AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene061226


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061226.t1 MTR_4g123040 97.468 316 7 1 1 316 1 315 0.0 636
MS.gene061226.t1 MTR_2g033170 62.500 336 99 7 1 316 1 329 1.30e-118 345
MS.gene061226.t1 MTR_1g086530 47.667 300 107 8 17 314 26 277 2.61e-85 258
MS.gene061226.t1 MTR_1g086510 73.333 150 40 0 16 165 13 162 1.60e-82 250
MS.gene061226.t1 MTR_1g110460 60.335 179 68 1 19 197 21 196 3.56e-76 236
MS.gene061226.t1 MTR_7g035075 80.000 115 22 1 16 130 7 120 1.11e-64 203
MS.gene061226.t1 MTR_6g006030 78.899 109 23 0 23 131 13 121 6.10e-63 198
MS.gene061226.t1 MTR_1g045610 66.364 110 37 0 20 129 17 126 8.88e-50 166
MS.gene061226.t1 MTR_1g073170 64.286 112 38 1 18 129 16 125 5.29e-48 162
MS.gene061226.t1 MTR_5g029840 55.118 127 55 1 20 146 8 132 6.87e-45 156
MS.gene061226.t1 MTR_2g089620 60.748 107 42 0 20 126 8 114 9.60e-44 152
MS.gene061226.t1 MTR_8g027345 59.829 117 45 1 21 135 9 125 1.14e-43 152
MS.gene061226.t1 MTR_2g096380 56.364 110 48 0 23 132 5 114 1.81e-43 149
MS.gene061226.t1 MTR_4g125520 62.385 109 41 0 24 132 12 120 2.01e-43 151
MS.gene061226.t1 MTR_4g063100 57.407 108 46 0 25 132 8 115 2.59e-43 149
MS.gene061226.t1 MTR_7g117730 62.385 109 41 0 21 129 9 117 7.65e-43 148
MS.gene061226.t1 MTR_1g076150 54.545 121 55 0 20 140 8 128 2.55e-42 147
MS.gene061226.t1 MTR_2g011660 56.757 111 48 0 24 134 13 123 2.72e-42 149
MS.gene061226.t1 MTR_3g083540 63.208 106 39 0 21 126 38 143 2.80e-42 148
MS.gene061226.t1 MTR_3g052450 53.153 111 52 0 20 130 36 146 4.49e-42 152
MS.gene061226.t1 MTR_4g091490 56.757 111 48 0 24 134 13 123 5.18e-42 149
MS.gene061226.t1 MTR_1g017000 58.333 108 44 1 20 126 8 115 5.43e-42 146
MS.gene061226.t1 MTR_4g478180 56.522 115 50 0 20 134 9 123 5.55e-42 149
MS.gene061226.t1 MTR_3g074520 51.515 132 60 1 20 147 8 139 6.39e-42 148
MS.gene061226.t1 MTR_5g007370 54.783 115 52 0 20 134 8 122 2.03e-41 145
MS.gene061226.t1 MTR_1g062940 59.615 104 42 0 23 126 5 108 2.21e-41 143
MS.gene061226.t1 MTR_4g121460 44.785 163 81 2 20 182 8 161 3.52e-41 146
MS.gene061226.t1 MTR_7g115650 53.153 111 52 0 20 130 8 118 4.92e-41 142
MS.gene061226.t1 MTR_4g073420 48.718 156 68 2 26 172 14 166 5.87e-41 144
MS.gene061226.t1 MTR_7g011170 53.043 115 54 0 20 134 8 122 6.33e-41 145
MS.gene061226.t1 MTR_3g052430 53.704 108 50 0 23 130 40 147 8.05e-41 149
MS.gene061226.t1 MTR_6g012690 53.913 115 53 0 20 134 8 122 1.12e-40 145
MS.gene061226.t1 MTR_1g043080 36.364 231 135 4 24 251 12 233 1.21e-40 142
MS.gene061226.t1 MTR_1g100653 57.944 107 45 0 24 130 12 118 1.36e-40 144
MS.gene061226.t1 MTR_8g095390 61.386 101 39 0 26 126 14 114 1.87e-40 144
MS.gene061226.t1 MTR_8g098860 54.054 111 51 0 20 130 8 118 2.07e-40 144
MS.gene061226.t1 MTR_5g078140 53.043 115 54 0 20 134 8 122 2.23e-40 144
MS.gene061226.t1 MTR_7g096930 56.757 111 48 0 20 130 8 118 2.27e-40 142
MS.gene061226.t1 MTR_1g085040 54.310 116 53 0 24 139 12 127 2.71e-40 144
MS.gene061226.t1 MTR_7g076740 55.172 116 51 1 20 134 8 123 2.77e-40 143
MS.gene061226.t1 MTR_3g065440 53.043 115 54 0 20 134 8 122 2.94e-40 143
MS.gene061226.t1 MTR_4g102380 56.075 107 47 0 20 126 8 114 3.21e-40 142
MS.gene061226.t1 MTR_3g097450 61.386 101 39 0 26 126 14 114 5.58e-40 142
MS.gene061226.t1 MTR_2g097910 55.556 108 48 0 24 131 20 127 6.88e-40 142
MS.gene061226.t1 MTR_5g079670 48.760 121 62 0 20 140 7 127 1.07e-39 139
MS.gene061226.t1 MTR_2g099740 55.340 103 46 0 24 126 12 114 1.23e-39 144
MS.gene061226.t1 MTR_4g100720 57.798 109 46 0 24 132 13 121 1.30e-39 137
MS.gene061226.t1 MTR_5g010020 59.406 101 41 0 20 120 8 108 2.57e-39 141
MS.gene061226.t1 MTR_3g011610 55.340 103 46 0 24 126 37 139 3.07e-39 145
MS.gene061226.t1 MTR_4g082290 50.820 122 60 0 20 141 8 129 4.21e-39 142
MS.gene061226.t1 MTR_1g100667 51.200 125 59 2 18 141 7 130 4.35e-39 139
MS.gene061226.t1 MTR_1g043050 57.282 103 44 0 24 126 12 114 4.53e-39 138
MS.gene061226.t1 MTR_8g042410 56.311 103 45 0 24 126 37 139 4.66e-39 144
MS.gene061226.t1 MTR_8g017440 55.340 103 46 0 24 126 12 114 5.09e-39 140
MS.gene061226.t1 MTR_2g067420 56.731 104 45 0 20 123 10 113 5.26e-39 140
MS.gene061226.t1 MTR_7g110830 54.955 111 50 0 24 134 12 122 5.45e-39 141
MS.gene061226.t1 MTR_8g017540 35.345 232 117 5 24 255 58 256 6.32e-39 141
MS.gene061226.t1 MTR_8g020490 55.963 109 47 1 23 130 7 115 6.63e-39 138
MS.gene061226.t1 MTR_4g082230 50.820 122 60 0 20 141 8 129 7.85e-39 142
MS.gene061226.t1 MTR_4g065017 54.630 108 49 0 24 131 17 124 8.28e-39 140
MS.gene061226.t1 MTR_8g031360 55.963 109 47 1 19 126 8 116 9.25e-39 139
MS.gene061226.t1 MTR_4g485530 56.604 106 46 0 21 126 9 114 1.13e-38 135
MS.gene061226.t1 MTR_2g064160 53.398 103 48 0 24 126 11 113 1.46e-38 139
MS.gene061226.t1 MTR_1g021230 54.717 106 48 0 24 129 57 162 1.61e-38 141
MS.gene061226.t1 MTR_2g034790 56.075 107 47 0 20 126 8 114 1.73e-38 139
MS.gene061226.t1 MTR_7g010210 43.791 153 76 3 20 162 8 160 1.91e-38 139
MS.gene061226.t1 MTR_7g010210 43.791 153 76 3 20 162 8 160 4.83e-38 136
MS.gene061226.t1 MTR_8g017500 35.714 238 118 7 24 260 12 215 5.37e-38 138
MS.gene061226.t1 MTR_1g085640 54.054 111 51 0 24 134 12 122 5.45e-38 139
MS.gene061226.t1 MTR_0008s0280 52.727 110 52 0 20 129 8 117 5.67e-38 135
MS.gene061226.t1 MTR_0008s0390 56.190 105 46 0 24 128 13 117 9.13e-38 135
MS.gene061226.t1 MTR_0063s0090 48.438 128 59 1 20 147 8 128 1.21e-37 134
MS.gene061226.t1 MTR_7g111290 55.172 116 52 0 24 139 12 127 1.30e-37 138
MS.gene061226.t1 MTR_0251s0050 55.140 107 48 0 24 130 13 119 1.39e-37 135
MS.gene061226.t1 MTR_1g112760 55.556 108 47 1 24 130 13 120 2.95e-37 133
MS.gene061226.t1 MTR_3g039990 49.107 112 57 0 20 131 9 120 3.03e-37 135
