Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27270.t1 | XP_003589339.1 | 97.7 | 746 | 15 | 1 | 1 | 746 | 1 | 744 | 0.00E+00 | 1530.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27270.t1 | Q9MAJ7 | 72.8 | 728 | 193 | 4 | 6 | 731 | 8 | 732 | 0.0e+00 | 1136.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27270.t1 | G7I5V0 | 97.7 | 746 | 15 | 1 | 1 | 746 | 1 | 744 | 0.0e+00 | 1530.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59424 | MS.gene27270 | PPI |
| MS.gene27270 | MS.gene010574 | PPI |
| MS.gene64717 | MS.gene27270 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27270.t1 | MTR_1g023120 | 97.721 | 746 | 15 | 1 | 1 | 746 | 1 | 744 | 0.0 | 1525 |
| MS.gene27270.t1 | MTR_1g023120 | 98.110 | 688 | 11 | 1 | 59 | 746 | 1 | 686 | 0.0 | 1413 |
| MS.gene27270.t1 | MTR_3g112370 | 79.456 | 735 | 142 | 5 | 1 | 732 | 1 | 729 | 0.0 | 1227 |
| MS.gene27270.t1 | MTR_5g021190 | 72.169 | 733 | 197 | 4 | 1 | 732 | 1 | 727 | 0.0 | 1122 |
| MS.gene27270.t1 | MTR_8g016230 | 64.980 | 751 | 244 | 10 | 8 | 747 | 4 | 746 | 0.0 | 996 |
| MS.gene27270.t1 | MTR_2g100110 | 64.973 | 728 | 242 | 8 | 28 | 747 | 27 | 749 | 0.0 | 969 |
| MS.gene27270.t1 | MTR_2g039120 | 62.466 | 730 | 265 | 6 | 1 | 728 | 3 | 725 | 0.0 | 967 |
| MS.gene27270.t1 | MTR_1g018200 | 63.083 | 707 | 254 | 6 | 25 | 728 | 27 | 729 | 0.0 | 950 |
| MS.gene27270.t1 | MTR_2g039120 | 62.267 | 697 | 254 | 6 | 1 | 695 | 3 | 692 | 0.0 | 920 |
| MS.gene27270.t1 | MTR_2g094020 | 54.631 | 745 | 293 | 9 | 9 | 732 | 7 | 727 | 0.0 | 831 |
| MS.gene27270.t1 | MTR_2g094060 | 55.163 | 736 | 299 | 10 | 9 | 732 | 7 | 723 | 0.0 | 826 |
| MS.gene27270.t1 | MTR_2g094060 | 55.163 | 736 | 299 | 10 | 9 | 732 | 7 | 723 | 0.0 | 825 |
| MS.gene27270.t1 | MTR_2g039120 | 61.234 | 632 | 237 | 5 | 1 | 631 | 3 | 627 | 0.0 | 816 |
| MS.gene27270.t1 | MTR_4g059680 | 55.285 | 738 | 300 | 12 | 9 | 732 | 8 | 729 | 0.0 | 805 |
| MS.gene27270.t1 | MTR_2g100110 | 66.960 | 569 | 181 | 5 | 25 | 590 | 24 | 588 | 0.0 | 800 |
| MS.gene27270.t1 | MTR_2g094060 | 55.524 | 697 | 279 | 10 | 9 | 693 | 7 | 684 | 0.0 | 785 |
| MS.gene27270.t1 | MTR_2g039120 | 62.437 | 591 | 215 | 4 | 1 | 590 | 3 | 587 | 0.0 | 781 |
| MS.gene27270.t1 | MTR_3g096900 | 51.495 | 736 | 336 | 10 | 13 | 736 | 14 | 740 | 0.0 | 765 |
| MS.gene27270.t1 | MTR_8g085210 | 50.476 | 735 | 318 | 10 | 28 | 725 | 49 | 774 | 0.0 | 733 |
| MS.gene27270.t1 | MTR_3g096900 | 50.935 | 695 | 321 | 9 | 13 | 695 | 14 | 700 | 0.0 | 714 |
| MS.gene27270.t1 | MTR_2g042610 | 46.900 | 742 | 370 | 11 | 6 | 730 | 2 | 736 | 0.0 | 691 |
| MS.gene27270.t1 | MTR_3g088520 | 50.071 | 703 | 308 | 12 | 27 | 725 | 24 | 687 | 0.0 | 674 |
| MS.gene27270.t1 | MTR_5g024080 | 48.028 | 710 | 347 | 10 | 29 | 725 | 10 | 710 | 0.0 | 672 |
| MS.gene27270.t1 | MTR_5g025830 | 47.486 | 716 | 353 | 12 | 29 | 732 | 28 | 732 | 0.0 | 668 |
| MS.gene27270.t1 | MTR_3g096910 | 48.575 | 702 | 326 | 10 | 29 | 725 | 27 | 698 | 0.0 | 662 |
| MS.gene27270.t1 | MTR_3g005570 | 45.938 | 714 | 362 | 12 | 3 | 703 | 2 | 704 | 0.0 | 643 |
| MS.gene27270.t1 | MTR_3g096900 | 51.369 | 621 | 286 | 7 | 13 | 625 | 14 | 626 | 0.0 | 642 |
| MS.gene27270.t1 | MTR_4g073290 | 44.932 | 730 | 360 | 12 | 10 | 726 | 3 | 703 | 0.0 | 638 |
| MS.gene27270.t1 | MTR_3g117840 | 45.467 | 706 | 346 | 13 | 28 | 726 | 34 | 707 | 0.0 | 636 |
| MS.gene27270.t1 | MTR_3g088520 | 49.329 | 671 | 297 | 12 | 59 | 725 | 1 | 632 | 0.0 | 627 |
| MS.gene27270.t1 | MTR_3g096910 | 44.118 | 578 | 288 | 10 | 153 | 725 | 1 | 548 | 6.77e-161 | 478 |
| MS.gene27270.t1 | MTR_4g126330 | 38.015 | 413 | 156 | 6 | 284 | 695 | 131 | 444 | 2.98e-79 | 261 |
| MS.gene27270.t1 | MTR_4g126330 | 81.522 | 92 | 17 | 0 | 84 | 175 | 25 | 116 | 2.95e-44 | 166 |
| MS.gene27270.t1 | MTR_5g022590 | 42.357 | 314 | 142 | 7 | 48 | 359 | 11 | 287 | 7.54e-72 | 240 |
| MS.gene27270.t1 | MTR_2g100000 | 33.148 | 359 | 186 | 11 | 39 | 361 | 64 | 404 | 2.36e-36 | 146 |
| MS.gene27270.t1 | MTR_3g005610 | 30.556 | 288 | 162 | 8 | 435 | 717 | 26 | 280 | 6.61e-33 | 129 |
| MS.gene27270.t1 | MTR_2g059440 | 30.903 | 288 | 160 | 10 | 435 | 717 | 26 | 279 | 4.06e-31 | 124 |
| MS.gene27270.t1 | MTR_2g059430 | 28.309 | 272 | 131 | 8 | 446 | 717 | 4 | 211 | 4.68e-22 | 96.3 |
| MS.gene27270.t1 | MTR_2g100000 | 31.206 | 282 | 142 | 11 | 115 | 361 | 2 | 266 | 6.61e-17 | 85.1 |
| MS.gene27270.t1 | MTR_8g076800 | 59.259 | 54 | 22 | 0 | 147 | 200 | 6 | 59 | 4.53e-12 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27270.t1 | AT1G45130 | 72.802 | 728 | 193 | 4 | 6 | 731 | 8 | 732 | 0.0 | 1135 |
| MS.gene27270.t1 | AT4G36360 | 70.055 | 728 | 215 | 2 | 4 | 730 | 8 | 733 | 0.0 | 1111 |
| MS.gene27270.t1 | AT4G36360 | 70.055 | 728 | 215 | 2 | 4 | 730 | 8 | 733 | 0.0 | 1110 |
| MS.gene27270.t1 | AT1G45130 | 72.586 | 642 | 173 | 2 | 91 | 731 | 14 | 653 | 0.0 | 1002 |
| MS.gene27270.t1 | AT3G13750 | 64.891 | 732 | 242 | 8 | 5 | 732 | 16 | 736 | 0.0 | 985 |
| MS.gene27270.t1 | AT4G26140 | 62.794 | 723 | 257 | 8 | 9 | 728 | 12 | 725 | 0.0 | 959 |
| MS.gene27270.t1 | AT3G52840 | 63.010 | 711 | 254 | 6 | 22 | 728 | 73 | 778 | 0.0 | 953 |
| MS.gene27270.t1 | AT3G52840 | 63.010 | 711 | 254 | 6 | 22 | 728 | 19 | 724 | 0.0 | 952 |
| MS.gene27270.t1 | AT4G26140 | 60.858 | 746 | 259 | 8 | 9 | 728 | 12 | 750 | 0.0 | 949 |
| MS.gene27270.t1 | AT5G56870 | 60.905 | 729 | 278 | 6 | 1 | 728 | 1 | 723 | 0.0 | 924 |
| MS.gene27270.t1 | AT4G26140 | 60.028 | 713 | 252 | 8 | 9 | 695 | 12 | 717 | 0.0 | 897 |
| MS.gene27270.t1 | AT2G28470 | 57.003 | 714 | 285 | 9 | 28 | 728 | 31 | 735 | 0.0 | 833 |
| MS.gene27270.t1 | AT2G28470 | 57.003 | 714 | 285 | 9 | 28 | 728 | 31 | 735 | 0.0 | 833 |
| MS.gene27270.t1 | AT2G28470 | 57.003 | 714 | 285 | 9 | 28 | 728 | 25 | 729 | 0.0 | 832 |
| MS.gene27270.t1 | AT2G28470 | 57.003 | 714 | 285 | 9 | 28 | 728 | 25 | 729 | 0.0 | 832 |
| MS.gene27270.t1 | AT4G26140 | 62.319 | 621 | 225 | 6 | 9 | 629 | 12 | 623 | 0.0 | 818 |
| MS.gene27270.t1 | AT4G26140 | 62.319 | 621 | 225 | 6 | 9 | 629 | 12 | 623 | 0.0 | 818 |
| MS.gene27270.t1 | AT4G26140 | 62.279 | 623 | 224 | 7 | 9 | 629 | 12 | 625 | 0.0 | 816 |
| MS.gene27270.t1 | AT2G28470 | 56.912 | 680 | 271 | 9 | 27 | 693 | 30 | 700 | 0.0 | 784 |
| MS.gene27270.t1 | AT5G63810 | 49.595 | 740 | 358 | 7 | 1 | 730 | 4 | 738 | 0.0 | 765 |
| MS.gene27270.t1 | AT2G32810 | 49.867 | 750 | 337 | 10 | 6 | 725 | 15 | 755 | 0.0 | 756 |
| MS.gene27270.t1 | AT2G32810 | 49.867 | 750 | 337 | 10 | 6 | 725 | 15 | 755 | 0.0 | 755 |
