Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27144.t1 | XP_013452118.1 | 96.5 | 761 | 23 | 2 | 1 | 757 | 1 | 761 | 0.00E+00 | 1391.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27144.t1 | F4I4B6 | 64.4 | 753 | 248 | 8 | 12 | 755 | 6 | 747 | 5.8e-255 | 881.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27144.t1 | A0A072U9N7 | 96.5 | 761 | 23 | 2 | 1 | 757 | 1 | 761 | 0.0e+00 | 1391.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene059433 | MS.gene27144 | PPI |
| MS.gene067568 | MS.gene27144 | PPI |
| MS.gene006891 | MS.gene27144 | PPI |
| MS.gene56433 | MS.gene27144 | PPI |
| MS.gene27144 | MS.gene059432 | PPI |
| MS.gene27144 | MS.gene006890 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27144.t1 | MTR_6g045363 | 96.452 | 761 | 23 | 2 | 1 | 757 | 1 | 761 | 0.0 | 1499 |
| MS.gene27144.t1 | MTR_1g111120 | 88.609 | 755 | 80 | 3 | 3 | 752 | 1 | 754 | 0.0 | 1320 |
| MS.gene27144.t1 | MTR_4g005930 | 56.878 | 756 | 303 | 12 | 14 | 757 | 8 | 752 | 0.0 | 763 |
| MS.gene27144.t1 | MTR_4g083940 | 35.577 | 728 | 426 | 18 | 45 | 747 | 18 | 727 | 6.25e-117 | 370 |
| MS.gene27144.t1 | MTR_1g069620 | 24.933 | 750 | 497 | 16 | 11 | 735 | 21 | 729 | 1.38e-47 | 182 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27144.t1 | AT1G10385 | 63.984 | 758 | 243 | 9 | 12 | 755 | 6 | 747 | 0.0 | 929 |
| MS.gene27144.t1 | AT5G49830 | 55.902 | 737 | 299 | 11 | 26 | 752 | 15 | 735 | 0.0 | 739 |
| MS.gene27144.t1 | AT5G49830 | 53.585 | 767 | 301 | 10 | 26 | 752 | 15 | 766 | 0.0 | 724 |
| MS.gene27144.t1 | AT5G49830 | 56.108 | 704 | 286 | 8 | 58 | 752 | 108 | 797 | 0.0 | 712 |
| MS.gene27144.t1 | AT1G10180 | 33.611 | 720 | 417 | 17 | 45 | 737 | 18 | 703 | 3.38e-110 | 353 |
Find 129 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTGAATTCTCAAATGTATT+TGG | 0.109776 | 6.2:-50972805 | MS.gene27144:CDS |
| ATAATTTGTGCAGCTTTATT+TGG | 0.153853 | 6.2:-50971649 | MS.gene27144:intron |
| ATGCAGCTTGGTTGGATAAA+AGG | 0.227929 | 6.2:+50974960 | None:intergenic |
| TTATCTTGTTGAACTTAAAA+AGG | 0.231865 | 6.2:-50975721 | MS.gene27144:CDS |
| CTCATTCATGCTACGTGATT+TGG | 0.272588 | 6.2:+50976715 | None:intergenic |
| TTCTGCTGATGATTGGTTGC+TGG | 0.277764 | 6.2:-50974108 | MS.gene27144:CDS |
| TTTCTGACGACCAAGCCTTT+TGG | 0.284842 | 6.2:-50972303 | MS.gene27144:CDS |
| ATTGCTATTAAGATGTTAAC+TGG | 0.296264 | 6.2:-50970742 | MS.gene27144:CDS |
| CTTTAGCTTCTGCTGATGAT+TGG | 0.309010 | 6.2:-50974115 | MS.gene27144:CDS |
| TATGTCCGAATCTTCGTTTC+CGG | 0.317633 | 6.2:+50974892 | None:intergenic |
| AGACCTGAATGGTTTCCTTC+TGG | 0.322733 | 6.2:-50972762 | MS.gene27144:CDS |
| ATTGATGCTGTTGCTGCTAC+AGG | 0.334893 | 6.2:-50971537 | MS.gene27144:CDS |
| GTGAATTCTCAAATGTATTT+GGG | 0.341029 | 6.2:-50972804 | MS.gene27144:CDS |
| ATCTCCGCGCGGCGAGTTGA+TGG | 0.344763 | 6.2:+50974614 | None:intergenic |
| CTTATCACTGAGAGTGAGAT+TGG | 0.350371 | 6.2:+50976787 | None:intergenic |
| AACCAAGCTGCATTGGTTCA+TGG | 0.370121 | 6.2:-50974950 | MS.gene27144:CDS |
| GACATTGAAAGAACTCCTTT+AGG | 0.380183 | 6.2:-50972277 | MS.gene27144:CDS |
| ATTCCAGAAGGAAACCATTC+AGG | 0.389508 | 6.2:+50972759 | None:intergenic |
| CAAATTCAACTCAATGGTTC+AGG | 0.391880 | 6.2:-50973985 | MS.gene27144:intron |
| TCACTCTCAGTGATAAGCTT+AGG | 0.406393 | 6.2:-50976781 | MS.gene27144:CDS |
| TGAAGTGCTCGAAACAAACT+TGG | 0.410187 | 6.2:+50974698 | None:intergenic |
| GAACTCATCTTCACAGTAGA+TGG | 0.412621 | 6.2:-50972837 | MS.gene27144:CDS |
| AGGTCCTCTTGGCCTTCAAC+AGG | 0.416523 | 6.2:-50972257 | MS.gene27144:intron |
| TTCTTCAGTTCACGCTGCTC+CGG | 0.416915 | 6.2:+50972918 | None:intergenic |
| TCCACTTGAAATCCTACAAT+TGG | 0.420645 | 6.2:-50973213 | MS.gene27144:CDS |
| CACTCTCAGTGATAAGCTTA+GGG | 0.423280 | 6.2:-50976780 | MS.gene27144:CDS |
| GTGCAAGTCCATCCAATTGT+AGG | 0.424062 | 6.2:+50973201 | None:intergenic |
| AGGCGAGAATCCGTTTCTTA+AGG | 0.426489 | 6.2:+50974318 | None:intergenic |
| GGCTGATCCGGTGGGACTAT+AGG | 0.432430 | 6.2:+50970687 | None:intergenic |
| ATTTGGGTATGGAGGAGAAA+GGG | 0.435406 | 6.2:-50972788 | MS.gene27144:CDS |
| TTACAGAAACAGTCATACTA+TGG | 0.437256 | 6.2:-50972327 | MS.gene27144:CDS |
| CTAATTACTCTGCCTTCATT+CGG | 0.439755 | 6.2:-50975665 | MS.gene27144:intron |
| TTCTCAAATGTATTTGGGTA+TGG | 0.441886 | 6.2:-50972799 | MS.gene27144:CDS |
| ACTACTAGGAAAAGCAATAC+TGG | 0.442061 | 6.2:-50974074 | MS.gene27144:CDS |
| AAACTAGAATAAGAAGAAAC+AGG | 0.443054 | 6.2:+50974044 | None:intergenic |
| GTTGGATAAAAGGTTTCTCA+TGG | 0.445565 | 6.2:+50974970 | None:intergenic |
| TGGCTTATGCACCAACTACT+AGG | 0.451092 | 6.2:-50974088 | MS.gene27144:CDS |
| AAACTTTCACATAGCACAAA+AGG | 0.453898 | 6.2:-50972984 | MS.gene27144:CDS |
| TTCAAGATCTGAAATCTCTC+TGG | 0.457261 | 6.2:+50975006 | None:intergenic |
| AGGGTGTCAACTTGGTTCCT+TGG | 0.459354 | 6.2:-50974918 | MS.gene27144:CDS |
| CTCGCCTCCATAGCTGCATC+AGG | 0.461895 | 6.2:-50974302 | MS.gene27144:CDS |
| TGGTTATGCGTGGGCTGATC+CGG | 0.466646 | 6.2:+50970675 | None:intergenic |
| TTGGATGGACTTGCACTAGA+AGG | 0.467374 | 6.2:-50973194 | MS.gene27144:CDS |
| CTTGATGAAACTGATCCTCT+TGG | 0.473506 | 6.2:+50976836 | None:intergenic |
| TCTCAGCTAATAGAACATCA+AGG | 0.478648 | 6.2:+50974801 | None:intergenic |
| TCTTTCAATGTCATCCCAAA+AGG | 0.478729 | 6.2:+50972288 | None:intergenic |
| TTTCGCTTCTCCTTAAGAAA+CGG | 0.479033 | 6.2:-50974328 | MS.gene27144:CDS |
| AGAACTCCTTTAGGTCCTCT+TGG | 0.479387 | 6.2:-50972268 | MS.gene27144:CDS |
| TTGGAAGCAACATAGGCATT+GGG | 0.479670 | 6.2:+50976734 | None:intergenic |
| TTTATCCAACCAAGCTGCAT+TGG | 0.482858 | 6.2:-50974957 | MS.gene27144:CDS |