MS.gene061226.t1 MTR_3g028740 52.033 123 53 2 7 129 11 127 3.11e-37 136
MS.gene061226.t1 MTR_7g087130 51.402 107 52 0 20 126 8 114 3.57e-37 135
MS.gene061226.t1 MTR_2g089450 55.140 107 48 0 20 126 8 114 3.65e-37 133
MS.gene061226.t1 MTR_0008s0470 55.238 105 47 0 24 128 13 117 3.84e-37 134
MS.gene061226.t1 MTR_2g089420 51.240 121 58 1 24 143 11 131 6.07e-37 137
MS.gene061226.t1 MTR_3g077110 55.556 108 47 1 24 130 12 119 7.09e-37 135
MS.gene061226.t1 MTR_8g017340 53.846 104 47 1 24 126 12 115 8.33e-37 137
MS.gene061226.t1 MTR_0140s0030 50.467 107 53 0 20 126 9 115 9.74e-37 134
MS.gene061226.t1 MTR_0489s0020 50.467 107 53 0 20 126 9 115 9.74e-37 134
MS.gene061226.t1 MTR_4g057635 54.630 108 48 1 20 126 8 115 1.37e-36 134
MS.gene061226.t1 MTR_8g006470 44.915 118 64 1 15 131 1 118 1.49e-36 132
MS.gene061226.t1 MTR_6g012180 53.398 103 48 0 20 122 8 110 2.85e-36 133
MS.gene061226.t1 MTR_6g009430 49.565 115 58 0 20 134 8 122 2.92e-36 133
MS.gene061226.t1 MTR_4g105130 54.630 108 48 1 24 130 12 119 2.97e-36 134
MS.gene061226.t1 MTR_6g055910 54.902 102 46 0 25 126 15 116 9.23e-36 130
MS.gene061226.t1 MTR_3g461490 48.780 123 62 1 23 144 11 133 1.67e-35 131
MS.gene061226.t1 MTR_3g103570 54.630 108 48 1 20 126 8 115 2.03e-35 131
MS.gene061226.t1 MTR_5g014990 52.586 116 52 2 20 132 8 123 3.11e-35 130
MS.gene061226.t1 MTR_8g017390 52.885 104 48 1 24 126 12 115 4.49e-35 132
MS.gene061226.t1 MTR_8g017350 51.923 104 49 1 24 126 12 115 4.55e-35 134
MS.gene061226.t1 MTR_1g017140 52.586 116 52 2 20 132 8 123 4.90e-35 130
MS.gene061226.t1 MTR_5g042030 48.673 113 58 0 22 134 5 117 9.11e-35 128
MS.gene061226.t1 MTR_2g095520 53.846 104 47 1 20 122 8 111 3.17e-34 127
MS.gene061226.t1 MTR_2g088170 50.000 116 54 1 15 126 16 131 6.51e-34 129
MS.gene061226.t1 MTR_4g128670 55.769 104 45 1 20 122 8 111 1.16e-33 126
MS.gene061226.t1 MTR_1g083630 50.000 110 55 0 20 129 8 117 2.40e-33 129
MS.gene061226.t1 MTR_7g109320 54.206 107 49 0 20 126 8 114 5.13e-33 125
MS.gene061226.t1 MTR_4g097570 54.902 102 45 1 20 120 8 109 5.59e-33 123
MS.gene061226.t1 MTR_5g062790 35.870 184 101 5 22 192 7 186 5.62e-33 124
MS.gene061226.t1 MTR_6g090405 51.852 108 51 1 20 126 8 115 6.04e-33 122
MS.gene061226.t1 MTR_7g102110 50.000 108 53 1 20 126 8 115 7.13e-33 122
MS.gene061226.t1 MTR_4g063100 64.935 77 27 0 56 132 10 86 1.20e-32 120
MS.gene061226.t1 MTR_5g088640 37.143 175 97 4 23 184 11 185 1.51e-32 122
MS.gene061226.t1 MTR_5g088080 37.143 175 97 4 23 184 11 185 2.01e-32 121
MS.gene061226.t1 MTR_5g088150 37.143 175 97 4 23 184 11 185 2.01e-32 121
MS.gene061226.t1 MTR_5g488210 37.143 175 97 4 23 184 11 185 2.01e-32 121
MS.gene061226.t1 MTR_5g488170 47.222 108 56 1 23 129 11 118 7.03e-32 119
MS.gene061226.t1 MTR_0197s0010 37.853 177 107 1 29 205 6 179 7.82e-32 119
MS.gene061226.t1 MTR_5g079120 40.828 169 87 4 19 183 56 215 1.02e-31 120
MS.gene061226.t1 MTR_4g097570 54.369 103 45 2 20 120 8 110 2.17e-31 119
MS.gene061226.t1 MTR_8g060940 54.455 101 46 0 24 124 7 107 3.15e-31 117
MS.gene061226.t1 MTR_2g096380 62.963 81 30 0 52 132 15 95 3.21e-31 117
MS.gene061226.t1 MTR_5g078910 49.074 108 55 0 19 126 2 109 8.00e-31 118
MS.gene061226.t1 MTR_5g079290 48.305 118 59 1 9 126 4 119 1.94e-30 116
MS.gene061226.t1 MTR_0247s0040 51.961 102 49 0 24 125 7 108 2.05e-30 114
MS.gene061226.t1 MTR_5g078800 50.000 108 54 0 19 126 2 109 5.29e-30 115
MS.gene061226.t1 MTR_4g029540 40.517 116 68 1 15 129 1 116 5.29e-30 115
MS.gene061226.t1 MTR_7g017260 45.669 127 59 2 2 126 11 129 7.36e-30 115
MS.gene061226.t1 MTR_5g079220 50.485 103 51 0 24 126 21 123 1.26e-29 114
MS.gene061226.t1 MTR_5g078950 50.980 102 50 0 24 125 7 108 2.15e-29 113
MS.gene061226.t1 MTR_0001s0360 50.485 103 51 0 24 126 7 109 3.21e-29 112
MS.gene061226.t1 MTR_5g078860 49.074 108 55 0 19 126 2 109 1.30e-28 112
MS.gene061226.t1 MTR_0193s0090 48.544 103 53 0 24 126 7 109 1.87e-28 109
MS.gene061226.t1 MTR_5g088610 43.119 109 61 1 22 129 7 115 2.14e-27 110
MS.gene061226.t1 MTR_5g078930 49.505 101 51 0 25 125 10 110 9.41e-27 105
MS.gene061226.t1 MTR_5g016510 35.673 171 98 4 22 192 1 159 9.97e-27 107
MS.gene061226.t1 MTR_6g055910 61.429 70 27 0 57 126 18 87 7.62e-26 103
MS.gene061226.t1 MTR_7g061330 44.231 104 57 1 23 126 110 212 8.27e-26 107
MS.gene061226.t1 MTR_7g461410 44.231 104 57 1 23 126 110 212 8.27e-26 107
MS.gene061226.t1 MTR_7g111290 58.333 84 35 0 56 139 2 85 9.37e-26 105
MS.gene061226.t1 MTR_7g061330 44.231 104 57 1 23 126 74 176 1.99e-25 106
MS.gene061226.t1 MTR_3g045430 40.476 126 74 1 16 140 5 130 4.58e-25 102
MS.gene061226.t1 MTR_4g128190 39.259 135 54 3 24 143 11 132 7.77e-25 100
MS.gene061226.t1 MTR_5g007300 53.247 77 36 0 24 100 64 140 9.55e-25 97.4
MS.gene061226.t1 MTR_3g110028 41.346 104 60 1 23 126 82 184 1.02e-24 105
MS.gene061226.t1 MTR_6g015455 47.475 99 51 1 22 120 1 98 2.29e-24 103
MS.gene061226.t1 MTR_6g027340 39.640 111 66 1 29 139 19 128 2.61e-24 98.2
MS.gene061226.t1 MTR_5g049190 43.158 95 53 1 26 120 19 112 1.17e-23 97.4
MS.gene061226.t1 MTR_4g019370 43.564 101 56 1 26 126 38 137 1.31e-23 99.4
MS.gene061226.t1 MTR_5g070020 35.461 141 89 2 2 141 97 236 1.76e-23 99.4
MS.gene061226.t1 MTR_1g026870 39.423 104 62 1 23 126 82 184 3.46e-23 100
MS.gene061226.t1 MTR_6g027360 37.931 116 71 1 24 139 76 190 5.87e-23 97.1
MS.gene061226.t1 MTR_3g101290 39.091 110 66 1 19 128 30 138 8.34e-23 94.7
MS.gene061226.t1 MTR_1g085880 42.609 115 64 2 14 126 1 115 1.97e-22 92.8
MS.gene061226.t1 MTR_3g077650 41.584 101 56 2 21 120 176 274 2.11e-22 97.4
MS.gene061226.t1 MTR_4g094982 41.905 105 60 1 22 126 1 104 2.19e-22 94.7
MS.gene061226.t1 MTR_6g074860 41.509 106 59 2 26 130 4 107 3.22e-22 93.6
MS.gene061226.t1 MTR_3g463400 42.268 97 55 1 24 120 131 226 3.93e-22 96.7