| MS.gene27270.t1 | AT4G26140 | 64.621 | 554 | 186 | 6 | 9 | 560 | 12 | 557 | 0.0 | 745 |
| MS.gene27270.t1 | AT4G26140 | 62.045 | 577 | 188 | 6 | 9 | 560 | 12 | 582 | 0.0 | 735 |
| MS.gene27270.t1 | AT4G26140 | 62.045 | 577 | 188 | 6 | 9 | 560 | 12 | 582 | 0.0 | 735 |
| MS.gene27270.t1 | AT5G20710 | 48.383 | 742 | 366 | 10 | 1 | 732 | 1 | 735 | 0.0 | 707 |
| MS.gene27270.t1 | AT1G77410 | 48.138 | 725 | 328 | 17 | 9 | 725 | 8 | 692 | 0.0 | 655 |
| MS.gene27270.t1 | AT5G63800 | 47.347 | 735 | 333 | 15 | 6 | 725 | 7 | 702 | 0.0 | 653 |
| MS.gene27270.t1 | AT1G77410 | 47.808 | 730 | 328 | 18 | 9 | 725 | 8 | 697 | 0.0 | 649 |
| MS.gene27270.t1 | AT1G31740 | 45.804 | 703 | 323 | 10 | 29 | 720 | 22 | 677 | 0.0 | 642 |
| MS.gene27270.t1 | AT2G16730 | 45.637 | 699 | 336 | 11 | 28 | 715 | 43 | 708 | 0.0 | 622 |
| MS.gene27270.t1 | AT4G35010 | 44.892 | 695 | 347 | 11 | 28 | 715 | 40 | 705 | 0.0 | 605 |
| MS.gene27270.t1 | AT4G38590 | 43.946 | 669 | 336 | 13 | 59 | 718 | 1 | 639 | 0.0 | 550 |
| MS.gene27270.t1 | AT4G38590 | 43.239 | 673 | 339 | 14 | 55 | 718 | 65 | 703 | 1.44e-177 | 536 |
| MS.gene27270.t1 | AT1G77410 | 46.942 | 605 | 276 | 16 | 129 | 725 | 19 | 586 | 9.17e-174 | 516 |
| MS.gene27270.t1 | AT1G77410 | 46.942 | 605 | 276 | 16 | 129 | 725 | 19 | 586 | 9.17e-174 | 516 |
| MS.gene27270.t1 | AT5G20710 | 43.470 | 536 | 287 | 9 | 207 | 732 | 1 | 530 | 7.72e-152 | 456 |
| MS.gene27270.t1 | AT2G04060 | 32.703 | 370 | 171 | 9 | 294 | 662 | 23 | 315 | 2.28e-51 | 186 |
| MS.gene27270.t1 | AT1G72990 | 34.943 | 352 | 190 | 10 | 39 | 360 | 18 | 360 | 2.13e-44 | 170 |
| MS.gene27270.t1 | AT1G72990 | 34.943 | 352 | 190 | 10 | 39 | 360 | 73 | 415 | 3.12e-44 | 170 |
| MS.gene27270.t1 | AT1G72990 | 34.943 | 352 | 190 | 10 | 39 | 360 | 73 | 415 | 3.12e-44 | 170 |
| MS.gene27270.t1 | AT1G72990 | 33.724 | 341 | 187 | 10 | 50 | 360 | 22 | 353 | 8.24e-39 | 153 |
| MS.gene27270.t1 | AT2G04062 | 41.279 | 172 | 80 | 2 | 29 | 200 | 7 | 157 | 1.12e-34 | 129 |
Find 180 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTACTTGTGAAAGAATTAT+TGG | 0.133829 | 1.1:+1518819 | None:intergenic |
| TTCTTCTCTATCTTCTTTCT+TGG | 0.154990 | 1.1:-1519718 | MS.gene27270:CDS |
| TTTAGGCTTGTATGGTTTAT+TGG | 0.180144 | 1.1:+1518274 | None:intergenic |
| CTGACTTCCATGATTCAAAA+TGG | 0.224983 | 1.1:+1516426 | None:intergenic |
| AATTACAAATCAACCTTAAA+AGG | 0.254271 | 1.1:+1519009 | None:intergenic |
| CACAAACAGGTTGGCCTAAA+GGG | 0.278304 | 1.1:-1516218 | MS.gene27270:intron |
| CAGGCATATGTATTCTCTTC+AGG | 0.280229 | 1.1:-1517545 | MS.gene27270:CDS |
| TCCTTCAAATGACCATATTT+AGG | 0.289683 | 1.1:+1517722 | None:intergenic |
| TCAAGACCATGAAGCAAAAT+TGG | 0.291254 | 1.1:+1516392 | None:intergenic |
| GGAAGAGCACTTGGAGCTTC+TGG | 0.302471 | 1.1:-1518642 | MS.gene27270:CDS |
| AATCACAGCTTCTAGACTTC+TGG | 0.310113 | 1.1:-1517180 | MS.gene27270:CDS |
| CTGGTCATGCATACTCAAAC+TGG | 0.311005 | 1.1:-1518623 | MS.gene27270:CDS |
| CAAGAGTAACCTTCAATAAT+AGG | 0.311719 | 1.1:-1517475 | MS.gene27270:CDS |
| TTATTGATACTTATGTGTTT+TGG | 0.314153 | 1.1:-1519447 | MS.gene27270:CDS |
| TTAGGCTTGTATGGTTTATT+GGG | 0.316421 | 1.1:+1518275 | None:intergenic |
| GTTGTATTAGTCATTAAATT+TGG | 0.316432 | 1.1:+1515588 | None:intergenic |
| CGAGATCCTGCACTGGTCGC+TGG | 0.327311 | 1.1:+1518080 | None:intergenic |
| GGCTAACTCACCACTGGATC+TGG | 0.328635 | 1.1:+1518534 | None:intergenic |
| GACAGAAGTTTCACATTTAA+CGG | 0.332873 | 1.1:-1516610 | MS.gene27270:CDS |
| GATCCTACTGTTACATCATT+AGG | 0.334094 | 1.1:-1517653 | MS.gene27270:CDS |
| TATACTTCAGGGGTGCTTCT+TGG | 0.336445 | 1.1:+1519601 | None:intergenic |
| TAGAATTGCTAGGCAACATT+TGG | 0.341066 | 1.1:+1517261 | None:intergenic |
| TTGTAGATTGAGAATGAGTA+TGG | 0.341574 | 1.1:-1518672 | MS.gene27270:intron |
| GTTTGGTTGAAGTATGTTCC+TGG | 0.342045 | 1.1:-1519057 | MS.gene27270:CDS |
| GTCCATAGTTTAGGCTTGTA+TGG | 0.356806 | 1.1:+1518266 | None:intergenic |
| GGCATTGGACATGAGCAGTA+TGG | 0.356871 | 1.1:-1515973 | MS.gene27270:CDS |
| CACTAACCATATTCATCAAT+TGG | 0.357740 | 1.1:+1517835 | None:intergenic |
| AAATTTGGTTTACTAGATCT+TGG | 0.359025 | 1.1:+1515603 | None:intergenic |
| CTTTATGTACATCTTAGAAT+TGG | 0.367311 | 1.1:-1519218 | MS.gene27270:CDS |
| TTGTTAAGAGAACCTAAATA+TGG | 0.367945 | 1.1:-1517734 | MS.gene27270:CDS |
| GACAAAGCATAGGAAGATAT+TGG | 0.368369 | 1.1:-1515926 | MS.gene27270:CDS |
| CAAGCAATGTGAACATGCTT+TGG | 0.368637 | 1.1:-1517684 | MS.gene27270:CDS |
| TAAGTATCCTCCCTGATTGT+AGG | 0.369275 | 1.1:-1517427 | MS.gene27270:CDS |
| TGTGTAGAGGATTTCCTGTT+TGG | 0.373160 | 1.1:-1519074 | MS.gene27270:intron |
| GATGCTCCAATTGATGAATA+TGG | 0.376118 | 1.1:-1517841 | MS.gene27270:intron |
| AACCATACAAGCCTAAACTA+TGG | 0.381218 | 1.1:-1518268 | MS.gene27270:CDS |
| ACTAATTTCGGACGATCGGC+TGG | 0.381654 | 1.1:-1517895 | MS.gene27270:CDS |
| AATACATCTGTCCTACAATC+AGG | 0.390545 | 1.1:+1517416 | None:intergenic |
| AGCAAACTATCATTCGAATT+CGG | 0.392194 | 1.1:-1517501 | MS.gene27270:CDS |
| AAGAATTAGGAGGGAATCCT+TGG | 0.392838 | 1.1:-1515659 | MS.gene27270:CDS |
| ACAATCAGGGAGGATACTTA+TGG | 0.396888 | 1.1:+1517430 | None:intergenic |
| GATTAGGTACAGGTGTCCCT+TGG | 0.398070 | 1.1:-1518581 | MS.gene27270:CDS |
| ATCAGTTTCAGAACAGATAA+TGG | 0.399070 | 1.1:-1519033 | MS.gene27270:CDS |
| AGTTGCTCGTTTCATACAAA+AGG | 0.399519 | 1.1:-1518050 | MS.gene27270:CDS |
| GAGATACTAGTGACTATCTA+TGG | 0.403562 | 1.1:-1517139 | MS.gene27270:CDS |
| GCAATTCTAAGTTGTTATCA+TGG | 0.405026 | 1.1:-1517247 | MS.gene27270:CDS |
| CTCCAAGTGCTCTTCCTTGT+GGG | 0.408569 | 1.1:+1518649 | None:intergenic |
| GTATGGGAAAGGGTCAAGTA+TGG | 0.409540 | 1.1:-1515956 | MS.gene27270:CDS |
| GAGATCCTGCACTGGTCGCT+GGG | 0.413012 | 1.1:+1518081 | None:intergenic |
| ACTACCATCAAGTTGTTTGT+TGG | 0.414792 | 1.1:+1515687 | None:intergenic |
| TACCACGGAGGAACTAATTT+CGG | 0.421462 | 1.1:-1517907 | MS.gene27270:CDS |
| GTCATAGTGCCTATTATTGA+AGG | 0.422552 | 1.1:+1517466 | None:intergenic |
| AAAACCAGCCACAGTTGAAA+TGG | 0.423005 | 1.1:-1516124 | MS.gene27270:CDS |
| CAGAGATGAGGATTCTCCTT+TGG | 0.426691 | 1.1:+1519638 | None:intergenic |
| TATTGGATGGTTTATGCAAA+GGG | 0.430224 | 1.1:-1515909 | MS.gene27270:CDS |
| GTTTGTGCTGAGTGGAACTT+TGG | 0.434468 | 1.1:-1519188 | MS.gene27270:CDS |
| GAATCCTTGGAAAATATCTC+TGG | 0.443768 | 1.1:-1515646 | MS.gene27270:CDS |
| ATGGAGTCTCATCTGTTGAT+TGG | 0.444222 | 1.1:-1516169 | MS.gene27270:CDS |
| TGTGCCATTTCAACTGTGGC+TGG | 0.453005 | 1.1:+1516120 | None:intergenic |
