Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27786.t1 | XP_024639923.1 | 69.6 | 283 | 65 | 2 | 4 | 286 | 81 | 342 | 2.80E-100 | 375.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27786.t1 | A0A396I0R2 | 62.5 | 288 | 67 | 4 | 2 | 286 | 237 | 486 | 3.9e-80 | 307.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05351 | MS.gene27786 | 0.949644 | 8.39E-108 | -1.69E-46 |
| MS.gene057814 | MS.gene27786 | 0.976429 | 8.29E-142 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene27786.t1 | MTR_0029s0140 | 82.639 | 144 | 25 | 0 | 132 | 275 | 241 | 384 | 3.95e-72 | 227 |
| MS.gene27786.t1 | MTR_2g102860 | 82.734 | 139 | 24 | 0 | 140 | 278 | 13 | 151 | 1.55e-71 | 218 |
| MS.gene27786.t1 | MTR_5g080310 | 79.195 | 149 | 27 | 1 | 134 | 282 | 122 | 266 | 2.43e-70 | 218 |
| MS.gene27786.t1 | MTR_4g017750 | 82.517 | 143 | 21 | 1 | 133 | 275 | 110 | 248 | 2.93e-70 | 218 |
| MS.gene27786.t1 | MTR_2g020090 | 68.153 | 157 | 49 | 1 | 119 | 275 | 49 | 204 | 1.08e-69 | 215 |
| MS.gene27786.t1 | MTR_3g058800 | 72.535 | 142 | 38 | 1 | 134 | 275 | 10 | 150 | 4.44e-68 | 209 |
| MS.gene27786.t1 | MTR_6g463490 | 82.906 | 117 | 20 | 0 | 162 | 278 | 3 | 119 | 4.11e-66 | 202 |
| MS.gene27786.t1 | MTR_1g023240 | 75.658 | 152 | 31 | 1 | 121 | 272 | 23 | 168 | 8.62e-65 | 204 |
| MS.gene27786.t1 | MTR_4g023110 | 73.134 | 134 | 35 | 1 | 132 | 265 | 7 | 139 | 4.26e-63 | 195 |
| MS.gene27786.t1 | MTR_8g027455 | 54.140 | 157 | 63 | 4 | 132 | 282 | 23 | 176 | 1.09e-43 | 154 |
| MS.gene27786.t1 | MTR_1g077650 | 66.346 | 104 | 34 | 1 | 133 | 236 | 46 | 148 | 2.42e-41 | 141 |
| MS.gene27786.t1 | MTR_7g037680 | 29.858 | 211 | 116 | 5 | 45 | 254 | 17 | 196 | 7.35e-22 | 92.4 |
| MS.gene27786.t1 | MTR_5g053700 | 80.000 | 50 | 6 | 1 | 226 | 275 | 1 | 46 | 2.61e-19 | 80.1 |
| MS.gene27786.t1 | MTR_2g077640 | 28.837 | 215 | 113 | 6 | 2 | 214 | 34 | 210 | 2.15e-18 | 82.8 |
| MS.gene27786.t1 | MTR_7g035425 | 40.426 | 94 | 54 | 2 | 1 | 92 | 247 | 340 | 3.18e-16 | 77.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATAATAAACAAAATA+AGG | - | 8583:23687-23706 | MS.gene27786:intergenic | 10.0% |
| !! | ACAATCTAAATTAAATGATA+TGG | - | 8583:22689-22708 | MS.gene27786:intergenic | 15.0% |
| !!! | ATTTTTTTTAATTCGAATTG+TGG | + | 8583:22944-22963 | MS.gene27786:intron | 15.0% |
| !!! | TATTTTGTTATTATTTGAAC+AGG | + | 8583:23780-23799 | MS.gene27786:intron | 15.0% |
| !! | AATTCGAATTAAAAAAGTTG+GGG | - | 8583:22975-22994 | MS.gene27786:intergenic | 20.0% |
| !! | ACAATTCGAATTAAAAAAGT+TGG | - | 8583:22977-22996 | MS.gene27786:intergenic | 20.0% |
| !! | ATAAATTCATAAGCAATAAC+AGG | - | 8583:23086-23105 | MS.gene27786:intergenic | 20.0% |