MS.gene061226.t1 MTR_4g105660 44.000 100 49 2 24 120 178 273 4.45e-22 96.3
MS.gene061226.t1 MTR_7g450950 40.187 107 63 1 26 132 157 262 5.58e-22 94.7
MS.gene061226.t1 MTR_7g037260 34.615 130 84 1 18 147 137 265 9.34e-22 94.4
MS.gene061226.t1 MTR_1g057980 38.095 126 75 2 2 127 58 180 1.02e-21 93.6
MS.gene061226.t1 MTR_1g085770 42.609 115 64 2 14 126 1 115 1.26e-21 93.2
MS.gene061226.t1 MTR_6g027370 29.947 187 112 4 26 209 99 269 7.95e-21 91.7
MS.gene061226.t1 MTR_5g041570 43.299 97 54 1 26 122 134 229 8.38e-21 92.4
MS.gene061226.t1 MTR_4g088015 35.200 125 80 1 23 147 218 341 1.19e-20 92.0
MS.gene061226.t1 MTR_5g082910 43.878 98 54 1 23 120 16 112 1.43e-20 90.1
MS.gene061226.t1 MTR_7g035350 42.424 99 56 1 29 127 228 325 1.50e-20 92.0
MS.gene061226.t1 MTR_4g082040 42.268 97 55 1 26 122 105 200 3.22e-20 90.9
MS.gene061226.t1 MTR_3g089045 35.659 129 82 1 16 144 6 133 6.84e-20 88.2
MS.gene061226.t1 MTR_5g010650 41.837 98 56 1 23 120 107 203 1.45e-19 89.4
MS.gene061226.t1 MTR_7g451170 43.750 96 51 2 26 120 191 284 1.47e-19 89.0
MS.gene061226.t1 MTR_7g061550 36.283 113 70 1 26 136 7 119 3.09e-19 87.4
MS.gene061226.t1 MTR_7g086960 39.091 110 65 2 26 135 89 196 4.47e-19 87.0
MS.gene061226.t1 MTR_7g037130 27.083 192 138 2 11 202 131 320 3.55e-18 84.3
MS.gene061226.t1 MTR_5g038910 37.069 116 72 1 14 129 14 128 7.88e-18 84.0
MS.gene061226.t1 MTR_5g038910 37.069 116 72 1 14 129 14 128 9.32e-18 83.6
MS.gene061226.t1 MTR_4g063100 62.745 51 19 0 82 132 1 51 1.32e-16 77.0
MS.gene061226.t1 MTR_8g468380 39.640 111 65 2 29 139 25 133 1.92e-16 79.7
MS.gene061226.t1 MTR_2g096380 62.745 51 19 0 82 132 1 51 4.18e-16 75.1
MS.gene061226.t1 MTR_0023s0210 40.260 77 46 0 24 100 7 83 5.29e-13 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene061226.t1 AT5G49620 76.136 176 40 1 1 174 1 176 1.38e-87 265
MS.gene061226.t1 AT3G06490 55.172 319 105 9 1 300 1 300 5.89e-85 259
MS.gene061226.t1 AT5G49620 70.526 190 40 2 1 174 1 190 6.43e-84 256
MS.gene061226.t1 AT1G48000 72.368 152 42 0 22 173 30 181 2.17e-83 252
MS.gene061226.t1 AT2G47190 45.333 300 118 6 17 315 13 267 2.08e-80 245
MS.gene061226.t1 AT1G68320 69.930 143 43 0 23 165 18 160 5.35e-73 227
MS.gene061226.t1 AT1G25340 66.187 139 47 0 19 157 13 151 9.19e-68 213
MS.gene061226.t1 AT3G27810 78.182 110 24 0 21 130 17 126 1.21e-63 201
MS.gene061226.t1 AT1G25340 63.309 139 46 1 19 157 13 146 3.34e-62 199
MS.gene061226.t1 AT1G25340 63.309 139 46 1 19 157 13 146 9.72e-62 199
MS.gene061226.t1 AT5G40350 78.302 106 23 0 21 126 14 119 5.51e-61 194
MS.gene061226.t1 AT3G01530 65.891 129 41 1 1 129 5 130 1.41e-59 190
MS.gene061226.t1 AT3G30210 56.452 124 54 0 3 126 6 129 1.69e-49 166
MS.gene061226.t1 AT3G24310 66.055 109 37 0 21 129 15 123 3.01e-49 165
MS.gene061226.t1 AT4G13480 67.619 105 34 0 25 129 7 111 3.12e-49 165
MS.gene061226.t1 AT3G46130 58.929 112 46 0 25 136 10 121 3.96e-45 154
MS.gene061226.t1 AT5G59780 59.091 110 45 0 23 132 7 116 5.48e-45 153
MS.gene061226.t1 AT3G02940 58.261 115 48 0 20 134 8 122 1.10e-44 155
MS.gene061226.t1 AT3G02940 58.261 115 48 0 20 134 8 122 2.02e-44 154
MS.gene061226.t1 AT3G02940 58.261 115 48 0 20 134 8 122 2.02e-44 154
MS.gene061226.t1 AT5G54230 57.658 111 47 0 24 134 12 122 1.59e-43 152
MS.gene061226.t1 AT5G40330 38.655 238 109 7 15 237 3 218 1.90e-43 149
MS.gene061226.t1 AT3G27810 85.135 74 11 0 57 130 4 77 2.40e-43 147
MS.gene061226.t1 AT3G13540 62.264 106 40 0 21 126 20 125 4.15e-43 149
MS.gene061226.t1 AT5G16770 52.206 136 63 2 20 153 8 143 4.90e-43 150
MS.gene061226.t1 AT5G16770 52.206 136 63 2 20 153 8 143 4.90e-43 150
MS.gene061226.t1 AT5G16770 52.206 136 63 2 20 153 8 143 7.83e-43 150
MS.gene061226.t1 AT5G16770 52.206 136 63 2 20 153 8 143 7.83e-43 150
MS.gene061226.t1 AT4G05100 55.172 116 52 0 19 134 8 123 2.60e-42 149
MS.gene061226.t1 AT5G15310 54.783 115 52 0 20 134 8 122 3.06e-42 146
MS.gene061226.t1 AT5G15310 54.783 115 52 0 20 134 8 122 3.40e-42 149
MS.gene061226.t1 AT4G28110 57.009 107 46 0 20 126 8 114 4.11e-42 147
MS.gene061226.t1 AT5G15310 54.783 115 52 0 20 134 8 122 4.55e-42 148
MS.gene061226.t1 AT3G01140 52.033 123 59 0 20 142 8 130 5.14e-42 149
MS.gene061226.t1 AT5G65230 53.226 124 58 0 16 139 4 127 5.78e-42 147
MS.gene061226.t1 AT4G21440 55.856 111 49 0 24 134 12 122 6.79e-42 148
MS.gene061226.t1 AT5G14750 55.856 111 49 0 16 126 8 118 9.87e-42 144
MS.gene061226.t1 AT4G34990 64.356 101 36 0 26 126 14 114 1.01e-41 146
MS.gene061226.t1 AT1G16490 57.944 107 45 0 20 126 10 116 1.01e-41 146
MS.gene061226.t1 AT3G01140 50.388 129 64 0 14 142 45 173 1.05e-41 149
MS.gene061226.t1 AT5G35550 63.462 104 38 0 23 126 13 116 1.97e-41 145
MS.gene061226.t1 AT4G12350 40.212 189 101 3 20 208 8 184 2.94e-41 145
MS.gene061226.t1 AT1G06180 44.311 167 92 1 20 186 8 173 3.58e-41 144
MS.gene061226.t1 AT3G53200 60.377 106 42 0 21 126 6 111 3.85e-41 143
MS.gene061226.t1 AT5G07690 57.692 104 44 0 24 127 12 115 3.88e-41 146
MS.gene061226.t1 AT1G34670 50.000 134 66 1 20 153 8 140 4.44e-41 147
MS.gene061226.t1 AT3G23250 57.944 107 45 0 20 126 8 114 5.25e-41 144
MS.gene061226.t1 AT1G18570 59.434 106 43 0 21 126 10 115 6.45e-41 146
MS.gene061226.t1 AT5G10280 54.783 115 52 0 20 134 8 122 6.83e-41 145
MS.gene061226.t1 AT2G31180 57.522 113 47 1 20 131 8 120 7.75e-41 143
MS.gene061226.t1 AT1G22640 53.719 121 56 0 20 140 8 128 8.25e-41 143
MS.gene061226.t1 AT4G22680 51.667 120 58 0 20 139 8 127 1.03e-40 143
MS.gene061226.t1 AT2G47460 58.879 107 44 0 20 126 8 114 1.33e-40 145
MS.gene061226.t1 AT5G14340 55.652 115 51 0 20 134 20 134 1.41e-40 143
MS.gene061226.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.47e-40 144
MS.gene061226.t1 AT5G40350 85.714 70 10 0 57 126 5 74 1.50e-40 139