| CTGTCAAATCCTTCTGTCCA+TGG | 0.453029 | 1.1:+1516369 | None:intergenic |
| GGCACTATGACTTGCCTCCT+TGG | 0.459047 | 1.1:-1517454 | MS.gene27270:CDS |
| CATGACTCAGTCCATAGTTT+AGG | 0.461041 | 1.1:+1518257 | None:intergenic |
| ATTGCTTGATAGCTTTATGA+AGG | 0.461553 | 1.1:+1517699 | None:intergenic |
| CGAAGATACATCTTCATCAT+AGG | 0.461768 | 1.1:+1517220 | None:intergenic |
| GCACTTCTTAGTGTAGCTGT+TGG | 0.465181 | 1.1:-1516553 | MS.gene27270:CDS |
| GGAACATACTTCAACCAAAC+AGG | 0.465558 | 1.1:+1519060 | None:intergenic |
| TTCCAGAATAATACATTGCC+AGG | 0.466558 | 1.1:+1519406 | None:intergenic |
| AGCATTAGTGTGCATTCCTC+TGG | 0.470893 | 1.1:-1516911 | MS.gene27270:CDS |
| GCCAATGGTTCAACTCCATC+AGG | 0.472547 | 1.1:+1515993 | None:intergenic |
| AAAACCAACAAACAACTTGA+TGG | 0.473330 | 1.1:-1515691 | MS.gene27270:CDS |
| ATTAGGTACAGGTGTCCCTT+GGG | 0.473811 | 1.1:-1518580 | MS.gene27270:CDS |
| AGAAAAGCTATTATCATCAA+TGG | 0.476920 | 1.1:-1519661 | MS.gene27270:CDS |
| GAATAGTAACAGAAGAAGCT+TGG | 0.477596 | 1.1:+1519738 | None:intergenic |
| GGAAAATATCTCTGGTAAAG+AGG | 0.478631 | 1.1:-1515638 | MS.gene27270:CDS |
| AATGTTCATGAACCTTCTCC+TGG | 0.479007 | 1.1:-1519424 | MS.gene27270:CDS |
| ATCATTAGGAGCATATGAAC+AGG | 0.480489 | 1.1:-1517639 | MS.gene27270:intron |
| GCTCCAAGTGCTCTTCCTTG+TGG | 0.484823 | 1.1:+1518648 | None:intergenic |
| AAGAAGCTTGGAAACTGAGT+TGG | 0.489457 | 1.1:+1519750 | None:intergenic |
| CAAAGGAGAATCCTCATCTC+TGG | 0.492293 | 1.1:-1519637 | MS.gene27270:CDS |
| GCTAACTCACCACTGGATCT+GGG | 0.494475 | 1.1:+1518535 | None:intergenic |
| GCGAAATGCCAAGTTGGTTG+TGG | 0.495089 | 1.1:-1515846 | MS.gene27270:CDS |
| TGGAGTCTCATCTGTTGATT+GGG | 0.497847 | 1.1:-1516168 | MS.gene27270:CDS |
| TTCATTCTTTAATTATTACA+TGG | 0.500991 | 1.1:-1518023 | MS.gene27270:intron |
| CATGGACAGAAGGATTTGAC+AGG | 0.501539 | 1.1:-1516368 | MS.gene27270:CDS |
| TTCCACTCAGCACAAACATA+AGG | 0.505669 | 1.1:+1519194 | None:intergenic |
| TGCAATTCTTGCAACTATGC+CGG | 0.505723 | 1.1:-1515882 | MS.gene27270:CDS |
| ACACAAACAGGTTGGCCTAA+AGG | 0.509211 | 1.1:-1516219 | MS.gene27270:intron |
| GTTCCAGCACGTAGGTCGAT+AGG | 0.511189 | 1.1:+1516586 | None:intergenic |
| CTGATTCAGAAAGCAAAAGA+TGG | 0.512055 | 1.1:-1519481 | MS.gene27270:CDS |
| GCTGTCCATGTGTTTATCAA+TGG | 0.515626 | 1.1:-1516884 | MS.gene27270:CDS |
| ACAAACAGGTTGGCCTAAAG+GGG | 0.515899 | 1.1:-1516217 | MS.gene27270:intron |
| TTTGTGCTGAGTGGAACTTT+GGG | 0.518987 | 1.1:-1519187 | MS.gene27270:intron |
| GGCCCTATCGACCTACGTGC+TGG | 0.519091 | 1.1:-1516589 | MS.gene27270:CDS |
| TTTGGTTGAAGTATGTTCCT+GGG | 0.520726 | 1.1:-1519056 | MS.gene27270:CDS |
| GGTACCATGTTCCAAGGTCC+TGG | 0.521759 | 1.1:-1515716 | MS.gene27270:CDS |
| CAGAATCATTTCTTCGTGGA+AGG | 0.526155 | 1.1:-1516943 | MS.gene27270:CDS |
| AAGGGTCAAGTATGGATCAA+TGG | 0.526204 | 1.1:-1515948 | MS.gene27270:CDS |
| GGCCCACAAGGAAGAGCACT+TGG | 0.526726 | 1.1:-1518651 | MS.gene27270:CDS |
| ATGAATTTGGTGTCTCCCAA+TGG | 0.527375 | 1.1:-1516188 | MS.gene27270:CDS |
| TGTCCCTTGGGTGATGTGTA+AGG | 0.528527 | 1.1:-1518568 | MS.gene27270:CDS |
| GGTGCTTCTTGGATAATGAA+TGG | 0.528944 | 1.1:+1519612 | None:intergenic |
| CTGTCCATGTGTTTATCAAT+GGG | 0.530690 | 1.1:-1516883 | MS.gene27270:CDS |
| TCATAGCTTGTAGTTATGAA+TGG | 0.530733 | 1.1:+1517868 | None:intergenic |
| CTATGCCGGAACTTATCGTC+AGG | 0.531405 | 1.1:-1515868 | MS.gene27270:CDS |
| CAATTCTAAGTTGTTATCAT+GGG | 0.532316 | 1.1:-1517246 | MS.gene27270:CDS |
| TTTCGCCTGACGATAAGTTC+CGG | 0.532860 | 1.1:+1515863 | None:intergenic |
| ACCTAAATATGGTCATTTGA+AGG | 0.533113 | 1.1:-1517723 | MS.gene27270:CDS |
| ATGGCTGTTGGATTAGGTAC+AGG | 0.534625 | 1.1:-1518591 | MS.gene27270:CDS |
| TGGAGTTGAACCATTGGCAT+TGG | 0.539466 | 1.1:-1515988 | MS.gene27270:CDS |
| CTACAGATAAATGCTTGCAA+TGG | 0.542639 | 1.1:-1518320 | MS.gene27270:intron |
| GGACATGAGCAGTATGGGAA+AGG | 0.544160 | 1.1:-1515967 | MS.gene27270:CDS |
| GCATTGGACATGAGCAGTAT+GGG | 0.544484 | 1.1:-1515972 | MS.gene27270:CDS |
| TCATGGAAGTCAGGAATCAC+AGG | 0.550670 | 1.1:-1516416 | MS.gene27270:CDS |
| GGCAACATTTGGATTTGTGA+AGG | 0.551117 | 1.1:+1517272 | None:intergenic |
| ATCAACAGATGAGACTCCAT+TGG | 0.551457 | 1.1:+1516172 | None:intergenic |
| GAGGAATGCACACTAATGCT+TGG | 0.552794 | 1.1:+1516914 | None:intergenic |
| GTTGCTCGTTTCATACAAAA+GGG | 0.552827 | 1.1:-1518049 | MS.gene27270:CDS |
| AATAATACATTGCCAGGAGA+AGG | 0.553523 | 1.1:+1519412 | None:intergenic |
| GCACATTTCAATGCACCTGA+TGG | 0.556406 | 1.1:-1516008 | MS.gene27270:CDS |
| CGTCAGGCGAAATGCCAAGT+TGG | 0.557079 | 1.1:-1515852 | MS.gene27270:CDS |
| TCAACAGATGAGACTCCATT+GGG | 0.557160 | 1.1:+1516173 | None:intergenic |
| TGGTCTTGACCATGGACAGA+AGG | 0.557257 | 1.1:-1516378 | MS.gene27270:CDS |
| ATATTGGATGGTTTATGCAA+AGG | 0.557748 | 1.1:-1515910 | MS.gene27270:CDS |
| TAGGCTGTCCACAACCAACT+TGG | 0.558476 | 1.1:+1515838 | None:intergenic |
| GTTTGCTAGAAAAGCTGCAC+AGG | 0.559158 | 1.1:+1517517 | None:intergenic |
| TTCCAGCACGTAGGTCGATA+GGG | 0.563878 | 1.1:+1516587 | None:intergenic |
| AATTAGTACCATCTTTGAGT+AGG | 0.565328 | 1.1:+1515819 | None:intergenic |
| TCATCAGAATCATTTCTTCG+TGG | 0.567472 | 1.1:-1516947 | MS.gene27270:CDS |
| GACATGAGCAGTATGGGAAA+GGG | 0.570823 | 1.1:-1515966 | MS.gene27270:CDS |
| TTGCTTCATGGTCTTGACCA+TGG | 0.573358 | 1.1:-1516386 | MS.gene27270:CDS |
| TTTGCAGGTACCATGTTCCA+AGG | 0.574539 | 1.1:-1515722 | MS.gene27270:intron |
| GAAAGCAAAAGATGGAGGGT+TGG | 0.574643 | 1.1:-1519473 | MS.gene27270:CDS |
| GATAACAACTTAGAATTGCT+AGG | 0.576031 | 1.1:+1517251 | None:intergenic |
| ACCTTGTGCCATTTCAACTG+TGG | 0.587399 | 1.1:+1516116 | None:intergenic |
| AGATCCTGCACTGGTCGCTG+GGG | 0.591214 | 1.1:+1518082 | None:intergenic |
| GATCCTGCACTGGTCGCTGG+GGG | 0.592080 | 1.1:+1518083 | None:intergenic |
| CTAAACTATGGACTGAGTCA+TGG | 0.593403 | 1.1:-1518256 | MS.gene27270:CDS |
| CTGCTCATGTCCAATGCCAA+TGG | 0.594494 | 1.1:+1515978 | None:intergenic |
| TCTGTTCTGAAACTGATCCC+AGG | 0.600350 | 1.1:+1519039 | None:intergenic |
| TGGATCAATGGACAAAGCAT+AGG | 0.604928 | 1.1:-1515936 | MS.gene27270:CDS |
| ATACATCTGTCCTACAATCA+GGG | 0.605634 | 1.1:+1517417 | None:intergenic |
| TTAACCAGGACCTTGGAACA+TGG | 0.606779 | 1.1:+1515712 | None:intergenic |
| GCTCCTAATGATGTAACAGT+AGG | 0.606807 | 1.1:+1517650 | None:intergenic |
| ACCTGATGGAGTTGAACCAT+TGG | 0.609035 | 1.1:-1515994 | MS.gene27270:CDS |
| AAGCATAGGAAGATATTGGA+TGG | 0.609264 | 1.1:-1515922 | MS.gene27270:CDS |
| GAGAATGAGTATGGCCCACA+AGG | 0.610168 | 1.1:-1518663 | MS.gene27270:CDS |
