AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene26812

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26812.t1 MTR_4g123040 77.143 315 7 2 1 250 1 315 3.61e-152 426
MS.gene26812.t1 MTR_1g086530 47.510 261 99 7 17 248 26 277 7.62e-74 226
MS.gene26812.t1 MTR_2g033170 77.419 155 23 1 1 143 1 155 4.34e-73 226
MS.gene26812.t1 MTR_2g033170 56.566 99 37 4 152 250 237 329 4.12e-20 87.8
MS.gene26812.t1 MTR_1g086510 69.286 140 31 1 16 143 13 152 1.01e-68 213
MS.gene26812.t1 MTR_1g110460 52.153 209 67 5 16 212 20 207 5.49e-62 197
MS.gene26812.t1 MTR_7g035075 70.175 114 22 1 17 118 7 120 1.36e-52 169
MS.gene26812.t1 MTR_6g006030 69.725 109 21 1 23 119 13 121 7.70e-51 165
MS.gene26812.t1 MTR_1g045610 60.000 105 30 1 25 117 22 126 1.80e-39 137
MS.gene26812.t1 MTR_1g073170 57.843 102 31 1 25 114 21 122 1.43e-37 132
MS.gene26812.t1 MTR_8g027345 52.941 119 42 3 21 125 9 127 3.91e-35 127
MS.gene26812.t1 MTR_7g117730 55.455 110 37 2 20 117 8 117 2.32e-34 124
MS.gene26812.t1 MTR_4g125520 55.963 109 36 2 24 120 12 120 2.91e-34 125
MS.gene26812.t1 MTR_2g089620 55.340 103 34 2 24 114 12 114 6.20e-34 125
MS.gene26812.t1 MTR_3g083540 57.547 106 33 2 21 114 38 143 8.26e-34 124
MS.gene26812.t1 MTR_5g029840 48.031 127 52 3 20 134 8 132 9.53e-34 124
MS.gene26812.t1 MTR_2g011660 50.450 111 43 2 24 122 13 123 2.39e-33 124
MS.gene26812.t1 MTR_1g076150 43.448 145 63 3 21 153 9 146 3.18e-33 121
MS.gene26812.t1 MTR_1g017000 53.846 104 35 3 24 114 12 115 8.05e-33 120
MS.gene26812.t1 MTR_4g091490 50.450 111 43 2 24 122 13 123 8.83e-33 122
MS.gene26812.t1 MTR_4g063100 49.074 108 43 1 25 120 8 115 2.01e-32 119
MS.gene26812.t1 MTR_2g096380 48.182 110 45 1 23 120 5 114 2.11e-32 118
MS.gene26812.t1 MTR_3g052450 46.847 111 47 1 20 118 36 146 2.42e-32 124
MS.gene26812.t1 MTR_7g011170 47.368 114 48 2 21 122 9 122 3.83e-32 120
MS.gene26812.t1 MTR_1g100653 52.336 107 39 2 24 118 12 118 5.59e-32 119
MS.gene26812.t1 MTR_6g012690 47.826 115 48 2 20 122 8 122 6.33e-32 120
MS.gene26812.t1 MTR_3g052430 48.148 108 44 1 23 118 40 147 6.62e-32 122
MS.gene26812.t1 MTR_1g043080 32.653 245 124 7 24 231 12 252 8.25e-32 117
MS.gene26812.t1 MTR_8g098860 49.550 111 44 2 20 118 8 118 8.64e-32 119
MS.gene26812.t1 MTR_3g074520 45.455 132 56 3 20 135 8 139 9.28e-32 119
MS.gene26812.t1 MTR_7g115650 47.706 109 45 2 22 118 10 118 9.75e-32 116
MS.gene26812.t1 MTR_7g096930 38.150 173 93 3 21 179 9 181 1.41e-31 117
MS.gene26812.t1 MTR_4g478180 49.565 115 46 2 20 122 9 123 1.48e-31 119
MS.gene26812.t1 MTR_5g007370 48.696 115 47 2 20 122 8 122 4.24e-31 117
MS.gene26812.t1 MTR_4g073420 54.455 101 34 2 26 114 14 114 4.79e-31 116
MS.gene26812.t1 MTR_7g076740 48.718 117 47 3 24 127 12 128 5.53e-31 116
MS.gene26812.t1 MTR_4g100720 51.376 109 41 2 24 120 13 121 6.22e-31 113
MS.gene26812.t1 MTR_4g121460 51.887 106 39 2 21 114 9 114 7.45e-31 117
MS.gene26812.t1 MTR_3g097450 54.455 101 34 2 26 114 14 114 8.30e-31 116
MS.gene26812.t1 MTR_1g085040 48.276 116 48 2 24 127 12 127 9.08e-31 117
MS.gene26812.t1 MTR_5g010020 54.455 101 34 2 20 108 8 108 1.12e-30 116
MS.gene26812.t1 MTR_8g031360 51.376 109 40 3 19 114 8 116 1.28e-30 115
MS.gene26812.t1 MTR_2g099740 48.598 107 43 2 20 114 8 114 1.32e-30 117
MS.gene26812.t1 MTR_5g079670 44.068 118 54 2 23 128 10 127 1.36e-30 113
MS.gene26812.t1 MTR_4g082290 45.455 121 54 2 21 129 9 129 1.46e-30 117
MS.gene26812.t1 MTR_1g062940 50.962 104 39 1 23 114 5 108 1.52e-30 113
MS.gene26812.t1 MTR_4g485530 35.838 173 87 3 21 169 9 181 1.83e-30 112
MS.gene26812.t1 MTR_1g043050 39.521 167 79 4 24 171 12 175 1.95e-30 114
MS.gene26812.t1 MTR_2g097910 49.074 108 43 2 24 119 20 127 2.38e-30 115
MS.gene26812.t1 MTR_4g082230 45.455 121 54 2 21 129 9 129 2.42e-30 117
MS.gene26812.t1 MTR_3g011610 50.485 103 39 2 24 114 37 139 2.56e-30 118
MS.gene26812.t1 MTR_8g095390 53.465 101 35 2 26 114 14 114 3.12e-30 115
MS.gene26812.t1 MTR_8g017440 48.598 107 43 2 20 114 8 114 5.91e-30 114
MS.gene26812.t1 MTR_8g042410 51.456 103 38 2 24 114 37 139 8.12e-30 117
MS.gene26812.t1 MTR_8g017500 47.664 107 44 2 20 114 8 114 8.88e-30 114
MS.gene26812.t1 MTR_8g020490 49.541 109 42 3 23 118 7 115 9.08e-30 112
MS.gene26812.t1 MTR_1g021230 50.000 106 41 2 24 117 57 162 9.39e-30 115
MS.gene26812.t1 MTR_7g110830 48.649 111 45 2 24 122 12 122 1.79e-29 114
MS.gene26812.t1 MTR_4g065017 48.148 108 44 2 24 119 17 124 2.96e-29 112
MS.gene26812.t1 MTR_8g017540 47.664 107 44 2 20 114 54 160 3.16e-29 114
MS.gene26812.t1 MTR_5g078140 45.217 115 51 2 20 122 8 122 6.18e-29 111
MS.gene26812.t1 MTR_2g064160 47.573 103 42 2 24 114 11 113 6.31e-29 111
MS.gene26812.t1 MTR_2g034790 50.000 106 41 2 21 114 9 114 7.69e-29 111
MS.gene26812.t1 MTR_3g065440 45.217 115 51 2 20 122 8 122 7.97e-29 111
MS.gene26812.t1 MTR_4g102380 46.729 107 45 2 20 114 8 114 1.16e-28 109
MS.gene26812.t1 MTR_2g089450 51.456 103 38 2 24 114 12 114 1.18e-28 109
MS.gene26812.t1 MTR_0251s0050 48.598 107 43 2 24 118 13 119 1.27e-28 109
MS.gene26812.t1 MTR_2g089420 47.107 121 51 3 24 131 11 131 1.55e-28 112
MS.gene26812.t1 MTR_1g085640 47.748 111 46 2 24 122 12 122 1.66e-28 111
MS.gene26812.t1 MTR_0008s0280 47.619 105 43 2 25 117 13 117 1.70e-28 108
MS.gene26812.t1 MTR_1g100667 44.800 125 55 4 18 129 7 130 2.19e-28 109
MS.gene26812.t1 MTR_7g111290 49.138 116 47 2 24 127 12 127 2.47e-28 111
