCATCATT+TGG | 0.400718 | 8.2:+8843429 | MS.gene26726:CDS |
| TAAATTAAAGAGTTGCGGTT+TGG | 0.402978 | 8.2:-8845752 | None:intergenic |
| TGATGAATTCTCTTAGTAGA+AGG | 0.407101 | 8.2:-8838582 | None:intergenic |
| GATCCAGATGGAGCATTGAT+AGG | 0.408026 | 8.2:+8846153 | MS.gene26726:CDS |
| TGTAGTTTGCTCTGGTGCTC+AGG | 0.408673 | 8.2:+8839943 | MS.gene26726:intron |
| TTTATATGCTAATGGATTGT+TGG | 0.411001 | 8.2:-8845015 | None:intergenic |
| GTAAGAGGAAGAAGATGTTT+GGG | 0.411776 | 8.2:+8838436 | None:intergenic |
| TCACCTGGAGTGTATACTTC+AGG | 0.415501 | 8.2:-8847047 | None:intergenic |
| GCAACTCAGGGATTGCCATT+GGG | 0.415806 | 8.2:+8839486 | MS.gene26726:CDS |
| AATTGATTGTTGGAGAAAAT+GGG | 0.428975 | 8.2:+8839162 | MS.gene26726:CDS |
| CCGTGATATTTGTAGGTGGC+AGG | 0.430034 | 8.2:-8845367 | None:intergenic |
| ATGATTCAGCTAAAAGACTA+AGG | 0.430434 | 8.2:+8845693 | MS.gene26726:CDS |
| ACCAGAGCTCCCACAGCAGC+TGG | 0.430788 | 8.2:-8846886 | None:intergenic |
| GAATTCGGGAAAACTATTGA+TGG | 0.431573 | 8.2:+8846826 | MS.gene26726:CDS |
| ACCTCCTTTGCAAATTCTGT+TGG | 0.433432 | 8.2:-8841935 | None:intergenic |
| TATAATCATATAAGGAGGTT+AGG | 0.433937 | 8.2:-8842157 | None:intergenic |
| ATTGCATGTATTGGGAGAAA+AGG | 0.438391 | 8.2:+8840708 | MS.gene26726:CDS |
| CATGTCCATGCTAGATGATA+AGG | 0.441776 | 8.2:+8844398 | MS.gene26726:CDS |
| GTAACAGGGTATTTAAGTCT+TGG | 0.442453 | 8.2:+8839369 | MS.gene26726:intron |
| AGATCAGTGCAGATTGTTGA+AGG | 0.443060 | 8.2:+8843641 | MS.gene26726:intron |
| TTCAGACAAGAGGTGTCTTA+AGG | 0.444078 | 8.2:+8847015 | MS.gene26726:CDS |
| AAACATGCCTTTGCTGGATA+AGG | 0.445017 | 8.2:+8839009 | MS.gene26726:CDS |
| ATTGATTTCTTGCGTGGATT+GGG | 0.450552 | 8.2:+8839230 | MS.gene26726:CDS |
| TGATCAATTTCTGATAAATG+AGG | 0.450882 | 8.2:+8842542 | MS.gene26726:CDS |
| CGTGGAACCCTCCGTTATGA+AGG | 0.452301 | 8.2:+8845818 | MS.gene26726:CDS |
| ATGTTTGGGAACGGTGTTGT+TGG | 0.453688 | 8.2:+8838450 | MS.gene26726:CDS |
| GGTGAGATGGGCTTGGACCC+AGG | 0.453772 | 8.2:+8844447 | MS.gene26726:CDS |
| TGTTAGATATGATGCAATAA+CGG | 0.453846 | 8.2:+8841853 | MS.gene26726:intron |
| ATGGGCTTGGACCCAGGAAT+AGG | 0.458978 | 8.2:+8844453 | MS.gene26726:CDS |
| ATCAGAATCTGTGAATAAAT+GGG | 0.459403 | 8.2:+8838479 | MS.gene26726:CDS |
| GATAGGAGAGGAGGATATAT+CGG | 0.461696 | 8.2:+8846170 | MS.gene26726:CDS |
| AGGAGAGCTTGCATAGTCAA+TGG | 0.463364 | 8.2:+8842128 | MS.gene26726:CDS |
| CCAATGGTATAAAACATTGT+TGG | 0.463677 | 8.2:+8843458 | MS.gene26726:CDS |
| ACAGGTTGGTGCAGATGATA+AGG | 0.465036 | 8.2:+8843209 | MS.gene26726:intron |
| AGCCAAATTTGTGACAAATT+GGG | 0.465211 | 8.2:-8842069 | None:intergenic |
| ATGGCGACACTTTCTAGGAT+TGG | 0.465848 | 8.2:+8846036 | MS.gene26726:CDS |
| ATCATACATGTATCCTTCCT+TGG | 0.466001 | 8.2:+8839422 | MS.gene26726:CDS |
| AGATTACTTCATCATGGAAC+TGG | 0.467747 | 8.2:+8838537 | MS.gene26726:CDS |
| GATTGATTTCTTGCGTGGAT+TGG | 0.470829 | 8.2:+8839229 | MS.gene26726:CDS |
| AATTCTTGGTGAGATGGGCT+TGG | 0.470872 | 8.2:+8844440 | MS.gene26726:CDS |