MS.gene061226.t1 AT1G57560 60.194 103 41 0 24 126 12 114 1.54e-40 143
MS.gene061226.t1 AT4G26930 36.207 232 127 3 24 234 19 250 2.78e-40 145
MS.gene061226.t1 AT4G38620 61.386 101 39 0 26 126 14 114 3.21e-40 142
MS.gene061226.t1 AT1G56160 57.009 107 46 0 20 126 10 116 3.33e-40 142
MS.gene061226.t1 AT5G60890 46.853 143 75 1 21 162 9 151 3.73e-40 142
MS.gene061226.t1 AT1G09540 54.310 116 53 0 24 139 12 127 4.18e-40 144
MS.gene061226.t1 AT3G13890 52.336 107 51 0 20 126 8 114 5.92e-40 144
MS.gene061226.t1 AT1G79180 54.054 111 51 0 20 130 10 120 6.71e-40 142
MS.gene061226.t1 AT2G16720 60.396 101 40 0 26 126 14 114 7.51e-40 141
MS.gene061226.t1 AT1G35515 56.075 107 47 0 20 126 8 114 9.10e-40 139
MS.gene061226.t1 AT4G09460 60.396 101 40 0 26 126 14 114 1.04e-39 139
MS.gene061226.t1 AT5G07700 56.311 103 45 0 24 126 12 114 1.10e-39 142
MS.gene061226.t1 AT5G07700 56.311 103 45 0 24 126 12 114 1.10e-39 142
MS.gene061226.t1 AT3G47600 51.282 117 55 1 20 134 8 124 1.34e-39 142
MS.gene061226.t1 AT5G16600 52.174 115 55 0 20 134 8 122 1.42e-39 142
MS.gene061226.t1 AT1G66230 51.304 115 56 0 20 134 8 122 2.02e-39 140
MS.gene061226.t1 AT3G27920 52.500 120 54 1 18 137 8 124 2.05e-39 139
MS.gene061226.t1 AT5G26660 54.955 111 50 0 24 134 12 122 2.24e-39 142
MS.gene061226.t1 AT5G49330 57.944 107 45 0 20 126 8 114 2.72e-39 141
MS.gene061226.t1 AT5G61420 56.311 103 45 0 24 126 12 114 2.78e-39 142
MS.gene061226.t1 AT1G63910 54.054 111 51 0 20 130 8 118 2.83e-39 142
MS.gene061226.t1 AT3G61250 56.075 107 47 0 20 126 8 114 3.02e-39 140
MS.gene061226.t1 AT3G62610 57.009 107 46 0 20 126 8 114 3.03e-39 141
MS.gene061226.t1 AT3G11440 53.398 103 48 0 24 126 41 143 3.39e-39 144
MS.gene061226.t1 AT5G52600 55.046 109 49 0 18 126 6 114 1.29e-38 135
MS.gene061226.t1 AT2G26960 48.780 123 57 1 7 129 9 125 1.48e-38 141
MS.gene061226.t1 AT5G06100 53.271 107 50 0 20 126 28 134 1.92e-38 141
MS.gene061226.t1 AT3G11440 53.398 103 48 0 24 126 41 143 2.06e-38 143
MS.gene061226.t1 AT3G11440 53.398 103 48 0 24 126 41 143 2.06e-38 143
MS.gene061226.t1 AT3G11440 53.398 103 48 0 24 126 41 143 2.06e-38 143
MS.gene061226.t1 AT3G12720 52.427 103 49 0 24 126 22 124 3.98e-38 137
MS.gene061226.t1 AT5G55020 53.271 107 50 0 24 130 26 132 4.86e-38 141
MS.gene061226.t1 AT2G32460 53.398 103 48 0 24 126 6 108 6.49e-38 140
MS.gene061226.t1 AT2G32460 53.398 103 48 0 24 126 18 120 6.55e-38 140
MS.gene061226.t1 AT5G06100 49.167 120 61 0 7 126 15 134 6.89e-38 141
MS.gene061226.t1 AT5G06100 49.167 120 61 0 7 126 15 134 6.89e-38 141
MS.gene061226.t1 AT5G06100 49.167 120 61 0 7 126 15 134 6.89e-38 141
MS.gene061226.t1 AT5G06100 49.167 120 61 0 7 126 15 134 6.89e-38 141
MS.gene061226.t1 AT1G74080 56.311 103 45 0 24 126 12 114 8.11e-38 137
MS.gene061226.t1 AT5G62320 48.872 133 61 1 20 145 9 141 9.33e-38 135
MS.gene061226.t1 AT5G62470 50.000 112 56 0 20 131 8 119 1.37e-37 137
MS.gene061226.t1 AT3G08500 56.604 106 46 0 24 129 30 135 1.82e-37 137
MS.gene061226.t1 AT5G12870 51.852 108 52 0 24 131 18 125 1.87e-37 135
MS.gene061226.t1 AT4G17785 54.955 111 50 0 24 134 13 123 1.91e-37 137
MS.gene061226.t1 AT4G17785 54.955 111 50 0 24 134 13 123 2.54e-37 137
MS.gene061226.t1 AT4G37780 54.310 116 50 2 20 132 8 123 2.63e-37 135
MS.gene061226.t1 AT1G08810 47.899 119 62 0 20 138 8 126 3.10e-37 134
MS.gene061226.t1 AT1G74650 51.402 107 52 0 20 126 8 114 4.15e-37 135
MS.gene061226.t1 AT3G13890 48.276 116 51 1 20 126 8 123 5.43e-37 136
MS.gene061226.t1 AT4G01680 56.311 103 45 0 24 126 12 114 6.23e-37 132
MS.gene061226.t1 AT4G01680 56.311 103 45 0 24 126 12 114 1.41e-36 134
MS.gene061226.t1 AT3G28910 52.336 107 51 0 20 126 8 114 2.99e-36 133
MS.gene061226.t1 AT5G62470 50.000 112 55 1 20 131 8 118 1.29e-35 132
MS.gene061226.t1 AT4G25560 52.941 102 48 0 25 126 11 112 3.27e-35 129
MS.gene061226.t1 AT3G48920 47.059 119 60 1 8 126 5 120 4.28e-35 128
MS.gene061226.t1 AT5G57620 52.778 108 50 1 20 126 8 115 4.80e-35 130
MS.gene061226.t1 AT1G74430 53.704 108 49 1 24 130 12 119 6.16e-35 128
MS.gene061226.t1 AT3G12820 53.271 107 50 0 20 126 10 116 7.27e-35 127
MS.gene061226.t1 AT5G52260 52.252 111 53 0 16 126 4 114 7.95e-35 127
MS.gene061226.t1 AT5G56110 48.780 123 62 1 23 144 11 133 9.89e-35 129
MS.gene061226.t1 AT3G28470 50.485 103 51 0 20 122 8 110 1.18e-34 129
MS.gene061226.t1 AT5G23000 51.852 108 51 1 20 126 8 115 1.64e-34 128
MS.gene061226.t1 AT3G49690 52.778 108 50 1 20 126 8 115 2.05e-34 127
MS.gene061226.t1 AT2G36890 53.704 108 49 1 20 126 8 115 2.78e-34 127
MS.gene061226.t1 AT2G36890 53.704 108 49 1 20 126 49 156 5.17e-34 127
MS.gene061226.t1 AT5G65790 51.724 116 53 2 20 132 8 123 1.08e-33 127
MS.gene061226.t1 AT3G46130 62.791 86 32 0 51 136 4 89 2.28e-33 122
MS.gene061226.t1 AT1G79180 41.667 144 51 1 20 130 10 153 3.00e-33 125
MS.gene061226.t1 AT4G01680 50.435 115 45 1 24 126 12 126 3.76e-33 125
MS.gene061226.t1 AT5G59780 68.421 76 24 0 57 132 20 95 1.07e-32 120
MS.gene061226.t1 AT3G46130 66.250 80 27 0 57 136 20 99 1.11e-32 121
MS.gene061226.t1 AT3G60460 42.609 115 65 1 18 131 5 119 1.11e-32 123
MS.gene061226.t1 AT1G66370 48.696 115 59 0 19 133 3 117 4.77e-32 120
MS.gene061226.t1 AT1G18710 49.515 103 52 0 24 126 12 114 9.44e-31 117
MS.gene061226.t1 AT3G53200 67.143 70 23 0 57 126 9 78 2.98e-29 111
MS.gene061226.t1 AT1G66380 51.376 109 53 0 18 126 2 110 1.25e-28 107
MS.gene061226.t1 AT1G56650 53.398 103 48 0 24 126 8 110 6.07e-28 109
MS.gene061226.t1 AT5G26660 55.422 83 37 0 52 134 9 91 3.14e-27 108
MS.gene061226.t1 AT1G66390 53.398 103 48 0 24 126 8 110 3.37e-27 107
MS.gene061226.t1 AT5G35550 63.158 76 28 0 51 126 44 119 3.69e-27 107
MS.gene061226.t1 AT5G11050 39.831 118 70 1 3 120 82 198 1.21e-25 106
MS.gene061226.t1 AT2G26950 37.815 119 71 1 9 127 4 119 1.58e-25 105