MS.gene26812.t1 MTR_0008s0390 49.524 105 41 2 24 116 13 117 3.19e-28 108
MS.gene26812.t1 MTR_3g028740 47.273 110 46 2 20 117 18 127 3.39e-28 110
MS.gene26812.t1 MTR_2g067420 50.000 100 38 2 24 111 14 113 3.68e-28 109
MS.gene26812.t1 MTR_7g010210 45.794 107 46 2 24 118 12 118 4.06e-28 109
MS.gene26812.t1 MTR_7g010210 45.794 107 46 2 24 118 12 118 4.76e-28 108
MS.gene26812.t1 MTR_0063s0090 37.888 161 74 5 24 170 12 160 6.40e-28 106
MS.gene26812.t1 MTR_4g057635 50.000 104 39 3 24 114 12 115 6.43e-28 108
MS.gene26812.t1 MTR_1g112760 50.000 108 41 3 24 118 13 120 6.76e-28 106
MS.gene26812.t1 MTR_7g087130 45.283 106 46 1 21 114 9 114 6.93e-28 109
MS.gene26812.t1 MTR_3g077110 45.600 125 55 3 24 135 12 136 8.66e-28 109
MS.gene26812.t1 MTR_0008s0470 48.571 105 42 2 24 116 13 117 1.05e-27 107
MS.gene26812.t1 MTR_6g009430 43.478 115 53 2 20 122 8 122 1.08e-27 108
MS.gene26812.t1 MTR_3g039990 43.243 111 51 2 21 119 10 120 1.17e-27 108
MS.gene26812.t1 MTR_0140s0030 44.340 106 47 2 21 114 10 115 3.95e-27 107
MS.gene26812.t1 MTR_0489s0020 44.340 106 47 2 21 114 10 115 3.95e-27 107
MS.gene26812.t1 MTR_3g103570 48.148 108 43 3 20 114 8 115 5.57e-27 107
MS.gene26812.t1 MTR_4g105130 49.074 108 42 3 24 118 12 119 6.74e-27 107
MS.gene26812.t1 MTR_8g017340 47.115 104 42 3 24 114 12 115 1.17e-26 107
MS.gene26812.t1 MTR_8g017350 47.115 104 42 3 24 114 12 115 1.48e-26 108
MS.gene26812.t1 MTR_5g014990 46.552 116 47 4 20 120 8 123 1.72e-26 105
MS.gene26812.t1 MTR_1g017140 46.552 116 47 4 20 120 8 123 2.00e-26 105
MS.gene26812.t1 MTR_6g012180 47.475 99 40 2 24 110 12 110 2.04e-26 104
MS.gene26812.t1 MTR_5g042030 40.833 120 59 1 22 129 5 124 2.07e-26 104
MS.gene26812.t1 MTR_3g461490 43.089 123 57 3 23 132 11 133 2.08e-26 105
MS.gene26812.t1 MTR_8g017390 46.296 108 45 3 20 114 8 115 7.60e-26 105
MS.gene26812.t1 MTR_2g095520 47.115 104 42 3 20 110 8 111 1.40e-25 102
MS.gene26812.t1 MTR_7g102110 44.444 108 47 3 20 114 8 115 1.70e-25 101
MS.gene26812.t1 MTR_6g055910 47.059 102 42 2 25 114 15 116 1.73e-25 101
MS.gene26812.t1 MTR_4g128670 49.038 104 40 3 20 110 8 111 1.97e-25 102
MS.gene26812.t1 MTR_1g083630 45.370 108 47 2 22 117 10 117 2.37e-25 104
MS.gene26812.t1 MTR_2g088170 47.573 103 42 2 24 114 29 131 9.95e-25 102
MS.gene26812.t1 MTR_4g097570 48.039 102 40 3 20 108 8 109 1.57e-24 99.4
MS.gene26812.t1 MTR_0197s0010 29.911 224 136 6 29 240 6 220 1.65e-24 97.8
MS.gene26812.t1 MTR_5g088640 40.741 108 51 1 23 117 11 118 2.70e-24 98.2
MS.gene26812.t1 MTR_5g088080 40.741 108 51 1 23 117 11 118 2.76e-24 98.2
MS.gene26812.t1 MTR_5g088150 40.741 108 51 1 23 117 11 118 2.76e-24 98.2
MS.gene26812.t1 MTR_5g488210 40.741 108 51 1 23 117 11 118 2.76e-24 98.2
MS.gene26812.t1 MTR_6g090405 47.115 104 42 3 24 114 12 115 3.28e-24 97.8
MS.gene26812.t1 MTR_5g488170 40.741 108 51 1 23 117 11 118 4.13e-24 97.1
MS.gene26812.t1 MTR_5g079120 37.931 145 75 4 19 148 56 200 4.29e-24 98.6
MS.gene26812.t1 MTR_5g007300 53.333 75 35 0 24 98 64 138 6.45e-24 94.0
MS.gene26812.t1 MTR_8g060940 47.170 106 44 2 19 112 2 107 1.43e-23 95.9
MS.gene26812.t1 MTR_7g109320 48.113 106 43 2 21 114 9 114 1.87e-23 97.4
MS.gene26812.t1 MTR_5g062790 37.391 115 59 1 17 118 2 116 3.81e-23 95.9
MS.gene26812.t1 MTR_4g097570 47.573 103 40 4 20 108 8 110 5.68e-23 95.1
MS.gene26812.t1 MTR_5g078910 42.593 108 50 2 19 114 2 109 3.01e-22 93.2
MS.gene26812.t1 MTR_0247s0040 44.340 106 47 2 20 113 3 108 5.46e-22 90.1
MS.gene26812.t1 MTR_5g079290 42.373 118 54 3 9 114 4 119 6.59e-22 91.7
MS.gene26812.t1 MTR_4g063100 53.247 77 24 1 56 120 10 86 7.23e-22 90.9
MS.gene26812.t1 MTR_7g017260 40.157 127 54 4 2 114 11 129 1.02e-21 91.3
MS.gene26812.t1 MTR_0193s0090 42.991 107 49 2 20 114 3 109 1.08e-21 89.7
MS.gene26812.t1 MTR_5g078800 43.519 108 49 2 19 114 2 109 2.08e-21 90.5
MS.gene26812.t1 MTR_0001s0360 32.143 168 102 2 24 179 7 174 3.06e-21 89.7
MS.gene26812.t1 MTR_5g078950 42.991 107 49 2 19 113 2 108 4.78e-21 89.4
MS.gene26812.t1 MTR_5g079220 43.689 103 46 2 24 114 21 123 6.02e-21 89.4
MS.gene26812.t1 MTR_8g006470 32.075 159 73 3 15 160 1 137 7.97e-21 89.4
MS.gene26812.t1 MTR_5g078930 43.925 107 48 2 19 113 4 110 1.52e-20 87.0
MS.gene26812.t1 MTR_2g096380 53.247 77 24 1 56 120 19 95 2.16e-20 86.7
MS.gene26812.t1 MTR_5g078860 42.593 108 50 2 19 114 2 109 3.89e-20 87.8
MS.gene26812.t1 MTR_4g029540 34.579 107 57 2 24 117 10 116 5.37e-20 87.0
MS.gene26812.t1 MTR_5g088610 35.088 114 61 1 17 117 2 115 1.88e-19 86.3
MS.gene26812.t1 MTR_5g016510 36.283 113 59 2 22 122 1 112 3.23e-17 79.7
MS.gene26812.t1 MTR_7g061330 38.462 104 51 3 23 114 110 212 3.31e-17 80.9
MS.gene26812.t1 MTR_7g461410 38.462 104 51 3 23 114 110 212 3.31e-17 80.9
MS.gene26812.t1 MTR_7g061330 38.462 104 51 3 23 114 74 176 5.75e-17 80.1
MS.gene26812.t1 MTR_4g128190 33.103 145 57 4 14 131 1 132 9.64e-17 77.4
MS.gene26812.t1 MTR_7g111290 50.000 84 30 2 56 127 2 85 1.01e-16 78.6
MS.gene26812.t1 MTR_6g027340 36.937 111 57 3 29 127 19 128 1.23e-16 76.3
MS.gene26812.t1 MTR_3g045430 34.921 126 68 4 16 128 6 130 1.27e-16 77.8
MS.gene26812.t1 MTR_3g110028 37.500 104 52 3 23 114 82 184 3.63e-16 78.2
MS.gene26812.t1 MTR_1g085880 37.391 115 58 2 14 114 1 115 6.83e-16 73.9
MS.gene26812.t1 MTR_6g015455 40.404 99 46 2 22 108 1 98 7.68e-16 77.0
MS.gene26812.t1 MTR_6g055910 50.000 70 23 2 57 114 18 87 1.60e-15 74.3
