Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05726.t1 | AAB81011.1 | 99.8 | 561 | 1 | 0 | 6 | 566 | 26 | 586 | 0.00E+00 | 1166.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05726.t1 | P19251 | 94.7 | 561 | 30 | 0 | 6 | 566 | 26 | 586 | 0.0e+00 | 1115.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05726.t1 | O24483 | 99.8 | 561 | 1 | 0 | 6 | 566 | 26 | 586 | 0.0e+00 | 1166.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052823 | MS.gene05726 | -0.803718 | 3.05E-49 | -1.69E-46 |
MS.gene052922 | MS.gene05726 | 0.813481 | 2.50E-51 | -1.69E-46 |
MS.gene053203 | MS.gene05726 | -0.800217 | 1.60E-48 | -1.69E-46 |
MS.gene053826 | MS.gene05726 | 0.811097 | 8.30E-51 | -1.69E-46 |
MS.gene05726 | MS.gene058157 | -0.824963 | 6.07E-54 | -1.69E-46 |
MS.gene05726 | MS.gene06077 | -0.817081 | 3.97E-52 | -1.69E-46 |
MS.gene05726 | MS.gene061798 | 0.838195 | 3.32E-57 | -1.69E-46 |
MS.gene05726 | MS.gene062121 | 0.837849 | 4.08E-57 | -1.69E-46 |
MS.gene05726 | MS.gene063099 | 0.807157 | 5.80E-50 | -1.69E-46 |
MS.gene05726 | MS.gene063146 | 0.824308 | 8.66E-54 | -1.69E-46 |
MS.gene05726 | MS.gene064062 | 0.869914 | 2.17E-66 | -1.69E-46 |
MS.gene05726 | MS.gene064707 | -0.812766 | 3.59E-51 | -1.69E-46 |
MS.gene05726 | MS.gene065465 | 0.835294 | 1.82E-56 | -1.69E-46 |
MS.gene05726 | MS.gene068138 | -0.805747 | 1.15E-49 | -1.69E-46 |
MS.gene05726 | MS.gene069855 | -0.804213 | 2.41E-49 | -1.69E-46 |
MS.gene05726 | MS.gene070142 | 0.835783 | 1.37E-56 | -1.69E-46 |
MS.gene05726 | MS.gene071844 | 0.801729 | 7.85E-49 | -1.69E-46 |
MS.gene05726 | MS.gene071847 | 0.806442 | 8.21E-50 | -1.69E-46 |
MS.gene05726 | MS.gene072602 | 0.803671 | 3.12E-49 | -1.69E-46 |
MS.gene05726 | MS.gene07329 | -0.823562 | 1.30E-53 | -1.69E-46 |
MS.gene05726 | MS.gene07907 | 0.821244 | 4.48E-53 | -1.69E-46 |
MS.gene05726 | MS.gene08254 | -0.801795 | 7.61E-49 | -1.69E-46 |
MS.gene05726 | MS.gene08322 | 0.847971 | 8.25E-60 | -1.69E-46 |
MS.gene05726 | MS.gene08918 | 0.837616 | 4.68E-57 | -1.69E-46 |
MS.gene05726 | MS.gene08919 | 0.827662 | 1.38E-54 | -1.69E-46 |
MS.gene05726 | MS.gene09053 | -0.81987 | 9.26E-53 | -1.69E-46 |
MS.gene05726 | MS.gene20878 | -0.83677 | 7.70E-57 | -1.69E-46 |
MS.gene05726 | MS.gene21349 | 0.84364 | 1.24E-58 | -1.69E-46 |
MS.gene05726 | MS.gene21350 | 0.800655 | 1.30E-48 | -1.69E-46 |
MS.gene05726 | MS.gene24272 | 0.819495 | 1.13E-52 | -1.69E-46 |
MS.gene05726 | MS.gene24491 | 0.815092 | 1.10E-51 | -1.69E-46 |
MS.gene05726 | MS.gene25136 | 0.822152 | 2.76E-53 | -1.69E-46 |
MS.gene05726 | MS.gene26532 | 0.803081 | 4.13E-49 | -1.69E-46 |
MS.gene05726 | MS.gene26726 | 0.800081 | 1.70E-48 | -1.69E-46 |
MS.gene05726 | MS.gene28020 | 0.802851 | 4.61E-49 | -1.69E-46 |
MS.gene05726 | MS.gene28057 | 0.836837 | 7.40E-57 | -1.69E-46 |
MS.gene05726 | MS.gene31061 | 0.803214 | 3.88E-49 | -1.69E-46 |
MS.gene05726 | MS.gene32652 | -0.800518 | 1.39E-48 | -1.69E-46 |
MS.gene05726 | MS.gene32842 | 0.848034 | 7.93E-60 | -1.69E-46 |
MS.gene05726 | MS.gene33043 | -0.803711 | 3.06E-49 | -1.69E-46 |
MS.gene05726 | MS.gene33913 | 0.80964 | 1.71E-50 | -1.69E-46 |
MS.gene05726 | MS.gene33980 | 0.826596 | 2.49E-54 | -1.69E-46 |
MS.gene05726 | MS.gene34092 | -0.814136 | 1.80E-51 | -1.69E-46 |
MS.gene05726 | MS.gene34412 | 0.813094 | 3.05E-51 | -1.69E-46 |
MS.gene05726 | MS.gene34934 | 0.818412 | 1.99E-52 | -1.69E-46 |
MS.gene05726 | MS.gene35712 | -0.814121 | 1.81E-51 | -1.69E-46 |
MS.gene05726 | MS.gene36337 | -0.806368 | 8.51E-50 | -1.69E-46 |
MS.gene05726 | MS.gene37450 | 0.844094 | 9.35E-59 | -1.69E-46 |
MS.gene05726 | MS.gene42301 | -0.815336 | 9.74E-52 | -1.69E-46 |
MS.gene05726 | MS.gene44722 | 0.813553 | 2.41E-51 | -1.69E-46 |
MS.gene05726 | MS.gene45854 | 0.808152 | 3.56E-50 | -1.69E-46 |
MS.gene05726 | MS.gene51429 | 0.801017 | 1.10E-48 | -1.69E-46 |
MS.gene05726 | MS.gene52444 | -0.811951 | 5.41E-51 | -1.69E-46 |
MS.gene05726 | MS.gene54413 | -0.810827 | 9.50E-51 | -1.69E-46 |
MS.gene05726 | MS.gene55013 | 0.840395 | 8.93E-58 | -1.69E-46 |
MS.gene05726 | MS.gene55120 | 0.811751 | 5.99E-51 | -1.69E-46 |
MS.gene05726 | MS.gene60649 | 0.800017 | 1.76E-48 | -1.69E-46 |
MS.gene05726 | MS.gene61574 | 0.839078 | 1.97E-57 | -1.69E-46 |
MS.gene05726 | MS.gene62835 | 0.830658 | 2.59E-55 | -1.69E-46 |
MS.gene05726 | MS.gene62982 | -0.821272 | 4.41E-53 | -1.69E-46 |
MS.gene05726 | MS.gene63052 | 0.816888 | 4.38E-52 | -1.69E-46 |
MS.gene05726 | MS.gene64615 | 0.819653 | 1.04E-52 | -1.69E-46 |
MS.gene05726 | MS.gene65609 | 0.820692 | 6.00E-53 | -1.69E-46 |
MS.gene05726 | MS.gene66304 | 0.860809 | 1.59E-63 | -1.69E-46 |
MS.gene05726 | MS.gene68147 | 0.808822 | 2.56E-50 | -1.69E-46 |
MS.gene05726 | MS.gene68201 | 0.814119 | 1.81E-51 | -1.69E-46 |
MS.gene05726 | MS.gene68722 | 0.802343 | 5.87E-49 | -1.69E-46 |
MS.gene05726 | MS.gene69450 | -0.811202 | 7.88E-51 | -1.69E-46 |
MS.gene05726 | MS.gene72286 | 0.830747 | 2.47E-55 | -1.69E-46 |
MS.gene05726 | MS.gene73545 | -0.809528 | 1.81E-50 | -1.69E-46 |
MS.gene05726 | MS.gene76521 | -0.800899 | 1.16E-48 | -1.69E-46 |
MS.gene05726 | MS.gene78281 | -0.827137 | 1.85E-54 | -1.69E-46 |
MS.gene05726 | MS.gene78356 | 0.804007 | 2.66E-49 | -1.69E-46 |
MS.gene05726 | MS.gene85136 | -0.80847 | 3.05E-50 | -1.69E-46 |
MS.gene05726 | MS.gene85346 | 0.825729 | 4.00E-54 | -1.69E-46 |
MS.gene05726 | MS.gene87473 | -0.819848 | 9.36E-53 | -1.69E-46 |
MS.gene05726 | MS.gene90192 | 0.80811 | 3.64E-50 | -1.69E-46 |
MS.gene05726 | MS.gene97437 | 0.843374 | 1.46E-58 | -1.69E-46 |
MS.gene05726 | MS.gene97862 | -0.807332 | 5.32E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene05726 | MS.gene052122 | PPI |