MS.gene061226.t1 AT3G47600 57.500 80 32 1 57 134 39 118 1.74e-25 104
MS.gene061226.t1 AT3G12820 64.179 67 24 0 60 126 2 68 9.18e-25 99.4
MS.gene061226.t1 AT5G14750 62.687 67 25 0 60 126 18 84 9.56e-25 98.6
MS.gene061226.t1 AT3G09370 42.308 104 59 1 23 126 132 234 1.44e-24 103
MS.gene061226.t1 AT3G09370 38.542 96 57 2 26 120 83 177 4.53e-11 63.9
MS.gene061226.t1 AT3G09370 42.308 104 59 1 23 126 127 229 1.64e-24 103
MS.gene061226.t1 AT3G09370 38.542 96 57 2 26 120 78 172 4.88e-11 63.9
MS.gene061226.t1 AT3G09370 42.308 104 59 1 23 126 140 242 1.84e-24 103
MS.gene061226.t1 AT3G09370 38.542 96 57 2 26 120 91 185 4.29e-11 63.9
MS.gene061226.t1 AT5G11510 42.308 104 59 1 23 126 78 180 2.47e-24 103
MS.gene061226.t1 AT5G11510 42.308 104 59 1 23 126 78 180 2.47e-24 103
MS.gene061226.t1 AT5G11510 42.308 104 59 1 23 126 78 180 2.47e-24 103
MS.gene061226.t1 AT5G11510 42.308 104 59 1 23 126 78 180 2.69e-24 103
MS.gene061226.t1 AT5G11510 42.308 104 59 1 23 126 78 180 2.83e-24 103
MS.gene061226.t1 AT2G23290 42.478 113 64 1 14 126 1 112 2.96e-24 100
MS.gene061226.t1 AT5G58850 42.857 98 55 1 23 120 102 198 4.83e-24 101
MS.gene061226.t1 AT5G02320 41.346 104 60 1 23 126 124 226 5.11e-24 102
MS.gene061226.t1 AT5G02320 41.346 104 60 1 23 126 124 226 5.11e-24 102
MS.gene061226.t1 AT5G02320 41.346 104 60 1 23 126 64 166 1.08e-23 101
MS.gene061226.t1 AT4G18770 39.091 110 66 1 24 133 215 323 3.05e-23 99.4
MS.gene061226.t1 AT3G27785 44.211 95 52 1 26 120 189 282 3.63e-23 99.4
MS.gene061226.t1 AT4G32730 38.462 104 63 1 23 126 84 186 5.24e-23 100
MS.gene061226.t1 AT4G32730 38.462 104 63 1 23 126 84 186 5.24e-23 100
MS.gene061226.t1 AT4G32730 38.462 104 63 1 23 126 84 186 5.24e-23 100
MS.gene061226.t1 AT4G32730 38.462 104 63 1 23 126 84 186 5.24e-23 100
MS.gene061226.t1 AT4G32730 38.462 104 63 1 23 126 84 186 6.53e-23 99.8
MS.gene061226.t1 AT4G37260 39.316 117 65 2 22 138 9 119 2.01e-22 95.9
MS.gene061226.t1 AT1G69560 38.017 121 71 2 24 144 105 221 6.63e-22 94.7
MS.gene061226.t1 AT1G69560 38.655 119 69 2 26 144 123 237 7.79e-22 94.7
MS.gene061226.t1 AT3G29020 40.952 105 61 1 26 130 65 168 7.97e-22 92.4
MS.gene061226.t1 AT3G29020 40.952 105 61 1 26 130 67 170 8.94e-22 93.6
MS.gene061226.t1 AT5G17800 41.441 111 58 2 26 130 93 202 1.42e-21 93.6
MS.gene061226.t1 AT1G26780 42.424 99 56 1 24 122 96 193 2.57e-21 92.0
MS.gene061226.t1 AT1G26780 42.424 99 56 1 24 122 96 193 2.63e-21 93.2
MS.gene061226.t1 AT1G17950 41.905 105 60 1 26 130 5 108 2.77e-21 91.3
MS.gene061226.t1 AT2G39880 38.686 137 78 4 26 160 50 182 8.08e-21 92.0
MS.gene061226.t1 AT5G39700 37.500 136 81 3 5 137 33 167 9.33e-21 88.6
MS.gene061226.t1 AT3G09230 42.308 104 59 1 23 126 52 154 1.88e-20 91.3
MS.gene061226.t1 AT3G55730 40.594 101 59 1 26 126 56 155 2.77e-20 90.9
MS.gene061226.t1 AT5G67300 39.423 104 62 1 23 126 3 105 2.80e-20 89.7
MS.gene061226.t1 AT1G73410 43.519 108 54 2 26 130 6 109 3.77e-20 88.2
MS.gene061226.t1 AT1G73410 42.857 105 59 1 26 130 6 109 1.08e-19 85.9
MS.gene061226.t1 AT5G40360 32.787 122 81 1 6 127 138 258 1.11e-19 88.6
MS.gene061226.t1 AT2G25230 40.566 106 59 2 23 125 23 127 1.15e-19 86.7
MS.gene061226.t1 AT3G50060 38.462 104 63 1 23 126 3 105 1.60e-19 87.4
MS.gene061226.t1 AT1G22640 54.930 71 32 0 70 140 1 71 2.40e-19 84.7
MS.gene061226.t1 AT4G33450 36.800 125 72 2 6 130 5 122 5.17e-19 85.1
MS.gene061226.t1 AT3G23250 61.404 57 22 0 70 126 1 57 9.92e-19 84.0
MS.gene061226.t1 AT1G66380 53.947 76 35 0 51 126 2 77 4.65e-18 78.6
MS.gene061226.t1 AT3G46130 63.636 55 20 0 82 136 1 55 6.62e-18 80.9
MS.gene061226.t1 AT5G59780 66.667 51 17 0 82 132 1 51 7.14e-18 80.1
MS.gene061226.t1 AT1G14350 40.196 102 60 1 29 130 28 128 8.22e-18 84.0
MS.gene061226.t1 AT1G14350 40.196 102 60 1 29 130 28 128 8.22e-18 84.0
MS.gene061226.t1 AT1G71030 39.000 100 60 1 48 147 5 103 1.73e-17 79.7
MS.gene061226.t1 AT5G14750 57.895 57 24 0 70 126 1 57 2.87e-17 77.8
MS.gene061226.t1 AT5G14750 57.895 57 24 0 70 126 1 57 2.87e-17 77.8
MS.gene061226.t1 AT1G66380 47.619 84 44 0 18 101 2 85 3.09e-17 76.6
MS.gene061226.t1 AT2G37630 35.780 109 68 1 26 132 4 112 3.31e-17 81.6
MS.gene061226.t1 AT1G71030 42.353 85 49 0 63 147 5 89 5.29e-17 77.8
MS.gene061226.t1 AT1G18960 33.028 109 70 2 26 134 10 115 1.76e-16 79.0
MS.gene061226.t1 AT2G02820 36.719 128 68 3 29 148 33 155 2.32e-16 79.7
MS.gene061226.t1 AT2G02820 33.793 145 83 3 29 165 33 172 2.33e-16 79.7
MS.gene061226.t1 AT2G02820 36.719 128 68 3 29 148 33 155 3.33e-16 78.6
MS.gene061226.t1 AT4G00540 36.036 111 67 2 24 131 101 210 5.32e-16 78.6
MS.gene061226.t1 AT4G00540 36.036 111 67 2 24 131 99 208 9.24e-16 77.8
MS.gene061226.t1 AT5G40430 36.792 106 62 3 23 125 51 154 1.97e-15 75.1
MS.gene061226.t1 AT4G25560 57.778 45 19 0 82 126 2 46 1.32e-12 66.6

Find 80 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAGATTCATTTGAGAATA+AGG 0.220030 8.3:+5829810 MS.gene061226:CDS
GGTGTCAACATTATCGGATT+TGG 0.250594 8.3:+5829831 MS.gene061226:CDS
CTTTGCATCCACGTGTTGTT+TGG 0.278668 8.3:-5830012 None:intergenic
CCTTAATCTGCAACTCTTAC+CGG 0.284466 8.3:-5828942 None:intergenic
ATTTCATTGTCTGTTCTTCC+TGG 0.304702 8.3:-5829487 None:intergenic
TAATAATTTGAATTAGCATT+AGG 0.308302 8.3:-5829898 None:intergenic
GGAGAATCAATGGATGTAAA+AGG 0.315475 8.3:+5828228 None:intergenic
AATAATTTGAATTAGCATTA+GGG 0.316977 8.3:-5829897 None:intergenic
TTCTCATCAACTTAGCTTCT+CGG 0.318392 8.3:+5829927 MS.gene061226:CDS
ACCGGTTACCCCAACGAGTA+TGG 0.324396 8.3:-5829039 None:intergenic
AATTCATAGTTTATAGTTGT+TGG 0.330155 8.3:-5829724 None:intergenic
CCACGTGTTGTTTGGCTCCA+TGG 0.354528 8.3:-5830004 None:intergenic
TCCATACTCGTTGGGGTAAC+CGG 0.362765 8.3:+5829038 MS.gene061226:CDS
GTGTCAACATTATCGGATTT+GGG 0.369512 8.3:+5829832 MS.gene061226:CDS