| CAGCTGGAATACCAACAGTA+AGG | 0.471355 | 8.2:-8846870 | None:intergenic |
| TGCAACTCAGGGATTGCCAT+TGG | 0.471975 | 8.2:+8839485 | MS.gene26726:CDS |
| AAAGCAAAAGCAGGAAAGTC+AGG | 0.472612 | 8.2:-8845719 | None:intergenic |
| AAAGCACTTTGGCATGAAGC+AGG | 0.472763 | 8.2:-8846366 | None:intergenic |
| TCACAACACAACCATAAACT+TGG | 0.477682 | 8.2:-8840248 | None:intergenic |
| CAACTCAGGGATTGCCATTG+GGG | 0.478672 | 8.2:+8839487 | MS.gene26726:CDS |
| CTCTCCTCATTCTTTAGAGT+CGG | 0.479336 | 8.2:-8846081 | None:intergenic |
| CTCCATAAATTAAAGAGTTG+CGG | 0.481371 | 8.2:-8845757 | None:intergenic |
| GAAGCATCAACTGTCTTTCG+TGG | 0.483593 | 8.2:+8845800 | MS.gene26726:CDS |
| AGTAAAATTTCACTTACGCT+TGG | 0.484189 | 8.2:+8843312 | MS.gene26726:CDS |
| ATAACAATTCTTGGTGAGAT+GGG | 0.485910 | 8.2:+8844435 | MS.gene26726:CDS |
| TATAACAATTCTTGGTGAGA+TGG | 0.488831 | 8.2:+8844434 | MS.gene26726:CDS |
| CATTCCCCTCCATGTCTTCG+TGG | 0.489845 | 8.2:-8841883 | None:intergenic |
| TGCAGCCTTAGCAGCAGCCA+AGG | 0.493775 | 8.2:-8839439 | None:intergenic |
| ACTTTGTCAAACACTTTCAT+GGG | 0.496078 | 8.2:-8840300 | None:intergenic |
| CCGATATCACCTACCAATAA+CGG | 0.497549 | 8.2:-8840504 | None:intergenic |
| ATCCTACTCCAACACAGAAA+AGG | 0.497780 | 8.2:+8846422 | MS.gene26726:CDS |
| TTTCTGTGCCTTGTGAGTAT+GGG | 0.498508 | 8.2:-8838984 | None:intergenic |
| TGTTGGTATTCCAGCTGCTG+TGG | 0.499554 | 8.2:+8846876 | MS.gene26726:CDS |
| CTTGGTAAAGTTCATGAAAA+CGG | 0.501285 | 8.2:+8843330 | MS.gene26726:CDS |
| ACTAAGTGAACTACATAAGA+TGG | 0.503097 | 8.2:+8840009 | MS.gene26726:CDS |
| TGGTGAAGAAATTGCAACTC+AGG | 0.505018 | 8.2:+8839473 | MS.gene26726:CDS |
| TGTTTGGGAACGGTGTTGTT+GGG | 0.505431 | 8.2:+8838451 | MS.gene26726:CDS |
| CAAGCTCTCCTTAAATGAGC+AGG | 0.507376 | 8.2:-8842116 | None:intergenic |
| CCTGTAGGTGCCATCCGAGC+TGG | 0.508824 | 8.2:+8845337 | MS.gene26726:CDS |
| GTACCTGAAGGATGCAGAGC+AGG | 0.509916 | 8.2:+8843530 | MS.gene26726:CDS |
| CCAGCTCGGATGGCACCTAC+AGG | 0.510844 | 8.2:-8845337 | None:intergenic |
| CCACTTGGTTAACTGTCATG+TGG | 0.512401 | 8.2:+8842599 | MS.gene26726:CDS |
| TTTGGGATCTTTGTACCTGA+AGG | 0.513179 | 8.2:+8843518 | MS.gene26726:CDS |
| TATAGGGTTTAGTGAGATCA+TGG | 0.516919 | 8.2:+8846017 | MS.gene26726:intron |
| TCCAACAGAATTTGCAAAGG+AGG | 0.517776 | 8.2:+8841934 | MS.gene26726:CDS |
| CTAGATATTATTGAAGCTGC+AGG | 0.517883 | 8.2:+8842567 | MS.gene26726:CDS |
| CGTAGCAAATGCTTGCATTG+AGG | 0.522620 | 8.2:+8843988 | MS.gene26726:CDS |
| AGGATTGCGTCCAGCTCGGA+TGG | 0.524365 | 8.2:-8845347 | None:intergenic |
| CTACCAATAACGGATGTGTA+TGG | 0.525262 | 8.2:-8840494 | None:intergenic |
| GCCTTAGCAGCAGCCAAGGA+AGG | 0.525409 | 8.2:-8839435 | None:intergenic |
| TGCAGGAGGCTCCTTCCACT+TGG | 0.526358 | 8.2:+8842584 | MS.gene26726:CDS |
| CCGCTGGTTGTTTGATGCCA+AGG | 0.527121 | 8.2:-8838668 | None:intergenic |
| AGATGGATCCACAAAAGTAT+GGG | 0.528191 | 8.2:-8839984 | None:intergenic |
| CACGAAGACATGGAGGGGAA+TGG | 0.528495 | 8.2:+8841884 | MS.gene26726:CDS |