| !! | CAATTCGAATTAAAAAAGTT+GGG | - | 8583:22976-22995 | MS.gene27786:intergenic | 20.0% |
| !! | TAAATTCATAAGCAATAACA+GGG | - | 8583:23085-23104 | MS.gene27786:intergenic | 20.0% |
| !! | TATAAAGATTAAGAACACAT+TGG | - | 8583:23514-23533 | MS.gene27786:intergenic | 20.0% |
| !!! | AAGCCTTATAATATCTATTT+AGG | - | 8583:23214-23233 | MS.gene27786:intergenic | 20.0% |
| !!! | TTTTATTTCTTGTGACAAAT+AGG | + | 8583:22726-22745 | MS.gene27786:intron | 20.0% |
| ! | AAAATATTTAAGGACAGAAC+TGG | - | 8583:23766-23785 | MS.gene27786:intergenic | 25.0% |
| ! | AAGGAAACTAATCATAAGAA+TGG | - | 8583:23668-23687 | MS.gene27786:intergenic | 25.0% |
| ! | GAAAACTATATAGAATCAAG+TGG | - | 8583:23425-23444 | MS.gene27786:intergenic | 25.0% |
| ! | TGGCCTAAATAGATATTATA+AGG | + | 8583:23208-23227 | MS.gene27786:intron | 25.0% |
| ! | TTTATGTTATAGATGTCTTG+CGG | + | 8583:23101-23120 | MS.gene27786:intron | 25.0% |
| !! | TAGAATTTAGAACTTATCAC+AGG | + | 8583:23479-23498 | MS.gene27786:intron | 25.0% |
| !!! | TTTGTTATTATTTGAACAGG+AGG | + | 8583:23783-23802 | MS.gene27786:intron | 25.0% |
| AAAACGCACAAAAATAAGTC+CGG | + | 8583:22793-22812 | MS.gene27786:CDS | 30.0% | |
| AAAACTGAGTACTAAGGTAA+GGG | - | 8583:23243-23262 | MS.gene27786:intergenic | 30.0% | |
| AAAGTCGATTAAAATTACCG+CGG | - | 8583:23041-23060 | MS.gene27786:intergenic | 30.0% | |
| AATAACAGAGAAACAGTGTA+AGG | - | 8583:23736-23755 | MS.gene27786:intergenic | 30.0% | |
| TGCTGAATTGGTTAAGTATT+GGG | + | 8583:22518-22537 | MS.gene27786:CDS | 30.0% | |
| TTAACCAATTCAGCAAAGAT+AGG | - | 8583:22513-22532 | MS.gene27786:intergenic | 30.0% | |
| TTGCTGAATTGGTTAAGTAT+TGG | + | 8583:22517-22536 | MS.gene27786:CDS | 30.0% | |
| ! | TTTTCTTGCAATCACATAAC+AGG | - | 8583:23602-23621 | MS.gene27786:intergenic | 30.0% |
| !! | TTTTAATTCGAATTGTGGTC+TGG | + | 8583:22949-22968 | MS.gene27786:intron | 30.0% |
| !!! | AACTTTTTTCCAAGTGTTGA+AGG | - | 8583:23869-23888 | MS.gene27786:intergenic | 30.0% |
| AACACTTGGAAAAAAGTTGC+TGG | + | 8583:23871-23890 | MS.gene27786:CDS | 35.0% | |
| AAGAAGAAGGGAAAGCTATA+CGG | + | 8583:23898-23917 | MS.gene27786:CDS | 35.0% | |
| AAGATTAAGAACACATTGGC+TGG | - | 8583:23510-23529 | MS.gene27786:intergenic | 35.0% | |
| AATGACAAACAAGACAGAAC+TGG | - | 8583:22918-22937 | MS.gene27786:intergenic | 35.0% | |
| ATTCTTTGACCTTCAACACT+TGG | + | 8583:23857-23876 | MS.gene27786:CDS | 35.0% | |
| CAAAACTGAGTACTAAGGTA+AGG | - | 8583:23244-23263 | MS.gene27786:intergenic | 35.0% | |
| GGCAAGTTGTAATTGCTTAT+AGG | - | 8583:23576-23595 | MS.gene27786:intergenic | 35.0% | |
| TCAACATTGGGACTTAAAAG+CGG | - | 8583:24195-24214 | MS.gene27786:intergenic | 35.0% | |