CACGTCGCATTTGAGTTGTT+TGG 0.369835 8.3:-5829545 None:intergenic
GTTATTATTGTATGAGGTAT+TGG 0.376146 8.3:-5829677 None:intergenic
CAGTTGTGTTGCTGTTCTCT+AGG 0.378658 8.3:-5829783 None:intergenic
GAATAAGGTGTCAACATTAT+CGG 0.381527 8.3:+5829825 MS.gene061226:CDS
TCTCGAGCTCCATACTCGTT+GGG 0.385217 8.3:+5829030 MS.gene061226:CDS
AGGACACCATGCGCTACCTT+TGG 0.391149 8.3:+5829584 MS.gene061226:CDS
GGCTGTGGTGGTGGTGGTAG+TGG 0.399620 8.3:-5829647 None:intergenic
CGGTCCAAGGACCTCTTCTA+AGG 0.411951 8.3:-5828305 None:intergenic
GGTCGCGGTGGCTGTGGTGG+TGG 0.422372 8.3:-5829656 None:intergenic
CGCGGTGGCTGTGGTGGTGG+TGG 0.432814 8.3:-5829653 None:intergenic
GATTGTATCACAAGCCCGTC+TGG 0.440427 8.3:+5829949 MS.gene061226:CDS
GCTGCCGTTATTATTGTATG+AGG 0.444415 8.3:-5829683 None:intergenic
CGTGAATAGCAAGCAATTCA+AGG 0.449225 8.3:+5829564 MS.gene061226:CDS
ATGTTTCCACGTCTAACATC+GGG 0.453593 8.3:-5828983 None:intergenic
CATCCTCTTCACTACTCATA+AGG 0.460455 8.3:-5828275 None:intergenic
TTCTCGAGCTCCATACTCGT+TGG 0.464638 8.3:+5829029 MS.gene061226:CDS
ATTAATGGATTTCCAATCCA+TGG 0.471132 8.3:+5829987 MS.gene061226:CDS
AGGTCCTTGGACCGTGGATG+AGG 0.483198 8.3:+5828314 MS.gene061226:CDS
GGTATTGGTCGCGGTGGCTG+TGG 0.487246 8.3:-5829662 None:intergenic
ATAATATTTACCAGCAGAGT+TGG 0.487488 8.3:-5828394 None:intergenic
CCGGTAAGAGTTGCAGATTA+AGG 0.490055 8.3:+5828942 MS.gene061226:CDS
TGTTGTTTGGCTCCATGGAT+TGG 0.498220 8.3:-5829999 None:intergenic
CTACTCATGGTGAAGGTCGT+TGG 0.502603 8.3:+5828361 MS.gene061226:CDS
AGTTGTGTTGCTGTTCTCTA+GGG 0.503634 8.3:-5829782 None:intergenic
TCAATGGATGTAAAAGGAAG+AGG 0.504187 8.3:+5828234 None:intergenic
AATACCCTCGCCAACTCTGC+TGG 0.506355 8.3:+5828384 MS.gene061226:CDS
AACAACACGTGGATGCAAAG+TGG 0.511089 8.3:+5830015 MS.gene061226:CDS
ATTGGTCGCGGTGGCTGTGG+TGG 0.517445 8.3:-5829659 None:intergenic
GGTGGTAGTGGCAGCAGCAG+CGG 0.522004 8.3:-5829635 None:intergenic
ATGAATTACATTGCTACTCA+TGG 0.522275 8.3:+5828348 MS.gene061226:CDS
GAGTAGTGAAGAGGATGAGA+TGG 0.523912 8.3:+5828281 MS.gene061226:CDS
ATATTAGGTCTCAAACGAAC+CGG 0.530231 8.3:+5828923 MS.gene061226:intron
CGACTAGCCTCGGCATCCAA+AGG 0.537317 8.3:-5829600 None:intergenic
GATGTTTCCACGTCTAACAT+CGG 0.539759 8.3:-5828984 None:intergenic
AATACCTCATACAATAATAA+CGG 0.542895 8.3:+5829679 MS.gene061226:CDS
ATTGTATGAGGTATTGGTCG+CGG 0.543647 8.3:-5829671 None:intergenic
ACAACACGTGGATGCAAAGT+GGG 0.544322 8.3:+5830016 MS.gene061226:CDS
TGGACCTTAGAAGAGGTCCT+TGG 0.547752 8.3:+5828301 MS.gene061226:CDS
TAATAACGGCAGCAAAATGA+CGG 0.557589 8.3:+5829693 MS.gene061226:CDS
TGCGCTACCTTTGGATGCCG+AGG 0.557604 8.3:+5829593 MS.gene061226:CDS
AAGTCCTCATCCACGGTCCA+AGG 0.564665 8.3:-5828318 None:intergenic
CAACCTTATGAGTAGTGAAG+AGG 0.569142 8.3:+5828272 MS.gene061226:CDS
ATTTACCAGCAGAGTTGGCG+AGG 0.570629 8.3:-5828389 None:intergenic
TACATTGCTACTCATGGTGA+AGG 0.576865 8.3:+5828354 MS.gene061226:CDS
GTATAACTTTGTGTCATATG+TGG 0.578588 8.3:-5829760 None:intergenic
TAGAAGAGGTCCTTGGACCG+TGG 0.586488 8.3:+5828308 MS.gene061226:CDS
TGAATACGTTCGACTAGCCT+CGG 0.590922 8.3:-5829610 None:intergenic
CGGCATCCAAAGGTAGCGCA+TGG 0.593311 8.3:-5829590 None:intergenic
CTCCGCCCCGATGTTAGACG+TGG 0.599725 8.3:+5828977 MS.gene061226:CDS
CTCGAGCTCCATACTCGTTG+GGG 0.606500 8.3:+5829031 MS.gene061226:CDS
AAAATAGCTCAATATTTACC+AGG 0.611015 8.3:+5829469 MS.gene061226:CDS
AATAACGGCAGCAAAATGAC+GGG 0.612004 8.3:+5829694 MS.gene061226:CDS
GAGAAGCTAAGTTGATGAGA+AGG 0.613417 8.3:-5829925 None:intergenic
CTTGAGAAAACAATCCAGAC+GGG 0.614227 8.3:-5829963 None:intergenic
GAGTAGCAATGTAATTCATG+AGG 0.616394 8.3:-5828344 None:intergenic
CCATGGAGCCAAACAACACG+TGG 0.620461 8.3:+5830004 MS.gene061226:CDS
CCTTGAGAAAACAATCCAGA+CGG 0.624342 8.3:-5829964 None:intergenic
GATGAGATGGACCTTAGAAG+AGG 0.635141 8.3:+5828294 MS.gene061226:CDS
GTAAGAGTTGCAGATTAAGG+TGG 0.637890 8.3:+5828945 MS.gene061226:CDS
AGTAGCAATGTAATTCATGA+GGG 0.639227 8.3:-5828343 None:intergenic
GAGGGTTAAGTCCTCATCCA+CGG 0.648641 8.3:-5828325 None:intergenic
TTTACCAGCAGAGTTGGCGA+GGG 0.653027 8.3:-5828388 None:intergenic
CAACACGTGGATGCAAAGTG+GGG 0.667014 8.3:+5830017 MS.gene061226:CDS
GTATGAGGTATTGGTCGCGG+TGG 0.702446 8.3:-5829668 None:intergenic
TGTTTCCACGTCTAACATCG+GGG 0.724931 8.3:-5828982 None:intergenic
TTCCACGTCTAACATCGGGG+CGG 0.772697 8.3:-5828979 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACAATGAAATTAAAAATTAT+TGG + chr8.3:5829500-5829519 MS.gene061226:CDS 10.0%
!! CTACAATATAATATAAAATT+CGG + chr8.3:5828799-5828818 MS.gene061226:intron 10.0%
!! CTTAAAATTTATATTATTAC+CGG - chr8.3:5829060-5829079 None:intergenic 10.0%
!! TATATTTGTAAAATTTGAAT+TGG - chr8.3:5829173-5829192 None:intergenic 10.0%
!! AAAGATTATTTGTTTAATGA+TGG + chr8.3:5829429-5829448 MS.gene061226:intron 15.0%
!! AAATACTAATAGGATTTATA+CGG - chr8.3:5828843-5828862 None:intergenic 15.0%
!! AATAATTTGAATTAGCATTA+GGG - chr8.3:5829900-5829919 None:intergenic 15.0%
!! ATAATCTTTGTCAAAATTAA+TGG - chr8.3:5829418-5829437 None:intergenic 15.0%
!! ATCAATTAAAAATAAATGTC+TGG + chr8.3:5829264-5829283 MS.gene061226:intron 15.0%
!! GAAAAAAGGAAAAAATAAAA+TGG + chr8.3:5828719-5828738 MS.gene061226:intron 15.0%
!! TAATAATTTGAATTAGCATT+AGG - chr8.3:5829901-5829920 None:intergenic 15.0%
!! TCAATTAAAAATAAATGTCT+GGG + chr8.3:5829265-5829284 MS.gene061226:intron 15.0%
!!! AACATTAATCATATGATTTT+TGG - chr8.3:5828760-5828779 None:intergenic 15.0%
!!! TTTTAATTGATTTTTTTTGG+TGG - chr8.3:5829296-5829315 None:intergenic 15.0%
!! AATACCTCATACAATAATAA+CGG + chr8.3:5829679-5829698 MS.gene061226:CDS 20.0%
!! AATACTAATAGGATTTATAC+GGG - chr8.3:5828842-5828861 None:intergenic 20.0%
!! AATTCATAGTTTATAGTTGT+TGG - chr8.3:5829727-5829746 None:intergenic 20.0%
!! ATATATATTGTGATATGCAT+TGG + chr8.3:5828582-5828601 MS.gene061226:intron 20.0%