| GACCTTATGTTTGTGCTGAG+TGG | 0.610645 | 1.1:-1519196 | MS.gene27270:CDS |
| ATTTCCCATTGATAAACACA+TGG | 0.611686 | 1.1:+1516879 | None:intergenic |
| AGGAACTAATTTCGGACGAT+CGG | 0.614751 | 1.1:-1517899 | MS.gene27270:CDS |
| TTCAGAAAGCAAAAGATGGA+GGG | 0.615815 | 1.1:-1519477 | MS.gene27270:CDS |
| GTGGACAGCCTACTCAAAGA+TGG | 0.615918 | 1.1:-1515827 | MS.gene27270:intron |
| GCGAACGCGAGATCCTGCAC+TGG | 0.618153 | 1.1:+1518073 | None:intergenic |
| GGACTGAGTCATGGAGTGGT+TGG | 0.618267 | 1.1:-1518247 | MS.gene27270:intron |
| ATTCAGAAAGCAAAAGATGG+AGG | 0.619685 | 1.1:-1519478 | MS.gene27270:CDS |
| TGGTCATGCATACTCAAACT+GGG | 0.624854 | 1.1:-1518622 | MS.gene27270:CDS |
| AATTTCGGACGATCGGCTGG+AGG | 0.627314 | 1.1:-1517892 | MS.gene27270:CDS |
| TCTTCCTTACACATCACCCA+AGG | 0.629739 | 1.1:+1518564 | None:intergenic |
| AGATGATGCCCCAGATCCAG+TGG | 0.631725 | 1.1:-1518544 | MS.gene27270:intron |
| CTAACTCACCACTGGATCTG+GGG | 0.639843 | 1.1:+1518536 | None:intergenic |
| GCTCGTTTCATACAAAAGGG+TGG | 0.641579 | 1.1:-1518046 | MS.gene27270:CDS |
| ACTATCTATGGTATATAACC+AGG | 0.648277 | 1.1:-1517127 | MS.gene27270:intron |
| AATGAATGGAACCAGAGATG+AGG | 0.654785 | 1.1:+1519626 | None:intergenic |
| CTATTATCATCAATGGCCAA+AGG | 0.665404 | 1.1:-1519654 | MS.gene27270:CDS |
| GAAAAGCTGTTTCAGTCACA+AGG | 0.669396 | 1.1:-1518846 | MS.gene27270:CDS |
| CTTCCTTACACATCACCCAA+GGG | 0.670888 | 1.1:+1518565 | None:intergenic |
| CAAACAGGTTGGCCTAAAGG+GGG | 0.672533 | 1.1:-1516216 | MS.gene27270:intron |
| TAGTATAGTATATACTTCAG+GGG | 0.680900 | 1.1:+1519591 | None:intergenic |
| GGGAGGATACTTATGGACCA+AGG | 0.681332 | 1.1:+1517437 | None:intergenic |
| TGAAGATGTATCTTCGCTAG+CGG | 0.687691 | 1.1:-1517213 | MS.gene27270:CDS |
| CACATGGACAGCATCACCAG+AGG | 0.689285 | 1.1:+1516895 | None:intergenic |
| GCCACAGTTGAAATGGCACA+AGG | 0.694536 | 1.1:-1516117 | MS.gene27270:intron |
| GTCCGAAATTAGTTCCTCCG+TGG | 0.697646 | 1.1:+1517905 | None:intergenic |
| CTATGGACTGAGTCATGGAG+TGG | 0.709849 | 1.1:-1518251 | MS.gene27270:CDS |
| AAGCTGTTTCAGTCACAAGG+TGG | 0.718827 | 1.1:-1518843 | MS.gene27270:CDS |
| AATGACAAATGATAGTACCA+CGG | 0.725388 | 1.1:-1517922 | MS.gene27270:intron |
| ATGGACAGAAGGATTTGACA+GGG | 0.731802 | 1.1:-1516367 | MS.gene27270:CDS |
| GAAATGTGTGTAGATGTGGG+AGG | 0.739680 | 1.1:-1519506 | MS.gene27270:intron |
| AGGATACTTATGGACCAAGG+AGG | 0.747272 | 1.1:+1517440 | None:intergenic |
| CATCTGTCCTACAATCAGGG+AGG | 0.749201 | 1.1:+1517420 | None:intergenic |
| GACAAATGATAGTACCACGG+AGG | 0.759475 | 1.1:-1517919 | MS.gene27270:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGAAAAAAAAAACTTTT+AGG | - | chr1.1:1516419-1516438 | MS.gene27270:CDS | 10.0% |
| !! | AACTTCAAACATTTATTATT+TGG | - | chr1.1:1516182-1516201 | MS.gene27270:CDS | 15.0% |
| !! | TATTAATGAATTGATTGTTA+TGG | - | chr1.1:1518018-1518037 | MS.gene27270:intron | 15.0% |
| !! | TTCATTCTTTAATTATTACA+TGG | - | chr1.1:1517312-1517331 | MS.gene27270:intron | 15.0% |
| !! | AATAGTATAGTATATACTTC+AGG | + | chr1.1:1515749-1515768 | None:intergenic | 20.0% |
| !! | AATTACAAATCAACCTTAAA+AGG | + | chr1.1:1516329-1516348 | None:intergenic | 20.0% |
| !! | AATTATGTATATACACAAAC+AGG | - | chr1.1:1519104-1519123 | MS.gene27270:intron | 20.0% |
| !! | ACAACTAACTTCATAAATAA+TGG | + | chr1.1:1517127-1517146 | None:intergenic | 20.0% |
| !! | ACTCTATTATCTTAACTAAA+AGG | + | chr1.1:1516975-1516994 | None:intergenic | 20.0% |
| !! | ATAATTCGGTTAAAATTAGT+TGG | - | chr1.1:1518510-1518529 | MS.gene27270:intron | 20.0% |
| !! | ATAGTATAGTATATACTTCA+GGG | + | chr1.1:1515748-1515767 | None:intergenic | 20.0% |
| !! | ATTTAAAAATACCAAGCTAT+TGG | - | chr1.1:1518250-1518269 | MS.gene27270:CDS | 20.0% |
| !! | ATTTAGATTAACAATGAGTT+TGG | + | chr1.1:1516945-1516964 | None:intergenic | 20.0% |
| !! | ATTTATCTGTAGGAAAAAAT+TGG | + | chr1.1:1517007-1517026 | None:intergenic | 20.0% |
| !! | CTAAAGTAATGACTATATTT+AGG | + | chr1.1:1517547-1517566 | None:intergenic | 20.0% |
| !! | GTTGTATTAGTCATTAAATT+TGG | + | chr1.1:1519750-1519769 | None:intergenic | 20.0% |
| !! | TTATGTAGTTAATTCTTGAA+TGG | - | chr1.1:1516364-1516383 | MS.gene27270:CDS | 20.0% |
| !! | TTCTTTAATTATTACATGGT+TGG | - | chr1.1:1517316-1517335 | MS.gene27270:intron | 20.0% |
| !!! | TCTTTTTTTTCATAGAATAG+TGG | - | chr1.1:1518883-1518902 | MS.gene27270:CDS | 20.0% |
| !!! | TTATTGATACTTATGTGTTT+TGG | - | chr1.1:1515888-1515907 | MS.gene27270:CDS | 20.0% |
| !!! | TTGGTATTTTTAAATCTAGA+GGG | + | chr1.1:1518245-1518264 | None:intergenic | 20.0% |
| ! | AGAAAAGCTATTATCATCAA+TGG | - | chr1.1:1515674-1515693 | MS.gene27270:CDS | 25.0% |
| ! | AGAGATGATAAAATTCAAGT+TGG | + | chr1.1:1518836-1518855 | None:intergenic | 25.0% |
| ! | CAATTCTAAGTTGTTATCAT+GGG | - | chr1.1:1518089-1518108 | MS.gene27270:CDS | 25.0% |
| ! | CATAAAATGTATCTTAGACT+CGG | - | chr1.1:1518615-1518634 | MS.gene27270:CDS | 25.0% |
| ! | CTTACTTGTGAAAGAATTAT+TGG | + | chr1.1:1516519-1516538 | None:intergenic | 25.0% |
| ! | CTTTATGTACATCTTAGAAT+TGG | - | chr1.1:1516117-1516136 | MS.gene27270:intron | 25.0% |
| ! | TAAACCAAGATGAGATAATT+CGG | - | chr1.1:1518496-1518515 | MS.gene27270:intron | 25.0% |
| ! | TAGTATAGTATATACTTCAG+GGG | + | chr1.1:1515747-1515766 | None:intergenic | 25.0% |
| ! | TGCTATATTACTATTGCATA+AGG | - | chr1.1:1519067-1519086 | MS.gene27270:CDS | 25.0% |
| ! | TTGTTAAGAGAACCTAAATA+TGG | - | chr1.1:1517601-1517620 | MS.gene27270:intron | 25.0% |
| !! | AAATTTGGTTTACTAGATCT+TGG | + | chr1.1:1519735-1519754 | None:intergenic | 25.0% |
| !! | ACTTATTACTTCAATTTTGC+AGG | - | chr1.1:1519598-1519617 | MS.gene27270:intron | 25.0% |
| !! | AGTTGAAATCTTACTGTTTT+TGG | - | chr1.1:1518337-1518356 | MS.gene27270:intron | 25.0% |
| !! | TAATCTAATTTGAAACCTTC+AGG | - | chr1.1:1519305-1519324 | MS.gene27270:intron | 25.0% |
| !! | TTTATCAATGGGAAATTTTC+AGG | - | chr1.1:1518463-1518482 | MS.gene27270:intron | 25.0% |
| !!! | ATGGTAGTTTTTGAAGAATT+AGG | - | chr1.1:1519663-1519682 | MS.gene27270:CDS | 25.0% |
| !!! | CAGTGTTTTAGAAGTTATTT+CGG | + | chr1.1:1517739-1517758 | None:intergenic | 25.0% |
| !!! | CTTGGTATTTTTAAATCTAG+AGG | + | chr1.1:1518246-1518265 | None:intergenic | 25.0% |
| !!! | GTTGAAATCTTACTGTTTTT+GGG | - | chr1.1:1518338-1518357 | MS.gene27270:intron | 25.0% |
| !!! | GTTTTTTTATTTGTGTGTAG+AGG | - | chr1.1:1516248-1516267 | MS.gene27270:intron | 25.0% |
| !!! | TAGTTTTTGAAGAATTAGGA+GGG | - | chr1.1:1519667-1519686 | MS.gene27270:CDS | 25.0% |
| AAAACCAACAAACAACTTGA+TGG | - | chr1.1:1519644-1519663 | MS.gene27270:CDS | 30.0% | |