| TCATGAAAACGGCATGGAGA+AGG | 0.528840 | 8.2:+8843341 | MS.gene26726:CDS |
| AGAAATGGATGTCCACTTGT+TGG | 0.530432 | 8.2:+8840773 | MS.gene26726:CDS |
| TTGTTGGCATCTTCAGGAGA+TGG | 0.531880 | 8.2:-8844999 | None:intergenic |
| GCTACGATAATGTGACAACT+AGG | 0.532719 | 8.2:-8843971 | None:intergenic |
| TTTAGCCTTATCATCTAGCA+TGG | 0.533798 | 8.2:-8844403 | None:intergenic |
| GATGATAAGGCTAAAGATGC+TGG | 0.536549 | 8.2:+8844411 | MS.gene26726:CDS |
| GTGTATACTTCAGGTTGGAT+AGG | 0.540931 | 8.2:-8847038 | None:intergenic |
| CTTGTGAGTATGGGAAAAGA+AGG | 0.542708 | 8.2:-8838975 | None:intergenic |
| TGCAGCTTCAATAATATCTA+GGG | 0.544465 | 8.2:-8842565 | None:intergenic |
| TGGAGCATTGATAGGAGAGG+AGG | 0.547265 | 8.2:+8846161 | MS.gene26726:CDS |
| TGTGCTAGATTACTTCATCA+TGG | 0.548301 | 8.2:+8838531 | MS.gene26726:CDS |
| AAGGCTGCAGTCATTTCTGT+TGG | 0.549082 | 8.2:+8839453 | MS.gene26726:CDS |
| CTACGATAATGTGACAACTA+GGG | 0.550212 | 8.2:-8843970 | None:intergenic |
| ATATGGTGTATACCTGAAGA+AGG | 0.551418 | 8.2:-8840867 | None:intergenic |
| GTTGGTATTCCAGCTGCTGT+GGG | 0.551669 | 8.2:+8846877 | MS.gene26726:CDS |
| GATGATAGCATTTGAGCAGC+TGG | 0.553928 | 8.2:-8843423 | None:intergenic |
| GATGATCCAAGTGACAGAAA+AGG | 0.555873 | 8.2:-8839402 | None:intergenic |
| CACTTGGTTAACTGTCATGT+GGG | 0.556353 | 8.2:+8842600 | MS.gene26726:CDS |
| GATGCCAAGGATGAGACCAC+AGG | 0.558412 | 8.2:-8838655 | None:intergenic |
| ACTGCCATGGCCCTTACTGT+TGG | 0.561603 | 8.2:+8846859 | MS.gene26726:CDS |
| TGGAATTCAGCTTGATGTGA+TGG | 0.562069 | 8.2:+8843679 | MS.gene26726:CDS |
| AGATGGAAGTCCACCACAGT+AGG | 0.563553 | 8.2:-8844982 | None:intergenic |
| CCCCTCCATGTCTTCGTGGT+AGG | 0.565406 | 8.2:-8841879 | None:intergenic |
| TTCAGTTGGATTAGCAAGAG+AGG | 0.565861 | 8.2:-8843262 | None:intergenic |
| ACAAACAAAATTCAGACAAG+AGG | 0.572985 | 8.2:+8847005 | MS.gene26726:CDS |
| TATAAATCATGCCTTCATAA+CGG | 0.573146 | 8.2:-8845829 | None:intergenic |
| AGACATTCCAAAGCAAAAGC+AGG | 0.573853 | 8.2:-8845728 | None:intergenic |
| CGACGAGGCACATATGCAGA+AGG | 0.575121 | 8.2:+8844938 | MS.gene26726:CDS |
| AGGCAACATCAAAAGCACTT+TGG | 0.579109 | 8.2:-8846377 | None:intergenic |
| GATGCTCTCTATGAAGAAGT+TGG | 0.580939 | 8.2:+8838606 | MS.gene26726:CDS |
| ATATCTGCTATTCCAACAAG+TGG | 0.581840 | 8.2:-8840785 | None:intergenic |
| AAGCACTTTGGCATGAAGCA+GGG | 0.582412 | 8.2:-8846365 | None:intergenic |
| ACTAGGTCATACCTATTCCT+GGG | 0.582968 | 8.2:-8844464 | None:intergenic |
| CATCATTTGGATCCAGCCAA+TGG | 0.586441 | 8.2:+8843442 | MS.gene26726:CDS |
| TGGCAGGATTGCGTCCAGCT+CGG | 0.586821 | 8.2:-8845351 | None:intergenic |
| TCTTTCACTTCCTACTGTGG+TGG | 0.587351 | 8.2:+8844972 | MS.gene26726:CDS |
| GGTGAAGAAATTGCAACTCA+GGG | 0.588076 | 8.2:+8839474 | MS.gene26726:CDS |
| GCACAGTGTGATGGAGTCAA+AGG | 0.595862 | 8.2:-8838513 | None:intergenic |
| CTTATCATCTAGCATGGACA+TGG | 0.596716 | 8.2:-8844397 | None:intergenic |
| TATTTCAGCTGGAATCCTGT+AGG | 0.596927 | 8.2:+8845322 | MS.gene26726:intron |