MS.gene30955 | MS.gene05726 | PPI |
MS.gene05726 | MS.gene41176 | PPI |
MS.gene05726 | MS.gene004045 | PPI |
MS.gene021114 | MS.gene05726 | PPI |
MS.gene79217 | MS.gene05726 | PPI |
MS.gene05726 | MS.gene45489 | PPI |
MS.gene05726 | MS.gene071169 | PPI |
MS.gene05726 | MS.gene75475 | PPI |
MS.gene052207 | MS.gene05726 | PPI |
MS.gene05726 | MS.gene045117 | PPI |
MS.gene05726 | MS.gene31156 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05726.t1 | MTR_3g464580 | 99.643 | 561 | 2 | 0 | 6 | 566 | 26 | 586 | 0.0 | 1170 |
MS.gene05726.t1 | MTR_3g464580 | 99.587 | 484 | 2 | 0 | 6 | 489 | 26 | 509 | 0.0 | 1013 |
MS.gene05726.t1 | MTR_5g071360 | 86.096 | 561 | 76 | 2 | 6 | 566 | 26 | 584 | 0.0 | 1011 |
MS.gene05726.t1 | MTR_5g071360 | 87.654 | 486 | 59 | 1 | 6 | 491 | 26 | 510 | 0.0 | 902 |
MS.gene05726.t1 | MTR_3g464580 | 98.357 | 426 | 6 | 1 | 6 | 431 | 26 | 450 | 0.0 | 876 |
MS.gene05726.t1 | MTR_3g087220 | 75.327 | 535 | 131 | 1 | 6 | 540 | 26 | 559 | 0.0 | 874 |
MS.gene05726.t1 | MTR_5g069310 | 76.224 | 143 | 33 | 1 | 424 | 566 | 2 | 143 | 1.74e-70 | 223 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene05726.t1 | AT3G47340 | 81.495 | 562 | 100 | 3 | 6 | 566 | 26 | 584 | 0.0 | 971 |
MS.gene05726.t1 | AT5G10240 | 78.868 | 530 | 111 | 1 | 6 | 535 | 26 | 554 | 0.0 | 902 |
MS.gene05726.t1 | AT5G65010 | 78.327 | 526 | 113 | 1 | 6 | 531 | 26 | 550 | 0.0 | 894 |
MS.gene05726.t1 | AT5G10240 | 78.302 | 530 | 113 | 2 | 6 | 535 | 26 | 553 | 0.0 | 892 |
MS.gene05726.t1 | AT5G65010 | 78.368 | 527 | 112 | 2 | 6 | 531 | 26 | 551 | 0.0 | 891 |
MS.gene05726.t1 | AT3G47340 | 84.091 | 484 | 76 | 1 | 6 | 489 | 26 | 508 | 0.0 | 876 |
MS.gene05726.t1 | AT3G47340 | 83.715 | 393 | 63 | 1 | 6 | 398 | 26 | 417 | 0.0 | 713 |
MS.gene05726.t1 | AT3G47340 | 84.158 | 303 | 47 | 1 | 96 | 398 | 1 | 302 | 0.0 | 550 |
Find 130 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATGCGTATGTTGATTTAT+TGG | 0.205283 | 3.1:+48507676 | None:intergenic |
CTTCTTTGTTTGGTGCCTTA+TGG | 0.206839 | 3.1:+48507864 | None:intergenic |
TGAATTTCAGTTTACTATTC+AGG | 0.209606 | 3.1:-48508656 | MS.gene05726:intron |
TGGATTGCATCAGAATTAAA+AGG | 0.220309 | 3.1:-48509320 | MS.gene05726:CDS |
GGAGTCAAATGGGTGATTTC+TGG | 0.221522 | 3.1:-48507926 | MS.gene05726:CDS |
TCTATAGTAATATGCTTCTT+TGG | 0.249070 | 3.1:+48507072 | None:intergenic |
AGATTAGAAATTTCCATCTT+TGG | 0.261394 | 3.1:+48506677 | None:intergenic |
CACTTCCTTGTATATTGGTT+GGG | 0.269696 | 3.1:-48509453 | MS.gene05726:CDS |
CTTCTCTGGCTCTACAGTTT+TGG | 0.272062 | 3.1:+48506706 | None:intergenic |
GCCATTGTTGATCCTGCTTC+TGG | 0.280821 | 3.1:-48509934 | MS.gene05726:CDS |
CCAACATGGTGATAACTATT+TGG | 0.283627 | 3.1:-48509971 | MS.gene05726:CDS |
TTACCTTGCGGCATGTTTCT+TGG | 0.286349 | 3.1:+48507834 | None:intergenic |
TGGTTGGATTGATGGTATTA+AGG | 0.289578 | 3.1:-48507264 | MS.gene05726:CDS |
CTATTGAGTGGGATGCTTCT+TGG | 0.291336 | 3.1:-48506808 | MS.gene05726:CDS |
AAGATGGAAATTTCTAATCT+TGG | 0.303255 | 3.1:-48506674 | MS.gene05726:CDS |
TCAAGCAACCTTGATCCTTC+TGG | 0.306690 | 3.1:-48506785 | MS.gene05726:CDS |
ATTGTTTCCTGAGGTCTTCA+TGG | 0.316641 | 3.1:+48509747 | None:intergenic |
GATTACAGGCTGTGATAAAA+AGG | 0.326265 | 3.1:-48508999 | MS.gene05726:intron |
TGGTGAAACTCTTCTTTGTT+TGG | 0.329318 | 3.1:+48507854 | None:intergenic |
TTATGTTAGTATGAGGAGTA+TGG | 0.338204 | 3.1:-48509572 | MS.gene05726:intron |
TGGAGGTTTGGATTCTTCAT+TGG | 0.339121 | 3.1:-48508941 | MS.gene05726:CDS |
TCGGCAAGACTAACGGTTCC+TGG | 0.359524 | 3.1:-48506863 | MS.gene05726:CDS |
CTACTTCTCTTCCGGCCTTA+AGG | 0.361914 | 3.1:+48508704 | None:intergenic |
ATCTTTGGTATAATCTTCTC+TGG | 0.371278 | 3.1:+48506692 | None:intergenic |
TTGTTATTGTAGGTTCTGTT+TGG | 0.373539 | 3.1:-48509340 | MS.gene05726:intron |
GTTGGCTATGGTTGGATTGA+TGG | 0.373548 | 3.1:-48507272 | MS.gene05726:CDS |
CATTGATCCTGAGTACAAAA+TGG | 0.374006 | 3.1:-48507597 | MS.gene05726:intron |
GGTGTCACTTCCTTGTATAT+TGG | 0.374064 | 3.1:-48509458 | MS.gene05726:CDS |
CTCATTCTGTGTAGGACTTA+AGG | 0.378447 | 3.1:-48508851 | MS.gene05726:intron |
TATCATAAAATTCAGGTGAA+TGG | 0.381079 | 3.1:-48509782 | MS.gene05726:intron |
TATATTGGTTGGGGACTAGA+TGG | 0.381949 | 3.1:-48509443 | MS.gene05726:intron |
CACAAAAGCTGCTAAGCAAT+GGG | 0.391623 | 3.1:-48508887 | MS.gene05726:CDS |
AAAGTCTGCTACTTCTCTTC+CGG | 0.398299 | 3.1:+48508696 | None:intergenic |
CCTTCTGGAAGAGCAGCATT+TGG | 0.406608 | 3.1:-48506770 | MS.gene05726:CDS |
TGTGTACGGAATTTGTGATT+AGG | 0.411870 | 3.1:+48509722 | None:intergenic |
CATATGATGTAACCACAATC+AGG | 0.412177 | 3.1:-48507994 | MS.gene05726:CDS |
TCAAATCATCAGGAGTCAAA+TGG | 0.416775 | 3.1:-48507937 | MS.gene05726:CDS |
CTCAAAACAAGAGGATCATA+AGG | 0.417430 | 3.1:+48509173 | None:intergenic |
TCACTTCCTTGTATATTGGT+TGG | 0.418456 | 3.1:-48509454 | MS.gene05726:CDS |
TGCAGATTAAAGCTCTTCAT+AGG | 0.424217 | 3.1:-48507715 | MS.gene05726:intron |
TGGTGGAGCCCACTCCAGTC+TGG | 0.424835 | 3.1:+48509991 | None:intergenic |
TTAGGGTGCACCTGACCTTA+AGG | 0.431886 | 3.1:-48508719 | MS.gene05726:intron |
AGAGAAGATTATACCAAAGA+TGG | 0.434916 | 3.1:-48506690 | MS.gene05726:CDS |
AGAGGATCATAAGGGGTTGT+TGG | 0.435604 | 3.1:+48509182 | None:intergenic |
AAGAAGGAAGAATTGAGAAA+TGG | 0.439977 | 3.1:-48507478 | MS.gene05726:CDS |
AGGGTATTTGTATTTCCATA+AGG | 0.443024 | 3.1:-48507879 | MS.gene05726:CDS |
TCTCTTCCGGCCTTAAGGTC+AGG | 0.447008 | 3.1:+48508709 | None:intergenic |
ACTTCCTTGTATATTGGTTG+GGG | 0.453902 | 3.1:-48509452 | MS.gene05726:CDS |
TTGAGTACCTTAGGAAGGTA+AGG | 0.458332 | 3.1:+48507422 | None:intergenic |
TGTCTCATATTAGCTTTGAA+TGG | 0.461591 | 3.1:+48506646 | None:intergenic |
TCAAAACAAGAGGATCATAA+GGG | 0.462003 | 3.1:+48509174 | None:intergenic |