MS.gene26812.t1 MTR_6g027360 35.345 116 62 3 24 127 76 190 2.25e-15 74.3
MS.gene26812.t1 MTR_1g085770 37.391 115 58 2 14 114 1 115 2.64e-15 74.3
MS.gene26812.t1 MTR_4g019370 37.624 101 50 3 26 114 38 137 4.00e-15 74.3
MS.gene26812.t1 MTR_1g026870 35.577 104 54 3 23 114 82 184 9.57e-15 73.9
MS.gene26812.t1 MTR_5g070020 31.469 143 84 4 2 131 97 238 1.25e-14 72.8
MS.gene26812.t1 MTR_5g049190 34.653 101 53 3 20 108 13 112 1.46e-14 71.2
MS.gene26812.t1 MTR_4g094982 36.190 105 54 2 22 114 1 104 1.78e-14 71.6
MS.gene26812.t1 MTR_3g101290 34.545 110 59 3 19 116 30 138 3.93e-14 69.7
MS.gene26812.t1 MTR_3g463400 37.113 97 48 3 24 108 131 226 5.77e-14 71.2
MS.gene26812.t1 MTR_4g088015 32.000 125 72 3 23 135 218 341 6.61e-14 70.9
MS.gene26812.t1 MTR_6g074860 36.792 106 52 4 26 118 4 107 1.04e-13 68.9
MS.gene26812.t1 MTR_7g450950 35.514 107 56 3 26 120 157 262 1.26e-13 69.7
MS.gene26812.t1 MTR_3g077650 35.644 101 50 4 21 108 176 274 1.26e-13 70.1
MS.gene26812.t1 MTR_7g037260 26.389 216 132 7 18 216 137 342 1.73e-13 69.3
MS.gene26812.t1 MTR_4g105660 34.513 113 55 4 24 121 178 286 2.18e-13 69.3
MS.gene26812.t1 MTR_1g057980 33.333 126 69 3 2 115 58 180 2.71e-13 68.6
MS.gene26812.t1 MTR_0023s0210 39.474 76 46 0 19 94 2 77 5.34e-13 63.2
MS.gene26812.t1 MTR_5g082910 38.776 98 47 3 23 108 16 112 8.99e-13 67.0
MS.gene26812.t1 MTR_5g041570 38.144 97 47 3 26 110 134 229 1.10e-12 67.4
MS.gene26812.t1 MTR_6g027370 33.333 114 63 3 26 127 99 211 2.76e-12 65.9
MS.gene26812.t1 MTR_7g035350 36.364 99 50 3 29 115 228 325 3.38e-12 65.9
MS.gene26812.t1 MTR_7g451170 35.714 112 54 5 10 108 178 284 4.93e-12 65.5
MS.gene26812.t1 MTR_4g082040 37.113 97 48 3 26 110 105 200 6.05e-12 65.1
MS.gene26812.t1 MTR_3g089045 31.008 129 76 3 16 132 6 133 1.52e-11 63.5
MS.gene26812.t1 MTR_5g010650 35.714 98 50 3 23 108 107 203 2.34e-11 63.5
MS.gene26812.t1 MTR_7g061550 30.909 110 62 3 29 124 10 119 2.60e-11 63.2
MS.gene26812.t1 MTR_7g037130 28.889 135 83 3 13 135 132 265 7.77e-11 61.6
MS.gene26812.t1 MTR_5g038910 33.621 116 64 3 14 117 14 128 8.75e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene26812.t1 AT5G49620 68.927 177 41 2 1 163 1 177 4.45e-70 218
MS.gene26812.t1 AT5G49620 63.874 191 41 2 1 163 1 191 6.44e-68 213
MS.gene26812.t1 AT3G06490 74.194 155 23 2 1 143 1 150 9.54e-68 212
MS.gene26812.t1 AT1G48000 67.857 140 33 1 22 149 30 169 1.13e-67 209
MS.gene26812.t1 AT2G47190 45.560 259 111 8 17 249 13 267 1.13e-63 200
MS.gene26812.t1 AT1G68320 62.937 143 38 2 23 150 18 160 3.86e-58 186
MS.gene26812.t1 AT1G25340 46.190 210 87 3 19 209 13 215 1.23e-55 180
MS.gene26812.t1 AT3G27810 69.091 110 22 1 21 118 17 126 2.27e-51 167
MS.gene26812.t1 AT1G25340 44.286 210 86 4 19 209 13 210 3.67e-50 166
MS.gene26812.t1 AT1G25340 44.286 210 86 4 19 209 13 210 6.31e-50 166
MS.gene26812.t1 AT5G40350 68.868 106 21 1 21 114 14 119 5.97e-49 160
MS.gene26812.t1 AT3G01530 59.690 129 37 3 1 117 5 130 1.78e-47 156
MS.gene26812.t1 AT4G13480 59.048 105 31 1 25 117 7 111 4.95e-39 136
MS.gene26812.t1 AT3G24310 57.798 109 34 1 21 117 15 123 7.02e-39 136
MS.gene26812.t1 AT3G30210 49.194 124 51 1 3 114 6 129 1.69e-38 135
MS.gene26812.t1 AT3G13540 56.604 106 34 2 21 114 20 125 1.69e-34 124
MS.gene26812.t1 AT3G02940 51.304 115 44 2 20 122 8 122 1.94e-34 125
MS.gene26812.t1 AT3G02940 51.304 115 44 2 20 122 8 122 2.82e-34 125
MS.gene26812.t1 AT3G02940 51.304 115 44 2 20 122 8 122 2.82e-34 125
MS.gene26812.t1 AT5G54230 51.351 111 42 2 24 122 12 122 2.85e-34 125
MS.gene26812.t1 AT3G46130 50.000 112 44 1 25 124 10 121 7.61e-34 123
MS.gene26812.t1 AT5G59780 50.000 110 43 1 23 120 7 116 8.97e-34 122
MS.gene26812.t1 AT4G05100 49.138 116 47 2 19 122 8 123 2.07e-33 123
MS.gene26812.t1 AT5G16770 46.324 136 59 4 20 141 8 143 2.68e-33 123
MS.gene26812.t1 AT5G16770 46.324 136 59 4 20 141 8 143 2.68e-33 123
MS.gene26812.t1 AT5G16770 46.324 136 59 4 20 141 8 143 3.35e-33 123
MS.gene26812.t1 AT5G16770 46.324 136 59 4 20 141 8 143 3.35e-33 123
MS.gene26812.t1 AT5G40330 50.893 112 43 2 15 114 3 114 3.82e-33 120
MS.gene26812.t1 AT5G14750 50.450 111 43 2 16 114 8 118 4.12e-33 119
MS.gene26812.t1 AT4G34990 57.426 101 31 2 26 114 14 114 6.25e-33 121
MS.gene26812.t1 AT4G21440 49.550 111 44 2 24 122 12 122 9.20e-33 122
MS.gene26812.t1 AT4G28110 51.456 103 38 2 24 114 12 114 1.08e-32 120
MS.gene26812.t1 AT5G35550 56.731 104 33 2 23 114 13 116 1.47e-32 119
MS.gene26812.t1 AT5G60890 45.865 133 59 3 21 140 9 141 1.51e-32 120
MS.gene26812.t1 AT1G34670 44.776 134 61 3 20 141 8 140 1.83e-32 122
MS.gene26812.t1 AT1G06180 40.909 176 80 5 21 184 9 172 2.00e-32 119
MS.gene26812.t1 AT5G15310 45.528 123 55 2 20 130 8 130 3.95e-32 118
MS.gene26812.t1 AT3G01140 45.528 123 55 2 20 130 8 130 4.70e-32 120
MS.gene26812.t1 AT5G15310 45.528 123 55 2 20 130 8 130 4.88e-32 120
MS.gene26812.t1 AT5G15310 45.528 123 55 2 20 130 8 130 5.82e-32 119
MS.gene26812.t1 AT1G22640 50.435 115 45 2 26 128 14 128 6.80e-32 118
MS.gene26812.t1 AT5G65230 46.774 124 54 2 16 127 4 127 7.61e-32 119
MS.gene26812.t1 AT5G07690 50.962 104 39 1 24 115 12 115 8.21e-32 119
MS.gene26812.t1 AT3G01140 44.186 129 60 2 14 130 45 173 8.69e-32 120
MS.gene26812.t1 AT1G18570 52.830 106 38 2 21 114 10 115 1.07e-31 119
MS.gene26812.t1 AT3G23250 51.887 106 39 2 21 114 9 114 1.16e-31 118