| AGTAACACTCTACCTGTTGA+AGG | 0.484999 | 6.2:+50972245 | None:intergenic |
| CAATGTCATCCCAAAAGGCT+TGG | 0.489537 | 6.2:+50972293 | None:intergenic |
| TACATATATACGTACCTGTT+GGG | 0.490587 | 6.2:+50971507 | None:intergenic |
| TTTGGAAGCAACATAGGCAT+TGG | 0.491391 | 6.2:+50976733 | None:intergenic |
| TGCTCACAAATTCAACTCAA+TGG | 0.494222 | 6.2:-50973991 | MS.gene27144:CDS |
| ATACATCTGAGCTAGTAACT+TGG | 0.498432 | 6.2:-50974373 | MS.gene27144:CDS |
| CAACTTGGTTCCTTGGTGAC+CGG | 0.498514 | 6.2:-50974911 | MS.gene27144:CDS |
| TATTGCATCAGATGTATTTG+TGG | 0.499043 | 6.2:-50972386 | MS.gene27144:CDS |
| CTACAGGGCTAGATCCCAAC+AGG | 0.500114 | 6.2:-50971521 | MS.gene27144:intron |
| TTGGTTCATGGTTTAGCAGA+AGG | 0.500660 | 6.2:-50974938 | MS.gene27144:CDS |
| AGATCAAATCAAAATGTCAA+TGG | 0.501515 | 6.2:-50976879 | None:intergenic |
| GAAAAGAGTGGAAGAATCAA+TGG | 0.504829 | 6.2:-50974780 | MS.gene27144:CDS |
| TCAACAAACCACTCATCCTC+TGG | 0.505796 | 6.2:+50970775 | None:intergenic |
| ATCTGACGTTGCTTGCGAAA+TGG | 0.507358 | 6.2:+50974430 | None:intergenic |
| AAGACCTCCTGATGCAGCTA+TGG | 0.508161 | 6.2:+50974295 | None:intergenic |
| ATGAACCAATGCAGCTTGGT+TGG | 0.513222 | 6.2:+50974952 | None:intergenic |
| TTCAGTTCACGCTGCTCCGG+AGG | 0.517477 | 6.2:+50972921 | None:intergenic |
| ATTGCATCAGATGTATTTGT+GGG | 0.518591 | 6.2:-50972385 | MS.gene27144:CDS |
| TGAGCACTGATTGAAAGCTT+AGG | 0.519082 | 6.2:+50974008 | None:intergenic |
| TCAATGGCTGCTTTAGAAGA+AGG | 0.521248 | 6.2:-50974764 | MS.gene27144:CDS |
| TTCTCAGTGACAGCTGAACC+TGG | 0.521769 | 6.2:+50973122 | None:intergenic |
| TTTGGGTATGGAGGAGAAAG+GGG | 0.523161 | 6.2:-50972787 | MS.gene27144:CDS |
| GGATCAGTTTCATCAAGCAT+TGG | 0.525391 | 6.2:-50976830 | MS.gene27144:CDS |
| CTTGAAATCCTACAATTGGA+TGG | 0.527185 | 6.2:-50973209 | MS.gene27144:CDS |
| CTCAGCTAATAGAACATCAA+GGG | 0.528051 | 6.2:+50974802 | None:intergenic |
| ATCAGATGTATTTGTGGGAA+GGG | 0.529411 | 6.2:-50972380 | MS.gene27144:CDS |
| ATGTATTTGTGGGAAGGGAA+AGG | 0.531950 | 6.2:-50972375 | MS.gene27144:CDS |
| GGTGACCGGAAACGAAGATT+CGG | 0.536915 | 6.2:-50974897 | MS.gene27144:CDS |
| ACTAGCTCAGATGTATATGC+AGG | 0.540210 | 6.2:+50974380 | None:intergenic |
| ACGTGATTTGGAAGCAACAT+AGG | 0.541674 | 6.2:+50976727 | None:intergenic |
| GTAAGTGCTTGCTCAACAAA+TGG | 0.544583 | 6.2:+50974173 | None:intergenic |
| TTCATCTACATTGTCGAAGG+CGG | 0.545535 | 6.2:+50970714 | None:intergenic |
| TGGTTCATGGTTTAGCAGAA+GGG | 0.546446 | 6.2:-50974937 | MS.gene27144:CDS |
| CATCAGATGTATTTGTGGGA+AGG | 0.550806 | 6.2:-50972381 | MS.gene27144:CDS |
| AGAGAGATTTCAGATCTTGA+AGG | 0.551433 | 6.2:-50975004 | MS.gene27144:CDS |
| TACATTTGAGAATTCACAAG+TGG | 0.553060 | 6.2:+50972810 | None:intergenic |
| TTAGCAGAAGGGTGTCAACT+TGG | 0.553191 | 6.2:-50974926 | MS.gene27144:CDS |
| TGATGCAATAGTTGCCACTT+CGG | 0.553746 | 6.2:+50972399 | None:intergenic |
| TACATCTGAGCTAGTAACTT+GGG | 0.556125 | 6.2:-50974372 | MS.gene27144:CDS |
| AACCATGAACCAATGCAGCT+TGG | 0.558664 | 6.2:+50974948 | None:intergenic |
| TTATGCGTGGGCTGATCCGG+TGG | 0.558689 | 6.2:+50970678 | None:intergenic |
| TTGATGCTGTTGCTGCTACA+GGG | 0.559432 | 6.2:-50971536 | MS.gene27144:CDS |
| TCCAATTGTAGGATTTCAAG+TGG | 0.564153 | 6.2:+50973212 | None:intergenic |
| CTGTTAATAAATGCAATGCC+AGG | 0.567179 | 6.2:-50973140 | MS.gene27144:CDS |
| CACTGATTGAAAGCTTAGGC+TGG | 0.568514 | 6.2:+50974012 | None:intergenic |
| CCGCGCGGCGAGTTGATGGT+TGG | 0.570247 | 6.2:+50974618 | None:intergenic |
| GTAGCATACTCACCGAATGA+AGG | 0.577759 | 6.2:+50975653 | None:intergenic |
| TATGCGTGGGCTGATCCGGT+GGG | 0.579099 | 6.2:+50970679 | None:intergenic |
| TCAGACGATCAACTTCGCGC+TGG | 0.582613 | 6.2:+50972889 | None:intergenic |
| TTGATGACATTGGTTATGCG+TGG | 0.582645 | 6.2:+50970665 | None:intergenic |
| GTGTCTTGCCAGAGGATGAG+TGG | 0.583067 | 6.2:-50970783 | MS.gene27144:CDS |
| TGAAGGCCAAGAGGACCTAA+AGG | 0.583411 | 6.2:+50972262 | None:intergenic |
| CTAAAATGTTTAAGCAACAC+AGG | 0.586893 | 6.2:+50974197 | None:intergenic |
| TCAAATGTATTTGGGTATGG+AGG | 0.587560 | 6.2:-50972796 | MS.gene27144:CDS |
| ACCTCCTGATGCAGCTATGG+AGG | 0.589887 | 6.2:+50974298 | None:intergenic |
| GAAGATGCCTATAGTCCCAC+CGG | 0.590717 | 6.2:-50970694 | MS.gene27144:CDS |
| AGAAAGGGGAGAGACCTGAA+TGG | 0.592954 | 6.2:-50972773 | MS.gene27144:CDS |
| ATCTTCGTTTCCGGTCACCA+AGG | 0.593631 | 6.2:+50974901 | None:intergenic |
| AATAAGAAGAAACAGGAGGT+AGG | 0.594442 | 6.2:+50974051 | None:intergenic |
| ATCTTCATCTACATTGTCGA+AGG | 0.597950 | 6.2:+50970711 | None:intergenic |
| GATCCTCTTGGAGTTACGAA+TGG | 0.603593 | 6.2:+50976848 | None:intergenic |
| TGATGACATTGGTTATGCGT+GGG | 0.604763 | 6.2:+50970666 | None:intergenic |
| TATTTGGGTATGGAGGAGAA+AGG | 0.607896 | 6.2:-50972789 | MS.gene27144:CDS |
| AGTAGTAATGTATGAGCTCG+AGG | 0.612329 | 6.2:+50974551 | None:intergenic |
| ACACAACAGATAGCATTGCT+AGG | 0.617403 | 6.2:-50973053 | MS.gene27144:CDS |
| GCCTCCATAGCTGCATCAGG+AGG | 0.632896 | 6.2:-50974299 | MS.gene27144:CDS |
| TTGCTATTAAGATGTTAACT+GGG | 0.638875 | 6.2:-50970741 | MS.gene27144:CDS |
| TCTATTAGCTGAGAAAAGAG+TGG | 0.640906 | 6.2:-50974792 | MS.gene27144:CDS |
| ATCACGTAGCATGAATGAGA+AGG | 0.643265 | 6.2:-50976711 | MS.gene27144:intron |
| TTACCATTCGTAACTCCAAG+AGG | 0.643931 | 6.2:-50976851 | MS.gene27144:CDS |
| ACTGAGAATCTAGAAAGCAC+AGG | 0.644376 | 6.2:-50973107 | MS.gene27144:CDS |
| TGAATACAGTGTCTTGCCAG+AGG | 0.652440 | 6.2:-50970791 | MS.gene27144:intron |
| TCTACCTGTTGAAGGCCAAG+AGG | 0.664013 | 6.2:+50972253 | None:intergenic |
| CTAGAATAAGAAGAAACAGG+AGG | 0.679447 | 6.2:+50974047 | None:intergenic |
| CCAACCATCAACTCGCCGCG+CGG | 0.686918 | 6.2:-50974618 | MS.gene27144:CDS |