| AATGACAAATGATAGTACCA+CGG | - | chr1.1:1517413-1517432 | MS.gene27270:CDS | 30.0% | |
| AATTAGTACCATCTTTGAGT+AGG | + | chr1.1:1519519-1519538 | None:intergenic | 30.0% | |
| ACCTAAATATGGTCATTTGA+AGG | - | chr1.1:1517612-1517631 | MS.gene27270:intron | 30.0% | |
| ACTATCTATGGTATATAACC+AGG | - | chr1.1:1518208-1518227 | MS.gene27270:intron | 30.0% | |
| ACTGCAAGAGTAAGAATAAA+AGG | - | chr1.1:1517946-1517965 | MS.gene27270:intron | 30.0% | |
| AGCAAACTATCATTCGAATT+CGG | - | chr1.1:1517834-1517853 | MS.gene27270:intron | 30.0% | |
| ATATTGGATGGTTTATGCAA+AGG | - | chr1.1:1519425-1519444 | MS.gene27270:CDS | 30.0% | |
| ATCAGTTTCAGAACAGATAA+TGG | - | chr1.1:1516302-1516321 | MS.gene27270:intron | 30.0% | |
| ATGTATATACACAAACAGGT+TGG | - | chr1.1:1519108-1519127 | MS.gene27270:intron | 30.0% | |
| ATTAAGACAGTGCAGAAAAA+AGG | - | chr1.1:1516093-1516112 | MS.gene27270:intron | 30.0% | |
| ATTTCCCATTGATAAACACA+TGG | + | chr1.1:1518459-1518478 | None:intergenic | 30.0% | |
| CAAGAGTAACCTTCAATAAT+AGG | - | chr1.1:1517860-1517879 | MS.gene27270:CDS | 30.0% | |
| CACTAACCATATTCATCAAT+TGG | + | chr1.1:1517503-1517522 | None:intergenic | 30.0% | |
| CTGCAAGAGTAAGAATAAAA+GGG | - | chr1.1:1517947-1517966 | MS.gene27270:intron | 30.0% | |
| GAAGTTAGTTGTGAAAACAA+TGG | - | chr1.1:1517135-1517154 | MS.gene27270:CDS | 30.0% | |
| GACAGAAGTTTCACATTTAA+CGG | - | chr1.1:1518725-1518744 | MS.gene27270:intron | 30.0% | |
| GATAACAACTTAGAATTGCT+AGG | + | chr1.1:1518087-1518106 | None:intergenic | 30.0% | |
| GCAATTCTAAGTTGTTATCA+TGG | - | chr1.1:1518088-1518107 | MS.gene27270:CDS | 30.0% | |
| GTAATAAGCAAGATACTAAC+AGG | + | chr1.1:1518812-1518831 | None:intergenic | 30.0% | |
| TAACAATGATCTATGTTTCC+AGG | - | chr1.1:1517771-1517790 | MS.gene27270:intron | 30.0% | |
| TATTGGATGGTTTATGCAAA+GGG | - | chr1.1:1519426-1519445 | MS.gene27270:CDS | 30.0% | |
| TCCTTCAAATGACCATATTT+AGG | + | chr1.1:1517616-1517635 | None:intergenic | 30.0% | |
| TCGTTAAATAGTTGCTATAG+CGG | - | chr1.1:1519044-1519063 | MS.gene27270:CDS | 30.0% | |
| TTAACCGAATTATCTCATCT+TGG | + | chr1.1:1518503-1518522 | None:intergenic | 30.0% | |
| TTAGGCTTGTATGGTTTATT+GGG | + | chr1.1:1517063-1517082 | None:intergenic | 30.0% | |
| TTCCAAATTTGCACTAAATC+AGG | + | chr1.1:1516841-1516860 | None:intergenic | 30.0% | |
| TTCTTCTCTATCTTCTTTCT+TGG | - | chr1.1:1515617-1515636 | MS.gene27270:CDS | 30.0% | |
| TTGTAGATTGAGAATGAGTA+TGG | - | chr1.1:1516663-1516682 | MS.gene27270:intron | 30.0% | |
| TTTAGGCTTGTATGGTTTAT+TGG | + | chr1.1:1517064-1517083 | None:intergenic | 30.0% | |
| TTTAGGTAGTAGATAGAAGT+TGG | - | chr1.1:1518540-1518559 | MS.gene27270:intron | 30.0% | |
| ! | AACTTTTGCTAAAATCACAG+TGG | - | chr1.1:1516904-1516923 | MS.gene27270:CDS | 30.0% |
| ! | TCATAGCTTGTAGTTATGAA+TGG | + | chr1.1:1517470-1517489 | None:intergenic | 30.0% |
| ! | TTAGTGCAAATTTGGAATGA+CGG | - | chr1.1:1516844-1516863 | MS.gene27270:intron | 30.0% |
| ! | TTTACCAGAGATATTTTCCA+AGG | + | chr1.1:1519696-1519715 | None:intergenic | 30.0% |
| ! | TTTGAAATGTGTGTAGATGT+GGG | - | chr1.1:1515826-1515845 | MS.gene27270:intron | 30.0% |
| !! | AACAGATAATGGTCCTTTTA+AGG | - | chr1.1:1516313-1516332 | MS.gene27270:intron | 30.0% |
| !! | ATTGCTTGATAGCTTTATGA+AGG | + | chr1.1:1517639-1517658 | None:intergenic | 30.0% |
| !! | CAATGTATTATTCTGGAATC+TGG | - | chr1.1:1515934-1515953 | MS.gene27270:CDS | 30.0% |
| !! | GTAGTTTTTGAAGAATTAGG+AGG | - | chr1.1:1519666-1519685 | MS.gene27270:CDS | 30.0% |
| !!! | TGTTTTAGAAGTTATTTCGG+AGG | + | chr1.1:1517736-1517755 | None:intergenic | 30.0% |
| AAAGCAAGGAAAAAGCTAGA+CGG | + | chr1.1:1518304-1518323 | None:intergenic | 35.0% | |
| AACCATACAAGCCTAAACTA+TGG | - | chr1.1:1517067-1517086 | MS.gene27270:intron | 35.0% | |
| AAGCATAGGAAGATATTGGA+TGG | - | chr1.1:1519413-1519432 | MS.gene27270:intron | 35.0% | |
| AAGGAGAAAAGAAGAGCAAA+AGG | + | chr1.1:1517184-1517203 | None:intergenic | 35.0% | |
| AATAATACATTGCCAGGAGA+AGG | + | chr1.1:1515926-1515945 | None:intergenic | 35.0% | |
| AATACATCTGTCCTACAATC+AGG | + | chr1.1:1517922-1517941 | None:intergenic | 35.0% | |
| AGGAGAAAAGAAGAGCAAAA+GGG | + | chr1.1:1517183-1517202 | None:intergenic | 35.0% | |
| AGTTGCTCGTTTCATACAAA+AGG | - | chr1.1:1517285-1517304 | MS.gene27270:CDS | 35.0% | |
| ATACATCTGTCCTACAATCA+GGG | + | chr1.1:1517921-1517940 | None:intergenic | 35.0% | |
| ATTCAGAAAGCAAAAGATGG+AGG | - | chr1.1:1515857-1515876 | MS.gene27270:CDS | 35.0% | |
| CACAAGGTAAGAAAAGTTAC+TGG | - | chr1.1:1519234-1519253 | MS.gene27270:CDS | 35.0% | |
| CATTGCAAGCATTTATCTGT+AGG | + | chr1.1:1517017-1517036 | None:intergenic | 35.0% | |
| CGAAGATACATCTTCATCAT+AGG | + | chr1.1:1518118-1518137 | None:intergenic | 35.0% | |
| CTACAGATAAATGCTTGCAA+TGG | - | chr1.1:1517015-1517034 | MS.gene27270:intron | 35.0% | |
| CTATTATCATCAATGGCCAA+AGG | - | chr1.1:1515681-1515700 | MS.gene27270:CDS | 35.0% | |
| CTGACTTCCATGATTCAAAA+TGG | + | chr1.1:1518912-1518931 | None:intergenic | 35.0% | |
| CTGATTCAGAAAGCAAAAGA+TGG | - | chr1.1:1515854-1515873 | MS.gene27270:CDS | 35.0% | |
| CTGTCCATGTGTTTATCAAT+GGG | - | chr1.1:1518452-1518471 | MS.gene27270:intron | 35.0% | |
| GAATAGTAACAGAAGAAGCT+TGG | + | chr1.1:1515600-1515619 | None:intergenic | 35.0% | |
| GAATCCTTGGAAAATATCTC+TGG | - | chr1.1:1519689-1519708 | MS.gene27270:CDS | 35.0% | |
| GACAAAGCATAGGAAGATAT+TGG | - | chr1.1:1519409-1519428 | MS.gene27270:intron | 35.0% | |
| GAGATACTAGTGACTATCTA+TGG | - | chr1.1:1518196-1518215 | MS.gene27270:intron | 35.0% | |
| GATCCTACTGTTACATCATT+AGG | - | chr1.1:1517682-1517701 | MS.gene27270:CDS | 35.0% | |
| GATGCTCCAATTGATGAATA+TGG | - | chr1.1:1517494-1517513 | MS.gene27270:CDS | 35.0% | |
| GGAAAATATCTCTGGTAAAG+AGG | - | chr1.1:1519697-1519716 | MS.gene27270:CDS | 35.0% | |
| GTCATAGTGCCTATTATTGA+AGG | + | chr1.1:1517872-1517891 | None:intergenic | 35.0% | |
| GTTGCTCGTTTCATACAAAA+GGG | - | chr1.1:1517286-1517305 | MS.gene27270:CDS | 35.0% | |
| TAGAATTGCTAGGCAACATT+TGG | + | chr1.1:1518077-1518096 | None:intergenic | 35.0% | |
| TCAAGACCATGAAGCAAAAT+TGG | + | chr1.1:1518946-1518965 | None:intergenic | 35.0% | |
| TCATCAGAATCATTTCTTCG+TGG | - | chr1.1:1518388-1518407 | MS.gene27270:intron | 35.0% | |
| TGAAAACCTGATGACCAAAT+GGG | + | chr1.1:1517215-1517234 | None:intergenic | 35.0% | |
| TGCCTGATTTAGTGCAAATT+TGG | - | chr1.1:1516836-1516855 | MS.gene27270:intron | 35.0% | |
| TGTGAAAGATCAAGAAAGAG+TGG | - | chr1.1:1516592-1516611 | MS.gene27270:CDS | 35.0% | |