MS.gene26812.t1 AT3G62610 52.830 106 38 2 21 114 9 114 1.17e-31 119
MS.gene26812.t1 AT2G31180 51.786 112 41 3 21 119 9 120 1.35e-31 117
MS.gene26812.t1 AT4G38620 54.455 101 34 2 26 114 14 114 2.48e-31 117
MS.gene26812.t1 AT2G47460 52.830 106 38 2 21 114 9 114 2.99e-31 119
MS.gene26812.t1 AT5G10280 49.550 111 44 2 24 122 12 122 3.04e-31 118
MS.gene26812.t1 AT3G27810 71.622 74 9 1 57 118 4 77 3.36e-31 114
MS.gene26812.t1 AT4G26930 48.305 118 46 3 16 118 8 125 4.02e-31 119
MS.gene26812.t1 AT1G57560 53.398 103 36 2 24 114 12 114 5.16e-31 116
MS.gene26812.t1 AT1G57560 53.398 103 36 2 24 114 12 114 5.42e-31 117
MS.gene26812.t1 AT4G12350 35.882 170 95 3 24 181 12 179 5.81e-31 116
MS.gene26812.t1 AT2G16720 53.465 101 35 2 26 114 14 114 5.96e-31 115
MS.gene26812.t1 AT1G09540 48.276 116 48 2 24 127 12 127 7.85e-31 117
MS.gene26812.t1 AT4G09460 53.465 101 35 2 26 114 14 114 8.79e-31 114
MS.gene26812.t1 AT5G14340 49.565 115 46 2 20 122 20 134 1.04e-30 115
MS.gene26812.t1 AT1G63910 49.550 111 44 2 20 118 8 118 1.07e-30 117
MS.gene26812.t1 AT3G13890 47.664 107 44 2 20 114 8 114 1.18e-30 117
MS.gene26812.t1 AT1G16490 51.456 103 38 2 24 114 14 116 1.40e-30 115
MS.gene26812.t1 AT5G07700 49.515 103 40 1 24 114 12 114 1.73e-30 116
MS.gene26812.t1 AT5G07700 49.515 103 40 1 24 114 12 114 1.73e-30 116
MS.gene26812.t1 AT1G35515 51.456 103 38 2 24 114 12 114 2.10e-30 112
MS.gene26812.t1 AT3G27920 47.500 120 48 3 18 125 8 124 2.56e-30 113
MS.gene26812.t1 AT5G52600 48.624 109 44 2 18 114 6 114 3.10e-30 112
MS.gene26812.t1 AT3G53200 51.887 106 39 1 21 114 6 111 3.22e-30 113
MS.gene26812.t1 AT5G61420 49.515 103 40 1 24 114 12 114 3.62e-30 115
MS.gene26812.t1 AT4G22680 44.167 120 55 2 20 127 8 127 3.80e-30 113
MS.gene26812.t1 AT3G61250 49.533 107 42 2 20 114 8 114 5.84e-30 114
MS.gene26812.t1 AT5G26660 51.456 103 38 2 24 114 12 114 6.77e-30 114
MS.gene26812.t1 AT5G49330 51.887 106 39 2 21 114 9 114 7.51e-30 114
MS.gene26812.t1 AT2G26960 44.715 123 50 3 7 117 9 125 1.03e-29 115
MS.gene26812.t1 AT3G11440 48.544 103 41 2 24 114 41 143 1.76e-29 115
MS.gene26812.t1 AT5G55020 48.598 107 43 2 24 118 26 132 2.01e-29 115
MS.gene26812.t1 AT3G47600 44.444 117 51 3 20 122 8 124 2.31e-29 113
MS.gene26812.t1 AT1G74080 50.485 103 39 1 24 114 12 114 2.73e-29 112
MS.gene26812.t1 AT2G32460 47.573 103 42 1 24 114 6 108 3.68e-29 114
MS.gene26812.t1 AT2G32460 47.573 103 42 1 24 114 18 120 3.71e-29 114
MS.gene26812.t1 AT1G56160 50.485 103 39 2 24 114 14 116 5.22e-29 111
MS.gene26812.t1 AT3G11440 48.544 103 41 2 24 114 41 143 5.30e-29 114
MS.gene26812.t1 AT3G11440 48.544 103 41 2 24 114 41 143 5.30e-29 114
MS.gene26812.t1 AT3G11440 48.544 103 41 2 24 114 41 143 5.30e-29 114
MS.gene26812.t1 AT3G08500 45.161 124 56 2 6 117 12 135 6.32e-29 112
MS.gene26812.t1 AT4G37780 47.863 117 46 4 20 121 8 124 7.25e-29 111
MS.gene26812.t1 AT5G06100 49.515 103 40 2 24 114 32 134 8.11e-29 113
MS.gene26812.t1 AT1G79180 47.664 107 44 2 24 118 14 120 8.74e-29 110
MS.gene26812.t1 AT5G40350 71.429 70 8 1 57 114 5 74 1.32e-28 107
MS.gene26812.t1 AT5G06100 49.515 103 40 2 24 114 32 134 1.83e-28 113
MS.gene26812.t1 AT5G06100 49.515 103 40 2 24 114 32 134 1.83e-28 113
MS.gene26812.t1 AT5G06100 49.515 103 40 2 24 114 32 134 1.83e-28 113
MS.gene26812.t1 AT5G06100 49.515 103 40 2 24 114 32 134 1.83e-28 113
MS.gene26812.t1 AT5G12870 42.373 118 56 2 14 119 8 125 2.10e-28 109
MS.gene26812.t1 AT3G12720 46.602 103 43 2 24 114 22 124 3.00e-28 109
MS.gene26812.t1 AT5G16600 44.348 115 52 2 20 122 8 122 4.09e-28 109
MS.gene26812.t1 AT5G62470 44.144 111 50 2 21 119 9 119 4.34e-28 110
MS.gene26812.t1 AT1G66230 43.478 115 53 2 20 122 8 122 6.62e-28 108
MS.gene26812.t1 AT3G13890 43.966 116 44 3 20 114 8 123 1.10e-27 109
MS.gene26812.t1 AT1G74650 45.283 106 46 2 21 114 9 114 1.15e-27 108
MS.gene26812.t1 AT4G01680 49.515 103 40 2 24 114 12 114 1.88e-27 105
MS.gene26812.t1 AT4G01680 49.515 103 40 2 24 114 12 114 3.20e-27 107
MS.gene26812.t1 AT1G08810 41.176 119 58 1 20 126 8 126 3.25e-27 106
MS.gene26812.t1 AT4G17785 47.748 111 46 2 24 122 13 123 4.49e-27 107
MS.gene26812.t1 AT4G17785 47.748 111 46 2 24 122 13 123 4.51e-27 107
MS.gene26812.t1 AT3G28910 46.602 103 43 2 24 114 12 114 1.36e-26 105
MS.gene26812.t1 AT1G74430 49.074 108 42 3 24 118 12 119 1.69e-26 104
MS.gene26812.t1 AT2G36890 48.148 108 43 3 20 114 8 115 1.85e-26 104
MS.gene26812.t1 AT5G57620 46.296 108 45 3 20 114 8 115 1.89e-26 105
MS.gene26812.t1 AT5G62320 42.520 127 54 3 20 127 9 135 2.00e-26 103
MS.gene26812.t1 AT5G56110 43.089 123 57 3 23 132 11 133 2.19e-26 104
MS.gene26812.t1 AT2G36890 48.148 108 43 3 20 114 49 156 2.76e-26 105
MS.gene26812.t1 AT5G62470 44.144 111 49 3 21 119 9 118 3.76e-26 104
MS.gene26812.t1 AT3G49690 46.296 108 45 3 20 114 8 115 5.65e-26 103
MS.gene26812.t1 AT3G28470 45.000 100 43 2 23 110 11 110 9.19e-26 103
MS.gene26812.t1 AT5G23000 47.115 104 42 3 24 114 12 115 2.91e-25 102
MS.gene26812.t1 AT3G48920 42.017 119 54 3 8 114 5 120 3.24e-25 100
MS.gene26812.t1 AT5G65790 45.690 116 48 4 20 120 8 123 5.05e-25 102
MS.gene26812.t1 AT4G25560 46.078 102 43 2 25 114 11 112 6.62e-25 100
MS.gene26812.t1 AT3G12820 47.573 103 42 2 24 114 14 116 1.00e-24 98.6
MS.gene26812.t1 AT1G18710 46.602 103 43 2 24 114 12 114 2.18e-24 98.6
MS.gene26812.t1 AT4G01680 44.348 115 40 3 24 114 12 126 7.69e-24 98.6