GAATTGAGAAATGGATACTA+AGG | 0.475694 | 3.1:-48507469 | MS.gene05726:CDS |
TAATATGCTTCTTTGGTAAG+TGG | 0.476674 | 3.1:+48507079 | None:intergenic |
TCTCGAAAGATCAAATCATC+AGG | 0.483191 | 3.1:-48507947 | MS.gene05726:CDS |
TGAAGCACCGTGGTCCAGAC+TGG | 0.485903 | 3.1:-48510005 | MS.gene05726:CDS |
CTGTGATGTTATTGCACACC+TGG | 0.486927 | 3.1:-48509693 | MS.gene05726:intron |
GTTCAGATAAAACATGAAGA+AGG | 0.489085 | 3.1:-48507494 | MS.gene05726:intron |
GCACAAAAGCTGCTAAGCAA+TGG | 0.493861 | 3.1:-48508888 | MS.gene05726:CDS |
CAAATCATCAGGAGTCAAAT+GGG | 0.497991 | 3.1:-48507936 | MS.gene05726:CDS |
TTGGTAAGTGGAGTGTTGAA+AGG | 0.504831 | 3.1:+48507091 | None:intergenic |
CTGCTCTTCCAGAAGGATCA+AGG | 0.507380 | 3.1:+48506777 | None:intergenic |
ATTGTTGCGAGGGATGCTAT+AGG | 0.511574 | 3.1:-48509479 | MS.gene05726:CDS |
AAGACCGGGAGTTTCGTAGA+TGG | 0.513657 | 3.1:-48509238 | MS.gene05726:CDS |
GGATTGCATCAGAATTAAAA+GGG | 0.514030 | 3.1:-48509319 | MS.gene05726:CDS |
GTGATGGAGTTGGCTATGGT+TGG | 0.516816 | 3.1:-48507280 | MS.gene05726:CDS |
CTGATGACTCACAAGCTAAG+AGG | 0.518775 | 3.1:-48511211 | MS.gene05726:CDS |
GGATGGCATAGATGCAATAG+AGG | 0.521917 | 3.1:-48508038 | MS.gene05726:CDS |
TTCAGTGATGGAGTTGGCTA+TGG | 0.523214 | 3.1:-48507284 | MS.gene05726:CDS |
AGAGGTTGATCACCAGAAGC+AGG | 0.531123 | 3.1:+48509922 | None:intergenic |
ATAACTATTTGGCTCATCAA+AGG | 0.533219 | 3.1:-48509960 | MS.gene05726:CDS |
ACTTGTACTCGAGCAAAGAC+CGG | 0.535273 | 3.1:-48509253 | MS.gene05726:CDS |
CTTGTACTCGAGCAAAGACC+GGG | 0.536345 | 3.1:-48509252 | MS.gene05726:CDS |
CAACAGTTTCATTGTTGCGA+GGG | 0.541209 | 3.1:-48509489 | MS.gene05726:CDS |
AGCAGTCACTGCTAGATACC+TGG | 0.543495 | 3.1:-48508914 | MS.gene05726:CDS |
TAGTAAACTGAAATTCATGA+TGG | 0.544517 | 3.1:+48508662 | None:intergenic |
TCTACAACCATGAAGACCTC+AGG | 0.544557 | 3.1:-48509754 | MS.gene05726:CDS |
AATAGTTATCACCATGTTGG+TGG | 0.545301 | 3.1:+48509974 | None:intergenic |
CAATAAATCAACATACGCAT+GGG | 0.548801 | 3.1:-48507675 | MS.gene05726:CDS |
AAATGGGTGATTTCTGGAGA+AGG | 0.550290 | 3.1:-48507920 | MS.gene05726:CDS |
ACCGTGGTCCAGACTGGAGT+GGG | 0.551709 | 3.1:-48509999 | MS.gene05726:CDS |
CAGAAGGAACAGTTCAGTGA+TGG | 0.554559 | 3.1:-48507296 | MS.gene05726:CDS |
CCAATAAATCAACATACGCA+TGG | 0.555802 | 3.1:-48507676 | MS.gene05726:CDS |
AGGTGTGGCTGCCCTGATTG+TGG | 0.560066 | 3.1:+48507982 | None:intergenic |
CCAAATGCTGCTCTTCCAGA+AGG | 0.561506 | 3.1:+48506770 | None:intergenic |
AAATTACACTCATTCTGTGT+AGG | 0.565107 | 3.1:-48508859 | MS.gene05726:CDS |
GGATTTCATCAAAGTTGCAA+TGG | 0.568271 | 3.1:-48507621 | MS.gene05726:CDS |
AGAGAATCCTTACCTTCCTA+AGG | 0.568467 | 3.1:-48507429 | MS.gene05726:intron |
TTTCGAGACATCAGAAACAT+AGG | 0.569570 | 3.1:+48507962 | None:intergenic |
TGTGAATCTTACCTTCTCAA+AGG | 0.571655 | 3.1:+48509145 | None:intergenic |
CATCACAGTCACATTGTGTA+CGG | 0.573999 | 3.1:+48509708 | None:intergenic |
TGATGACTCACAAGCTAAGA+GGG | 0.575223 | 3.1:-48511210 | MS.gene05726:intron |
TTTGAGGAACGCCTTTGAGA+AGG | 0.583912 | 3.1:-48509156 | MS.gene05726:intron |
ACTATAGAATGATCTTTGAG+AGG | 0.584236 | 3.1:-48507057 | MS.gene05726:CDS |
GTAGAACTCGGCAAGACTAA+CGG | 0.589213 | 3.1:-48506870 | MS.gene05726:intron |
CATGCAACACTAGCTCCTCC+AGG | 0.589828 | 3.1:+48506845 | None:intergenic |
TAGTCCCCAACCAATATACA+AGG | 0.591895 | 3.1:+48509448 | None:intergenic |
GAACAGTTCAGTGATGGAGT+TGG | 0.592459 | 3.1:-48507290 | MS.gene05726:CDS |
GGTGCACCTGACCTTAAGGC+CGG | 0.595098 | 3.1:-48508715 | MS.gene05726:CDS |
TTGATGACTGATGTGCCGTT+CGG | 0.596910 | 3.1:-48508976 | MS.gene05726:CDS |
TAGAGTTGAGTACCTTAGGA+AGG | 0.599420 | 3.1:+48507417 | None:intergenic |
CCAAATAGTTATCACCATGT+TGG | 0.601085 | 3.1:+48509971 | None:intergenic |
CACAGAGAAAGCTATTGAGT+GGG | 0.608617 | 3.1:-48506819 | MS.gene05726:CDS |
GCACAGAGAAAGCTATTGAG+TGG | 0.609213 | 3.1:-48506820 | MS.gene05726:CDS |
GATTTGTCTTCATTGAAGAG+AGG | 0.610358 | 3.1:+48509904 | None:intergenic |
CACCGTGGTCCAGACTGGAG+TGG | 0.611314 | 3.1:-48510000 | MS.gene05726:CDS |
AGACAAATCTATTATTGTCA+CGG | 0.614131 | 3.1:-48509890 | MS.gene05726:intron |
TGTACCATCTACGAAACTCC+CGG | 0.614554 | 3.1:+48509234 | None:intergenic |
GATTAGGCAATTGTTTCCTG+AGG | 0.616657 | 3.1:+48509738 | None:intergenic |
TGAGAAATGGATACTAAGGA+AGG | 0.617704 | 3.1:-48507465 | MS.gene05726:CDS |
GTCACTGCTAGATACCTGGC+TGG | 0.621089 | 3.1:-48508910 | MS.gene05726:CDS |
ATATGATGTAACCACAATCA+GGG | 0.627367 | 3.1:-48507993 | MS.gene05726:CDS |
AAGGCGTTCCTCAAAACAAG+AGG | 0.630369 | 3.1:+48509164 | None:intergenic |
GCCCACTCCAGTCTGGACCA+CGG | 0.634064 | 3.1:+48509998 | None:intergenic |
ACAACAGTTTCATTGTTGCG+AGG | 0.640177 | 3.1:-48509490 | MS.gene05726:CDS |
TGGAGTGGGCTCCACCAACA+TGG | 0.641715 | 3.1:-48509985 | MS.gene05726:CDS |
TTGCTCGAGTACAAGTGACC+AGG | 0.642279 | 3.1:+48509260 | None:intergenic |
CCAGATAGTAAAACACCGAA+CGG | 0.643802 | 3.1:+48508961 | None:intergenic |
CTCGAGTACAAGTGACCAGG+TGG | 0.647322 | 3.1:+48509263 | None:intergenic |
CAATCCTCCGTGGTTCAATG+AGG | 0.649428 | 3.1:-48509213 | MS.gene05726:CDS |
TCACCAAGAAACATGCCGCA+AGG | 0.655836 | 3.1:-48507837 | MS.gene05726:intron |
CAAAACAAGAGGATCATAAG+GGG | 0.657549 | 3.1:+48509175 | None:intergenic |
ACCAGAAGCAGGATCAACAA+TGG | 0.667593 | 3.1:+48509933 | None:intergenic |
ACAAAAGCTGCTAAGCAATG+GGG | 0.694915 | 3.1:-48508886 | MS.gene05726:CDS |
AGACATCAGAAACATAGGTG+TGG | 0.696093 | 3.1:+48507967 | None:intergenic |
GTAGATGGTACAATCCTCCG+TGG | 0.707926 | 3.1:-48509223 | MS.gene05726:CDS |
AATAAATCAACATACGCATG+GGG | 0.713947 | 3.1:-48507674 | MS.gene05726:CDS |
ATAACAGCCTCATTGAACCA+CGG | 0.715208 | 3.1:+48509206 | None:intergenic |