| CAACCTGAAGTATACACTCC+AGG | 0.596974 | 8.2:+8847044 | MS.gene26726:CDS |
| AGCTGGAATACCAACAGTAA+GGG | 0.599510 | 8.2:-8846869 | None:intergenic |
| TCTTCCAACAGAATTTGCAA+AGG | 0.600391 | 8.2:+8841931 | MS.gene26726:CDS |
| GAAACTAATCAAGCAAGGCA+TGG | 0.601563 | 8.2:+8840210 | MS.gene26726:CDS |
| CTGGAGTGTATACTTCAGGT+TGG | 0.602410 | 8.2:-8847043 | None:intergenic |
| GAGTCAGATTTGCGCATGCG+TGG | 0.604903 | 8.2:-8842182 | None:intergenic |
| AACAGGAAACTAATCAAGCA+AGG | 0.605183 | 8.2:+8840205 | MS.gene26726:intron |
| GGAATGATTGATTTCTTGCG+TGG | 0.606806 | 8.2:+8839224 | MS.gene26726:CDS |
| TGATGTTGCCTGTTTCCGCA+TGG | 0.607057 | 8.2:+8846389 | MS.gene26726:CDS |
| GGATTCCTACCACGAAGACA+TGG | 0.609570 | 8.2:+8841874 | MS.gene26726:CDS |
| TCATCCGACTCTAAAGAATG+AGG | 0.610462 | 8.2:+8846077 | MS.gene26726:CDS |
| AGTAATCTAGCACAGTGTGA+TGG | 0.610805 | 8.2:-8838522 | None:intergenic |
| AAATTGGAGTGTAATGTTCA+GGG | 0.611393 | 8.2:-8840454 | None:intergenic |
| AGGAAGAAGATGTTTGGGAA+CGG | 0.612656 | 8.2:+8838441 | None:intergenic |
| AAGTCTTTCACTTCCTACTG+TGG | 0.613298 | 8.2:+8844969 | MS.gene26726:CDS |
| TACGATAATGTGACAACTAG+GGG | 0.615232 | 8.2:-8843969 | None:intergenic |
| GAGAGGAGGATATATCGGAA+AGG | 0.615819 | 8.2:+8846175 | MS.gene26726:CDS |
| GTCTGACAGGTTTCTCTGAG+CGG | 0.621105 | 8.2:+8842510 | MS.gene26726:intron |
| AGATGGAGCATTGATAGGAG+AGG | 0.625287 | 8.2:+8846158 | MS.gene26726:CDS |
| AATCATGCCTTCATAACGGA+GGG | 0.629458 | 8.2:-8845825 | None:intergenic |
| TAAAGTTCATGAAAACGGCA+TGG | 0.629653 | 8.2:+8843335 | MS.gene26726:CDS |
| ATGACAGTTAACCAAGTGGA+AGG | 0.634711 | 8.2:-8842595 | None:intergenic |
| ATTGTTTGCGAAGATCCAGA+TGG | 0.636919 | 8.2:+8846141 | MS.gene26726:CDS |
| TCCTACCACGAAGACATGGA+GGG | 0.638823 | 8.2:+8841878 | MS.gene26726:CDS |
| CCTGCCACCTACAAATATCA+CGG | 0.645275 | 8.2:+8845367 | MS.gene26726:CDS |
| AAATCATGCCTTCATAACGG+AGG | 0.646151 | 8.2:-8845826 | None:intergenic |
| GATATAACTTGTGATATAGG+TGG | 0.647734 | 8.2:+8840803 | MS.gene26726:CDS |
| ACACGCACCTTATCCAGCAA+AGG | 0.648996 | 8.2:-8839016 | None:intergenic |
| GATATTATTGAAGCTGCAGG+AGG | 0.652514 | 8.2:+8842570 | MS.gene26726:CDS |
| AATACCAACAGTAAGGGCCA+TGG | 0.655144 | 8.2:-8846863 | None:intergenic |
| TCACAAGACTTGTCACCCTG+TGG | 0.655585 | 8.2:+8838639 | MS.gene26726:CDS |
| ATGCCAAGGATGAGACCACA+GGG | 0.658340 | 8.2:-8838654 | None:intergenic |
| TGCTTATAGCTCAACAACGG+AGG | 0.660557 | 8.2:-8840734 | None:intergenic |
| CCTACCACGAAGACATGGAG+GGG | 0.662630 | 8.2:+8841879 | MS.gene26726:CDS |
| TTCCTACCACGAAGACATGG+AGG | 0.664890 | 8.2:+8841877 | MS.gene26726:CDS |
| ACGAGAGGACAAATCCCCAA+TGG | 0.665124 | 8.2:-8839501 | None:intergenic |
| CCACATGACAGTTAACCAAG+TGG | 0.665864 | 8.2:-8842599 | None:intergenic |
| GTGAATCAATTGACGTAGTG+CGG | 0.666266 | 8.2:-8840844 | None:intergenic |
| GATGGATCCACAAAAGTATG+GGG | 0.670075 | 8.2:-8839983 | None:intergenic |