| ATGTCAAAAGAAATTACACA+AGG | 0.703811 | 6.2:-50974734 | MS.gene27144:CDS |
| AGTGTATGCACTAACTGTTG+TGG | 0.728646 | 6.2:+50974481 | None:intergenic |
| GAAAGTTTGATAACAGCACG+CGG | 0.743743 | 6.2:+50972999 | None:intergenic |
| CAGTTGATCGAATCTCCGCG+CGG | 0.822792 | 6.2:+50974603 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAAATTTGTATAGAAA+TGG | - | chr6.2:50971239-50971258 | MS.gene27144:intron | 10.0% |
| !!! | AAAGTACTATATTATTATTA+TGG | + | chr6.2:50973689-50973708 | None:intergenic | 10.0% |
| !!! | ATAACATAGAATTTTTAATA+GGG | + | chr6.2:50972366-50972385 | None:intergenic | 10.0% |
| !!! | TATAACATAGAATTTTTAAT+AGG | + | chr6.2:50972367-50972386 | None:intergenic | 10.0% |
| !! | TATATAGGTATTACATAAAA+TGG | + | chr6.2:50974273-50974292 | None:intergenic | 15.0% |
| !! | TATTAAAAACATTATTGGAA+GGG | - | chr6.2:50975982-50976001 | MS.gene27144:intron | 15.0% |
| !!! | AAAAATTTGAATCATGTTTT+AGG | - | chr6.2:50974017-50974036 | MS.gene27144:CDS | 15.0% |
| !!! | AACTATAGAGATTAATTTTT+TGG | - | chr6.2:50971135-50971154 | MS.gene27144:intron | 15.0% |
| !!! | GTAATAATTTTAGAAAATAG+AGG | + | chr6.2:50973812-50973831 | None:intergenic | 15.0% |
| !!! | TTAAAATTTTTATTCGATGT+TGG | + | chr6.2:50974238-50974257 | None:intergenic | 15.0% |
| !!! | TTCTATACAAATTTTATTTG+TGG | + | chr6.2:50971238-50971257 | None:intergenic | 15.0% |
| !!! | TTTATTTTTAATTGCAAAGT+TGG | + | chr6.2:50976629-50976648 | None:intergenic | 15.0% |
| !! | AAAAATACTTAGATATGTTC+TGG | - | chr6.2:50975698-50975717 | MS.gene27144:CDS | 20.0% |
| !! | AATGTTATGTAAAAATCTTG+AGG | + | chr6.2:50972112-50972131 | None:intergenic | 20.0% |
| !! | ATATATCCAATACAGAAAAA+TGG | - | chr6.2:50972700-50972719 | MS.gene27144:intron | 20.0% |
| !! | CAAGCTATTAAAAACATTAT+TGG | - | chr6.2:50975977-50975996 | MS.gene27144:intron | 20.0% |
| !! | CTATTAAAAACATTATTGGA+AGG | - | chr6.2:50975981-50976000 | MS.gene27144:intron | 20.0% |
| !! | TAATCAAATGAAAGCAAAAA+GGG | + | chr6.2:50971738-50971757 | None:intergenic | 20.0% |
| !! | TATACTACATAGAATTCAAA+AGG | + | chr6.2:50972071-50972090 | None:intergenic | 20.0% |
| !! | TTACATAACATTGGATATAA+TGG | - | chr6.2:50972120-50972139 | MS.gene27144:intron | 20.0% |
| !! | TTATCTTGTTGAACTTAAAA+AGG | - | chr6.2:50971823-50971842 | MS.gene27144:intron | 20.0% |
| !! | TTATTCTAGTCAAAAAGTAA+AGG | - | chr6.2:50971408-50971427 | MS.gene27144:intron | 20.0% |
| !!! | AAAAGAAATACAAAGTATTC+AGG | - | chr6.2:50972390-50972409 | MS.gene27144:CDS | 20.0% |
| !!! | AAACTTAAGTTTTTGTTGTT+TGG | + | chr6.2:50971353-50971372 | None:intergenic | 20.0% |
| !!! | AATTTTGTTGAAGAAATAAC+AGG | - | chr6.2:50975721-50975740 | MS.gene27144:CDS | 20.0% |
| !!! | AATTTTTCAGGTAAAAACAA+AGG | - | chr6.2:50974805-50974824 | MS.gene27144:CDS | 20.0% |
| !!! | AGACTTTATTTATTTTTCAG+CGG | - | chr6.2:50970997-50971016 | MS.gene27144:intron | 20.0% |
| !!! | ATAATCGAGGTTTTAAATAA+CGG | + | chr6.2:50972465-50972484 | None:intergenic | 20.0% |
| !!! | ATTAATTTTTTGGATTGGTT+AGG | - | chr6.2:50971145-50971164 | MS.gene27144:intron | 20.0% |
| !!! | TAGAGATTAATTTTTTGGAT+TGG | - | chr6.2:50971140-50971159 | MS.gene27144:intron | 20.0% |
| !!! | TCAAGATTTTTACATAACAT+TGG | - | chr6.2:50972111-50972130 | MS.gene27144:intron | 20.0% |
| !!! | TCATTGGTATTAATTTGAAA+AGG | - | chr6.2:50975012-50975031 | MS.gene27144:CDS | 20.0% |
| !!! | TTCAATTCTTTTCAAATTTG+TGG | + | chr6.2:50973396-50973415 | None:intergenic | 20.0% |
| !!! | TTTTTCCTTTGCAATAAATT+GGG | - | chr6.2:50971098-50971117 | MS.gene27144:intron | 20.0% |
| !!! | TTTTTTCCTTTGCAATAAAT+TGG | - | chr6.2:50971097-50971116 | MS.gene27144:intron | 20.0% |
| ! | AAACTAGAATAAGAAGAAAC+AGG | + | chr6.2:50973503-50973522 | None:intergenic | 25.0% |
| ! | AAGCAATATAAAACAACGAT+TGG | + | chr6.2:50976711-50976730 | None:intergenic | 25.0% |
| ! | AATACAGAAAAATGGCTAAT+AGG | - | chr6.2:50972708-50972727 | MS.gene27144:intron | 25.0% |
| ! | AATAGACAGATTTGATTCTT+TGG | + | chr6.2:50973991-50974010 | None:intergenic | 25.0% |
| ! | AATTAACATGATTGTAATCC+AGG | - | chr6.2:50972196-50972215 | MS.gene27144:intron | 25.0% |
| ! | ACAATGTGAAATTCTCAAAA+TGG | + | chr6.2:50971963-50971982 | None:intergenic | 25.0% |
| ! | ACATAGAATCAGAAATAACA+AGG | - | chr6.2:50974195-50974214 | MS.gene27144:CDS | 25.0% |
| ! | ACATTGTTATGTTCATAAGA+AGG | + | chr6.2:50972007-50972026 | None:intergenic | 25.0% |
| ! | AGGAAAAAAAAACATGTTCA+TGG | + | chr6.2:50971086-50971105 | None:intergenic | 25.0% |
| ! | AGGTATTACATAAAATGGAA+AGG | + | chr6.2:50974268-50974287 | None:intergenic | 25.0% |
| ! | ATGACCTCAAATTGATAAAA+GGG | - | chr6.2:50970921-50970940 | MS.gene27144:intron | 25.0% |
| ! | ATGTCAAAAGAAATTACACA+AGG | - | chr6.2:50972810-50972829 | MS.gene27144:CDS | 25.0% |
| ! | ATTCATATTGCATTGTTTAC+AGG | - | chr6.2:50971781-50971800 | MS.gene27144:intron | 25.0% |
| ! | CCATATCAACTAGAAATATT+AGG | - | chr6.2:50974055-50974074 | MS.gene27144:CDS | 25.0% |
| ! | CTAATCAAATGAAAGCAAAA+AGG | + | chr6.2:50971739-50971758 | None:intergenic | 25.0% |
| ! | CTGCATATTATCATAAATAG+AGG | - | chr6.2:50974153-50974172 | MS.gene27144:CDS | 25.0% |
| ! | CTTATGCATCATATATGAAA+GGG | - | chr6.2:50971925-50971944 | MS.gene27144:intron | 25.0% |
| ! | GAACTTGAAAGAAAAAATAG+TGG | + | chr6.2:50971517-50971536 | None:intergenic | 25.0% |
| ! | GGTATTACATAAAATGGAAA+GGG | + | chr6.2:50974267-50974286 | None:intergenic | 25.0% |
| ! | GTATTACATAAAATGGAAAG+GGG | + | chr6.2:50974266-50974285 | None:intergenic | 25.0% |
| ! | GTGAATTCTCAAATGTATTT+GGG | - | chr6.2:50974740-50974759 | MS.gene27144:CDS | 25.0% |