| TTAACCGAGAAAAAAGAACC+AGG | + | chr1.1:1517345-1517364 | None:intergenic | 35.0% | |
| TTCAGAAAGCAAAAGATGGA+GGG | - | chr1.1:1515858-1515877 | MS.gene27270:CDS | 35.0% | |
| TTCCAGAATAATACATTGCC+AGG | + | chr1.1:1515932-1515951 | None:intergenic | 35.0% | |
| TTTGGTTGAAGTATGTTCCT+GGG | - | chr1.1:1516279-1516298 | MS.gene27270:intron | 35.0% | |
| ! | ACTACCATCAAGTTGTTTGT+TGG | + | chr1.1:1519651-1519670 | None:intergenic | 35.0% |
| ! | AGATTCCTATTTCCTTTTGC+AGG | - | chr1.1:1518680-1518699 | MS.gene27270:intron | 35.0% |
| ! | ATCAGGTTTTCAGAATTTGG+TGG | - | chr1.1:1517223-1517242 | MS.gene27270:CDS | 35.0% |
| ! | ATCATTAGGAGCATATGAAC+AGG | - | chr1.1:1517696-1517715 | MS.gene27270:CDS | 35.0% |
| ! | CATTTTGAATCATGGAAGTC+AGG | - | chr1.1:1518910-1518929 | MS.gene27270:intron | 35.0% |
| ! | GTCATCAGGTTTTCAGAATT+TGG | - | chr1.1:1517220-1517239 | MS.gene27270:CDS | 35.0% |
| ! | GTGGAATCCATTTTGAATCA+TGG | - | chr1.1:1518902-1518921 | MS.gene27270:intron | 35.0% |
| ! | GTGTTGCAGTACAATTTTGA+AGG | - | chr1.1:1516048-1516067 | MS.gene27270:intron | 35.0% |
| ! | GTTTGAAATGTGTGTAGATG+TGG | - | chr1.1:1515825-1515844 | MS.gene27270:intron | 35.0% |
| ! | TTATTACATGGTTGGTTACC+TGG | - | chr1.1:1517324-1517343 | MS.gene27270:intron | 35.0% |
| ! | TTTTATTAGTTCCAGCACGT+AGG | + | chr1.1:1518760-1518779 | None:intergenic | 35.0% |
| !! | TGCAGTACAATTTTGAAGGA+AGG | - | chr1.1:1516052-1516071 | MS.gene27270:intron | 35.0% |
| !!! | AATTAGTTGGCGTTGGTTTT+AGG | - | chr1.1:1518523-1518542 | MS.gene27270:intron | 35.0% |
| !!! | GTTACCTGGTTCTTTTTTCT+CGG | - | chr1.1:1517338-1517357 | MS.gene27270:intron | 35.0% |
| !!! | GTTGTTTGTTGGTTTTAACC+AGG | + | chr1.1:1519640-1519659 | None:intergenic | 35.0% |
| AAAACCAGCCACAGTTGAAA+TGG | - | chr1.1:1519211-1519230 | MS.gene27270:CDS | 40.0% | |
| AAGAAGCTTGGAAACTGAGT+TGG | + | chr1.1:1515588-1515607 | None:intergenic | 40.0% | |
| AAGAATTAGGAGGGAATCCT+TGG | - | chr1.1:1519676-1519695 | MS.gene27270:CDS | 40.0% | |
| AAGGGTCAAGTATGGATCAA+TGG | - | chr1.1:1519387-1519406 | MS.gene27270:intron | 40.0% | |
| AATCACAGCTTCTAGACTTC+TGG | - | chr1.1:1518155-1518174 | MS.gene27270:intron | 40.0% | |
| AATGAATGGAACCAGAGATG+AGG | + | chr1.1:1515712-1515731 | None:intergenic | 40.0% | |
| AATGTTCATGAACCTTCTCC+TGG | - | chr1.1:1515911-1515930 | MS.gene27270:CDS | 40.0% | |
| ACAATCAGGGAGGATACTTA+TGG | + | chr1.1:1517908-1517927 | None:intergenic | 40.0% | |
| ACTAGAGAAAGCCAATAGCT+TGG | + | chr1.1:1518264-1518283 | None:intergenic | 40.0% | |
| AGGAACTAATTTCGGACGAT+CGG | - | chr1.1:1517436-1517455 | MS.gene27270:CDS | 40.0% | |
| AGGATTTGACAGGGCAAAAA+TGG | - | chr1.1:1518977-1518996 | MS.gene27270:intron | 40.0% | |
| ATCAACAGATGAGACTCCAT+TGG | + | chr1.1:1519166-1519185 | None:intergenic | 40.0% | |
| ATGGACAGAAGGATTTGACA+GGG | - | chr1.1:1518968-1518987 | MS.gene27270:intron | 40.0% | |
| ATGGAGTCTCATCTGTTGAT+TGG | - | chr1.1:1519166-1519185 | MS.gene27270:intron | 40.0% | |
| CAAGCAATGTGAACATGCTT+TGG | - | chr1.1:1517651-1517670 | MS.gene27270:CDS | 40.0% | |
| CAATGAGTTTGGCTGAATCA+CGG | + | chr1.1:1516934-1516953 | None:intergenic | 40.0% | |
| CAGAATCATTTCTTCGTGGA+AGG | - | chr1.1:1518392-1518411 | MS.gene27270:intron | 40.0% | |
| CAGGCATATGTATTCTCTTC+AGG | - | chr1.1:1517790-1517809 | MS.gene27270:intron | 40.0% | |
| CATGACTCAGTCCATAGTTT+AGG | + | chr1.1:1517081-1517100 | None:intergenic | 40.0% | |
| CGGTTAAAATTAGTTGGCGT+TGG | - | chr1.1:1518516-1518535 | MS.gene27270:intron | 40.0% | |
| CTCCTGGCAATGTATTATTC+TGG | - | chr1.1:1515927-1515946 | MS.gene27270:CDS | 40.0% | |
| CTGAAAACCTGATGACCAAA+TGG | + | chr1.1:1517216-1517235 | None:intergenic | 40.0% | |
| CTGAAGAGAATACATATGCC+TGG | + | chr1.1:1517792-1517811 | None:intergenic | 40.0% | |
| CTTGATCTTTCACAACATGC+AGG | + | chr1.1:1516586-1516605 | None:intergenic | 40.0% | |
| GACCAAATGGGAATAGGAAA+AGG | + | chr1.1:1517203-1517222 | None:intergenic | 40.0% | |
| GCAAAAATGGCTGTTGGATT+AGG | - | chr1.1:1516738-1516757 | MS.gene27270:intron | 40.0% | |
| GCTCCTAATGATGTAACAGT+AGG | + | chr1.1:1517688-1517707 | None:intergenic | 40.0% | |
| GCTGTCCATGTGTTTATCAA+TGG | - | chr1.1:1518451-1518470 | MS.gene27270:intron | 40.0% | |
| GGAACATACTTCAACCAAAC+AGG | + | chr1.1:1516278-1516297 | None:intergenic | 40.0% | |
| GGCAACATTTGGATTTGTGA+AGG | + | chr1.1:1518066-1518085 | None:intergenic | 40.0% | |
| GGTGCTTCTTGGATAATGAA+TGG | + | chr1.1:1515726-1515745 | None:intergenic | 40.0% | |
| GTCCATAGTTTAGGCTTGTA+TGG | + | chr1.1:1517072-1517091 | None:intergenic | 40.0% | |
| GTTATGGTTTCGTGAAGATG+AGG | - | chr1.1:1518034-1518053 | MS.gene27270:CDS | 40.0% | |
| GTTTGGTTGAAGTATGTTCC+TGG | - | chr1.1:1516278-1516297 | MS.gene27270:intron | 40.0% | |
| TAAGTATCCTCCCTGATTGT+AGG | - | chr1.1:1517908-1517927 | MS.gene27270:CDS | 40.0% | |
| TACCACGGAGGAACTAATTT+CGG | - | chr1.1:1517428-1517447 | MS.gene27270:CDS | 40.0% | |
| TCAACAGATGAGACTCCATT+GGG | + | chr1.1:1519165-1519184 | None:intergenic | 40.0% | |
| TGAAGATGTATCTTCGCTAG+CGG | - | chr1.1:1518122-1518141 | MS.gene27270:intron | 40.0% | |
| TGCAATTCTTGCAACTATGC+CGG | - | chr1.1:1519453-1519472 | MS.gene27270:CDS | 40.0% | |
| TGCATAGAACTGAGAAAGCA+AGG | + | chr1.1:1518318-1518337 | None:intergenic | 40.0% | |
| TGGATCAATGGACAAAGCAT+AGG | - | chr1.1:1519399-1519418 | MS.gene27270:intron | 40.0% | |
| TGGTCATGCATACTCAAACT+GGG | - | chr1.1:1516713-1516732 | MS.gene27270:intron | 40.0% | |
| TGTGTAGAGGATTTCCTGTT+TGG | - | chr1.1:1516261-1516280 | MS.gene27270:intron | 40.0% | |
| TTCCACTCAGCACAAACATA+AGG | + | chr1.1:1516144-1516163 | None:intergenic | 40.0% | |
| TTTGTGCTGAGTGGAACTTT+GGG | - | chr1.1:1516148-1516167 | MS.gene27270:CDS | 40.0% | |
| ! | AACTTTTAGGCTGCAATGCA+AGG | - | chr1.1:1516432-1516451 | MS.gene27270:CDS | 40.0% |
| ! | ACAGGTCCAATTTTGCTTCA+TGG | - | chr1.1:1518937-1518956 | MS.gene27270:intron | 40.0% |
| ! | CTAAACTATGGACTGAGTCA+TGG | - | chr1.1:1517079-1517098 | MS.gene27270:intron | 40.0% |
| ! | CTCCTTTTCCTATTCCCATT+TGG | - | chr1.1:1517198-1517217 | MS.gene27270:CDS | 40.0% |
| ! | GAAAAGCTGTTTCAGTCACA+AGG | - | chr1.1:1516489-1516508 | MS.gene27270:intron | 40.0% |
| ! | TCGAGTGCTTAACTGATTTC+AGG | - | chr1.1:1517577-1517596 | MS.gene27270:intron | 40.0% |
| ! | TGGAGTCTCATCTGTTGATT+GGG | - | chr1.1:1519167-1519186 | MS.gene27270:intron | 40.0% |
| !! | ATGAATTTGGTGTCTCCCAA+TGG | - | chr1.1:1519147-1519166 | MS.gene27270:intron | 40.0% |