MS.gene26812.t1 AT5G52260 45.045 111 49 2 16 114 4 114 7.94e-24 97.1
MS.gene26812.t1 AT1G66370 42.609 115 54 2 19 121 3 117 1.04e-23 96.3
MS.gene26812.t1 AT3G46130 51.163 86 30 1 51 124 4 89 2.08e-22 92.4
MS.gene26812.t1 AT1G79180 36.429 140 44 3 24 118 14 153 2.26e-22 94.4
MS.gene26812.t1 AT3G60460 35.652 115 61 2 18 119 5 119 4.42e-22 92.8
MS.gene26812.t1 AT3G46130 53.750 80 25 1 57 124 20 99 9.32e-22 90.9
MS.gene26812.t1 AT5G59780 55.263 76 22 1 57 120 20 95 1.14e-21 90.1
MS.gene26812.t1 AT1G66380 43.119 109 50 2 18 114 2 110 8.67e-21 85.9
MS.gene26812.t1 AT1G56650 44.660 103 45 2 24 114 8 110 6.84e-20 85.9
MS.gene26812.t1 AT1G66390 44.660 103 45 2 24 114 8 110 4.49e-19 84.0
MS.gene26812.t1 AT3G53200 54.286 70 20 1 57 114 9 78 1.31e-18 81.6
MS.gene26812.t1 AT5G35550 53.947 76 23 2 51 114 44 119 3.72e-18 81.6
MS.gene26812.t1 AT5G26660 50.000 78 27 2 57 122 14 91 5.90e-18 82.0
MS.gene26812.t1 AT5G11050 36.441 118 62 3 3 108 82 198 8.56e-18 82.4
MS.gene26812.t1 AT2G26950 33.613 119 64 3 9 115 4 119 1.06e-17 81.6
MS.gene26812.t1 AT1G66380 47.826 69 36 0 18 86 2 70 2.11e-17 75.9
MS.gene26812.t1 AT2G23290 37.168 113 58 2 14 114 1 112 8.49e-17 78.6
MS.gene26812.t1 AT3G47600 48.750 80 27 3 57 122 39 118 4.52e-16 76.6
MS.gene26812.t1 AT3G09370 36.538 104 53 3 23 114 132 234 6.30e-16 77.0
MS.gene26812.t1 AT5G14750 53.731 67 19 2 60 114 18 84 6.52e-16 73.6
MS.gene26812.t1 AT3G09370 36.538 104 53 3 23 114 127 229 6.75e-16 77.0
MS.gene26812.t1 AT3G09370 36.538 104 53 3 23 114 140 242 7.46e-16 77.0
MS.gene26812.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.37e-16 77.0
MS.gene26812.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.67e-16 77.0
MS.gene26812.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.67e-16 77.0
MS.gene26812.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.67e-16 77.0
MS.gene26812.t1 AT5G11510 38.462 104 51 3 23 114 78 180 8.69e-16 77.0
MS.gene26812.t1 AT4G37260 35.043 117 58 3 22 126 9 119 2.37e-15 74.7
MS.gene26812.t1 AT3G12820 53.731 67 19 2 60 114 2 68 3.46e-15 72.0
MS.gene26812.t1 AT5G02320 35.577 104 54 3 23 114 124 226 5.15e-15 74.3
MS.gene26812.t1 AT5G02320 35.577 104 54 3 23 114 124 226 5.15e-15 74.3
MS.gene26812.t1 AT5G58850 37.755 98 48 3 23 108 102 198 9.04e-15 73.6
MS.gene26812.t1 AT5G02320 35.577 104 54 3 23 114 64 166 1.01e-14 73.6
MS.gene26812.t1 AT4G32730 34.615 104 55 3 23 114 84 186 1.05e-14 73.9
MS.gene26812.t1 AT4G32730 34.615 104 55 3 23 114 84 186 1.05e-14 73.9
MS.gene26812.t1 AT4G32730 34.615 104 55 3 23 114 84 186 1.05e-14 73.9
MS.gene26812.t1 AT4G32730 34.615 104 55 3 23 114 84 186 1.05e-14 73.9
MS.gene26812.t1 AT4G32730 34.615 104 55 3 23 114 84 186 1.06e-14 73.6
MS.gene26812.t1 AT3G29020 37.143 105 53 3 26 118 65 168 1.21e-14 71.2
MS.gene26812.t1 AT3G29020 37.143 105 53 3 26 118 67 170 1.45e-14 72.4
MS.gene26812.t1 AT4G18770 33.636 110 60 3 24 121 215 323 1.72e-14 72.8
MS.gene26812.t1 AT3G27785 37.895 95 46 3 26 108 189 282 2.85e-14 72.0
MS.gene26812.t1 AT5G17800 36.937 111 51 3 26 118 93 202 1.38e-13 69.7
MS.gene26812.t1 AT3G55730 35.644 101 52 3 26 114 56 155 1.62e-13 69.7
MS.gene26812.t1 AT5G39700 33.088 136 75 4 5 125 33 167 1.66e-13 67.4
MS.gene26812.t1 AT1G69560 33.884 121 64 4 24 132 105 221 2.07e-13 69.3
MS.gene26812.t1 AT1G69560 33.884 121 64 4 24 132 121 237 2.28e-13 68.9
MS.gene26812.t1 AT1G26780 37.374 99 49 3 24 110 96 193 5.86e-13 68.2
MS.gene26812.t1 AT5G67300 33.654 104 56 2 23 114 3 105 6.23e-13 67.4
MS.gene26812.t1 AT1G26780 37.374 99 49 3 24 110 96 193 9.79e-13 66.6
MS.gene26812.t1 AT2G39880 28.723 188 113 8 26 198 50 231 1.50e-12 67.0
MS.gene26812.t1 AT1G17950 36.190 105 54 3 26 118 5 108 2.33e-12 65.5
MS.gene26812.t1 AT2G25230 35.849 106 52 4 23 113 23 127 3.11e-12 64.7
MS.gene26812.t1 AT3G09230 36.538 104 53 3 23 114 52 154 3.44e-12 65.9
MS.gene26812.t1 AT3G50060 33.654 104 56 3 23 114 3 105 3.54e-12 65.5
MS.gene26812.t1 AT1G73410 37.963 108 48 4 26 118 6 109 4.46e-12 64.3
MS.gene26812.t1 AT1G73410 37.143 105 53 3 26 118 6 109 1.12e-11 62.8
MS.gene26812.t1 AT5G40360 27.869 122 75 3 6 115 138 258 2.85e-11 63.2
MS.gene26812.t1 AT4G33450 30.345 145 82 4 6 138 5 142 3.13e-11 62.0
MS.gene26812.t1 AT1G22640 45.070 71 27 2 70 128 1 71 8.85e-11 60.1

Find 59 sgRNAs with CRISPR-Local

Find 129 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGATTCATTTGAGAATA+AGG 0.220030 8.2:+10670495 MS.gene26812:CDS
GGTGTCAACATTATCGGATT+TGG 0.250594 8.2:+10670516 MS.gene26812:CDS
CTTTGCATCCACGTGTTGTT+TGG 0.278668 8.2:-10670697 None:intergenic
CCTTAATCTGCAACTCTTAC+CGG 0.284466 8.2:-10669616 None:intergenic
TAATAATTTGAATTAGCATT+AGG 0.308302 8.2:-10670583 None:intergenic
GGAGAATCAATGGATGTAAA+AGG 0.315475 8.2:+10668902 None:intergenic
AATAATTTGAATTAGCATTA+GGG 0.316977 8.2:-10670582 None:intergenic
TTCTCATCAACTTAGCTTCT+CGG 0.318392 8.2:+10670612 MS.gene26812:CDS
ACCGGTTACCCCAACGAGTA+TGG 0.324396 8.2:-10669713 None:intergenic
CCACGTGTTGTTTGGCTCCA+TGG 0.354528 8.2:-10670689 None:intergenic
GTGTCAACATTATCGGATTT+GGG 0.369512 8.2:+10670517 MS.gene26812:CDS
CACGTCGCATTTGAGTTGTT+TGG 0.369835 8.2:-10670233 None:intergenic
GAATAAGGTGTCAACATTAT+CGG 0.381527 8.2:+10670510 MS.gene26812:CDS
TCTCGAGCTCCATACTCGTT+GGG 0.385217 8.2:+10669704 MS.gene26812:CDS
AGGACACCATGCGCTACCTT+TGG 0.391149 8.2:+10670272 MS.gene26812:CDS