!! GACAAAATACAAATACTAAT+AGG - chr8.3:5828853-5828872 None:intergenic 20.0%
!! GATTAGAAGAAGAAAATAAT+TGG - chr8.3:5829349-5829368 None:intergenic 20.0%
!! TAATGAAAAGAAGTGATAAA+AGG - chr8.3:5828483-5828502 None:intergenic 20.0%
!! TGAAATTTGTCAATATTCAT+TGG + chr8.3:5828669-5828688 MS.gene061226:intron 20.0%
!!! AAAGCTCATAAATACATTTT+TGG - chr8.3:5829100-5829119 None:intergenic 20.0%
!!! ATTAATCATATGATTTTTGG+TGG - chr8.3:5828757-5828776 None:intergenic 20.0%
!!! ATTTTTAATTGATTGATGCA+TGG - chr8.3:5829257-5829276 None:intergenic 20.0%
!!! TTGCATTCTTTTGTTATATT+AGG + chr8.3:5828908-5828927 MS.gene061226:intron 20.0%
! AAAATAGCTCAATATTTACC+AGG + chr8.3:5829469-5829488 MS.gene061226:CDS 25.0%
! ATCAGATTCATTTGAGAATA+AGG + chr8.3:5829810-5829829 MS.gene061226:CDS 25.0%
! ATTCATTGGATATAATTGCT+TGG + chr8.3:5828683-5828702 MS.gene061226:intron 25.0%
! GTTATTATTGTATGAGGTAT+TGG - chr8.3:5829680-5829699 None:intergenic 25.0%
! TCCACATGTATCATATAATA+AGG - chr8.3:5828608-5828627 None:intergenic 25.0%
!! ATTGTTTTCTCAAGGATTAA+TGG + chr8.3:5829972-5829991 MS.gene061226:CDS 25.0%
!! GCTTTTCAATGGTAATTTAA+TGG - chr8.3:5828529-5828548 None:intergenic 25.0%
!! TCAATGGTAATTTAATGGAT+CGG - chr8.3:5828524-5828543 None:intergenic 25.0%
!!! ATTTTAAGAGTTTCATATGC+CGG + chr8.3:5829072-5829091 MS.gene061226:intron 25.0%
!!! CATAAATACATTTTTGGTTC+CGG - chr8.3:5829094-5829113 None:intergenic 25.0%
!!! TTTTTCCTTTTTTCACAAGT+GGG - chr8.3:5828713-5828732 None:intergenic 25.0%
!!! TTTTTTCCTTTTTTCACAAG+TGG - chr8.3:5828714-5828733 None:intergenic 25.0%
ACTCTGCTGGTAAATATTAT+TGG + chr8.3:5828397-5828416 MS.gene061226:intron 30.0%
AGTAGCAATGTAATTCATGA+GGG - chr8.3:5828346-5828365 None:intergenic 30.0%
ATAATATTTACCAGCAGAGT+TGG - chr8.3:5828397-5828416 None:intergenic 30.0%
ATGAATTACATTGCTACTCA+TGG + chr8.3:5828348-5828367 MS.gene061226:CDS 30.0%
ATTGATGCATGGATAATGTT+CGG - chr8.3:5829246-5829265 None:intergenic 30.0%
GTATAACTTTGTGTCATATG+TGG - chr8.3:5829763-5829782 None:intergenic 30.0%
! CTTCTTTTCATTACCACAAA+TGG + chr8.3:5828490-5828509 MS.gene061226:intron 30.0%
! GAATAAGGTGTCAACATTAT+CGG + chr8.3:5829825-5829844 MS.gene061226:CDS 30.0%
! GCCTTATTATATGATACATG+TGG + chr8.3:5828604-5828623 MS.gene061226:intron 30.0%
! TTTTCATTACCACAAATGGA+TGG + chr8.3:5828494-5828513 MS.gene061226:intron 30.0%
!! ATTAATGGATTTCCAATCCA+TGG + chr8.3:5829987-5830006 MS.gene061226:CDS 30.0%
!!! AATCATATGATTTTTGGTGG+AGG - chr8.3:5828754-5828773 None:intergenic 30.0%
AGTCACAAAACCACAAACTT+TGG - chr8.3:5828551-5828570 None:intergenic 35.0%
ATATTAGGTCTCAAACGAAC+CGG + chr8.3:5828923-5828942 MS.gene061226:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG - chr8.3:5829490-5829509 None:intergenic 35.0%
CATTGAAAAGCCAAAGTTTG+TGG + chr8.3:5828538-5828557 MS.gene061226:intron 35.0%
CTAATTCAGCTTCACGAAAT+TGG - chr8.3:5829149-5829168 None:intergenic 35.0%
GAGTAGCAATGTAATTCATG+AGG - chr8.3:5828347-5828366 None:intergenic 35.0%
GTGTCAACATTATCGGATTT+GGG + chr8.3:5829832-5829851 MS.gene061226:CDS 35.0%
TAATAACGGCAGCAAAATGA+CGG + chr8.3:5829693-5829712 MS.gene061226:CDS 35.0%
TAGAGAGAAGAGGCTAATTT+AGG - chr8.3:5828426-5828445 None:intergenic 35.0%
TTCTCATCAACTTAGCTTCT+CGG + chr8.3:5829927-5829946 MS.gene061226:CDS 35.0%
!! TAATGATGGATTGCATCAGA+TGG + chr8.3:5829443-5829462 MS.gene061226:intron 35.0%
!!! CACAAACTTTGGCTTTTCAA+TGG - chr8.3:5828540-5828559 None:intergenic 35.0%
AATAACGGCAGCAAAATGAC+GGG + chr8.3:5829694-5829713 MS.gene061226:CDS 40.0%
ATCACATAGGTAGAGAGAAG+AGG - chr8.3:5828436-5828455 None:intergenic 40.0%
ATCGGATAACCATCCATTTG+TGG - chr8.3:5828506-5828525 None:intergenic 40.0%
ATGTTTCCACGTCTAACATC+GGG - chr8.3:5828986-5829005 None:intergenic 40.0%
CAACCTTATGAGTAGTGAAG+AGG + chr8.3:5828272-5828291 MS.gene061226:CDS 40.0%
CATCCTCTTCACTACTCATA+AGG - chr8.3:5828278-5828297 None:intergenic 40.0%
CCTTAATCTGCAACTCTTAC+CGG - chr8.3:5828945-5828964 None:intergenic 40.0%
CCTTGAGAAAACAATCCAGA+CGG - chr8.3:5829967-5829986 None:intergenic 40.0%
CGTGAATAGCAAGCAATTCA+AGG + chr8.3:5829564-5829583 MS.gene061226:CDS 40.0%
CTTGAGAAAACAATCCAGAC+GGG - chr8.3:5829966-5829985 None:intergenic 40.0%
GATGTTTCCACGTCTAACAT+CGG - chr8.3:5828987-5829006 None:intergenic 40.0%
GCTGCCGTTATTATTGTATG+AGG - chr8.3:5829686-5829705 None:intergenic 40.0%
GGATGTAATTGTCTCTAGCT+AGG + chr8.3:5828625-5828644 MS.gene061226:intron 40.0%
GGTGTCAACATTATCGGATT+TGG + chr8.3:5829831-5829850 MS.gene061226:CDS 40.0%
GTAAGAGTTGCAGATTAAGG+TGG + chr8.3:5828945-5828964 MS.gene061226:CDS 40.0%
TACATTGCTACTCATGGTGA+AGG + chr8.3:5828354-5828373 MS.gene061226:CDS 40.0%
TCTCTCTACCTATGTGATTG+TGG + chr8.3:5828438-5828457 MS.gene061226:intron 40.0%
! AGTTGTGTTGCTGTTCTCTA+GGG - chr8.3:5829785-5829804 None:intergenic 40.0%
!! ATTGTATGAGGTATTGGTCG+CGG - chr8.3:5829674-5829693 None:intergenic 40.0%
!! GAGAAGCTAAGTTGATGAGA+AGG - chr8.3:5829928-5829947 None:intergenic 40.0%
!!! GGGACTCATCTGACATTTTT+TGG + chr8.3:5830037-5830056 MS.gene061226:CDS 40.0%
AACAACACGTGGATGCAAAG+TGG + chr8.3:5830015-5830034 MS.gene061226:CDS 45.0%
ACAACACGTGGATGCAAAGT+GGG + chr8.3:5830016-5830035 MS.gene061226:CDS 45.0%
CCGGTAAGAGTTGCAGATTA+AGG + chr8.3:5828942-5828961 MS.gene061226:CDS 45.0%
GAGTAGTGAAGAGGATGAGA+TGG + chr8.3:5828281-5828300 MS.gene061226:CDS 45.0%
GATGAGATGGACCTTAGAAG+AGG + chr8.3:5828294-5828313 MS.gene061226:CDS 45.0%
TACGTGCACCACAATCACAT+AGG - chr8.3:5828449-5828468 None:intergenic 45.0%
TGTTTCCACGTCTAACATCG+GGG - chr8.3:5828985-5829004 None:intergenic 45.0%
! CAGTTGTGTTGCTGTTCTCT+AGG - chr8.3:5829786-5829805 None:intergenic 45.0%
! CCGTCTGGATTGTTTTCTCA+AGG + chr8.3:5829964-5829983 MS.gene061226:CDS 45.0%
! CTTTGCATCCACGTGTTGTT+TGG - chr8.3:5830015-5830034 None:intergenic 45.0%