| !! | CTTCTAAAACACTGCGTTCA+TGG | - | chr1.1:1517745-1517764 | MS.gene27270:intron | 40.0% |
| AAAGGGGGAGGCTATGAATT+TGG | - | chr1.1:1519134-1519153 | MS.gene27270:intron | 45.0% | |
| AATCAGGCAAGATCACGAGA+AGG | + | chr1.1:1516825-1516844 | None:intergenic | 45.0% | |
| AATTCATAGCCTCCCCCTTT+AGG | + | chr1.1:1519134-1519153 | None:intergenic | 45.0% | |
| ACCTGATGGAGTTGAACCAT+TGG | - | chr1.1:1519341-1519360 | MS.gene27270:intron | 45.0% | |
| ACGACGCTGATACAGAAGTT+AGG | + | chr1.1:1519028-1519047 | None:intergenic | 45.0% | |
| AGCATTAGTGTGCATTCCTC+TGG | - | chr1.1:1518424-1518443 | MS.gene27270:intron | 45.0% | |
| AGGATACTTATGGACCAAGG+AGG | + | chr1.1:1517898-1517917 | None:intergenic | 45.0% | |
| AGGGCAAAAATGGTCATACC+AGG | - | chr1.1:1518987-1519006 | MS.gene27270:intron | 45.0% | |
| ATTAGGTACAGGTGTCCCTT+GGG | - | chr1.1:1516755-1516774 | MS.gene27270:intron | 45.0% | |
| CAAAGGAGAATCCTCATCTC+TGG | - | chr1.1:1515698-1515717 | MS.gene27270:CDS | 45.0% | |
| CAGAGATGAGGATTCTCCTT+TGG | + | chr1.1:1515700-1515719 | None:intergenic | 45.0% | |
| CATGGACAGAAGGATTTGAC+AGG | - | chr1.1:1518967-1518986 | MS.gene27270:intron | 45.0% | |
| CCTATTCCCATTTGGTCATC+AGG | - | chr1.1:1517206-1517225 | MS.gene27270:CDS | 45.0% | |
| CCTGATGACCAAATGGGAAT+AGG | + | chr1.1:1517209-1517228 | None:intergenic | 45.0% | |
| CTCAAACTGGGCTGCAAAAA+TGG | - | chr1.1:1516725-1516744 | MS.gene27270:intron | 45.0% | |
| CTGGTCATGCATACTCAAAC+TGG | - | chr1.1:1516712-1516731 | MS.gene27270:intron | 45.0% | |
| CTGTCAAATCCTTCTGTCCA+TGG | + | chr1.1:1518969-1518988 | None:intergenic | 45.0% | |
| CTTCCTTACACATCACCCAA+GGG | + | chr1.1:1516773-1516792 | None:intergenic | 45.0% | |
| GAAAGCAAAAGATGGAGGGT+TGG | - | chr1.1:1515862-1515881 | MS.gene27270:CDS | 45.0% | |
| GAAATGTGTGTAGATGTGGG+AGG | - | chr1.1:1515829-1515848 | MS.gene27270:CDS | 45.0% | |
| GACAAATGATAGTACCACGG+AGG | - | chr1.1:1517416-1517435 | MS.gene27270:CDS | 45.0% | |
| GACATGAGCAGTATGGGAAA+GGG | - | chr1.1:1519369-1519388 | MS.gene27270:intron | 45.0% | |
| GACCTTATGTTTGTGCTGAG+TGG | - | chr1.1:1516139-1516158 | MS.gene27270:CDS | 45.0% | |
| GAGGAATGCACACTAATGCT+TGG | + | chr1.1:1518424-1518443 | None:intergenic | 45.0% | |
| GCACATTTCAATGCACCTGA+TGG | - | chr1.1:1519327-1519346 | MS.gene27270:intron | 45.0% | |
| GCACTTCTTAGTGTAGCTGT+TGG | - | chr1.1:1518782-1518801 | MS.gene27270:intron | 45.0% | |
| GCATTGGACATGAGCAGTAT+GGG | - | chr1.1:1519363-1519382 | MS.gene27270:intron | 45.0% | |
| GCTCGTTTCATACAAAAGGG+TGG | - | chr1.1:1517289-1517308 | MS.gene27270:intron | 45.0% | |
| GTATGGGAAAGGGTCAAGTA+TGG | - | chr1.1:1519379-1519398 | MS.gene27270:intron | 45.0% | |
| GTGCATTGAAATGTGCCTGA+AGG | + | chr1.1:1519323-1519342 | None:intergenic | 45.0% | |
| GTTTGTGCTGAGTGGAACTT+TGG | - | chr1.1:1516147-1516166 | MS.gene27270:CDS | 45.0% | |
| TAGAGGGTAATCTACTGACC+TGG | + | chr1.1:1518229-1518248 | None:intergenic | 45.0% | |
| TCATGGAAGTCAGGAATCAC+AGG | - | chr1.1:1518919-1518938 | MS.gene27270:intron | 45.0% | |
| TCTTCCTTACACATCACCCA+AGG | + | chr1.1:1516774-1516793 | None:intergenic | 45.0% | |
| TGGAGTTGAACCATTGGCAT+TGG | - | chr1.1:1519347-1519366 | MS.gene27270:intron | 45.0% | |
| TTAACCAGGACCTTGGAACA+TGG | + | chr1.1:1519626-1519645 | None:intergenic | 45.0% | |
| TTTCGCCTGACGATAAGTTC+CGG | + | chr1.1:1519475-1519494 | None:intergenic | 45.0% | |
| TTTGCAGGTACCATGTTCCA+AGG | - | chr1.1:1519613-1519632 | MS.gene27270:CDS | 45.0% | |
| ! | AAGCTGTTTCAGTCACAAGG+TGG | - | chr1.1:1516492-1516511 | MS.gene27270:intron | 45.0% |
| ! | ATGGCTGTTGGATTAGGTAC+AGG | - | chr1.1:1516744-1516763 | MS.gene27270:intron | 45.0% |
| ! | CCTATTTCCTTTTGCAGGCT+CGG | - | chr1.1:1518685-1518704 | MS.gene27270:intron | 45.0% |
| ! | GTTTGCTAGAAAAGCTGCAC+AGG | + | chr1.1:1517821-1517840 | None:intergenic | 45.0% |
| ! | TTGCTTCATGGTCTTGACCA+TGG | - | chr1.1:1518949-1518968 | MS.gene27270:intron | 45.0% |
| !! | ACAAACAGGTTGGCCTAAAG+GGG | - | chr1.1:1519118-1519137 | MS.gene27270:intron | 45.0% |
| !! | ACACAAACAGGTTGGCCTAA+AGG | - | chr1.1:1519116-1519135 | MS.gene27270:intron | 45.0% |
| !! | ACCTTGTGCCATTTCAACTG+TGG | + | chr1.1:1519222-1519241 | None:intergenic | 45.0% |
| !! | CACAAACAGGTTGGCCTAAA+GGG | - | chr1.1:1519117-1519136 | MS.gene27270:intron | 45.0% |
| !! | TATACTTCAGGGGTGCTTCT+TGG | + | chr1.1:1515737-1515756 | None:intergenic | 45.0% |
| !! | TCTGTTCTGAAACTGATCCC+AGG | + | chr1.1:1516299-1516318 | None:intergenic | 45.0% |
| !!! | GTTGGTTTTAACCAGGACCT+TGG | + | chr1.1:1519633-1519652 | None:intergenic | 45.0% |
| ACTAATTTCGGACGATCGGC+TGG | - | chr1.1:1517440-1517459 | MS.gene27270:CDS | 50.0% | |
| AGGTTTGCGTGCATCATACC+TGG | + | chr1.1:1519008-1519027 | None:intergenic | 50.0% | |
| CATCTGTCCTACAATCAGGG+AGG | + | chr1.1:1517918-1517937 | None:intergenic | 50.0% | |
| CCGAGCCTGCAAAAGGAAAT+AGG | + | chr1.1:1518688-1518707 | None:intergenic | 50.0% | |
| CTAACTCACCACTGGATCTG+GGG | + | chr1.1:1516802-1516821 | None:intergenic | 50.0% | |
| CTATGCCGGAACTTATCGTC+AGG | - | chr1.1:1519467-1519486 | MS.gene27270:CDS | 50.0% | |
| CTCCAAGTGCTCTTCCTTGT+GGG | + | chr1.1:1516689-1516708 | None:intergenic | 50.0% | |
| CTGCTCATGTCCAATGCCAA+TGG | + | chr1.1:1519360-1519379 | None:intergenic | 50.0% | |
| GAGAATGAGTATGGCCCACA+AGG | - | chr1.1:1516672-1516691 | MS.gene27270:intron | 50.0% | |
| GATTAGGTACAGGTGTCCCT+TGG | - | chr1.1:1516754-1516773 | MS.gene27270:intron | 50.0% | |
| GCCAATGGTTCAACTCCATC+AGG | + | chr1.1:1519345-1519364 | None:intergenic | 50.0% | |
| GCCACAGTTGAAATGGCACA+AGG | - | chr1.1:1519218-1519237 | MS.gene27270:CDS | 50.0% | |
| GCTAACTCACCACTGGATCT+GGG | + | chr1.1:1516803-1516822 | None:intergenic | 50.0% | |
| GGACATGAGCAGTATGGGAA+AGG | - | chr1.1:1519368-1519387 | MS.gene27270:intron | 50.0% | |
| GGGAGGATACTTATGGACCA+AGG | + | chr1.1:1517901-1517920 | None:intergenic | 50.0% | |
| GTCCGAAATTAGTTCCTCCG+TGG | + | chr1.1:1517433-1517452 | None:intergenic | 50.0% | |
| GTGGACAGCCTACTCAAAGA+TGG | - | chr1.1:1519508-1519527 | MS.gene27270:intron | 50.0% | |
| TAGGCTGTCCACAACCAACT+TGG | + | chr1.1:1519500-1519519 | None:intergenic | 50.0% | |
| TGGGCTGCAAAAATGGCTGT+TGG | - | chr1.1:1516732-1516751 | MS.gene27270:intron | 50.0% | |
| TGTCCCTTGGGTGATGTGTA+AGG | - | chr1.1:1516767-1516786 | MS.gene27270:intron | 50.0% | |
| TTCCAGCACGTAGGTCGATA+GGG | + | chr1.1:1518751-1518770 | None:intergenic | 50.0% | |
| ! | CTATGGACTGAGTCATGGAG+TGG | - | chr1.1:1517084-1517103 | MS.gene27270:intron | 50.0% |