CATTCTCTTCACTACTCATA+AGG 0.400918 8.2:-10668949 None:intergenic
CGGTCCAAGGACCTCTTCTA+AGG 0.411951 8.2:-10668979 None:intergenic
GATTGTATCACAAGCCCGTC+TGG 0.440427 8.2:+10670634 MS.gene26812:CDS
CGTGAATAGCAAGCAATTCA+AGG 0.449225 8.2:+10670252 MS.gene26812:CDS
ATGTTTCCACGTCTAACATC+GGG 0.453593 8.2:-10669657 None:intergenic
TTCTCGAGCTCCATACTCGT+TGG 0.464638 8.2:+10669703 MS.gene26812:CDS
ATTAATGGATTTCCAATCCA+TGG 0.471132 8.2:+10670672 MS.gene26812:CDS
AGGTCCTTGGACCGTGGATG+AGG 0.483198 8.2:+10668988 MS.gene26812:CDS
ATAATATTTACCAGCAGAGT+TGG 0.487488 8.2:-10669068 None:intergenic
CCGGTAAGAGTTGCAGATTA+AGG 0.490055 8.2:+10669616 MS.gene26812:CDS
TGTTGTTTGGCTCCATGGAT+TGG 0.498220 8.2:-10670684 None:intergenic
CTACTCATGGTGAAGGTCGT+TGG 0.502603 8.2:+10669035 MS.gene26812:CDS
TCAATGGATGTAAAAGGAAG+AGG 0.504187 8.2:+10668908 None:intergenic
AATACCCTCGCCAACTCTGC+TGG 0.506355 8.2:+10669058 MS.gene26812:CDS
AACAACACGTGGATGCAAAG+TGG 0.511089 8.2:+10670700 MS.gene26812:CDS
ATGAATTACATTGCTACTCA+TGG 0.522275 8.2:+10669022 MS.gene26812:CDS
ATATTAGGTCTCAAACGAAC+CGG 0.530231 8.2:+10669597 MS.gene26812:intron
CGACTAGCCTCGGCATCCAA+AGG 0.537317 8.2:-10670288 None:intergenic
GATGTTTCCACGTCTAACAT+CGG 0.539759 8.2:-10669658 None:intergenic
ACAACACGTGGATGCAAAGT+GGG 0.544322 8.2:+10670701 MS.gene26812:CDS
TGGACCTTAGAAGAGGTCCT+TGG 0.547752 8.2:+10668975 MS.gene26812:CDS
TGCGCTACCTTTGGATGCCG+AGG 0.557604 8.2:+10670281 MS.gene26812:CDS
AAGTCCTCATCCACGGTCCA+AGG 0.564665 8.2:-10668992 None:intergenic
ATTTACCAGCAGAGTTGGCG+AGG 0.570629 8.2:-10669063 None:intergenic
TACATTGCTACTCATGGTGA+AGG 0.576865 8.2:+10669028 MS.gene26812:CDS
GAGTAGTGAAGAGAATGAGA+TGG 0.579169 8.2:+10668955 MS.gene26812:CDS
TAGAAGAGGTCCTTGGACCG+TGG 0.586488 8.2:+10668982 MS.gene26812:CDS
TGAATACGTTCGACTAGCCT+CGG 0.590922 8.2:-10670298 None:intergenic
CGGCATCCAAAGGTAGCGCA+TGG 0.593311 8.2:-10670278 None:intergenic
CTCCGCCCCGATGTTAGACG+TGG 0.599725 8.2:+10669651 MS.gene26812:CDS
CTCGAGCTCCATACTCGTTG+GGG 0.606500 8.2:+10669705 MS.gene26812:CDS
GAGAAGCTAAGTTGATGAGA+AGG 0.613417 8.2:-10670610 None:intergenic
CTTGAGAAAACAATCCAGAC+GGG 0.614227 8.2:-10670648 None:intergenic
GAGTAGCAATGTAATTCATG+AGG 0.616394 8.2:-10669018 None:intergenic
CCATGGAGCCAAACAACACG+TGG 0.620461 8.2:+10670689 MS.gene26812:CDS
AATGAGATGGACCTTAGAAG+AGG 0.621660 8.2:+10668968 MS.gene26812:CDS
CCTTGAGAAAACAATCCAGA+CGG 0.624342 8.2:-10670649 None:intergenic
GTAAGAGTTGCAGATTAAGG+TGG 0.637890 8.2:+10669619 MS.gene26812:CDS
AGTAGCAATGTAATTCATGA+GGG 0.639227 8.2:-10669017 None:intergenic
GAGGGTTAAGTCCTCATCCA+CGG 0.648641 8.2:-10668999 None:intergenic
TTTACCAGCAGAGTTGGCGA+GGG 0.653027 8.2:-10669062 None:intergenic
CAACACGTGGATGCAAAGTG+GGG 0.667014 8.2:+10670702 MS.gene26812:CDS
TGTTTCCACGTCTAACATCG+GGG 0.724931 8.2:-10669656 None:intergenic
TTCCACGTCTAACATCGGGG+CGG 0.772697 8.2:-10669653 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATGAAATAAAAAATTAT+TGG + chr8.2:10670188-10670207 MS.gene26812:CDS 10.0%
!! CTACAATATAATATAAAATT+CGG + chr8.2:10669473-10669492 MS.gene26812:intron 10.0%
!! CTTAAAATTTATATTATTAC+CGG - chr8.2:10669734-10669753 None:intergenic 10.0%
!! TATATTTGTAAAATTTGAAT+TGG - chr8.2:10669847-10669866 None:intergenic 10.0%
!! AAAGATTATTTGTTTAATGA+TGG + chr8.2:10670117-10670136 MS.gene26812:intron 15.0%
!! AAATACTAATAGGATTTATA+CGG - chr8.2:10669517-10669536 None:intergenic 15.0%
!! AATAATTTGAATTAGCATTA+GGG - chr8.2:10670585-10670604 None:intergenic 15.0%
!! ATAATCTTTGTCAAAATTAA+TGG - chr8.2:10670106-10670125 None:intergenic 15.0%
!! ATCAATTAAAAATAAATGTC+TGG + chr8.2:10669952-10669971 MS.gene26812:intron 15.0%
!! GAAAAAAGGAAAAAATAAAA+TGG + chr8.2:10669393-10669412 MS.gene26812:intron 15.0%
!! TAATAATTTGAATTAGCATT+AGG - chr8.2:10670586-10670605 None:intergenic 15.0%
!! TCAATTAAAAATAAATGTCT+GGG + chr8.2:10669953-10669972 MS.gene26812:intron 15.0%
!!! AACATTAATCATATGATTTT+TGG - chr8.2:10669434-10669453 None:intergenic 15.0%
!!! TTTTAATTGATTTTTTTTGG+TGG - chr8.2:10669984-10670003 None:intergenic 15.0%
!! AATACCTCATACAATAATAA+CGG + chr8.2:10670364-10670383 MS.gene26812:intron 20.0%
!! AATACTAATAGGATTTATAC+GGG - chr8.2:10669516-10669535 None:intergenic 20.0%
!! AATTCATAGTTTATAGTTGT+TGG - chr8.2:10670412-10670431 None:intergenic 20.0%
!! ATATATATTGTGATATGCAT+TGG + chr8.2:10669256-10669275 MS.gene26812:intron 20.0%
!! GACAAAATACAAATACTAAT+AGG - chr8.2:10669527-10669546 None:intergenic 20.0%
!! GATTAGAAGAAGAAAATAAT+TGG - chr8.2:10670037-10670056 None:intergenic 20.0%
!! TAATGAAAAGAAGTGATAAA+AGG - chr8.2:10669157-10669176 None:intergenic 20.0%
!! TGAAATTTGTCAATATTCAT+TGG + chr8.2:10669343-10669362 MS.gene26812:intron 20.0%
!!! AAAGCTCATAAATACATTTT+TGG - chr8.2:10669774-10669793 None:intergenic 20.0%
!!! ATTAATCATATGATTTTTGG+TGG - chr8.2:10669431-10669450 None:intergenic 20.0%
!!! ATTTTTAATTGATTGATGCA+TGG - chr8.2:10669945-10669964 None:intergenic 20.0%
!!! TTGCATTCTTTTGTTATATT+AGG + chr8.2:10669582-10669601 MS.gene26812:intron 20.0%
! AAAATAGCTCAATATTTACC+AGG + chr8.2:10670157-10670176 MS.gene26812:intron 25.0%
! ATCAGATTCATTTGAGAATA+AGG + chr8.2:10670495-10670514 MS.gene26812:CDS 25.0%
! ATTCATTGGATATAATTGCT+TGG + chr8.2:10669357-10669376 MS.gene26812:intron 25.0%
! GTTATTATTGTATGAGGTAT+TGG - chr8.2:10670365-10670384 None:intergenic 25.0%
! TAGCTAGGTTTATAATAAGT+TGG + chr8.2:10669314-10669333 MS.gene26812:intron 25.0%