| TCGGAAAGGATATTAACACT+AGG | 0.670943 | 8.2:+8846189 | MS.gene26726:CDS |
| TGATGATCCAGATCACATGA+TGG | 0.673821 | 8.2:+8844902 | MS.gene26726:intron |
| TTCGCCGTGATATTTGTAGG+TGG | 0.679497 | 8.2:-8845371 | None:intergenic |
| GACGAGGCACATATGCAGAA+GGG | 0.682146 | 8.2:+8844939 | MS.gene26726:CDS |
| ATCTGCTTATAGCTCAACAA+CGG | 0.686249 | 8.2:-8840737 | None:intergenic |
| TGGTATATAATCATATAAGG+AGG | 0.687295 | 8.2:-8842162 | None:intergenic |
| TATGGTGTATACCTGAAGAA+GGG | 0.691493 | 8.2:-8840866 | None:intergenic |
| AGAGCTTGCATAGTCAATGG+AGG | 0.692452 | 8.2:+8842131 | MS.gene26726:CDS |
| CAAGAGCAAATACAAGACAT+CGG | 0.695369 | 8.2:+8842402 | MS.gene26726:CDS |
| TGTTGCCTGTTTCCGCATGG+AGG | 0.700266 | 8.2:+8846392 | MS.gene26726:CDS |
| TGTTGTGATAGCTCAAGACA+TGG | 0.703959 | 8.2:+8840263 | MS.gene26726:CDS |
| CCTTGGCATCAAACAACCAG+CGG | 0.704811 | 8.2:+8838668 | MS.gene26726:CDS |
| AGGATAGTCTCTCCTCCATG+CGG | 0.707814 | 8.2:-8846404 | None:intergenic |
| GGCAATGAAGATGATCGACG+AGG | 0.724936 | 8.2:+8844923 | MS.gene26726:CDS |
| ACGATAATGTGACAACTAGG+GGG | 0.726794 | 8.2:-8843968 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 8838450 | 8847695 | 8838450 | ID=MS.gene26726 |
| chr8.2 | mRNA | 8838450 | 8847695 | 8838450 | ID=MS.gene26726.t1;Parent=MS.gene26726 |
| chr8.2 | exon | 8838450 | 8838689 | 8838450 | ID=MS.gene26726.t1.exon1;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8838450 | 8838689 | 8838450 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8838944 | 8839030 | 8838944 | ID=MS.gene26726.t1.exon2;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8838944 | 8839030 | 8838944 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8839128 | 8839257 | 8839128 | ID=MS.gene26726.t1.exon3;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8839128 | 8839257 | 8839128 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8839376 | 8839549 | 8839376 | ID=MS.gene26726.t1.exon4;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8839376 | 8839549 | 8839376 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8839948 | 8840030 | 8839948 | ID=MS.gene26726.t1.exon5;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8839948 | 8840030 | 8839948 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8840210 | 8840320 | 8840210 | ID=MS.gene26726.t1.exon6;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8840210 | 8840320 | 8840210 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8840437 | 8840512 | 8840437 | ID=MS.gene26726.t1.exon7;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8840437 | 8840512 | 8840437 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8840705 | 8840876 | 8840705 | ID=MS.gene26726.t1.exon8;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8840705 | 8840876 | 8840705 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8841859 | 8841955 | 8841859 | ID=MS.gene26726.t1.exon9;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8841859 | 8841955 | 8841859 