| ! | TATGATAATATGCAGAAACA+GGG | + | chr6.2:50974148-50974167 | None:intergenic | 25.0% |
| ! | TCTTATGCATCATATATGAA+AGG | - | chr6.2:50971924-50971943 | MS.gene27144:intron | 25.0% |
| ! | TGACATAAAAATTGAACACT+TGG | + | chr6.2:50974382-50974401 | None:intergenic | 25.0% |
| ! | TGTGAATTCTCAAATGTATT+TGG | - | chr6.2:50974739-50974758 | MS.gene27144:CDS | 25.0% |
| ! | TTATGATAATATGCAGAAAC+AGG | + | chr6.2:50974149-50974168 | None:intergenic | 25.0% |
| ! | TTGAATATAACTACATGTGT+TGG | + | chr6.2:50973786-50973805 | None:intergenic | 25.0% |
| ! | TTTGTAAAGAAAATCATGTC+TGG | - | chr6.2:50976562-50976581 | MS.gene27144:intron | 25.0% |
| !! | AATGTGTTAGATAGTGTTTT+GGG | - | chr6.2:50971702-50971721 | MS.gene27144:intron | 25.0% |
| !! | ATTGCTATTAAGATGTTAAC+TGG | - | chr6.2:50976802-50976821 | MS.gene27144:CDS | 25.0% |
| !! | CTTTAGCATTGAAAAATCTT+GGG | - | chr6.2:50972964-50972983 | MS.gene27144:CDS | 25.0% |
| !! | TCTGAAAGAATACTTTTGAA+CGG | - | chr6.2:50975387-50975406 | MS.gene27144:intron | 25.0% |
| !! | TTGCTATTAAGATGTTAACT+GGG | - | chr6.2:50976803-50976822 | MS.gene27144:CDS | 25.0% |
| !! | TTTAACATTGCTGCATTTTA+AGG | - | chr6.2:50971194-50971213 | MS.gene27144:intron | 25.0% |
| !! | TTTAGCATTGAAAAATCTTG+GGG | - | chr6.2:50972965-50972984 | MS.gene27144:CDS | 25.0% |
| !! | TTTTATATGTCTACCATATG+TGG | - | chr6.2:50971438-50971457 | MS.gene27144:intron | 25.0% |
| !! | TTTTCCTTTGCAATAAATTG+GGG | - | chr6.2:50971099-50971118 | MS.gene27144:intron | 25.0% |
| !!! | ACAAAACAACTATTTCTACA+TGG | - | chr6.2:50975783-50975802 | MS.gene27144:intron | 25.0% |
| !!! | ATAATTTGTGCAGCTTTATT+TGG | - | chr6.2:50975895-50975914 | MS.gene27144:intron | 25.0% |
| !!! | CCTAATATTTCTAGTTGATA+TGG | + | chr6.2:50974058-50974077 | None:intergenic | 25.0% |
| !!! | TAGTTGTTTTCAAAATGTTG+TGG | - | chr6.2:50971374-50971393 | MS.gene27144:intron | 25.0% |
| !!! | TATTAGCCATTTTTCTGTAT+TGG | + | chr6.2:50972709-50972728 | None:intergenic | 25.0% |
| !!! | TGGTTTAATGCATTGTTTTT+TGG | - | chr6.2:50975493-50975512 | MS.gene27144:intron | 25.0% |
| AAACCACAAACAAATGACTA+TGG | + | chr6.2:50975479-50975498 | None:intergenic | 30.0% | |
| AAACTTTCACATAGCACAAA+AGG | - | chr6.2:50974560-50974579 | MS.gene27144:CDS | 30.0% | |
| ACAAAACCAGTTTAATTCTC+AGG | + | chr6.2:50971623-50971642 | None:intergenic | 30.0% | |
| AGATTGCTCTCTCATATATT+AGG | - | chr6.2:50973955-50973974 | MS.gene27144:intron | 30.0% | |
| AGTCAAAAAGTAAAGGTTGA+AGG | - | chr6.2:50971415-50971434 | MS.gene27144:intron | 30.0% | |
| AGTGATTCTCTACAATATCA+TGG | + | chr6.2:50972247-50972266 | None:intergenic | 30.0% | |
| ATCAGATAAACAAAAACCTC+CGG | - | chr6.2:50974607-50974626 | MS.gene27144:CDS | 30.0% | |
| ATGACTTAAGTTTGCAATCT+TGG | + | chr6.2:50972343-50972362 | None:intergenic | 30.0% | |
| ATGTGATTGATTGTATCCAT+AGG | - | chr6.2:50975038-50975057 | MS.gene27144:intron | 30.0% | |
| ATTGCATCAGATGTATTTGT+GGG | - | chr6.2:50975159-50975178 | MS.gene27144:intron | 30.0% | |
| CAAACACTTTGATCAGATAT+CGG | + | chr6.2:50972030-50972049 | None:intergenic | 30.0% | |
| CAATTCCTATATGATTGTTC+AGG | - | chr6.2:50975104-50975123 | MS.gene27144:intron | 30.0% | |
| CATGACCTCAAATTGATAAA+AGG | - | chr6.2:50970920-50970939 | MS.gene27144:intron | 30.0% | |
| CTAAAATGTTTAAGCAACAC+AGG | + | chr6.2:50973350-50973369 | None:intergenic | 30.0% | |
| CTAACATGTGTCAGATAATA+AGG | - | chr6.2:50975076-50975095 | MS.gene27144:intron | 30.0% | |
| GACATAATATGAGAAGCAAA+TGG | - | chr6.2:50971470-50971489 | MS.gene27144:intron | 30.0% | |
| GTGACTAATCATAAGATCTA+AGG | + | chr6.2:50975840-50975859 | None:intergenic | 30.0% | |
| GTTGTAGATATTCATCTCAA+TGG | - | chr6.2:50971562-50971581 | MS.gene27144:CDS | 30.0% | |
| TACATATATACGTACCTGTT+GGG | + | chr6.2:50976040-50976059 | None:intergenic | 30.0% | |
| TACATTTGAGAATTCACAAG+TGG | + | chr6.2:50974737-50974756 | None:intergenic | 30.0% | |
| TAGAAATATTAGGCCTAATG+CGG | - | chr6.2:50974065-50974084 | MS.gene27144:CDS | 30.0% | |
| TAGATATTCATCTCAATGGA+AGG | - | chr6.2:50971566-50971585 | MS.gene27144:CDS | 30.0% | |
| TATATCCTTTGTGCGAATAT+AGG | - | chr6.2:50974289-50974308 | MS.gene27144:CDS | 30.0% | |
| TATTATGGAATACGTAGCAA+TGG | + | chr6.2:50973674-50973693 | None:intergenic | 30.0% | |
| TATTCGCACAAAGGATATAT+AGG | + | chr6.2:50974288-50974307 | None:intergenic | 30.0% | |
| TATTGCATCAGATGTATTTG+TGG | - | chr6.2:50975158-50975177 | MS.gene27144:intron | 30.0% | |
| TCAGTTGTAAACATAATCTC+TGG | - | chr6.2:50975555-50975574 | MS.gene27144:intron | 30.0% | |
| TCTTCAAACACAGACAATTA+TGG | + | chr6.2:50973646-50973665 | None:intergenic | 30.0% | |
| TGTACTGTACATAATATTGC+AGG | + | chr6.2:50972517-50972536 | None:intergenic | 30.0% | |
| TTAATAACGACGAAATTCTG+TGG | - | chr6.2:50975665-50975684 | MS.gene27144:intron | 30.0% | |
| TTACAGAAACAGTCATACTA+TGG | - | chr6.2:50975217-50975236 | MS.gene27144:intron | 30.0% | |
| TTCTCAAATGTATTTGGGTA+TGG | - | chr6.2:50974745-50974764 | MS.gene27144:CDS | 30.0% | |
| TTCTCGTATATGACAACAAT+AGG | + | chr6.2:50971301-50971320 | None:intergenic | 30.0% | |
| TTTACCTGAAAAATTCCAGA+AGG | + | chr6.2:50974800-50974819 | None:intergenic | 30.0% | |
| TTTCCATAGTCATTTGTTTG+TGG | - | chr6.2:50975473-50975492 | MS.gene27144:intron | 30.0% | |
| ! | CAATGTGTTAGATAGTGTTT+TGG | - | chr6.2:50971701-50971720 | MS.gene27144:intron | 30.0% |
| ! | GCTTTAGCATTGAAAAATCT+TGG | - | chr6.2:50972963-50972982 | MS.gene27144:CDS | 30.0% |
| ! | GTGATGATATTTTCATCTCA+AGG | - | chr6.2:50975929-50975948 | MS.gene27144:intron | 30.0% |
| ! | TAGACCCTTTTATCAATTTG+AGG | + | chr6.2:50970928-50970947 | None:intergenic | 30.0% |