| TCGTGAAGCTCGTTAATAAA+CGG | - | 8583:22772-22791 | MS.gene27786:intergenic | 35.0% | |
| TTAATTGCTCTTGCGTCAAA+CGG | - | 8583:24050-24069 | MS.gene27786:intergenic | 35.0% | |
| TTGCAATCACATAACAGGTT+TGG | - | 8583:23597-23616 | MS.gene27786:intergenic | 35.0% | |
| TTTCTTGTGACAAATAGGCT+AGG | + | 8583:22731-22750 | MS.gene27786:intron | 35.0% | |
| ! | AAGATTTGCTTAACCGTCAA+AGG | + | 8583:24103-24122 | MS.gene27786:CDS | 35.0% |
| ! | TACCTTAGTACTCAGTTTTG+TGG | + | 8583:23244-23263 | MS.gene27786:intron | 35.0% |
| !! | ACCTTAGTACTCAGTTTTGT+GGG | + | 8583:23245-23264 | MS.gene27786:intron | 35.0% |
| !! | ATGATTGAGGGTTAGTCTTA+GGG | - | 8583:23971-23990 | MS.gene27786:intergenic | 35.0% |
| !! | CGACTTTGTTGATTCTTACA+AGG | + | 8583:23054-23073 | MS.gene27786:intron | 35.0% |
| !! | GTTCTGTCTTGTTTGTCATT+TGG | + | 8583:22918-22937 | MS.gene27786:intron | 35.0% |
| !!! | GCACTATTTTTGTTGCAGTT+TGG | + | 8583:22890-22909 | MS.gene27786:intron | 35.0% |
| ACCAATTCAGCAAAGATAGG+CGG | - | 8583:22510-22529 | MS.gene27786:intergenic | 40.0% | |
| AGACCCATTAGAAATAGCCT+CGG | - | 8583:23827-23846 | MS.gene27786:intergenic | 40.0% | |
| AGAGCAATTAACGCAACAGA+TGG | + | 8583:24059-24078 | MS.gene27786:CDS | 40.0% | |
| ATCATACTGCAGAATGCACA+TGG | - | 8583:23378-23397 | MS.gene27786:intergenic | 40.0% | |
| ATTTAAGGACAGAACTGGCA+AGG | - | 8583:23761-23780 | MS.gene27786:intergenic | 40.0% | |
| CAACAAAGCAAAGAAGAACC+GGG | + | 8583:22566-22585 | MS.gene27786:CDS | 40.0% | |
| CCAACAAAGCAAAGAAGAAC+CGG | + | 8583:22565-22584 | MS.gene27786:CDS | 40.0% | |
| CTAAGACTAACCCTCAATCA+TGG | + | 8583:23970-23989 | MS.gene27786:CDS | 40.0% | |
| GAAGGTGATGAATGATACAG+AGG | - | 8583:23140-23159 | MS.gene27786:intergenic | 40.0% | |
| TAACCCTCAATCATGGTGAA+GGG | + | 8583:23977-23996 | MS.gene27786:CDS | 40.0% | |
| TAACCGTCAAAGGTCATATG+AGG | + | 8583:24113-24132 | MS.gene27786:CDS | 40.0% | |
| TCCCACAAAACTGAGTACTA+AGG | - | 8583:23249-23268 | MS.gene27786:intergenic | 40.0% | |
| TCTATTTAGGCCATGTCTCT+AGG | - | 8583:23201-23220 | MS.gene27786:intergenic | 40.0% | |
| TGTCTCTAGGCAATGAAGAA+CGG | - | 8583:23188-23207 | MS.gene27786:intergenic | 40.0% | |
| TTAAAATTACCGCGGACAGA+TGG | - | 8583:23033-23052 | MS.gene27786:intergenic | 40.0% | |
| TTCTTCATTGCCTAGAGACA+TGG | + | 8583:23188-23207 | MS.gene27786:intron | 40.0% | |
| ! | CTTGTCGTATCTCTCAGTTT+TGG | + | 8583:22855-22874 | MS.gene27786:intron | 40.0% |
| !! | CATGATTGAGGGTTAGTCTT+AGG | - | 8583:23972-23991 | MS.gene27786:intergenic | 40.0% |
| !! | TTGCCGAGGCTATTTCTAAT+GGG | + | 8583:23821-23840 | MS.gene27786:CDS | 40.0% |