! TCCACATGTATCATATAATA+AGG - chr8.2:10669282-10669301 None:intergenic 25.0%
!! ATTGTTTTCTCAAGGATTAA+TGG + chr8.2:10670657-10670676 MS.gene26812:CDS 25.0%
!! GCTTTTCAATGGTAATTTAA+TGG - chr8.2:10669203-10669222 None:intergenic 25.0%
!! TCAATGGTAATTTAATGGAT+CGG - chr8.2:10669198-10669217 None:intergenic 25.0%
!!! ATTTTAAGAGTTTCATATGC+CGG + chr8.2:10669746-10669765 MS.gene26812:intron 25.0%
!!! CATAAATACATTTTTGGTTC+CGG - chr8.2:10669768-10669787 None:intergenic 25.0%
!!! TTTTTTCCTTTTTTCACAAG+TGG - chr8.2:10669388-10669407 None:intergenic 25.0%
ACTCTGCTGGTAAATATTAT+TGG + chr8.2:10669071-10669090 MS.gene26812:intron 30.0%
AGTAGCAATGTAATTCATGA+GGG - chr8.2:10669020-10669039 None:intergenic 30.0%
ATAATATTTACCAGCAGAGT+TGG - chr8.2:10669071-10669090 None:intergenic 30.0%
ATGAATTACATTGCTACTCA+TGG + chr8.2:10669022-10669041 MS.gene26812:CDS 30.0%
ATTGATGCATGGATAATGTT+CGG - chr8.2:10669934-10669953 None:intergenic 30.0%
GTATAACTTTGTGTCATATG+TGG - chr8.2:10670448-10670467 None:intergenic 30.0%
! CTTCTTTTCATTACCACAAA+TGG + chr8.2:10669164-10669183 MS.gene26812:intron 30.0%
! GAATAAGGTGTCAACATTAT+CGG + chr8.2:10670510-10670529 MS.gene26812:CDS 30.0%
! GCCTTATTATATGATACATG+TGG + chr8.2:10669278-10669297 MS.gene26812:intron 30.0%
! TTTTCATTACCACAAATGGA+TGG + chr8.2:10669168-10669187 MS.gene26812:intron 30.0%
!! ATTAATGGATTTCCAATCCA+TGG + chr8.2:10670672-10670691 MS.gene26812:CDS 30.0%
!!! AATCATATGATTTTTGGTGG+AGG - chr8.2:10669428-10669447 None:intergenic 30.0%
AGTCACAAAACCACAAACTT+TGG - chr8.2:10669225-10669244 None:intergenic 35.0%
ATATTAGGTCTCAAACGAAC+CGG + chr8.2:10669597-10669616 MS.gene26812:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG - chr8.2:10670178-10670197 None:intergenic 35.0%
CATTCTCTTCACTACTCATA+AGG - chr8.2:10668952-10668971 None:intergenic 35.0%
CATTGAAAAGCCAAAGTTTG+TGG + chr8.2:10669212-10669231 MS.gene26812:intron 35.0%
CTAATTCAGCTTCACGAAAT+TGG - chr8.2:10669823-10669842 None:intergenic 35.0%
GAGTAGCAATGTAATTCATG+AGG - chr8.2:10669021-10669040 None:intergenic 35.0%
GTGTCAACATTATCGGATTT+GGG + chr8.2:10670517-10670536 MS.gene26812:CDS 35.0%
TAATAACGGCAGCAAAATGA+CGG + chr8.2:10670378-10670397 MS.gene26812:intron 35.0%
TAGAGAGAAGAGGCTAATTT+AGG - chr8.2:10669100-10669119 None:intergenic 35.0%
TTCTCATCAACTTAGCTTCT+CGG + chr8.2:10670612-10670631 MS.gene26812:CDS 35.0%
!! TAATGATGGATTGCATCAGA+TGG + chr8.2:10670131-10670150 MS.gene26812:intron 35.0%
!!! CACAAACTTTGGCTTTTCAA+TGG - chr8.2:10669214-10669233 None:intergenic 35.0%
AATAACGGCAGCAAAATGAC+GGG + chr8.2:10670379-10670398 MS.gene26812:intron 40.0%
AATGAGATGGACCTTAGAAG+AGG + chr8.2:10668968-10668987 MS.gene26812:CDS 40.0%
ATCACATAGGTAGAGAGAAG+AGG - chr8.2:10669110-10669129 None:intergenic 40.0%
ATCGGATAACCATCCATTTG+TGG - chr8.2:10669180-10669199 None:intergenic 40.0%
ATGTTTCCACGTCTAACATC+GGG - chr8.2:10669660-10669679 None:intergenic 40.0%
CCTTAATCTGCAACTCTTAC+CGG - chr8.2:10669619-10669638 None:intergenic 40.0%
CCTTGAGAAAACAATCCAGA+CGG - chr8.2:10670652-10670671 None:intergenic 40.0%
CGTGAATAGCAAGCAATTCA+AGG + chr8.2:10670252-10670271 MS.gene26812:CDS 40.0%
CTTGAGAAAACAATCCAGAC+GGG - chr8.2:10670651-10670670 None:intergenic 40.0%
GAGTAGTGAAGAGAATGAGA+TGG + chr8.2:10668955-10668974 MS.gene26812:CDS 40.0%
GATGTTTCCACGTCTAACAT+CGG - chr8.2:10669661-10669680 None:intergenic 40.0%
GCTGCCGTTATTATTGTATG+AGG - chr8.2:10670371-10670390 None:intergenic 40.0%
GGATGTAATTGTCTCTAGCT+AGG + chr8.2:10669299-10669318 MS.gene26812:intron 40.0%
GGTGTCAACATTATCGGATT+TGG + chr8.2:10670516-10670535 MS.gene26812:CDS 40.0%
GTAAGAGTTGCAGATTAAGG+TGG + chr8.2:10669619-10669638 MS.gene26812:CDS 40.0%
TACATTGCTACTCATGGTGA+AGG + chr8.2:10669028-10669047 MS.gene26812:CDS 40.0%
TCTCTCTACCTATGTGATTG+TGG + chr8.2:10669112-10669131 MS.gene26812:intron 40.0%
! AGTTGTGTTGCTGTTCTCTA+GGG - chr8.2:10670470-10670489 None:intergenic 40.0%
!! ATTGTATGAGGTATTGGTCG+CGG - chr8.2:10670359-10670378 None:intergenic 40.0%
!! GAGAAGCTAAGTTGATGAGA+AGG - chr8.2:10670613-10670632 None:intergenic 40.0%
!!! GGGACTCATCTGACATTTTT+TGG + chr8.2:10670722-10670741 MS.gene26812:CDS 40.0%
AACAACACGTGGATGCAAAG+TGG + chr8.2:10670700-10670719 MS.gene26812:CDS 45.0%
ACAACACGTGGATGCAAAGT+GGG + chr8.2:10670701-10670720 MS.gene26812:CDS 45.0%
CCGGTAAGAGTTGCAGATTA+AGG + chr8.2:10669616-10669635 MS.gene26812:CDS 45.0%
TACGTGCACCACAATCACAT+AGG - chr8.2:10669123-10669142 None:intergenic 45.0%
TGTTTCCACGTCTAACATCG+GGG - chr8.2:10669659-10669678 None:intergenic 45.0%
! CAGTTGTGTTGCTGTTCTCT+AGG - chr8.2:10670471-10670490 None:intergenic 45.0%
! CCGTCTGGATTGTTTTCTCA+AGG + chr8.2:10670649-10670668 MS.gene26812:CDS 45.0%
! CTTTGCATCCACGTGTTGTT+TGG - chr8.2:10670700-10670719 None:intergenic 45.0%
! TGTTGTTTGGCTCCATGGAT+TGG - chr8.2:10670687-10670706 None:intergenic 45.0%
!! CACGTCGCATTTGAGTTGTT+TGG - chr8.2:10670236-10670255 None:intergenic 45.0%
!! TGAATACGTTCGACTAGCCT+CGG - chr8.2:10670301-10670320 None:intergenic 45.0%
!!! TATTTTTAATTGATTTTTTT+TGG - chr8.2:10669987-10670006 None:intergenic 5.0%
ATTTACCAGCAGAGTTGGCG+AGG - chr8.2:10669066-10669085 None:intergenic 50.0%
CAACACGTGGATGCAAAGTG+GGG + chr8.2:10670702-10670721 MS.gene26812:CDS 50.0%
CTACTCATGGTGAAGGTCGT+TGG + chr8.2:10669035-10669054 MS.gene26812:CDS 50.0%
GAGGGTTAAGTCCTCATCCA+CGG - chr8.2:10669002-10669021 None:intergenic 50.0%