GCAAGACTAACGGTTCCTGG+AGG | 0.731795 | 3.1:-48506860 | MS.gene05726:CDS |
ACAGCCTCATTGAACCACGG+AGG | 0.790372 | 3.1:+48509209 | None:intergenic |
TGTCACAGATTGAAGCACCG+TGG | 0.798262 | 3.1:-48510015 | MS.gene05726:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAACATTCATTTA+AGG | - | chr3.1:48509083-48509102 | MS.gene05726:intron | 10.0% |
!! | AATAAAAAATAAAAAACTCT+AGG | + | chr3.1:48506846-48506865 | None:intergenic | 10.0% |
!! | ATATAATTATCCATTTATAT+TGG | - | chr3.1:48507298-48507317 | MS.gene05726:CDS | 10.0% |
!! | TAATAATTAATAAGTAACTT+TGG | - | chr3.1:48507774-48507793 | MS.gene05726:intron | 10.0% |
!! | TATAATTATCCATTTATATT+GGG | - | chr3.1:48507299-48507318 | MS.gene05726:CDS | 10.0% |
!!! | ATTCTTTATTAAATATTTTG+TGG | - | chr3.1:48509794-48509813 | MS.gene05726:intron | 10.0% |
!!! | TAAATTTTATCATAAAATTC+AGG | - | chr3.1:48508074-48508093 | MS.gene05726:intron | 10.0% |
!!! | TATAATTCTCTTTAAAATAT+TGG | + | chr3.1:48507264-48507283 | None:intergenic | 10.0% |
!!! | TTTTTTATTTTTGTATTTTG+TGG | - | chr3.1:48506857-48506876 | MS.gene05726:CDS | 10.0% |
!! | AACACTAATTAATACATATA+TGG | - | chr3.1:48507051-48507070 | MS.gene05726:CDS | 15.0% |
!! | ATAAACTATAGAATATTACT+AGG | + | chr3.1:48508010-48508029 | None:intergenic | 15.0% |
!! | CAAATTAAATTTGCAAATTA+TGG | + | chr3.1:48510497-48510516 | None:intergenic | 15.0% |
!! | GGATTATTAAAAAAATTCAA+TGG | - | chr3.1:48509059-48509078 | MS.gene05726:intron | 15.0% |
!! | TAAACTATAGAATATTACTA+GGG | + | chr3.1:48508009-48508028 | None:intergenic | 15.0% |
!! | TATATGGCTATAATATAATA+TGG | - | chr3.1:48507067-48507086 | MS.gene05726:CDS | 15.0% |
!!! | AAAATATTTTGGTTTTAAGA+GGG | - | chr3.1:48506998-48507017 | MS.gene05726:intron | 15.0% |
!!! | AAAGGGTATATTTATATAAA+AGG | + | chr3.1:48506749-48506768 | None:intergenic | 15.0% |
!!! | ATTAGCAATGTTTTAAATAA+AGG | + | chr3.1:48508235-48508254 | None:intergenic | 15.0% |
!!! | ATTGCTTTAATCTTTATTTA+TGG | - | chr3.1:48509113-48509132 | MS.gene05726:intron | 15.0% |
!!! | TAAGCAAAATTCTATTTTTT+AGG | - | chr3.1:48507373-48507392 | MS.gene05726:intron | 15.0% |
!!! | TAAGCAAAATTTTACTTTTT+AGG | + | chr3.1:48507462-48507481 | None:intergenic | 15.0% |
!!! | TAATTCTTACATTTTTAAGT+CGG | - | chr3.1:48508791-48508810 | MS.gene05726:intron | 15.0% |
!!! | TGGTTTTTTATTTTTTTCAA+TGG | + | chr3.1:48507240-48507259 | None:intergenic | 15.0% |
!!! | TTATTTTTTATGTTAGTATG+AGG | - | chr3.1:48508284-48508303 | MS.gene05726:intron | 15.0% |
!!! | TTTATATAAATATACCCTTT+TGG | - | chr3.1:48506749-48506768 | MS.gene05726:CDS | 15.0% |
!!! | TTTATTTTAATAAATCACGT+GGG | - | chr3.1:48507709-48507728 | MS.gene05726:CDS | 15.0% |
!!! | TTTTATTTTAATAAATCACG+TGG | - | chr3.1:48507708-48507727 | MS.gene05726:CDS | 15.0% |
!! | AAAATAAAAATTCCACATGT+AGG | + | chr3.1:48507697-48507716 | None:intergenic | 20.0% |
!! | AAATATCAAAGTTAACCAAA+AGG | + | chr3.1:48506767-48506786 | None:intergenic | 20.0% |
!! | AATAAACAAAAGTAAGACAT+GGG | - | chr3.1:48507590-48507609 | MS.gene05726:intron | 20.0% |
!! | AATATCAAAGTTAACCAAAA+GGG | + | chr3.1:48506766-48506785 | None:intergenic | 20.0% |
!! | CAACAAAAGTAAAATGAAAT+TGG | + | chr3.1:48510668-48510687 | None:intergenic | 20.0% |
!! | TACTAGAAAAATCACAAAAA+TGG | - | chr3.1:48507139-48507158 | MS.gene05726:intron | 20.0% |
!! | TGCTATATAGTATAATAAAG+TGG | - | chr3.1:48508041-48508060 | MS.gene05726:intron | 20.0% |
!!! | AATGGAAGTTCAAAATATTT+TGG | - | chr3.1:48506987-48507006 | MS.gene05726:intron | 20.0% |
!!! | ACATTTTTTATGATACCATA+GGG | - | chr3.1:48509756-48509775 | MS.gene05726:CDS | 20.0% |
!!! | ATTCTCTTTAAAATATTGGA+TGG | + | chr3.1:48507260-48507279 | None:intergenic | 20.0% |
!!! | CAAAATATTTTGGTTTTAAG+AGG | - | chr3.1:48506997-48507016 | MS.gene05726:intron | 20.0% |
!!! | GAATGAAAAATCAATTTTAG+TGG | - | chr3.1:48509038-48509057 | MS.gene05726:intron | 20.0% |
!!! | GAGTTTTTATTATATTGATG+AGG | - | chr3.1:48506954-48506973 | MS.gene05726:intron | 20.0% |
!!! | TATTTATGGTATGTTGATTA+GGG | - | chr3.1:48509127-48509146 | MS.gene05726:intron | 20.0% |
!!! | TGTTATTTTGATGCAATAAT+TGG | - | chr3.1:48507620-48507639 | MS.gene05726:CDS | 20.0% |
!!! | TTATTTATGGTATGTTGATT+AGG | - | chr3.1:48509126-48509145 | MS.gene05726:intron | 20.0% |
!!! | TTCTTGAAATTTTTTCGTAT+AGG | - | chr3.1:48510711-48510730 | MS.gene05726:intron | 20.0% |
!!! | TTTTTTCAATGGCAAAATAT+TGG | + | chr3.1:48507229-48507248 | None:intergenic | 20.0% |
! | AAGATGGAAATTTCTAATCT+TGG | - | chr3.1:48511189-48511208 | MS.gene05726:intron | 25.0% |
! | ACAACTAAAAGATAAGCATT+GGG | + | chr3.1:48507326-48507345 | None:intergenic | 25.0% |
! | ACCAAAATCAATAACATTCA+TGG | + | chr3.1:48508265-48508284 | None:intergenic | 25.0% |
! | AGACAAATCTATTATTGTCA+CGG | - | chr3.1:48507973-48507992 | MS.gene05726:CDS | 25.0% |
! | AGATTAGAAATTTCCATCTT+TGG | + | chr3.1:48511189-48511208 | None:intergenic | 25.0% |
! | ATAAAAAACTCTAGGTAAAG+AGG | + | chr3.1:48506838-48506857 | None:intergenic | 25.0% |
! | ATAAACAAAAGTAAGACATG+GGG | - | chr3.1:48507591-48507610 | MS.gene05726:intron | 25.0% |
! | ATTTGATTAGGCCTTTATTA+AGG | + | chr3.1:48510957-48510976 | None:intergenic | 25.0% |
! | CATTCAATAAATGATGTATG+TGG | - | chr3.1:48507398-48507417 | MS.gene05726:intron | 25.0% |
! | GAATAAACAAAAGTAAGACA+TGG | - | chr3.1:48507589-48507608 | MS.gene05726:intron | 25.0% |
! | GATAAGTGATATACAAGTAA+AGG | - | chr3.1:48507115-48507134 | MS.gene05726:CDS | 25.0% |
! | GATGTATGTAGTCTATTTAA+TGG | + | chr3.1:48507425-48507444 | None:intergenic | 25.0% |
! | TACAACTAAAAGATAAGCAT+TGG | + | chr3.1:48507327-48507346 | None:intergenic | 25.0% |
! | TAGACAAATACTATTTGAAG+TGG | + | chr3.1:48509632-48509651 | None:intergenic | 25.0% |