| ! | TTGTTCAGGAGCTTTTTATA+AGG | - | chr6.2:50975118-50975137 | MS.gene27144:intron | 30.0% |
| ! | TTTTTGTCTGTGTTCAGTAA+TGG | + | chr6.2:50972877-50972896 | None:intergenic | 30.0% |
| !! | AGAAGACAAGTTCTAAACAA+TGG | - | chr6.2:50976603-50976622 | MS.gene27144:intron | 30.0% |
| !! | CTTTTATCAATTTGAGGTCA+TGG | + | chr6.2:50970922-50970941 | None:intergenic | 30.0% |
| !! | GTGAGTCTCATATTACTTTT+TGG | + | chr6.2:50975869-50975888 | None:intergenic | 30.0% |
| !! | TGAGAATACTTTTAGAAGTC+AGG | + | chr6.2:50975747-50975766 | None:intergenic | 30.0% |
| !! | TTTTAACTACCAATCCACAT+TGG | + | chr6.2:50976102-50976121 | None:intergenic | 30.0% |
| !!! | GTAATCCAGGTTTTAAATAG+TGG | - | chr6.2:50972209-50972228 | MS.gene27144:intron | 30.0% |
| !!! | TCATATTACTTTTTGGTGAG+TGG | + | chr6.2:50975862-50975881 | None:intergenic | 30.0% |
| AAATCACTGTCTCAACTGTA+AGG | + | chr6.2:50976191-50976210 | None:intergenic | 35.0% | |
| AAGCTCCTGAACAATCATAT+AGG | + | chr6.2:50975112-50975131 | None:intergenic | 35.0% | |
| AAGCTCTCAATCTGAATTGT+TGG | + | chr6.2:50973743-50973762 | None:intergenic | 35.0% | |
| AAGGATGTTTCATGCTTTCT+TGG | - | chr6.2:50974824-50974843 | MS.gene27144:CDS | 35.0% | |
| AATAAGAAGAAACAGGAGGT+AGG | + | chr6.2:50973496-50973515 | None:intergenic | 35.0% | |
| ACACATTGCATAAGAAGACA+TGG | + | chr6.2:50971689-50971708 | None:intergenic | 35.0% | |
| ACATAGAATTCAAAAGGTCG+TGG | + | chr6.2:50972065-50972084 | None:intergenic | 35.0% | |
| ACCAGTTTAATTCTCAGGAA+TGG | + | chr6.2:50971618-50971637 | None:intergenic | 35.0% | |
| ACTACTAGGAAAAGCAATAC+TGG | - | chr6.2:50973470-50973489 | MS.gene27144:intron | 35.0% | |
| AGAGAGATTTCAGATCTTGA+AGG | - | chr6.2:50972540-50972559 | MS.gene27144:intron | 35.0% | |
| AGCAATCGAAAACATAATCG+AGG | + | chr6.2:50972478-50972497 | None:intergenic | 35.0% | |
| AGGATGTTTCATGCTTTCTT+GGG | - | chr6.2:50974825-50974844 | MS.gene27144:CDS | 35.0% | |
| ATACATCTGAGCTAGTAACT+TGG | - | chr6.2:50973171-50973190 | MS.gene27144:CDS | 35.0% | |
| ATCAGATGTATTTGTGGGAA+GGG | - | chr6.2:50975164-50975183 | MS.gene27144:intron | 35.0% | |
| ATCATAAATAGAGGTGAGTG+TGG | - | chr6.2:50974162-50974181 | MS.gene27144:CDS | 35.0% | |
| ATCTTCATCTACATTGTCGA+AGG | + | chr6.2:50976836-50976855 | None:intergenic | 35.0% | |
| ATGACCAAGGAGTTACATTA+TGG | - | chr6.2:50972424-50972443 | MS.gene27144:intron | 35.0% | |
| CAAATTCAACTCAATGGTTC+AGG | - | chr6.2:50973559-50973578 | MS.gene27144:intron | 35.0% | |
| CACAGTCATTCTTGTCTTAT+CGG | + | chr6.2:50976327-50976346 | None:intergenic | 35.0% | |
| CAGTTTAATTCTCAGGAATG+GGG | + | chr6.2:50971616-50971635 | None:intergenic | 35.0% | |
| CATACCCCAATTTATTGCAA+AGG | + | chr6.2:50971106-50971125 | None:intergenic | 35.0% | |
| CCAGTTTAATTCTCAGGAAT+GGG | + | chr6.2:50971617-50971636 | None:intergenic | 35.0% | |
| CCTAAAATAGCATGTGTAGA+TGG | - | chr6.2:50976061-50976080 | MS.gene27144:intron | 35.0% | |
| CTAATTACTCTGCCTTCATT+CGG | - | chr6.2:50971879-50971898 | MS.gene27144:intron | 35.0% | |
| CTACATATATACGTACCTGT+TGG | + | chr6.2:50976041-50976060 | None:intergenic | 35.0% | |
| CTAGAATAAGAAGAAACAGG+AGG | + | chr6.2:50973500-50973519 | None:intergenic | 35.0% | |
| CTCAGCTAATAGAACATCAA+GGG | + | chr6.2:50972745-50972764 | None:intergenic | 35.0% | |
| CTGTTAATAAATGCAATGCC+AGG | - | chr6.2:50974404-50974423 | MS.gene27144:CDS | 35.0% | |
| CTTAAGTTTGCAATCTTGGT+CGG | + | chr6.2:50972339-50972358 | None:intergenic | 35.0% | |
| CTTGAAATCCTACAATTGGA+TGG | - | chr6.2:50974335-50974354 | MS.gene27144:CDS | 35.0% | |
| GAAAAGAGTGGAAGAATCAA+TGG | - | chr6.2:50972764-50972783 | MS.gene27144:CDS | 35.0% | |
| GACATTGAAAGAACTCCTTT+AGG | - | chr6.2:50975267-50975286 | MS.gene27144:intron | 35.0% | |
| GATACCATAATGTAACTCCT+TGG | + | chr6.2:50972431-50972450 | None:intergenic | 35.0% | |
| GCGAAATGGTTGAAAAAACA+AGG | + | chr6.2:50973103-50973122 | None:intergenic | 35.0% | |
| GTTGGATAAAAGGTTTCTCA+TGG | + | chr6.2:50972577-50972596 | None:intergenic | 35.0% | |
| TACATCTGAGCTAGTAACTT+GGG | - | chr6.2:50973172-50973191 | MS.gene27144:CDS | 35.0% | |
| TATACGAGAAGAGATTGTTG+CGG | - | chr6.2:50971311-50971330 | MS.gene27144:intron | 35.0% | |
| TCAAATGTATTTGGGTATGG+AGG | - | chr6.2:50974748-50974767 | MS.gene27144:CDS | 35.0% | |
| TCCAATTGTAGGATTTCAAG+TGG | + | chr6.2:50974335-50974354 | None:intergenic | 35.0% | |
| TCCACTTGAAATCCTACAAT+TGG | - | chr6.2:50974331-50974350 | MS.gene27144:CDS | 35.0% | |
| TCTATTAGCTGAGAAAAGAG+TGG | - | chr6.2:50972752-50972771 | MS.gene27144:CDS | 35.0% | |
| TCTCAGCTAATAGAACATCA+AGG | + | chr6.2:50972746-50972765 | None:intergenic | 35.0% | |
| TCTTTCAATGTCATCCCAAA+AGG | + | chr6.2:50975259-50975278 | None:intergenic | 35.0% | |
| TGCAATAAATTGGGGTATGT+TGG | - | chr6.2:50971107-50971126 | MS.gene27144:intron | 35.0% | |
| TGCTCACAAATTCAACTCAA+TGG | - | chr6.2:50973553-50973572 | MS.gene27144:intron | 35.0% | |
| TGTCTAACATCTACCACATA+TGG | + | chr6.2:50971454-50971473 | None:intergenic | 35.0% | |
| TTAAGTTTGCAATCTTGGTC+GGG | + | chr6.2:50972338-50972357 | None:intergenic | 35.0% | |
| TTGATTGTATCCATAGGCTT+TGG | - | chr6.2:50975044-50975063 | MS.gene27144:intron | 35.0% | |
| TTTCGCTTCTCCTTAAGAAA+CGG | - | chr6.2:50973216-50973235 | MS.gene27144:CDS | 35.0% | |
| ! | AACCTTGTACGAACGATTTT+TGG | - | chr6.2:50970972-50970991 | MS.gene27144:intron | 35.0% |
| ! | CAAGTTAAGTTGCTGATAAG+CGG | - | chr6.2:50975611-50975630 | MS.gene27144:intron | 35.0% |
| ! | CATGACCACTATTTAAAACC+TGG | + | chr6.2:50972217-50972236 | None:intergenic | 35.0% |
| ! | GATAAGCTTAGGGTTTTCAA+AGG | - | chr6.2:50970774-50970793 | MS.gene27144:CDS | 35.0% |