! TGTTGTTTGGCTCCATGGAT+TGG - chr8.3:5830002-5830021 None:intergenic 45.0%
!! CACGTCGCATTTGAGTTGTT+TGG - chr8.3:5829548-5829567 None:intergenic 45.0%
!! TGAATACGTTCGACTAGCCT+CGG - chr8.3:5829613-5829632 None:intergenic 45.0%
!!! TATTTTTAATTGATTTTTTT+TGG - chr8.3:5829299-5829318 None:intergenic 5.0%
ATTTACCAGCAGAGTTGGCG+AGG - chr8.3:5828392-5828411 None:intergenic 50.0%
CAACACGTGGATGCAAAGTG+GGG + chr8.3:5830017-5830036 MS.gene061226:CDS 50.0%
CTACTCATGGTGAAGGTCGT+TGG + chr8.3:5828361-5828380 MS.gene061226:CDS 50.0%
GAGGGTTAAGTCCTCATCCA+CGG - chr8.3:5828328-5828347 None:intergenic 50.0%
GATTGTATCACAAGCCCGTC+TGG + chr8.3:5829949-5829968 MS.gene061226:CDS 50.0%
TCCATACTCGTTGGGGTAAC+CGG + chr8.3:5829038-5829057 MS.gene061226:CDS 50.0%
TCTCGAGCTCCATACTCGTT+GGG + chr8.3:5829030-5829049 MS.gene061226:CDS 50.0%
TGGACCTTAGAAGAGGTCCT+TGG + chr8.3:5828301-5828320 MS.gene061226:CDS 50.0%
TTCTCGAGCTCCATACTCGT+TGG + chr8.3:5829029-5829048 MS.gene061226:CDS 50.0%
TTTACCAGCAGAGTTGGCGA+GGG - chr8.3:5828391-5828410 None:intergenic 50.0%
AAGTCCTCATCCACGGTCCA+AGG - chr8.3:5828321-5828340 None:intergenic 55.0%
AATACCCTCGCCAACTCTGC+TGG + chr8.3:5828384-5828403 MS.gene061226:CDS 55.0%
ACCGGTTACCCCAACGAGTA+TGG - chr8.3:5829042-5829061 None:intergenic 55.0%
AGGACACCATGCGCTACCTT+TGG + chr8.3:5829584-5829603 MS.gene061226:CDS 55.0%
CCATGGAGCCAAACAACACG+TGG + chr8.3:5830004-5830023 MS.gene061226:CDS 55.0%
CGGTCCAAGGACCTCTTCTA+AGG - chr8.3:5828308-5828327 None:intergenic 55.0%
CTCGAGCTCCATACTCGTTG+GGG + chr8.3:5829031-5829050 MS.gene061226:CDS 55.0%
GCGCGCCCACTTGTGAAAAA+AGG + chr8.3:5828705-5828724 MS.gene061226:intron 55.0%
TAGAAGAGGTCCTTGGACCG+TGG + chr8.3:5828308-5828327 MS.gene061226:CDS 55.0%
TTCCACGTCTAACATCGGGG+CGG - chr8.3:5828982-5829001 None:intergenic 55.0%
!! CCACGTGTTGTTTGGCTCCA+TGG - chr8.3:5830007-5830026 None:intergenic 55.0%
!! GTATGAGGTATTGGTCGCGG+TGG - chr8.3:5829671-5829690 None:intergenic 55.0%
AGGTCCTTGGACCGTGGATG+AGG + chr8.3:5828314-5828333 MS.gene061226:CDS 60.0%
CGGCATCCAAAGGTAGCGCA+TGG - chr8.3:5829593-5829612 None:intergenic 60.0%
TGCGCTACCTTTGGATGCCG+AGG + chr8.3:5829593-5829612 MS.gene061226:CDS 60.0%
!! CGACTAGCCTCGGCATCCAA+AGG - chr8.3:5829603-5829622 None:intergenic 60.0%
ATTGGTCGCGGTGGCTGTGG+TGG - chr8.3:5829662-5829681 None:intergenic 65.0%
CTCCGCCCCGATGTTAGACG+TGG + chr8.3:5828977-5828996 MS.gene061226:CDS 65.0%
!! GGCTGTGGTGGTGGTGGTAG+TGG - chr8.3:5829650-5829669 None:intergenic 65.0%
!! GGTATTGGTCGCGGTGGCTG+TGG - chr8.3:5829665-5829684 None:intergenic 65.0%
!! GGTGGTAGTGGCAGCAGCAG+CGG - chr8.3:5829638-5829657 None:intergenic 65.0%
GGTCGCGGTGGCTGTGGTGG+TGG - chr8.3:5829659-5829678 None:intergenic 75.0%
!! CGCGGTGGCTGTGGTGGTGG+TGG - chr8.3:5829656-5829675 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 5828237 5830113 5828237 ID=MS.gene061226
chr8.3 mRNA 5828237 5830113 5828237 ID=MS.gene061226.t1;Parent=MS.gene061226
chr8.3 exon 5828237 5828405 5828237 ID=MS.gene061226.t1.exon1;Parent=MS.gene061226.t1
chr8.3 CDS 5828237 5828405 5828237 ID=cds.MS.gene061226.t1;Parent=MS.gene061226.t1
chr8.3 exon 5828930 5829059 5828930 ID=MS.gene061226.t1.exon2;Parent=MS.gene061226.t1
chr8.3 CDS 5828930 5829059 5828930 ID=cds.MS.gene061226.t1;Parent=MS.gene061226.t1
chr8.3 exon 5829462 5830113 5829462 ID=MS.gene061226.t1.exon3;Parent=MS.gene061226.t1
chr8.3 CDS 5829462 5830113 5829462 ID=cds.MS.gene061226.t1;Parent=MS.gene061226.t1
Gene Sequence

>MS.gene061226

ATGGATGTAAAAGGAAGAGGAAGCGACAACAAAAACAACCTTATGAGTAGTGAAGAGGATGAGATGGACCTTAGAAGAGGTCCTTGGACCGTGGATGAGGACTTAACCCTCATGAATTACATTGCTACTCATGGTGAAGGTCGTTGGAATACCCTCGCCAACTCTGCTGGTAAATATTATTGGTTTCCTAAATTAGCCTCTTCTCTCTACCTATGTGATTGTGGTGCACGTACTTAATTAGTTCCTTTTATCACTTCTTTTCATTACCACAAATGGATGGTTATCCGATCCATTAAATTACCATTGAAAAGCCAAAGTTTGTGGTTTTGTGACTATAATAGTGAAATATATATTGTGATATGCATTGGCCTTATTATATGATACATGTGGATGTAATTGTCTCTAGCTAGGTTTATAATAAGTTAGCATATATGAAATTTGTCAATATTCATTGGATATAATTGCTTGGCGCGCCCACTTGTGAAAAAAGGAAAAAATAAAATGGATTGATACACCTCCACCAAAAATCATATGATTAATGTTTCTTGAGAAAAAGAAAGTACTACAATATAATATAAAATTCGGACTCTCTTTCTATTTTACCCGTATAAATCCTATTAGTATTTGTATTTTGTCATAATATATATCGAGTCTTTATCAGCATGAGTAATTTGCATTCTTTTGTTATATTAGGTCTCAAACGAACCGGTAAGAGTTGCAGATTAAGGTGGCTTAATTATCTCCGCCCCGATGTTAGACGTGGAAACATCACACTTGAAGAACAACTTTTGATTCTCGAGCTCCATACTCGTTGGGGTAACCGGTAATAATATAAATTTTAAGAGTTTCATATGCCGGAACCAAAAATGTATTTATGAGCTTTAATTAAAACATTTTTCATCTTATAAACCAATTTCGTGAAGCTGAATTAGTCCAATTCAAATTTTACAAATATATATATATATATATATATATATATATATATATATATATATATATATATACGCCGAACATTATCCATGCATCAATCAATTAAAAATAAATGTCTGGGATTCACCACCAAAAAAAATCAATTAAAAATAAATATCATTATTTTTAAACAAAATATACCAATTATTTTCTTCTTCTAATCATTTAACAAAGTGTTTCATTTTATCTATTTTAGATTTTTTTTTTAACCATTAATTTTGACAAAGATTATTTGTTTAATGATGGATTGCATCAGATGGTCGAAAATAGCTCAATATTTACCAGGAAGAACAGACAATGAAATTAAAAATTATTGGAGAACTCGTGTTCAAAAGCTTGCCAAACAACTCAAATGCGACGTGAATAGCAAGCAATTCAAGGACACCATGCGCTACCTTTGGATGCCGAGGCTAGTCGAACGTATTCAAGCCGCTGCTGCTGCCACTACCACCACCACCACAGCCACCGCGACCAATACCTCATACAATAATAACGGCAGCAAAATGACGGGTTCAACTCCAACAACTATAAACTATGAATTTATGAGTTCACAACCACATATGACACAAAGTTATACCCTAGAGAACAGCAACACAACTGCATCATCAGATTCATTTGAGAATAAGGTGTCAACATTATCGGATTTGGGTGATAATAATTATTATTGTACAAGTGTTAGTAATAAGAATAACCCTAATGCTAATTCAAATTATTATCAACCTTCTCATCAACTTAGCTTCTCGGATTGTATCACAAGCCCGTCTGGATTGTTTTCTCAAGGATTAATGGATTTCCAATCCATGGAGCCAAACAACACGTGGATGCAAAGTGGGGACTCATCTGACATTTTTTGGAATGCTGAGAACATGTTGTTTTTACAGCAACAACTCATGAACGACACAATGTAA

Protein sequence

>MS.gene061226.t1

MDVKGRGSDNKNNLMSSEEDEMDLRRGPWTVDEDLTLMNYIATHGEGRWNTLANSAGLKRTGKSCRLRWLNYLRPDVRRGNITLEEQLLILELHTRWGNRWSKIAQYLPGRTDNEIKNYWRTRVQKLAKQLKCDVNSKQFKDTMRYLWMPRLVERIQAAAAATTTTTTATATNTSYNNNGSKMTGSTPTTINYEFMSSQPHMTQSYTLENSNTTASSDSFENKVSTLSDLGDNNYYCTSVSNKNNPNANSNYYQPSHQLSFSDCITSPSGLFSQGLMDFQSMEPNNTWMQSGDSSDIFWNAENMLFLQQQLMNDTM