! | TAGTAAACTGAAATTCATGA+TGG | + | chr3.1:48509204-48509223 | None:intergenic | 25.0% |
! | TATCATAAAATTCAGGTGAA+TGG | - | chr3.1:48508081-48508100 | MS.gene05726:intron | 25.0% |
! | TATTGCATCAAAATAACATG+TGG | + | chr3.1:48507618-48507637 | None:intergenic | 25.0% |
! | TCTATAGTAATATGCTTCTT+TGG | + | chr3.1:48510794-48510813 | None:intergenic | 25.0% |
! | TGAATTTCAGTTTACTATTC+AGG | - | chr3.1:48509207-48509226 | MS.gene05726:CDS | 25.0% |
! | TTGAAGGAAAAAAAATGAAG+TGG | - | chr3.1:48510077-48510096 | MS.gene05726:intron | 25.0% |
!! | ATTTTGCTTATAATAGTGAC+CGG | - | chr3.1:48507472-48507491 | MS.gene05726:CDS | 25.0% |
!! | ATTTTGCTTATAATAGTGAC+CGG | + | chr3.1:48507491-48507472 | None:intergenic | 25.0% |
!! | ATTTTTATAACAATGTCGCT+TGG | + | chr3.1:48510875-48510894 | None:intergenic | 25.0% |
!! | TGAATAATTTGTGACAAGTT+TGG | - | chr3.1:48508493-48508512 | MS.gene05726:intron | 25.0% |
!! | TTTTGATGCAATAATTGGTT+CGG | - | chr3.1:48507625-48507644 | MS.gene05726:CDS | 25.0% |
!!! | AAATTAATTTGTCCTACATG+TGG | - | chr3.1:48507682-48507701 | MS.gene05726:CDS | 25.0% |
!!! | ACCATGAATGTTATTGATTT+TGG | - | chr3.1:48508261-48508280 | MS.gene05726:intron | 25.0% |
!!! | CACATTTTTTATGATACCAT+AGG | - | chr3.1:48509755-48509774 | MS.gene05726:CDS | 25.0% |
!!! | CATTTTTTATGATACCATAG+GGG | - | chr3.1:48509757-48509776 | MS.gene05726:CDS | 25.0% |
!!! | TCTTTTTCGTTGATTTTGTT+GGG | + | chr3.1:48507658-48507677 | None:intergenic | 25.0% |
!!! | TTCATTTTACTTTTGTTGCA+AGG | - | chr3.1:48510670-48510689 | MS.gene05726:intron | 25.0% |
AAACATACTTGACTTTGACA+AGG | - | chr3.1:48507516-48507535 | MS.gene05726:intron | 30.0% | |
AAATTACACTCATTCTGTGT+AGG | - | chr3.1:48509004-48509023 | MS.gene05726:intron | 30.0% | |
AAGAAGGAAGAATTGAGAAA+TGG | - | chr3.1:48510385-48510404 | MS.gene05726:intron | 30.0% | |
AATAAATCAACATACGCATG+GGG | - | chr3.1:48510189-48510208 | MS.gene05726:intron | 30.0% | |
ACTATAGAATGATCTTTGAG+AGG | - | chr3.1:48510806-48510825 | MS.gene05726:intron | 30.0% | |
AGAGAAGATTATACCAAAGA+TGG | - | chr3.1:48511173-48511192 | MS.gene05726:intron | 30.0% | |
AGTAGTTGAGATTGATATCA+AGG | - | chr3.1:48506896-48506915 | MS.gene05726:intron | 30.0% | |
ATATGATGTAACCACAATCA+GGG | - | chr3.1:48509870-48509889 | MS.gene05726:intron | 30.0% | |
ATCTTTGGTATAATCTTCTC+TGG | + | chr3.1:48511174-48511193 | None:intergenic | 30.0% | |
ATGAAATCCTTGTCCAAAAA+TGG | + | chr3.1:48510231-48510250 | None:intergenic | 30.0% | |
CAATAAATCAACATACGCAT+GGG | - | chr3.1:48510188-48510207 | MS.gene05726:intron | 30.0% | |
CATCAAAAACATTGATGTCA+TGG | - | chr3.1:48509586-48509605 | MS.gene05726:intron | 30.0% | |
GAATTGAGAAATGGATACTA+AGG | - | chr3.1:48510394-48510413 | MS.gene05726:intron | 30.0% | |
GCCTTTATTAAGGTTATGTT+GGG | + | chr3.1:48510947-48510966 | None:intergenic | 30.0% | |
GGATTGCATCAGAATTAAAA+GGG | - | chr3.1:48508544-48508563 | MS.gene05726:intron | 30.0% | |
GTTCAGATAAAACATGAAGA+AGG | - | chr3.1:48510369-48510388 | MS.gene05726:intron | 30.0% | |
TAATATGCTTCTTTGGTAAG+TGG | + | chr3.1:48510787-48510806 | None:intergenic | 30.0% | |
TCAAAACAAGAGGATCATAA+GGG | + | chr3.1:48508692-48508711 | None:intergenic | 30.0% | |
TCAAAATTGCGAAAAGATGT+GGG | - | chr3.1:48509262-48509281 | MS.gene05726:CDS | 30.0% | |
TCACTATGACATTTAATACG+AGG | + | chr3.1:48507184-48507203 | None:intergenic | 30.0% | |
TCCCAACATAACCTTAATAA+AGG | - | chr3.1:48510943-48510962 | MS.gene05726:intron | 30.0% | |
TGATTGATTAAGTTACCTGA+GGG | + | chr3.1:48510837-48510856 | None:intergenic | 30.0% | |
TGGACTTTATGTATATGAAC+AGG | + | chr3.1:48507747-48507766 | None:intergenic | 30.0% | |
TGGATTGCATCAGAATTAAA+AGG | - | chr3.1:48508543-48508562 | MS.gene05726:intron | 30.0% | |
TTATGTTAGTATGAGGAGTA+TGG | - | chr3.1:48508291-48508310 | MS.gene05726:intron | 30.0% | |
TTGATTGATTAAGTTACCTG+AGG | + | chr3.1:48510838-48510857 | None:intergenic | 30.0% | |
TTTGTGGTTTAGAAGTTCAT+GGG | - | chr3.1:48506873-48506892 | MS.gene05726:intron | 30.0% | |
! | AAATATTTTGTGGTCTATGC+AGG | - | chr3.1:48509804-48509823 | MS.gene05726:intron | 30.0% |
! | AATGTAGTTCTATTACCTTG+CGG | + | chr3.1:48510044-48510063 | None:intergenic | 30.0% |
! | AGAAAATTTTGTGGACATGT+TGG | - | chr3.1:48508314-48508333 | MS.gene05726:intron | 30.0% |
! | AGGGTATTTGTATTTCCATA+AGG | - | chr3.1:48509984-48510003 | MS.gene05726:CDS | 30.0% |
! | ATAACTATTTGGCTCATCAA+AGG | - | chr3.1:48507903-48507922 | MS.gene05726:CDS | 30.0% |
! | CAACTAAAAGATAAGCATTG+GGG | + | chr3.1:48507325-48507344 | None:intergenic | 30.0% |
! | TATCATACCATTTTGTACTC+AGG | + | chr3.1:48510276-48510295 | None:intergenic | 30.0% |
! | TATCTTTTCATTTGTTCTGC+TGG | - | chr3.1:48508341-48508360 | MS.gene05726:intron | 30.0% |
! | TCATGCAGCACATTTTATAT+AGG | - | chr3.1:48510544-48510563 | MS.gene05726:intron | 30.0% |
! | TTGATGTCATGGTCTTAATT+TGG | - | chr3.1:48509597-48509616 | MS.gene05726:intron | 30.0% |
! | TTGTTATTGTAGGTTCTGTT+TGG | - | chr3.1:48508523-48508542 | MS.gene05726:intron | 30.0% |
! | TTTTGTGGTTTAGAAGTTCA+TGG | - | chr3.1:48506872-48506891 | MS.gene05726:intron | 30.0% |
!!! | CTCTTTTTCGTTGATTTTGT+TGG | + | chr3.1:48507659-48507678 | None:intergenic | 30.0% |
AAAGTAGAGTTGAGTACCTT+AGG | + | chr3.1:48510453-48510472 | None:intergenic | 35.0% | |
AATAGTTATCACCATGTTGG+TGG | + | chr3.1:48507892-48507911 | None:intergenic | 35.0% | |
CAAAACAAGAGGATCATAAG+GGG | + | chr3.1:48508691-48508710 | None:intergenic | 35.0% | |
CAAATCATCAGGAGTCAAAT+GGG | - | chr3.1:48509927-48509946 | MS.gene05726:CDS | 35.0% | |
CATAATATTGTTTGCCCCTA+TGG | + | chr3.1:48509774-48509793 | None:intergenic | 35.0% | |
CATATGATGTAACCACAATC+AGG | - | chr3.1:48509869-48509888 | MS.gene05726:intron | 35.0% | |