| ! | GATTCTTTGACAGTTTTTGC+TGG | - | chr6.2:50973134-50973153 | MS.gene27144:CDS | 35.0% |
| ! | TACACACTGTCATCTTTTAG+AGG | - | chr6.2:50973304-50973323 | MS.gene27144:intron | 35.0% |
| ! | TTCAAGATCTGAAATCTCTC+TGG | + | chr6.2:50972541-50972560 | None:intergenic | 35.0% |
| ! | TTTTATAAGGCTTACCGAAG+TGG | - | chr6.2:50975131-50975150 | MS.gene27144:intron | 35.0% |
| ! | TTTTCTTAGTGTTAACCCTC+CGG | + | chr6.2:50971058-50971077 | None:intergenic | 35.0% |
| !! | GTATTGCTTTTCCTAGTAGT+TGG | + | chr6.2:50973470-50973489 | None:intergenic | 35.0% |
| !! | TTTATTTTTCAGCGGAACTC+TGG | - | chr6.2:50971005-50971024 | MS.gene27144:intron | 35.0% |
| !!! | CATTCGTTTTCCCTTGTTTT+TGG | + | chr6.2:50976231-50976250 | None:intergenic | 35.0% |
| !!! | CCATCTACACATGCTATTTT+AGG | + | chr6.2:50976064-50976083 | None:intergenic | 35.0% |
| !!! | GTTTCCTTCTGGAATTTTTC+AGG | - | chr6.2:50974793-50974812 | MS.gene27144:CDS | 35.0% |
| AAGCTCCTATATTCGCACAA+AGG | + | chr6.2:50974297-50974316 | None:intergenic | 40.0% | |
| ACACAACAGATAGCATTGCT+AGG | - | chr6.2:50974491-50974510 | MS.gene27144:CDS | 40.0% | |
| ACAGGCACAAATATCAGACA+CGG | + | chr6.2:50973854-50973873 | None:intergenic | 40.0% | |
| ACTAGCTCAGATGTATATGC+AGG | + | chr6.2:50973167-50973186 | None:intergenic | 40.0% | |
| ACTGTAAGGATGAGAAGGAT+CGG | + | chr6.2:50976177-50976196 | None:intergenic | 40.0% | |
| ACTGTGAGCTTCTACTTCTA+AGG | - | chr6.2:50976341-50976360 | MS.gene27144:intron | 40.0% | |
| AGTAACACTCTACCTGTTGA+AGG | + | chr6.2:50975302-50975321 | None:intergenic | 40.0% | |
| AGTAGTAATGTATGAGCTCG+AGG | + | chr6.2:50972996-50973015 | None:intergenic | 40.0% | |
| AGTGTATGCACTAACTGTTG+TGG | + | chr6.2:50973066-50973085 | None:intergenic | 40.0% | |
| ATCACGTAGCATGAATGAGA+AGG | - | chr6.2:50970833-50970852 | MS.gene27144:intron | 40.0% | |
| ATGCAGCTTGGTTGGATAAA+AGG | + | chr6.2:50972587-50972606 | None:intergenic | 40.0% | |
| ATGTATTTGTGGGAAGGGAA+AGG | - | chr6.2:50975169-50975188 | MS.gene27144:intron | 40.0% | |
| ATTCAGATTGAGAGCTTGTC+CGG | - | chr6.2:50973746-50973765 | MS.gene27144:intron | 40.0% | |
| ATTCCAGAAGGAAACCATTC+AGG | + | chr6.2:50974788-50974807 | None:intergenic | 40.0% | |
| ATTTGGGTATGGAGGAGAAA+GGG | - | chr6.2:50974756-50974775 | MS.gene27144:CDS | 40.0% | |
| CACTCTCAGTGATAAGCTTA+GGG | - | chr6.2:50970764-50970783 | MS.gene27144:CDS | 40.0% | |
| CAGCTATGATCATGCATGTT+TGG | - | chr6.2:50976449-50976468 | MS.gene27144:intron | 40.0% | |
| CATAATCGGCCACAATACTA+TGG | + | chr6.2:50974103-50974122 | None:intergenic | 40.0% | |
| CATCAGATGTATTTGTGGGA+AGG | - | chr6.2:50975163-50975182 | MS.gene27144:intron | 40.0% | |
| CCCATTCCTGAGAATTAAAC+TGG | - | chr6.2:50971614-50971633 | MS.gene27144:CDS | 40.0% | |
| CGAGTTCACAAGTACATGTT+CGG | + | chr6.2:50975432-50975451 | None:intergenic | 40.0% | |
| CTCATTCATGCTACGTGATT+TGG | + | chr6.2:50970832-50970851 | None:intergenic | 40.0% | |
| CTTATCACTGAGAGTGAGAT+TGG | + | chr6.2:50970760-50970779 | None:intergenic | 40.0% | |
| CTTGATGAAACTGATCCTCT+TGG | + | chr6.2:50970711-50970730 | None:intergenic | 40.0% | |
| GAACTCATCTTCACAGTAGA+TGG | - | chr6.2:50974707-50974726 | MS.gene27144:CDS | 40.0% | |
| GAATTCAAAAGGTCGTGGAA+TGG | + | chr6.2:50972060-50972079 | None:intergenic | 40.0% | |
| GACAGTGATTTGATCAGTGT+CGG | - | chr6.2:50976200-50976219 | MS.gene27144:intron | 40.0% | |
| GACCAAAAATCGTTCGTACA+AGG | + | chr6.2:50970977-50970996 | None:intergenic | 40.0% | |
| GAGTACGTAGCAAAAAAGTG+AGG | + | chr6.2:50973624-50973643 | None:intergenic | 40.0% | |
| GCATTGAAAAATCTTGGGGA+CGG | - | chr6.2:50972969-50972988 | MS.gene27144:CDS | 40.0% | |
| GGAACATTCGAATATGACCA+AGG | - | chr6.2:50972411-50972430 | MS.gene27144:CDS | 40.0% | |
| GGAATGGGGATAACTTAACT+AGG | + | chr6.2:50971602-50971621 | None:intergenic | 40.0% | |
| GGAGGGTTAACACTAAGAAA+AGG | - | chr6.2:50971057-50971076 | MS.gene27144:intron | 40.0% | |
| GGATCAGTTTCATCAAGCAT+TGG | - | chr6.2:50970714-50970733 | MS.gene27144:CDS | 40.0% | |
| GTAAGTGCTTGCTCAACAAA+TGG | + | chr6.2:50973374-50973393 | None:intergenic | 40.0% | |
| TACGTAGCAAAAAAGTGAGG+AGG | + | chr6.2:50973621-50973640 | None:intergenic | 40.0% | |
| TATGTCCGAATCTTCGTTTC+CGG | + | chr6.2:50972655-50972674 | None:intergenic | 40.0% | |
| TATTTGGGTATGGAGGAGAA+AGG | - | chr6.2:50974755-50974774 | MS.gene27144:CDS | 40.0% | |
| TCACTCTCAGTGATAAGCTT+AGG | - | chr6.2:50970763-50970782 | MS.gene27144:CDS | 40.0% | |
| TCTCAACTGTAAGGATGAGA+AGG | + | chr6.2:50976182-50976201 | None:intergenic | 40.0% | |
| TGGTTCATGGTTTAGCAGAA+GGG | - | chr6.2:50972607-50972626 | MS.gene27144:intron | 40.0% | |
| TTACCATTCGTAACTCCAAG+AGG | - | chr6.2:50970693-50970712 | MS.gene27144:CDS | 40.0% | |
| TTCATCTACATTGTCGAAGG+CGG | + | chr6.2:50976833-50976852 | None:intergenic | 40.0% | |
| TTGGAAGCAACATAGGCATT+GGG | + | chr6.2:50970813-50970832 | None:intergenic | 40.0% | |
| TTGGTTCATGGTTTAGCAGA+AGG | - | chr6.2:50972606-50972625 | MS.gene27144:intron | 40.0% | |
| TTTATCCAACCAAGCTGCAT+TGG | - | chr6.2:50972587-50972606 | MS.gene27144:intron | 40.0% | |
| TTTGGAAGCAACATAGGCAT+TGG | + | chr6.2:50970814-50970833 | None:intergenic | 40.0% | |
| ! | ACGTGATTTGGAAGCAACAT+AGG | + | chr6.2:50970820-50970839 | None:intergenic | 40.0% |
| ! | ACTGAGAATCTAGAAAGCAC+AGG | - | chr6.2:50974437-50974456 | MS.gene27144:CDS | 40.0% |
| ! | ATTGTATCCATAGGCTTTGG+TGG | - | chr6.2:50975047-50975066 | MS.gene27144:intron | 40.0% |
| ! | CTTTAGCTTCTGCTGATGAT+TGG | - | chr6.2:50973429-50973448 | MS.gene27144:intron | 40.0% |