| AAGGGAAAGCTATACGGTCT+TGG | + | 8583:23904-23923 | MS.gene27786:CDS | 45.0% | |
| AATAGGCTAGGAGGTTACGT+CGG | + | 8583:22743-22762 | MS.gene27786:intron | 45.0% | |
| ACCGGATAAGGGTCAACATT+GGG | - | 8583:24207-24226 | MS.gene27786:intergenic | 45.0% | |
| ACTGGTGGTTGCTTAAGCAA+CGG | + | 8583:22615-22634 | MS.gene27786:CDS | 45.0% | |
| AGTTGCTGGAGACAAGAAGA+AGG | + | 8583:23885-23904 | MS.gene27786:CDS | 45.0% | |
| CCAATTCAGCAAAGATAGGC+GGG | - | 8583:22509-22528 | MS.gene27786:intergenic | 45.0% | |
| CCGGTTCTTCTTTGCTTTGT+TGG | - | 8583:22568-22587 | MS.gene27786:intergenic | 45.0% | |
| CTAACCCTCAATCATGGTGA+AGG | + | 8583:23976-23995 | MS.gene27786:CDS | 45.0% | |
| CTTGTGACAAATAGGCTAGG+AGG | + | 8583:22734-22753 | MS.gene27786:intron | 45.0% | |
| GCTCCTCATATGACCTTTGA+CGG | - | 8583:24119-24138 | MS.gene27786:intergenic | 45.0% | |
| GGATGATGAGGATCATGATG+AGG | + | 8583:24236-24255 | MS.gene27786:CDS | 45.0% | |
| GGTTTGAGGAGACAAGAAAG+CGG | + | 8583:22469-22488 | MS.gene27786:CDS | 45.0% | |
| GTAACTTGGCTGCTAACTAC+CGG | + | 8583:23926-23945 | MS.gene27786:CDS | 45.0% | |
| GTTGCTGGAGACAAGAAGAA+GGG | + | 8583:23886-23905 | MS.gene27786:CDS | 45.0% | |
| TACCGGATAAGGGTCAACAT+TGG | - | 8583:24208-24227 | MS.gene27786:intergenic | 45.0% | |
| TACTTAGAAGAGCCCGTATG+CGG | + | 8583:22448-22467 | MS.gene27786:CDS | 45.0% | |
| TAGATGTCTTGCGGCAACTT+TGG | + | 8583:23110-23129 | MS.gene27786:intron | 45.0% | |
| TCATCATCCTCCTCATCTAC+CGG | - | 8583:24225-24244 | MS.gene27786:intergenic | 45.0% | |
| TCCCAATGTTGACCCTTATC+CGG | + | 8583:24203-24222 | MS.gene27786:CDS | 45.0% | |
| TTGATGCAACACTACCCTTC+CGG | - | 8583:23948-23967 | MS.gene27786:intergenic | 45.0% | |
| TTGTCTCCTCAAACCGCATA+CGG | - | 8583:22464-22483 | MS.gene27786:intergenic | 45.0% | |
| ! | GCTATACGGTCTTGGTAACT+TGG | + | 8583:23912-23931 | MS.gene27786:CDS | 45.0% |
| ! | TTGAACAGGAGGAGTATGAC+CGG | + | 8583:23794-23813 | MS.gene27786:intron | 45.0% |
| !! | CTTGCCGAGGCTATTTCTAA+TGG | + | 8583:23820-23839 | MS.gene27786:CDS | 45.0% |
| !! | AAATAATAACAAAATATTTA+AGG | - | 8583:23776-23795 | MS.gene27786:intergenic | 5.0% |
| AAGGGAGGATGCATTCACAC+TGG | + | 8583:22597-22616 | MS.gene27786:CDS | 50.0% | |
| AAGGTCATATGAGGAGCAGC+TGG | + | 8583:24122-24141 | MS.gene27786:CDS | 50.0% | |
| AATTACCGCGGACAGATGGT+TGG | - | 8583:23029-23048 | MS.gene27786:intergenic | 50.0% | |
| AGAAAGCGGCCACATTGGAT+TGG | + | 8583:22483-22502 | MS.gene27786:CDS | 50.0% | |
| AGACAAGAAAGCGGCCACAT+TGG | + | 8583:22478-22497 | MS.gene27786:CDS | 50.0% | |
| AGGACCCTTCACCATGATTG+AGG | - | 8583:23984-24003 | MS.gene27786:intergenic | 50.0% | |