GATTGTATCACAAGCCCGTC+TGG + chr8.2:10670634-10670653 MS.gene26812:CDS 50.0%
GCGCGACCACTTGTGAAAAA+AGG + chr8.2:10669379-10669398 MS.gene26812:intron 50.0%
TCCATACTCGTTGGGGTAAC+CGG + chr8.2:10669712-10669731 MS.gene26812:intron 50.0%
TCTCGAGCTCCATACTCGTT+GGG + chr8.2:10669704-10669723 MS.gene26812:CDS 50.0%
TGGACCTTAGAAGAGGTCCT+TGG + chr8.2:10668975-10668994 MS.gene26812:CDS 50.0%
TTCTCGAGCTCCATACTCGT+TGG + chr8.2:10669703-10669722 MS.gene26812:CDS 50.0%
TTTACCAGCAGAGTTGGCGA+GGG - chr8.2:10669065-10669084 None:intergenic 50.0%
AAGTCCTCATCCACGGTCCA+AGG - chr8.2:10668995-10669014 None:intergenic 55.0%
AATACCCTCGCCAACTCTGC+TGG + chr8.2:10669058-10669077 MS.gene26812:CDS 55.0%
ACCGGTTACCCCAACGAGTA+TGG - chr8.2:10669716-10669735 None:intergenic 55.0%
AGGACACCATGCGCTACCTT+TGG + chr8.2:10670272-10670291 MS.gene26812:CDS 55.0%
CCATGGAGCCAAACAACACG+TGG + chr8.2:10670689-10670708 MS.gene26812:CDS 55.0%
CGGTCCAAGGACCTCTTCTA+AGG - chr8.2:10668982-10669001 None:intergenic 55.0%
CTCGAGCTCCATACTCGTTG+GGG + chr8.2:10669705-10669724 MS.gene26812:CDS 55.0%
TAGAAGAGGTCCTTGGACCG+TGG + chr8.2:10668982-10669001 MS.gene26812:CDS 55.0%
TTCCACGTCTAACATCGGGG+CGG - chr8.2:10669656-10669675 None:intergenic 55.0%
!! CCACGTGTTGTTTGGCTCCA+TGG - chr8.2:10670692-10670711 None:intergenic 55.0%
!! GTATGAGGTATTGGTCGCGG+TGG - chr8.2:10670356-10670375 None:intergenic 55.0%
AGGTCCTTGGACCGTGGATG+AGG + chr8.2:10668988-10669007 MS.gene26812:CDS 60.0%
CGGCATCCAAAGGTAGCGCA+TGG - chr8.2:10670281-10670300 None:intergenic 60.0%
TGCGCTACCTTTGGATGCCG+AGG + chr8.2:10670281-10670300 MS.gene26812:CDS 60.0%
!! CGACTAGCCTCGGCATCCAA+AGG - chr8.2:10670291-10670310 None:intergenic 60.0%
ATTGGTCGCGGTGGCTGTGG+TGG - chr8.2:10670347-10670366 None:intergenic 65.0%
CTCCGCCCCGATGTTAGACG+TGG + chr8.2:10669651-10669670 MS.gene26812:CDS 65.0%
!! GGCTGTGGTGGTGGTGGTAG+TGG - chr8.2:10670335-10670354 None:intergenic 65.0%
!! GGTATTGGTCGCGGTGGCTG+TGG - chr8.2:10670350-10670369 None:intergenic 65.0%
!! GGTGGTGGTAGTGGCAGCAG+CGG - chr8.2:10670326-10670345 None:intergenic 65.0%
GGTCGCGGTGGCTGTGGTGG+TGG - chr8.2:10670344-10670363 None:intergenic 75.0%
!! CGCGGTGGCTGTGGTGGTGG+TGG - chr8.2:10670341-10670360 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.2 gene 10668911 10670798 10668911 ID=MS.gene26812
chr8.2 mRNA 10668911 10670798 10668911 ID=MS.gene26812.t1;Parent=MS.gene26812
chr8.2 exon 10668911 10669079 10668911 ID=MS.gene26812.t1.exon1;Parent=MS.gene26812.t1
chr8.2 CDS 10668911 10669079 10668911 ID=cds.MS.gene26812.t1;Parent=MS.gene26812.t1
chr8.2 exon 10669604 10669726 10669604 ID=MS.gene26812.t1.exon2;Parent=MS.gene26812.t1
chr8.2 CDS 10669604 10669726 10669604 ID=cds.MS.gene26812.t1;Parent=MS.gene26812.t1
chr8.2 exon 10670179 10670313 10670179 ID=MS.gene26812.t1.exon3;Parent=MS.gene26812.t1
chr8.2 CDS 10670179 10670313 10670179 ID=cds.MS.gene26812.t1;Parent=MS.gene26812.t1
chr8.2 exon 10670473 10670798 10670473 ID=MS.gene26812.t1.exon4;Parent=MS.gene26812.t1
chr8.2 CDS 10670473 10670798 10670473 ID=cds.MS.gene26812.t1;Parent=MS.gene26812.t1
Gene Sequence

>MS.gene26812

ATGGATGTAAAAGGAAGAGGAAGCGACAACAAAAACAACCTTATGAGTAGTGAAGAGAATGAGATGGACCTTAGAAGAGGTCCTTGGACCGTGGATGAGGACTTAACCCTCATGAATTACATTGCTACTCATGGTGAAGGTCGTTGGAATACCCTCGCCAACTCTGCTGGTAAATATTATTGGTTTCCTAAATTAGCCTCTTCTCTCTACCTATGTGATTGTGGTGCACGTACTTAATTAGTTCCTTTTATCACTTCTTTTCATTACCACAAATGGATGGTTATCCGATCCATTAAATTACCATTGAAAAGCCAAAGTTTGTGGTTTTGTGACTATAATAGTGAAATATATATTGTGATATGCATTGGCCTTATTATATGATACATGTGGATGTAATTGTCTCTAGCTAGGTTTATAATAAGTTGGCATATATGAAATTTGTCAATATTCATTGGATATAATTGCTTGGCGCGACCACTTGTGAAAAAAGGAAAAAATAAAATGGATTGATACACCTCCACCAAAAATCATATGATTAATGTTTCTTGAGAAAAAGAAAGTACTACAATATAATATAAAATTCGGACTCTCTTTTTATTTTACCCGTATAAATCCTATTAGTATTTGTATTTTGTCATAATATATATCGAGTCTTTATCAGCATGAGTAATTTGCATTCTTTTGTTATATTAGGTCTCAAACGAACCGGTAAGAGTTGCAGATTAAGGTGGCTTAATTATCTCCGCCCCGATGTTAGACGTGGAAACATCACACTTGAAGAACAACTTTTGATTCTCGAGCTCCATACTCGTTGGGGTAACCGGTAATAATATAAATTTTAAGAGTTTCATATGCCGGAACCAAAAATGTATTTATGAGCTTTAATTAAAACATTTTTCATCTTATAAACCAATTTCGTGAAGCTGAATTAGTCCAATTCAAATTTTACAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATATGCCGAACATTATCCATGCATCAATCAATTAAAAATAAATGTCTGGGATTCACCACCAAAAAAAATCAATTAAAAATAAATATCATTATTTTTAAACAAAATATACCAATTATTTTCTTCTTCTAATCATTTAACAAAGTGTTTCATTTTATCTATTTTAGATTTTTTTTTTAACCATTAATTTTGACAAAGATTATTTGTTTAATGATGGATTGCATCAGATGGTCGAAAATAGCTCAATATTTACCAGGAAGAACAGACAATGAAATAAAAAATTATTGGAGAACTCGTGTTCAAAAGCTTGCCAAACAACTCAAATGCGACGTGAATAGCAAGCAATTCAAGGACACCATGCGCTACCTTTGGATGCCGAGGCTAGTCGAACGTATTCAAGCCGCTGCTGCCACTACCACCACCACCACAGCCACCGCGACCAATACCTCATACAATAATAACGGCAGCAAAATGACGGGTTCAACTCCAACAACTATAAACTATGAATTTATGAGTTCACAACCACATATGACACAAAGTTATACCCTAGAGAACAGCAACACAACTGCATCATCAGATTCATTTGAGAATAAGGTGTCAACATTATCGGATTTGGGTGATAATAATTATTATTGTACAAGTGTTAGTAATAAGAATAACCCTAATGCTAATTCAAATTATTATCAACCTTCTCATCAACTTAGCTTCTCGGATTGTATCACAAGCCCGTCTGGATTGTTTTCTCAAGGATTAATGGATTTCCAATCCATGGAGCCAAACAACACGTGGATGCAAAGTGGGGACTCATCTGACATTTTTTGGAATGCTGAGAACATGTTGTTTTTACAGCAACAACTCATGAACGACACAATGTAA
Protein sequence

>MS.gene26812.t1

MDVKGRGSDNKNNLMSSEENEMDLRRGPWTVDEDLTLMNYIATHGEGRWNTLANSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGRTDNEIKNYWRTRVQKLAKQLKCDVNSKQFKDTMRYLWMPRLVEQNSNTTASSDSFENKVSTLSDLGDNNYYCTSVSNKNNPNANSNYYQPSHQLSFSDCITSPSGLFSQGLMDFQSMEPNNTWMQSGDSSDIFWNAENMLFLQQQLMNDTM