| ! | GAAAGTTTGATAACAGCACG+CGG | + | chr6.2:50974548-50974567 | None:intergenic | 40.0% |
| ! | GTAGAGTGGATCAACTTGTT+AGG | + | chr6.2:50976419-50976438 | None:intergenic | 40.0% |
| ! | GTCGGTTCAACCAAAAACAA+GGG | - | chr6.2:50976218-50976237 | MS.gene27144:intron | 40.0% |
| ! | TGAAGTGCTCGAAACAAACT+TGG | + | chr6.2:50972849-50972868 | None:intergenic | 40.0% |
| ! | TGATGCAATAGTTGCCACTT+CGG | + | chr6.2:50975148-50975167 | None:intergenic | 40.0% |
| !! | TCAACTTGTTAGGTGGTCTA+TGG | + | chr6.2:50976409-50976428 | None:intergenic | 40.0% |
| !! | TCAATGGCTGCTTTAGAAGA+AGG | - | chr6.2:50972780-50972799 | MS.gene27144:CDS | 40.0% |
| !! | TCTTTTAGAGGCTAGTGGAA+TGG | - | chr6.2:50973316-50973335 | MS.gene27144:intron | 40.0% |
| !! | TGAGCACTGATTGAAAGCTT+AGG | + | chr6.2:50973539-50973558 | None:intergenic | 40.0% |
| !! | TGTAGATGGCAAGTTGATAG+CGG | - | chr6.2:50976075-50976094 | MS.gene27144:intron | 40.0% |
| !! | TGTCATCTTTTAGAGGCTAG+TGG | - | chr6.2:50973311-50973330 | MS.gene27144:intron | 40.0% |
| !! | TGTCGGTTCAACCAAAAACA+AGG | - | chr6.2:50976217-50976236 | MS.gene27144:intron | 40.0% |
| AACCATGAACCAATGCAGCT+TGG | + | chr6.2:50972599-50972618 | None:intergenic | 45.0% | |
| AAGTTGCTGATAAGCGGACA+TGG | - | chr6.2:50975617-50975636 | MS.gene27144:intron | 45.0% | |
| AGAACTCCTTTAGGTCCTCT+TGG | - | chr6.2:50975276-50975295 | MS.gene27144:intron | 45.0% | |
| AGACCTGAATGGTTTCCTTC+TGG | - | chr6.2:50974782-50974801 | MS.gene27144:CDS | 45.0% | |
| AGCGGAACTCTGGATTACTA+GGG | - | chr6.2:50971015-50971034 | MS.gene27144:intron | 45.0% | |
| AGGCGAGAATCCGTTTCTTA+AGG | + | chr6.2:50973229-50973248 | None:intergenic | 45.0% | |
| ATCTGACGTTGCTTGCGAAA+TGG | + | chr6.2:50973117-50973136 | None:intergenic | 45.0% | |
| ATGAACCAATGCAGCTTGGT+TGG | + | chr6.2:50972595-50972614 | None:intergenic | 45.0% | |
| ATTGATGCTGTTGCTGCTAC+AGG | - | chr6.2:50976007-50976026 | MS.gene27144:intron | 45.0% | |
| CAATGTCATCCCAAAAGGCT+TGG | + | chr6.2:50975254-50975273 | None:intergenic | 45.0% | |
| CACCTAGAGGAAAAAGGCTT+GGG | + | chr6.2:50973901-50973920 | None:intergenic | 45.0% | |
| CGGACACAACCATAGTATTG+TGG | - | chr6.2:50974091-50974110 | MS.gene27144:CDS | 45.0% | |
| CGTAGCATGAATGAGAAGGT+CGG | - | chr6.2:50970837-50970856 | MS.gene27144:intron | 45.0% | |
| CGTTCGTACAAGGTTCATTG+AGG | + | chr6.2:50970967-50970986 | None:intergenic | 45.0% | |
| GAAACAGGGTCTCAAATTGC+AGG | + | chr6.2:50974134-50974153 | None:intergenic | 45.0% | |
| GATCCTCTTGGAGTTACGAA+TGG | + | chr6.2:50970699-50970718 | None:intergenic | 45.0% | |
| GTACTTGTGAACTCGTGTCA+CGG | - | chr6.2:50975437-50975456 | MS.gene27144:intron | 45.0% | |
| GTAGCATACTCACCGAATGA+AGG | + | chr6.2:50971894-50971913 | None:intergenic | 45.0% | |
| GTGCAAGTCCATCCAATTGT+AGG | + | chr6.2:50974346-50974365 | None:intergenic | 45.0% | |
| GTTGGTATCGTGTCAGATAC+CGG | + | chr6.2:50973768-50973787 | None:intergenic | 45.0% | |
| TACTTGTGAACTCGTGTCAC+GGG | - | chr6.2:50975438-50975457 | MS.gene27144:intron | 45.0% | |
| TATTAGGCCTAATGCGGTTG+CGG | - | chr6.2:50974071-50974090 | MS.gene27144:CDS | 45.0% | |
| TCAACAAACCACTCATCCTC+TGG | + | chr6.2:50976772-50976791 | None:intergenic | 45.0% | |
| TGAATACAGTGTCTTGCCAG+AGG | - | chr6.2:50976753-50976772 | MS.gene27144:CDS | 45.0% | |
| TGGCTTATGCACCAACTACT+AGG | - | chr6.2:50973456-50973475 | MS.gene27144:intron | 45.0% | |
| TGTGTCAGTTGAGATTGCAC+TGG | - | chr6.2:50972284-50972303 | MS.gene27144:CDS | 45.0% | |
| TTGATGCTGTTGCTGCTACA+GGG | - | chr6.2:50976008-50976027 | MS.gene27144:intron | 45.0% | |
| TTTGGGTATGGAGGAGAAAG+GGG | - | chr6.2:50974757-50974776 | MS.gene27144:CDS | 45.0% | |
| ! | CAAGCCTTTTTCCTCTAGGT+GGG | - | chr6.2:50973900-50973919 | MS.gene27144:intron | 45.0% |
| ! | CACTGATTGAAAGCTTAGGC+TGG | + | chr6.2:50973535-50973554 | None:intergenic | 45.0% |
| ! | CTTTTTCCTCTAGGTGGGAT+GGG | - | chr6.2:50973905-50973924 | MS.gene27144:intron | 45.0% |
| ! | GAAGGTCGGTTTCAATCTCT+TGG | - | chr6.2:50970851-50970870 | MS.gene27144:intron | 45.0% |
| ! | TTCTGACGACCAAGCCTTTT+GGG | - | chr6.2:50975242-50975261 | MS.gene27144:intron | 45.0% |
| ! | TTCTGCTGATGATTGGTTGC+TGG | - | chr6.2:50973436-50973455 | MS.gene27144:intron | 45.0% |
| ! | TTGGATGGACTTGCACTAGA+AGG | - | chr6.2:50974350-50974369 | MS.gene27144:CDS | 45.0% |
| ! | TTTCTGACGACCAAGCCTTT+TGG | - | chr6.2:50975241-50975260 | MS.gene27144:intron | 45.0% |
| !! | AACCAAGCTGCATTGGTTCA+TGG | - | chr6.2:50972594-50972613 | MS.gene27144:intron | 45.0% |
| !! | AAGTTGATAGCGGTCCAATG+TGG | - | chr6.2:50976085-50976104 | MS.gene27144:intron | 45.0% |
| !! | ATATCAGACACGGTACTGAC+AGG | + | chr6.2:50973844-50973863 | None:intergenic | 45.0% |
| !! | ATTCTACGAAGCACTGACAC+AGG | + | chr6.2:50973872-50973891 | None:intergenic | 45.0% |
| !! | CGGCACTGACATATAGTCAT+TGG | - | chr6.2:50974996-50975015 | MS.gene27144:CDS | 45.0% |
| !! | CGGTACTGACAGGTAAACAT+TGG | + | chr6.2:50973834-50973853 | None:intergenic | 45.0% |
| !! | GAGTGGATCAACTTGTTAGG+TGG | + | chr6.2:50976416-50976435 | None:intergenic | 45.0% |
| !! | GCGTCATTGATTCATGTAGC+AGG | + | chr6.2:50973932-50973951 | None:intergenic | 45.0% |
| !! | TAGGAGCTTTTTGAAGACGC+AGG | - | chr6.2:50974308-50974327 | MS.gene27144:CDS | 45.0% |
| !! | TTAGCAGAAGGGTGTCAACT+TGG | - | chr6.2:50972618-50972637 | MS.gene27144:intron | 45.0% |
| AAGACCTCCTGATGCAGCTA+TGG | + | chr6.2:50973252-50973271 | None:intergenic | 50.0% | |
| AGAAAGGGGAGAGACCTGAA+TGG | - | chr6.2:50974771-50974790 | MS.gene27144:CDS | 50.0% | |
| AGTGTTAACCCTCCGGTTTC+TGG | + | chr6.2:50971051-50971070 | None:intergenic | 50.0% | |