| ATAGGCTAGGAGGTTACGTC+GGG | + | 8583:22744-22763 | MS.gene27786:intron | 50.0% | |
| CACAGCTTCCCAAGAACACT+TGG | - | 8583:22370-22389 | MS.gene27786:intergenic | 50.0% | |
| CCCGCCTATCTTTGCTGAAT+TGG | + | 8583:22506-22525 | MS.gene27786:CDS | 50.0% | |
| CCTCCTCATCTACCGGATAA+GGG | - | 8583:24218-24237 | MS.gene27786:intergenic | 50.0% | |
| CCTTCATCATGACACGTGAG+CGG | + | 8583:23155-23174 | MS.gene27786:intron | 50.0% | |
| GCAACAGATGGCAAGTCAAG+CGG | + | 8583:24071-24090 | MS.gene27786:CDS | 50.0% | |
| GGACCCTTCACCATGATTGA+GGG | - | 8583:23983-24002 | MS.gene27786:intergenic | 50.0% | |
| GGTAGATGAGGAGGATGATG+AGG | + | 8583:24224-24243 | MS.gene27786:CDS | 50.0% | |
| TAAAAGCGGCGCACTAGTGT+GGG | - | 8583:24181-24200 | MS.gene27786:intergenic | 50.0% | |
| TCCTCCTCATCTACCGGATA+AGG | - | 8583:24219-24238 | MS.gene27786:intergenic | 50.0% | |
| TGAATAAGCTCCCGCATCTC+TGG | - | 8583:24027-24046 | MS.gene27786:intergenic | 50.0% | |
| TGACCCTTATCCGGTAGATG+AGG | + | 8583:24212-24231 | MS.gene27786:CDS | 50.0% | |
| TGTCTCCTCAAACCGCATAC+GGG | - | 8583:22463-22482 | MS.gene27786:intergenic | 50.0% | |
| TTAAAAGCGGCGCACTAGTG+TGG | - | 8583:24182-24201 | MS.gene27786:intergenic | 50.0% | |
| TTGGCTGCTAACTACCGGAA+GGG | + | 8583:23931-23950 | MS.gene27786:CDS | 50.0% | |
| ! | CAGAGCTGCTGCACGTTTTT+CGG | + | 8583:22422-22441 | MS.gene27786:CDS | 50.0% |
| !! | GGTTAAGTATTGGGCGTCTG+AGG | + | 8583:22527-22546 | MS.gene27786:CDS | 50.0% |
| AAATAGCCTCGGCAAGCTGC+CGG | - | 8583:23816-23835 | MS.gene27786:intergenic | 55.0% | |
| AAGAGCCCGTATGCGGTTTG+AGG | + | 8583:22455-22474 | MS.gene27786:CDS | 55.0% | |
| AATACTGCGACGAGCGTGCT+AGG | + | 8583:22818-22837 | MS.gene27786:CDS | 55.0% | |
| AGCAAAGAAGAACCGGGCGT+CGG | + | 8583:22572-22591 | MS.gene27786:CDS | 55.0% | |
| AGGAGCAGCTGGCACAGTTT+AGG | + | 8583:24133-24152 | MS.gene27786:CDS | 55.0% | |
| ATAGGCGGGCCAATCCAATG+TGG | - | 8583:22495-22514 | MS.gene27786:intergenic | 55.0% | |
| CCCTTATCCGGTAGATGAGG+AGG | + | 8583:24215-24234 | MS.gene27786:CDS | 55.0% | |
| CCGCTCACGTGTCATGATGA+AGG | - | 8583:23158-23177 | MS.gene27786:intergenic | 55.0% | |
| CTCCATGCTCAGATCAGACG+CGG | - | 8583:23283-23302 | MS.gene27786:intergenic | 55.0% | |
| CTTGGCTGCTAACTACCGGA+AGG | + | 8583:23930-23949 | MS.gene27786:CDS | 55.0% | |
| GGAGGATGCATTCACACTGG+TGG | + | 8583:22600-22619 | MS.gene27786:CDS | 55.0% | |
| TAGCACGCTCGTCGCAGTAT+TGG | - | 8583:22819-22838 | MS.gene27786:intergenic | 55.0% | |
| TGCATCCAACCATCTGTCCG+CGG | + | 8583:23021-23040 | MS.gene27786:intron | 55.0% | |
| TTTAGGCAAGCCCAGGCTCA+AGG | + | 8583:24150-24169 | MS.gene27786:CDS | 55.0% | |