CATTGATCCTGAGTACAAAA+TGG | - | chr3.1:48510266-48510285 | MS.gene05726:intron | 35.0% | |
CCAAATAGTTATCACCATGT+TGG | + | chr3.1:48507895-48507914 | None:intergenic | 35.0% | |
CCAACATGGTGATAACTATT+TGG | - | chr3.1:48507892-48507911 | MS.gene05726:CDS | 35.0% | |
CCAATAAATCAACATACGCA+TGG | - | chr3.1:48510187-48510206 | MS.gene05726:intron | 35.0% | |
CGAAAAGTTGCAGTCAAATA+GGG | - | chr3.1:48509662-48509681 | MS.gene05726:intron | 35.0% | |
CGAAACACAGAGATTTGATT+AGG | + | chr3.1:48510969-48510988 | None:intergenic | 35.0% | |
CGATTGATGTGTTTGATTAC+AGG | - | chr3.1:48508850-48508869 | MS.gene05726:intron | 35.0% | |
CTCAAAACAAGAGGATCATA+AGG | + | chr3.1:48508693-48508712 | None:intergenic | 35.0% | |
CTCAAAATTGCGAAAAGATG+TGG | - | chr3.1:48509261-48509280 | MS.gene05726:CDS | 35.0% | |
GATTACAGGCTGTGATAAAA+AGG | - | chr3.1:48508864-48508883 | MS.gene05726:CDS | 35.0% | |
GATTTGTCTTCATTGAAGAG+AGG | + | chr3.1:48507962-48507981 | None:intergenic | 35.0% | |
GGACAGAAATTGCAGTAAAT+GGG | + | chr3.1:48510476-48510495 | None:intergenic | 35.0% | |
GGATTTCATCAAAGTTGCAA+TGG | - | chr3.1:48510242-48510261 | MS.gene05726:intron | 35.0% | |
GGCCTTTATTAAGGTTATGT+TGG | + | chr3.1:48510948-48510967 | None:intergenic | 35.0% | |
TCAAATCATCAGGAGTCAAA+TGG | - | chr3.1:48509926-48509945 | MS.gene05726:CDS | 35.0% | |
TCACTTCCTTGTATATTGGT+TGG | - | chr3.1:48508409-48508428 | MS.gene05726:intron | 35.0% | |
TCTCGAAAGATCAAATCATC+AGG | - | chr3.1:48509916-48509935 | MS.gene05726:CDS | 35.0% | |
TGAGAAATGGATACTAAGGA+AGG | - | chr3.1:48510398-48510417 | MS.gene05726:intron | 35.0% | |
TGATGAGGAAGAATGAAGAA+TGG | - | chr3.1:48506969-48506988 | MS.gene05726:intron | 35.0% | |
TGCAGATTAAAGCTCTTCAT+AGG | - | chr3.1:48510148-48510167 | MS.gene05726:intron | 35.0% | |
TGGACAGAAATTGCAGTAAA+TGG | + | chr3.1:48510477-48510496 | None:intergenic | 35.0% | |
TGGTGAAACTCTTCTTTGTT+TGG | + | chr3.1:48510012-48510031 | None:intergenic | 35.0% | |
TGTGAATCTTACCTTCTCAA+AGG | + | chr3.1:48508721-48508740 | None:intergenic | 35.0% | |
TGTGTACGGAATTTGTGATT+AGG | + | chr3.1:48508144-48508163 | None:intergenic | 35.0% | |
TTTCGAGACATCAGAAACAT+AGG | + | chr3.1:48509904-48509923 | None:intergenic | 35.0% | |
! | AATTTTGTGGACATGTTGGA+TGG | - | chr3.1:48508318-48508337 | MS.gene05726:intron | 35.0% |
! | ACTTCCTTGTATATTGGTTG+GGG | - | chr3.1:48508411-48508430 | MS.gene05726:intron | 35.0% |
! | AGAGAAGTAGCAGACTTTTT+AGG | - | chr3.1:48509172-48509191 | MS.gene05726:CDS | 35.0% |
! | CACTTCCTTGTATATTGGTT+GGG | - | chr3.1:48508410-48508429 | MS.gene05726:intron | 35.0% |
! | GAAGGATCTGATGAGATTTT+TGG | - | chr3.1:48509961-48509980 | MS.gene05726:CDS | 35.0% |
! | GCACATTTTATATAGGCAGA+AGG | - | chr3.1:48510551-48510570 | MS.gene05726:intron | 35.0% |
! | GGAGTATGGAGAAAATTTTG+TGG | - | chr3.1:48508305-48508324 | MS.gene05726:intron | 35.0% |
! | GTGTTTCGATTTGTAGAACT+CGG | - | chr3.1:48510981-48511000 | MS.gene05726:intron | 35.0% |
! | TGGTTGGATTGATGGTATTA+AGG | - | chr3.1:48510599-48510618 | MS.gene05726:intron | 35.0% |
! | TGTTTACATGTTTTGCAGCA+TGG | + | chr3.1:48510626-48510645 | None:intergenic | 35.0% |
! | TGTTTTACTATCTGGAGGTT+TGG | - | chr3.1:48508910-48508929 | MS.gene05726:CDS | 35.0% |
!! | AGAAGCTAGAGTACCATTTT+TGG | - | chr3.1:48510215-48510234 | MS.gene05726:intron | 35.0% |
!! | CCATGCGTATGTTGATTTAT+TGG | + | chr3.1:48510190-48510209 | None:intergenic | 35.0% |
!! | GATCTGATGAGATTTTTGGA+GGG | - | chr3.1:48509965-48509984 | MS.gene05726:CDS | 35.0% |
!! | TAGAGTACCATTTTTGGACA+AGG | - | chr3.1:48510221-48510240 | MS.gene05726:intron | 35.0% |
!!! | CATTTTGAAGTTTTTCCACC+TGG | - | chr3.1:48508585-48508604 | MS.gene05726:intron | 35.0% |
!!! | CTTATGATCCTCTTGTTTTG+AGG | - | chr3.1:48508691-48508710 | MS.gene05726:CDS | 35.0% |
!!! | TGGCACGTTTTTGTTATTGT+AGG | - | chr3.1:48508513-48508532 | MS.gene05726:intron | 35.0% |
AAACACGTTGACCAGAGATA+CGG | - | chr3.1:48508740-48508759 | MS.gene05726:intron | 40.0% | |
ACAAAAGCTGCTAAGCAATG+GGG | - | chr3.1:48508977-48508996 | MS.gene05726:CDS | 40.0% | |
ACAACAGTTTCATTGTTGCG+AGG | - | chr3.1:48508373-48508392 | MS.gene05726:intron | 40.0% | |
AGAAGTCACAGTCTAGATTG+TGG | - | chr3.1:48509729-48509748 | MS.gene05726:CDS | 40.0% | |
AGACATCAGAAACATAGGTG+TGG | + | chr3.1:48509899-48509918 | None:intergenic | 40.0% | |
AGAGAATCCTTACCTTCCTA+AGG | - | chr3.1:48510434-48510453 | MS.gene05726:intron | 40.0% | |
ATAACAGCCTCATTGAACCA+CGG | + | chr3.1:48508660-48508679 | None:intergenic | 40.0% | |
ATTACATCGCTCGTGTTTGA+AGG | - | chr3.1:48510061-48510080 | MS.gene05726:intron | 40.0% | |
ATTGTTTCCTGAGGTCTTCA+TGG | + | chr3.1:48508119-48508138 | None:intergenic | 40.0% | |
CAAATTCTGATGTGACACCA+AGG | + | chr3.1:48509468-48509487 | None:intergenic | 40.0% | |
CAACAGTTTCATTGTTGCGA+GGG | - | chr3.1:48508374-48508393 | MS.gene05726:intron | 40.0% | |
CACAAAAGCTGCTAAGCAAT+GGG | - | chr3.1:48508976-48508995 | MS.gene05726:CDS | 40.0% | |
CACAGAGAAAGCTATTGAGT+GGG | - | chr3.1:48511044-48511063 | MS.gene05726:intron | 40.0% | |
CATCACAGTCACATTGTGTA+CGG | + | chr3.1:48508158-48508177 | None:intergenic | 40.0% | |
CATGCAGACATCAAAAACCT+TGG | - | chr3.1:48509448-48509467 | MS.gene05726:CDS | 40.0% | |
CCAGATAGTAAAACACCGAA+CGG | + | chr3.1:48508905-48508924 | None:intergenic | 40.0% | |
CCTAAACTATTTACACCCTC+CGG | + | chr3.1:48507494-48507513 | None:intergenic | 40.0% | |
CGAAAAGATGTGGGCAAATA+GGG | - | chr3.1:48509271-48509290 | MS.gene05726:CDS | 40.0% | |
CTCAAAATTGCGAAGAGTTG+CGG | - | chr3.1:48509521-48509540 | MS.gene05726:CDS | 40.0% | |
CTCATTCTGTGTAGGACTTA+AGG | - | chr3.1:48509012-48509031 | MS.gene05726:intron | 40.0% | |