| ! | CTTTTGCAGGCTCGGCTTTT+GGG | - | chr1.1:1518693-1518712 | MS.gene27270:intron | 50.0% |
| ! | GGCATTGGACATGAGCAGTA+TGG | - | chr1.1:1519362-1519381 | MS.gene27270:intron | 50.0% |
| ! | TGGTCTTGACCATGGACAGA+AGG | - | chr1.1:1518957-1518976 | MS.gene27270:intron | 50.0% |
| !! | CAAACAGGTTGGCCTAAAGG+GGG | - | chr1.1:1519119-1519138 | MS.gene27270:intron | 50.0% |
| !! | GCGAAATGCCAAGTTGGTTG+TGG | - | chr1.1:1519489-1519508 | MS.gene27270:CDS | 50.0% |
| !! | TGTGCCATTTCAACTGTGGC+TGG | + | chr1.1:1519218-1519237 | None:intergenic | 50.0% |
| AATTTCGGACGATCGGCTGG+AGG | - | chr1.1:1517443-1517462 | MS.gene27270:CDS | 55.0% | |
| AGATGATGCCCCAGATCCAG+TGG | - | chr1.1:1516791-1516810 | MS.gene27270:intron | 55.0% | |
| CACATGGACAGCATCACCAG+AGG | + | chr1.1:1518443-1518462 | None:intergenic | 55.0% | |
| CCAAAAGCCGAGCCTGCAAA+AGG | + | chr1.1:1518695-1518714 | None:intergenic | 55.0% | |
| CGAGAAGGCTAACTCACCAC+TGG | + | chr1.1:1516810-1516829 | None:intergenic | 55.0% | |
| CGTCAGGCGAAATGCCAAGT+TGG | - | chr1.1:1519483-1519502 | MS.gene27270:CDS | 55.0% | |
| GCTCCAAGTGCTCTTCCTTG+TGG | + | chr1.1:1516690-1516709 | None:intergenic | 55.0% | |
| GGACTGAGTCATGGAGTGGT+TGG | - | chr1.1:1517088-1517107 | MS.gene27270:intron | 55.0% | |
| GGCTAACTCACCACTGGATC+TGG | + | chr1.1:1516804-1516823 | None:intergenic | 55.0% | |
| GGTACCATGTTCCAAGGTCC+TGG | - | chr1.1:1519619-1519638 | MS.gene27270:CDS | 55.0% | |
| GTTCCAGCACGTAGGTCGAT+AGG | + | chr1.1:1518752-1518771 | None:intergenic | 55.0% | |
| ! | CCTTTTGCAGGCTCGGCTTT+TGG | - | chr1.1:1518692-1518711 | MS.gene27270:intron | 55.0% |
| ! | GGCACTATGACTTGCCTCCT+TGG | - | chr1.1:1517881-1517900 | MS.gene27270:CDS | 55.0% |
| !! | GGAAGAGCACTTGGAGCTTC+TGG | - | chr1.1:1516693-1516712 | MS.gene27270:intron | 55.0% |
| !!! | AGGCTCGGCTTTTGGGACAA+GGG | - | chr1.1:1518700-1518719 | MS.gene27270:intron | 55.0% |
| ! | AGATCCTGCACTGGTCGCTG+GGG | + | chr1.1:1517256-1517275 | None:intergenic | 60.0% |
| ! | GAGATCCTGCACTGGTCGCT+GGG | + | chr1.1:1517257-1517276 | None:intergenic | 60.0% |
| !! | ACAGGTTGGCCTAAAGGGGG+AGG | - | chr1.1:1519122-1519141 | MS.gene27270:intron | 60.0% |
| !! | GGCCCACAAGGAAGAGCACT+TGG | - | chr1.1:1516684-1516703 | MS.gene27270:intron | 60.0% |
| !!! | CAGGCTCGGCTTTTGGGACA+AGG | - | chr1.1:1518699-1518718 | MS.gene27270:intron | 60.0% |
| GCGAACGCGAGATCCTGCAC+TGG | + | chr1.1:1517265-1517284 | None:intergenic | 65.0% | |
| GGCCCTATCGACCTACGTGC+TGG | - | chr1.1:1518746-1518765 | MS.gene27270:intron | 65.0% | |
| ! | CGAGATCCTGCACTGGTCGC+TGG | + | chr1.1:1517258-1517277 | None:intergenic | 65.0% |
| ! | GATCCTGCACTGGTCGCTGG+GGG | + | chr1.1:1517255-1517274 | None:intergenic | 65.0% |
| GAACCCCCAGCGACCAGTGC+AGG | - | chr1.1:1517249-1517268 | MS.gene27270:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 1515578 | 1519779 | 1515578 | ID=MS.gene27270 |
| chr1.1 | mRNA | 1515578 | 1519779 | 1515578 | ID=MS.gene27270.t1;Parent=MS.gene27270 |
| chr1.1 | exon | 1519606 | 1519779 | 1519606 | ID=MS.gene27270.t1.exon1;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1519606 | 1519779 | 1519606 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1519420 | 1519515 | 1519420 | ID=MS.gene27270.t1.exon2;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1519420 | 1519515 | 1519420 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1519188 | 1519300 | 1519188 | ID=MS.gene27270.t1.exon3;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1519188 | 1519300 | 1519188 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1519023 | 1519089 | 1519023 | ID=MS.gene27270.t1.exon4;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1519023 | 1519089 | 1519023 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1518824 | 1518916 | 1518824 | ID=MS.gene27270.t1.exon5;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1518824 | 1518916 | 1518824 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1518545 | 1518688 | 1518545 | ID=MS.gene27270.t1.exon6;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1518545 | 1518688 | 1518545 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1518248 | 1518336 | 1518248 | ID=MS.gene27270.t1.exon7;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1518248 | 1518336 | 1518248 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1518024 | 1518129 | 1518024 | ID=MS.gene27270.t1.exon8;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1518024 | 1518129 | 1518024 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1517842 | 1517929 | 1517842 | ID=MS.gene27270.t1.exon9;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1517842 | 1517929 | 1517842 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1517640 | 1517758 | 1517640 | ID=MS.gene27270.t1.exon10;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1517640 | 1517758 | 1517640 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1517403 | 1517564 | 1517403 | ID=MS.gene27270.t1.exon11;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1517403 | 1517564 | 1517403 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1517128 | 1517306 | 1517128 | ID=MS.gene27270.t1.exon12;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1517128 | 1517306 | 1517128 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1516867 | 1516982 | 1516867 | ID=MS.gene27270.t1.exon13;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1516867 | 1516982 | 1516867 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1516546 | 1516655 | 1516546 | ID=MS.gene27270.t1.exon14;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1516546 | 1516655 | 1516546 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1516349 | 1516459 | 1516349 | ID=MS.gene27270.t1.exon15;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1516349 | 1516459 | 1516349 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1516118 | 1516231 | 1516118 | ID=MS.gene27270.t1.exon16;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1516118 | 1516231 | 1516118 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1515828 | 1516030 | 1515828 | ID=MS.gene27270.t1.exon17;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1515828 | 1516030 | 1515828 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| chr1.1 | exon | 1515578 | 1515737 | 1515578 | ID=MS.gene27270.t1.exon18;Parent=MS.gene27270.t1 |
| chr1.1 | CDS | 1515578 | 1515737 | 1515578 | ID=cds.MS.gene27270.t1;Parent=MS.gene27270.t1 |
| Gene Sequence |
| Protein sequence |