| !! | AAGAACCGGGCGTCGGAAAA+GGG | + | 8583:22579-22598 | MS.gene27786:CDS | 55.0% |
| AGCCGCGTCTGATCTGAGCA+TGG | + | 8583:23278-23297 | MS.gene27786:intron | 60.0% | |
| CGCGTCTGATCTGAGCATGG+AGG | + | 8583:23281-23300 | MS.gene27786:intron | 60.0% | |
| CTGAGCTGACGCCAGAGATG+CGG | + | 8583:24013-24032 | MS.gene27786:CDS | 60.0% | |
| GGCACAGTTTAGGCAAGCCC+AGG | + | 8583:24143-24162 | MS.gene27786:CDS | 60.0% | |
| TGAGCTGACGCCAGAGATGC+GGG | + | 8583:24014-24033 | MS.gene27786:CDS | 60.0% | |
| ! | ATCCTCCCTTTTCCGACGCC+CGG | - | 8583:22587-22606 | MS.gene27786:intergenic | 60.0% |
| ! | TTGGGCGTCTGAGGCGTTCA+AGG | + | 8583:22536-22555 | MS.gene27786:CDS | 60.0% |
| !! | ACGCTCGTCGCAGTATTGGC+CGG | - | 8583:22815-22834 | MS.gene27786:intergenic | 60.0% |
| !! | GAAGAACCGGGCGTCGGAAA+AGG | + | 8583:22578-22597 | MS.gene27786:CDS | 60.0% |
| AAGCGGCGCACTAGTGTGGG+AGG | - | 8583:24178-24197 | MS.gene27786:intergenic | 65.0% | |
| AGCGGCGCACTAGTGTGGGA+GGG | - | 8583:24177-24196 | MS.gene27786:intergenic | 65.0% | |
| CGCATCTCTGGCGTCAGCTC+AGG | - | 8583:24015-24034 | MS.gene27786:intergenic | 65.0% | |
| GTATGACCGGCAGCTTGCCG+AGG | + | 8583:23807-23826 | MS.gene27786:CDS | 65.0% | |
| GTGGGAGGGACCTTGAGCCT+GGG | - | 8583:24163-24182 | MS.gene27786:intergenic | 65.0% | |
| TGGCGTCAGCTCAGGCTGCT+GGG | - | 8583:24007-24026 | MS.gene27786:intergenic | 65.0% | |
| TGTGGGAGGGACCTTGAGCC+TGG | - | 8583:24164-24183 | MS.gene27786:intergenic | 65.0% | |
| ! | CGAGCGTGCTAGGAGTGTGC+AGG | + | 8583:22828-22847 | MS.gene27786:CDS | 65.0% |
| ! | CGGAGAGCACGCTGAGCGTA+TGG | + | 8583:22635-22654 | MS.gene27786:CDS | 65.0% |
| !! | AACCGGGCGTCGGAAAAGGG+AGG | + | 8583:22582-22601 | MS.gene27786:CDS | 65.0% |
| CGTCAGCTCAGGCTGCTGGG+AGG | - | 8583:24004-24023 | MS.gene27786:intergenic | 70.0% | |
| CTGGCGTCAGCTCAGGCTGC+TGG | - | 8583:24008-24027 | MS.gene27786:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8583 | gene | 22360 | 24263 | 22360 | ID=MS.gene27786 |
| 8583 | mRNA | 22360 | 24263 | 22360 | ID=MS.gene27786.t1;Parent=MS.gene27786 |
| 8583 | exon | 22360 | 22656 | 22360 | ID=MS.gene27786.t1.exon1;Parent=MS.gene27786.t1 |
| 8583 | CDS | 22360 | 22656 | 22360 | ID=cds.MS.gene27786.t1;Parent=MS.gene27786.t1 |
| 8583 | exon | 22748 | 22849 | 22748 | ID=MS.gene27786.t1.exon2;Parent=MS.gene27786.t1 |
| 8583 | CDS | 22748 | 22849 | 22748 | ID=cds.MS.gene27786.t1;Parent=MS.gene27786.t1 |
| 8583 | exon | 23802 | 24263 | 23802 | ID=MS.gene27786.t1.exon3;Parent=MS.gene27786.t1 |
| 8583 | CDS | 23802 | 24263 | 23802 | ID=cds.MS.gene27786.t1;Parent=MS.gene27786.t1 |
| Gene Sequence |
| Protein sequence |