GATTAGGCAATTGTTTCCTG+AGG | + | chr3.1:48508128-48508147 | None:intergenic | 40.0% | |
GCGAAAAGTTGCAGTCAAAT+AGG | - | chr3.1:48509661-48509680 | MS.gene05726:intron | 40.0% | |
GGTAAAGAGGAGTTTGATCA+TGG | + | chr3.1:48506825-48506844 | None:intergenic | 40.0% | |
TAGAGTTGAGTACCTTAGGA+AGG | + | chr3.1:48510449-48510468 | None:intergenic | 40.0% | |
TAGTCCCCAACCAATATACA+AGG | + | chr3.1:48508418-48508437 | None:intergenic | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | - | chr3.1:48507476-48507495 | MS.gene05726:CDS | 40.0% | |
TGCTTATAATAGTGACCGGA+GGG | + | chr3.1:48507495-48507476 | None:intergenic | 40.0% | |
TGGAGGTTTGGATTCTTCAT+TGG | - | chr3.1:48508922-48508941 | MS.gene05726:CDS | 40.0% | |
TTATGTCGCAGTCTTTACTG+TGG | - | chr3.1:48509337-48509356 | MS.gene05726:intron | 40.0% | |
TTGAGTACCTTAGGAAGGTA+AGG | + | chr3.1:48510444-48510463 | None:intergenic | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | - | chr3.1:48507475-48507494 | MS.gene05726:CDS | 40.0% | |
TTGCTTATAATAGTGACCGG+AGG | + | chr3.1:48507494-48507475 | None:intergenic | 40.0% | |
! | AAAGTCTGCTACTTCTCTTC+CGG | + | chr3.1:48509170-48509189 | None:intergenic | 40.0% |
! | AAATGGGTGATTTCTGGAGA+AGG | - | chr3.1:48509943-48509962 | MS.gene05726:CDS | 40.0% |
! | ATTTTGTGGTCTATGCAGGA+TGG | - | chr3.1:48509808-48509827 | MS.gene05726:intron | 40.0% |
! | CAAAGTCGCATCAGTGTTTT+TGG | + | chr3.1:48509548-48509567 | None:intergenic | 40.0% |
! | TATATTGGTTGGGGACTAGA+TGG | - | chr3.1:48508420-48508439 | MS.gene05726:intron | 40.0% |
!! | CTTCTTTGTTTGGTGCCTTA+TGG | + | chr3.1:48510002-48510021 | None:intergenic | 40.0% |
!! | GGATCTGATGAGATTTTTGG+AGG | - | chr3.1:48509964-48509983 | MS.gene05726:CDS | 40.0% |
!! | GGTGTCACTTCCTTGTATAT+TGG | - | chr3.1:48508405-48508424 | MS.gene05726:intron | 40.0% |
!! | TTGGTAAGTGGAGTGTTGAA+AGG | + | chr3.1:48510775-48510794 | None:intergenic | 40.0% |
!! | TTTTGGCAACTGAGTTGACT+TGG | + | chr3.1:48511143-48511162 | None:intergenic | 40.0% |
!!! | TTCGGTGTTTTACTATCTGG+AGG | - | chr3.1:48508905-48508924 | MS.gene05726:CDS | 40.0% |
ACCAGAAGCAGGATCAACAA+TGG | + | chr3.1:48507933-48507952 | None:intergenic | 45.0% | |
ACTTGTACTCGAGCAAAGAC+CGG | - | chr3.1:48508610-48508629 | MS.gene05726:intron | 45.0% | |
AGAGGATCATAAGGGGTTGT+TGG | + | chr3.1:48508684-48508703 | None:intergenic | 45.0% | |
ATTGTTGCGAGGGATGCTAT+AGG | - | chr3.1:48508384-48508403 | MS.gene05726:intron | 45.0% | |
CAGAAGGAACAGTTCAGTGA+TGG | - | chr3.1:48510567-48510586 | MS.gene05726:intron | 45.0% | |
CTATTGAGTGGGATGCTTCT+TGG | - | chr3.1:48511055-48511074 | MS.gene05726:intron | 45.0% | |
CTGTGATGTTATTGCACACC+TGG | - | chr3.1:48508170-48508189 | MS.gene05726:intron | 45.0% | |
GCACAAAAGCTGCTAAGCAA+TGG | - | chr3.1:48508975-48508994 | MS.gene05726:CDS | 45.0% | |
GCACAGAGAAAGCTATTGAG+TGG | - | chr3.1:48511043-48511062 | MS.gene05726:intron | 45.0% | |
GCATTGGGGCCCAATATAAA+TGG | + | chr3.1:48507311-48507330 | None:intergenic | 45.0% | |
GCGAAAAGATGTGGGCAAAT+AGG | - | chr3.1:48509270-48509289 | MS.gene05726:CDS | 45.0% | |
GGAGTCAAATGGGTGATTTC+TGG | - | chr3.1:48509937-48509956 | MS.gene05726:CDS | 45.0% | |
GGATGGCATAGATGCAATAG+AGG | - | chr3.1:48509825-48509844 | MS.gene05726:intron | 45.0% | |
GTAGAACTCGGCAAGACTAA+CGG | - | chr3.1:48510993-48511012 | MS.gene05726:intron | 45.0% | |
GTTGGCTATGGTTGGATTGA+TGG | - | chr3.1:48510591-48510610 | MS.gene05726:intron | 45.0% | |
TCAAGCAACCTTGATCCTTC+TGG | - | chr3.1:48511078-48511097 | MS.gene05726:intron | 45.0% | |
TCTACAACCATGAAGACCTC+AGG | - | chr3.1:48508109-48508128 | MS.gene05726:intron | 45.0% | |
TGTACCATCTACGAAACTCC+CGG | + | chr3.1:48508632-48508651 | None:intergenic | 45.0% | |
TTACCTTGCGGCATGTTTCT+TGG | + | chr3.1:48510032-48510051 | None:intergenic | 45.0% | |
! | AAGGCGTTCCTCAAAACAAG+AGG | + | chr3.1:48508702-48508721 | None:intergenic | 45.0% |
! | CCGGAGGGTGTAAATAGTTT+AGG | - | chr3.1:48507491-48507510 | MS.gene05726:CDS | 45.0% |
! | CTCTTTTCAGACCGTATCTC+TGG | + | chr3.1:48508754-48508773 | None:intergenic | 45.0% |
! | GAACAGTTCAGTGATGGAGT+TGG | - | chr3.1:48510573-48510592 | MS.gene05726:intron | 45.0% |
! | GTTGTAACTTGTACACCCTC+CGG | - | chr3.1:48507341-48507360 | MS.gene05726:intron | 45.0% |
! | TTCAGTGATGGAGTTGGCTA+TGG | - | chr3.1:48510579-48510598 | MS.gene05726:intron | 45.0% |
! | TTGATGACTGATGTGCCGTT+CGG | - | chr3.1:48508887-48508906 | MS.gene05726:CDS | 45.0% |
! | TTTGAGGAACGCCTTTGAGA+AGG | - | chr3.1:48508707-48508726 | MS.gene05726:CDS | 45.0% |
!! | CTTTGAGAGGTTTTTCCCTC+AGG | - | chr3.1:48510819-48510838 | MS.gene05726:intron | 45.0% |
!!! | CCGTTCGGTGTTTTACTATC+TGG | - | chr3.1:48508902-48508921 | MS.gene05726:CDS | 45.0% |
!!! | CTTCTCTGGCTCTACAGTTT+TGG | + | chr3.1:48511160-48511179 | None:intergenic | 45.0% |
!! | TTATTAATTATTATTCTAAT+TGG | + | chr3.1:48507767-48507786 | None:intergenic | 5.0% |
!!! | TTTTTTTAAAAAATTTAACA+TGG | - | chr3.1:48506932-48506951 | MS.gene05726:intron | 5.0% |
AAGACCGGGAGTTTCGTAGA+TGG | - | chr3.1:48508625-48508644 | MS.gene05726:intron | 50.0% | |
AGCAGTCACTGCTAGATACC+TGG | - | chr3.1:48508949-48508968 | MS.gene05726:CDS | 50.0% | |
ATTGCCTGCGAGAAAGCTCA+AGG | + | chr3.1:48506686-48506705 | None:intergenic | 50.0% | |
CAATCCTCCGTGGTTCAATG+AGG | - | chr3.1:48508650-48508669 | MS.gene05726:intron | 50.0% | |
CCAAATGCTGCTCTTCCAGA+AGG | + | chr3.1:48511096-48511115 | None:intergenic | 50.0% | |
CTACTTCTCTTCCGGCCTTA+AGG | + | chr3.1:48509162-48509181 | None:intergenic | 50.0% | |
CTGCTCTTCCAGAAGGATCA+AGG | + | chr3.1:48511089-48511108 | None:intergenic | 50.0% | |
CTTGTACTCGAGCAAAGACC+GGG | - | chr3.1:48508611-48508630 | MS.gene05726:intron | 50.0% | |