| ATCTTCGTTTCCGGTCACCA+AGG | + | chr6.2:50972646-50972665 | None:intergenic | 50.0% | |
| CAGCGGAACTCTGGATTACT+AGG | - | chr6.2:50971014-50971033 | MS.gene27144:intron | 50.0% | |
| CCACCTAGAGGAAAAAGGCT+TGG | + | chr6.2:50973902-50973921 | None:intergenic | 50.0% | |
| CCATCCCACCTAGAGGAAAA+AGG | + | chr6.2:50973907-50973926 | None:intergenic | 50.0% | |
| GAAGATGCCTATAGTCCCAC+CGG | - | chr6.2:50976850-50976869 | MS.gene27144:CDS | 50.0% | |
| GCAATCTTGGTCGGGAAATC+AGG | + | chr6.2:50972330-50972349 | None:intergenic | 50.0% | |
| GCATGATCATAGCTGCATGC+AGG | + | chr6.2:50976444-50976463 | None:intergenic | 50.0% | |
| GGTGACCGGAAACGAAGATT+CGG | - | chr6.2:50972647-50972666 | MS.gene27144:intron | 50.0% | |
| GGTTCCTTTCTCCCAGAAAC+CGG | - | chr6.2:50971036-50971055 | MS.gene27144:intron | 50.0% | |
| GTGTTAACCCTCCGGTTTCT+GGG | + | chr6.2:50971050-50971069 | None:intergenic | 50.0% | |
| TCTACCTGTTGAAGGCCAAG+AGG | + | chr6.2:50975294-50975313 | None:intergenic | 50.0% | |
| TGAAGGCCAAGAGGACCTAA+AGG | + | chr6.2:50975285-50975304 | None:intergenic | 50.0% | |
| TGCAGGCTGCGTCACATAAT+CGG | + | chr6.2:50974117-50974136 | None:intergenic | 50.0% | |
| TTCTCAGTGACAGCTGAACC+TGG | + | chr6.2:50974425-50974444 | None:intergenic | 50.0% | |
| TTCTTCAGTTCACGCTGCTC+CGG | + | chr6.2:50974629-50974648 | None:intergenic | 50.0% | |
| ! | AGGGTGTCAACTTGGTTCCT+TGG | - | chr6.2:50972626-50972645 | MS.gene27144:intron | 50.0% |
| ! | CAACTTGGTTCCTTGGTGAC+CGG | - | chr6.2:50972633-50972652 | MS.gene27144:intron | 50.0% |
| ! | CACCCAAGCCTTTTTCCTCT+AGG | - | chr6.2:50973896-50973915 | MS.gene27144:intron | 50.0% |
| ! | CCAAGCCTTTTTCCTCTAGG+TGG | - | chr6.2:50973899-50973918 | MS.gene27144:intron | 50.0% |
| ! | CCTTTTTCCTCTAGGTGGGA+TGG | - | chr6.2:50973904-50973923 | MS.gene27144:intron | 50.0% |
| ! | GATAGCGGTCCAATGTGGAT+TGG | - | chr6.2:50976090-50976109 | MS.gene27144:intron | 50.0% |
| ACCTCCTGATGCAGCTATGG+AGG | + | chr6.2:50973249-50973268 | None:intergenic | 55.0% | |
| CAGTTGATCGAATCTCCGCG+CGG | + | chr6.2:50972944-50972963 | None:intergenic | 55.0% | |
| CCTTTCTCCCAGAAACCGGA+GGG | - | chr6.2:50971040-50971059 | MS.gene27144:intron | 55.0% | |
| CTACAGGGCTAGATCCCAAC+AGG | - | chr6.2:50976023-50976042 | MS.gene27144:intron | 55.0% | |
| GCTGCATGCAGGTTGTAGAG+TGG | + | chr6.2:50976433-50976452 | None:intergenic | 55.0% | |
| GTGTCTGCCACCAAAGCCTA+TGG | + | chr6.2:50975057-50975076 | None:intergenic | 55.0% | |
| GTGTCTTGCCAGAGGATGAG+TGG | - | chr6.2:50976761-50976780 | MS.gene27144:CDS | 55.0% | |
| GTTGTGTCCGCAACCGCATT+AGG | + | chr6.2:50974081-50974100 | None:intergenic | 55.0% | |
| TCAGACGATCAACTTCGCGC+TGG | + | chr6.2:50974658-50974677 | None:intergenic | 55.0% | |
| TCCTTTCTCCCAGAAACCGG+AGG | - | chr6.2:50971039-50971058 | MS.gene27144:intron | 55.0% | |
| TTGTGAACTCGTGTCACGGG+TGG | - | chr6.2:50975441-50975460 | MS.gene27144:intron | 55.0% | |
| ! | AGGTCCTCTTGGCCTTCAAC+AGG | - | chr6.2:50975287-50975306 | MS.gene27144:intron | 55.0% |
| CTCGCCTCCATAGCTGCATC+AGG | - | chr6.2:50973242-50973261 | MS.gene27144:intron | 60.0% | |
| GCCTCCATAGCTGCATCAGG+AGG | - | chr6.2:50973245-50973264 | MS.gene27144:intron | 60.0% | |
| GGCTGATCCGGTGGGACTAT+AGG | + | chr6.2:50976860-50976879 | None:intergenic | 60.0% | |
| TTCAGTTCACGCTGCTCCGG+AGG | + | chr6.2:50974626-50974645 | None:intergenic | 60.0% | |
| ! | CCCTCCGGTTTCTGGGAGAA+AGG | + | chr6.2:50971043-50971062 | None:intergenic | 60.0% |
| ! | TATGCGTGGGCTGATCCGGT+GGG | + | chr6.2:50976868-50976887 | None:intergenic | 60.0% |
| ! | TTATGCGTGGGCTGATCCGG+TGG | + | chr6.2:50976869-50976888 | None:intergenic | 60.0% |
| CCAACCATCAACTCGCCGCG+CGG | - | chr6.2:50972926-50972945 | MS.gene27144:CDS | 65.0% | |
| GCAGGTCCCATCCCACCTAG+AGG | + | chr6.2:50973914-50973933 | None:intergenic | 65.0% | |
| ! | ATCTCCGCGCGGCGAGTTGA+TGG | + | chr6.2:50972933-50972952 | None:intergenic | 65.0% |
| !! | CCGCGCGGCGAGTTGATGGT+TGG | + | chr6.2:50972929-50972948 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 50970678 | 50976888 | 50970678 | ID=MS.gene27144 |
| chr6.2 | mRNA | 50970678 | 50976888 | 50970678 | ID=MS.gene27144.t1;Parent=MS.gene27144 |
| chr6.2 | exon | 50976712 | 50976888 | 50976712 | ID=MS.gene27144.t1.exon1;Parent=MS.gene27144.t1 |
| chr6.2 | CDS | 50976712 | 50976888 | 50976712 | ID=cds.MS.gene27144.t1;Parent=MS.gene27144.t1 |
| chr6.2 | exon | 50975666 | 50975763 | 50975666 | ID=MS.gene27144.t1.exon2;Parent=MS.gene27144.t1 |
| chr6.2 | CDS | 50975666 | 50975763 | 50975666 | ID=cds.MS.gene27144.t1;Parent=MS.gene27144.t1 |
| chr6.2 | exon | 50973986 | 50975033 | 50973986 | ID=MS.gene27144.t1.exon3;Parent=MS.gene27144.t1 |
| chr6.2 | CDS | 50973986 | 50975033 | 50973986 | ID=cds.MS.gene27144.t1;Parent=MS.gene27144.t1 |
| chr6.2 | exon | 50972752 | 50973255 | 50972752 | ID=MS.gene27144.t1.exon4;Parent=MS.gene27144.t1 |
| chr6.2 | CDS | 50972752 | 50973255 | 50972752 | ID=cds.MS.gene27144.t1;Parent=MS.gene27144.t1 |
| chr6.2 | exon | 50972258 | 50972440 | 50972258 | ID=MS.gene27144.t1.exon5;Parent=MS.gene27144.t1 |
| chr6.2 | CDS | 50972258 | 50972440 | 50972258 | ID=cds.MS.gene27144.t1;Parent=MS.gene27144.t1 |
| chr6.2 | exon | 50971522 | 50971658 | 50971522 | ID=MS.gene27144.t1.exon6;Parent=MS.gene27144.t1 |
| chr6.2 | CDS | 50971522 | 50971658 | 50971522 | ID=cds.MS.gene27144.t1;Parent=MS.gene27144.t1 |
| chr6.2 | exon | 50970678 | 50970804 | 50970678 | ID=MS.gene27144.t1.exon7;Parent=MS.gene27144.t1 |
| chr6.2 | CDS | 50970678 | 50970804 | 50970678 | ID=cds.MS.gene27144.t1;Parent=MS.gene27144.t1 |
| Gene Sequence |
| Protein sequence |