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8842041 | 8842207 | 8842041 | ID=MS.gene26726.t1.exon10;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8842041 | 8842207 | 8842041 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8842366 | 8842423 | 8842366 | ID=MS.gene26726.t1.exon11;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8842366 | 8842423 | 8842366 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8842519 | 8842659 | 8842519 | ID=MS.gene26726.t1.exon12;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8842519 | 8842659 | 8842519 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8843213 | 8843551 | 8843213 | ID=MS.gene26726.t1.exon13;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8843213 | 8843551 | 8843213 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8843653 | 8843733 | 8843653 | ID=MS.gene26726.t1.exon14;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8843653 | 8843733 | 8843653 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8843944 | 8844009 | 8843944 | ID=MS.gene26726.t1.exon15;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8843944 | 8844009 | 8843944 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8844357 | 8844474 | 8844357 | ID=MS.gene26726.t1.exon16;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8844357 | 8844474 | 8844357 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8844913 | 8845042 | 8844913 | ID=MS.gene26726.t1.exon17;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8844913 | 8845042 | 8844913 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8845330 | 8845409 | 8845330 | ID=MS.gene26726.t1.exon18;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8845330 | 8845409 | 8845330 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8845681 | 8845839 | 8845681 | ID=MS.gene26726.t1.exon19;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8845681 | 8845839 | 8845681 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8846022 | 8846259 | 8846022 | ID=MS.gene26726.t1.exon20;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8846022 | 8846259 | 8846022 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8846335 | 8846443 | 8846335 | ID=MS.gene26726.t1.exon21;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8846335 | 8846443 | 8846335 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8846745 | 8846906 | 8846745 | ID=MS.gene26726.t1.exon22;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8846745 | 8846906 | 8846745 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8846996 | 8847065 | 8846996 | ID=MS.gene26726.t1.exon23;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8846996 | 8847065 | 8846996 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| chr8.2 | exon | 8847643 | 8847695 | 8847643 | ID=MS.gene26726.t1.exon24;Parent=MS.gene26726.t1 |
| chr8.2 | CDS | 8847643 | 8847695 | 8847643 | ID=cds.MS.gene26726.t1;Parent=MS.gene26726.t1 |
| Gene Sequence |
| Protein sequence |