GCCATTGTTGATCCTGCTTC+TGG | - | chr3.1:48507929-48507948 | MS.gene05726:CDS | 50.0% | |
GTAGATGGTACAATCCTCCG+TGG | - | chr3.1:48508640-48508659 | MS.gene05726:intron | 50.0% | |
TCACCAAGAAACATGCCGCA+AGG | - | chr3.1:48510026-48510045 | MS.gene05726:intron | 50.0% | |
TTAGGGTGCACCTGACCTTA+AGG | - | chr3.1:48509144-48509163 | MS.gene05726:intron | 50.0% | |
TTGCTCGAGTACAAGTGACC+AGG | + | chr3.1:48508606-48508625 | None:intergenic | 50.0% | |
! | AGAGGTTGATCACCAGAAGC+AGG | + | chr3.1:48507944-48507963 | None:intergenic | 50.0% |
! | CCTTCTGGAAGAGCAGCATT+TGG | - | chr3.1:48511093-48511112 | MS.gene05726:intron | 50.0% |
! | GTGATGGAGTTGGCTATGGT+TGG | - | chr3.1:48510583-48510602 | MS.gene05726:intron | 50.0% |
!! | TGTCACAGATTGAAGCACCG+TGG | - | chr3.1:48507848-48507867 | MS.gene05726:CDS | 50.0% |
ACAGCCTCATTGAACCACGG+AGG | + | chr3.1:48508657-48508676 | None:intergenic | 55.0% | |
CACACCTGGTTAGTATGCCG+CGG | - | chr3.1:48508184-48508203 | MS.gene05726:intron | 55.0% | |
CATGCAACACTAGCTCCTCC+AGG | + | chr3.1:48511021-48511040 | None:intergenic | 55.0% | |
CTCGAGTACAAGTGACCAGG+TGG | + | chr3.1:48508603-48508622 | None:intergenic | 55.0% | |
GCAAGACTAACGGTTCCTGG+AGG | - | chr3.1:48511003-48511022 | MS.gene05726:intron | 55.0% | |
GCATCCTTGAGCTTTCTCGC+AGG | - | chr3.1:48506679-48506698 | MS.gene05726:CDS | 55.0% | |
GTATGCCGCGGTCTAGATTG+TGG | - | chr3.1:48508196-48508215 | MS.gene05726:intron | 55.0% | |
GTCACTGCTAGATACCTGGC+TGG | - | chr3.1:48508953-48508972 | MS.gene05726:CDS | 55.0% | |
TAGACCGCGGCATACTAACC+AGG | + | chr3.1:48508191-48508210 | None:intergenic | 55.0% | |
TCGGCAAGACTAACGGTTCC+TGG | - | chr3.1:48511000-48511019 | MS.gene05726:intron | 55.0% | |
TCTCTTCCGGCCTTAAGGTC+AGG | + | chr3.1:48509157-48509176 | None:intergenic | 55.0% | |
! | TAGCAGCTTTTGTGCCAGCC+AGG | + | chr3.1:48508970-48508989 | None:intergenic | 55.0% |
ACCGTGGTCCAGACTGGAGT+GGG | - | chr3.1:48507864-48507883 | MS.gene05726:CDS | 60.0% | |
AGGTGTGGCTGCCCTGATTG+TGG | + | chr3.1:48509884-48509903 | None:intergenic | 60.0% | |
CGCGACCACAATCTAGACCG+CGG | + | chr3.1:48508204-48508223 | None:intergenic | 60.0% | |
CGCGGTCTAGATTGTGGTCG+CGG | - | chr3.1:48508202-48508221 | MS.gene05726:intron | 60.0% | |
CTAGATTGTGGTCGCGGTCG+CGG | - | chr3.1:48508208-48508227 | MS.gene05726:intron | 60.0% | |
GGTGCACCTGACCTTAAGGC+CGG | - | chr3.1:48509148-48509167 | MS.gene05726:intron | 60.0% | |
! | TGGAGTGGGCTCCACCAACA+TGG | - | chr3.1:48507878-48507897 | MS.gene05726:CDS | 60.0% |
!! | TGAAGCACCGTGGTCCAGAC+TGG | - | chr3.1:48507858-48507877 | MS.gene05726:CDS | 60.0% |
CACCGTGGTCCAGACTGGAG+TGG | - | chr3.1:48507863-48507882 | MS.gene05726:CDS | 65.0% | |
GCCCACTCCAGTCTGGACCA+CGG | + | chr3.1:48507868-48507887 | None:intergenic | 65.0% | |
TGGTGGAGCCCACTCCAGTC+TGG | + | chr3.1:48507875-48507894 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 48506655 | 48511230 | 48506655 | ID=MS.gene05726 |
chr3.1 | mRNA | 48506655 | 48511230 | 48506655 | ID=MS.gene05726.t1;Parent=MS.gene05726 |
chr3.1 | exon | 48511211 | 48511230 | 48511211 | ID=MS.gene05726.t1.exon1;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48511211 | 48511230 | 48511211 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48509891 | 48510029 | 48509891 | ID=MS.gene05726.t1.exon2;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48509891 | 48510029 | 48509891 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48509694 | 48509789 | 48509694 | ID=MS.gene05726.t1.exon3;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48509694 | 48509789 | 48509694 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48509444 | 48509585 | 48509444 | ID=MS.gene05726.t1.exon4;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48509444 | 48509585 | 48509444 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48509157 | 48509350 | 48509157 | ID=MS.gene05726.t1.exon5;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48509157 | 48509350 | 48509157 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48508852 | 48509013 | 48508852 | ID=MS.gene05726.t1.exon6;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48508852 | 48509013 | 48508852 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48508657 | 48508737 | 48508657 | ID=MS.gene05726.t1.exon7;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48508657 | 48508737 | 48508657 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48507838 | 48508059 | 48507838 | ID=MS.gene05726.t1.exon8;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48507838 | 48508059 | 48507838 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48507598 | 48507732 | 48507598 | ID=MS.gene05726.t1.exon9;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48507598 | 48507732 | 48507598 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48507430 | 48507510 | 48507430 | ID=MS.gene05726.t1.exon10;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48507430 | 48507510 | 48507430 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48507247 | 48507333 | 48507247 | ID=MS.gene05726.t1.exon11;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48507247 | 48507333 | 48507247 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48507045 | 48507152 | 48507045 | ID=MS.gene05726.t1.exon12;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48507045 | 48507152 | 48507045 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
chr3.1 | exon | 48506655 | 48506888 | 48506655 | ID=MS.gene05726.t1.exon13;Parent=MS.gene05726.t1 |
chr3.1 | CDS | 48506655 | 48506888 | 48506655 | ID=cds.MS.gene05726.t1;Parent=MS.gene05726.t1 |
Gene Sequence |
Protein sequence |