Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057814.t1 | XP_024627930.1 | 65.1 | 447 | 130 | 4 | 1 | 440 | 1 | 428 | 9.30E-134 | 487.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057814.t1 | A0A396I0R2 | 64.6 | 525 | 119 | 7 | 1 | 512 | 1 | 471 | 1.5e-130 | 476.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05351 | MS.gene057814 | 0.935726 | 5.39E-97 | -1.69E-46 |
| MS.gene057814 | MS.gene27786 | 0.976429 | 8.29E-142 | -1.69E-46 |
| MS.gene057814 | MS.gene27788 | 0.987546 | 1.19E-170 | -1.69E-46 |
| MS.gene057814 | MS.gene43647 | 0.942941 | 2.94E-102 | -1.69E-46 |
| MS.gene057814 | MS.gene52131 | 0.955524 | 2.48E-113 | -1.69E-46 |
| MS.gene057814 | MS.gene67335 | 0.887265 | 1.66E-72 | -1.69E-46 |
| MS.gene057814 | MS.gene72807 | 0.8184 | 2.00E-52 | -1.69E-46 |
| MS.gene057814 | MS.gene80973 | 0.835031 | 2.13E-56 | -1.69E-46 |
| MS.gene057814 | MS.gene82123 | 0.833091 | 6.51E-56 | -1.69E-46 |
| MS.gene057814 | MS.gene87215 | 0.837321 | 5.57E-57 | -1.69E-46 |
| MS.gene057814 | MS.gene91000 | 0.891188 | 4.99E-74 | -1.69E-46 |
| MS.gene057814 | MS.gene91719 | 0.835075 | 2.07E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene057814.t1 | MTR_1g023240 | 73.099 | 171 | 30 | 2 | 359 | 529 | 23 | 177 | 2.02e-67 | 219 |
| MS.gene057814.t1 | MTR_0029s0140 | 82.517 | 143 | 25 | 0 | 370 | 512 | 241 | 383 | 7.71e-67 | 221 |
| MS.gene057814.t1 | MTR_0029s0140 | 82.051 | 78 | 14 | 0 | 162 | 239 | 162 | 239 | 3.60e-41 | 153 |
| MS.gene057814.t1 | MTR_2g020090 | 68.590 | 156 | 48 | 1 | 357 | 512 | 49 | 203 | 4.46e-66 | 214 |
| MS.gene057814.t1 | MTR_4g017750 | 82.394 | 142 | 21 | 1 | 371 | 512 | 110 | 247 | 5.91e-66 | 215 |
| MS.gene057814.t1 | MTR_2g102860 | 82.963 | 135 | 23 | 0 | 378 | 512 | 13 | 147 | 7.85e-66 | 211 |
| MS.gene057814.t1 | MTR_3g058800 | 73.050 | 141 | 37 | 1 | 372 | 512 | 10 | 149 | 2.76e-64 | 207 |
| MS.gene057814.t1 | MTR_5g080310 | 80.851 | 141 | 23 | 1 | 372 | 512 | 122 | 258 | 2.96e-63 | 208 |
| MS.gene057814.t1 | MTR_6g463490 | 83.186 | 113 | 19 | 0 | 400 | 512 | 3 | 115 | 8.84e-61 | 196 |
| MS.gene057814.t1 | MTR_4g023110 | 73.134 | 134 | 35 | 1 | 370 | 503 | 7 | 139 | 2.31e-60 | 196 |
| MS.gene057814.t1 | MTR_8g027455 | 61.290 | 124 | 46 | 2 | 371 | 493 | 24 | 146 | 7.78e-42 | 155 |
| MS.gene057814.t1 | MTR_1g077650 | 66.346 | 104 | 34 | 1 | 371 | 474 | 46 | 148 | 7.45e-40 | 143 |
| MS.gene057814.t1 | MTR_7g035425 | 37.576 | 165 | 88 | 5 | 178 | 330 | 179 | 340 | 5.49e-24 | 103 |
| MS.gene057814.t1 | MTR_7g037680 | 29.858 | 211 | 116 | 5 | 283 | 492 | 17 | 196 | 8.54e-20 | 89.4 |
| MS.gene057814.t1 | MTR_2g077640 | 29.032 | 217 | 110 | 7 | 240 | 452 | 34 | 210 | 8.00e-18 | 84.0 |
| MS.gene057814.t1 | MTR_5g053700 | 81.250 | 48 | 5 | 1 | 464 | 511 | 1 | 44 | 1.19e-17 | 77.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 172 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGCTGGTTTAGGCTCTTTC+AGG | 0.183435 | 4.4:+36782740 | MS.gene057814:CDS |
| CATGATTGAGGGTTAGTCTT+AGG | 0.184506 | 4.4:-36784455 | None:intergenic |
| TGTGGGAGGGACCTTGAGCC+TGG | 0.232485 | 4.4:-36784647 | None:intergenic |
| TGGAGGGATTTGTTGTTGTT+GGG | 0.261186 | 4.4:-36782307 | None:intergenic |
| GTGGAGGGATTTGTTGTTGT+TGG | 0.265730 | 4.4:-36782308 | None:intergenic |
| CCCGCCTATCTTTGCTGAAT+TGG | 0.275847 | 4.4:+36782992 | MS.gene057814:CDS |
| CTGGCGTCAGCTCAGGCTGC+TGG | 0.280344 | 4.4:-36784491 | None:intergenic |
| GGGATTTGTTGTAGGGAAAA+AGG | 0.280844 | 4.4:-36782342 | None:intergenic |
| CCGGTTCTTCTTTGCTTTGT+TGG | 0.290328 | 4.4:-36783051 | None:intergenic |
| TATGGCACCATACCTCCTTA+TGG | 0.295998 | 4.4:+36782219 | MS.gene057814:CDS |
| TGCTGAATTGGTTAAGTATT+GGG | 0.296855 | 4.4:+36783004 | MS.gene057814:CDS |
| ATAACTGCTATCATCACTTT+TGG | 0.303053 | 4.4:+36782682 | MS.gene057814:CDS |
| TTGCTCTTTCCATCAGGTTT+CGG | 0.314043 | 4.4:-36781973 | None:intergenic |
| CTCTTCGTCGATTCATCTTA+AGG | 0.337179 | 4.4:+36782523 | MS.gene057814:CDS |
| TAATGCAGACCAAGTGTTCT+TGG | 0.346146 | 4.4:+36782844 | MS.gene057814:intron |
| CTTGCCGAGGCTATTTCTAA+TGG | 0.350981 | 4.4:+36784306 | MS.gene057814:CDS |
| CCAGTACATCCTGGATATTA+TGG | 0.365206 | 4.4:+36782201 | MS.gene057814:CDS |
| TCCTCCTCATCTACCGGATA+AGG | 0.372127 | 4.4:-36784702 | None:intergenic |
| TCTTCTAGCCAGGGATCACC+TGG | 0.378638 | 4.4:+36782111 | MS.gene057814:CDS |
| GGATTTGTTGTTGTTGGGGA+AGG | 0.379887 | 4.4:-36782302 | None:intergenic |
| CGCATCTCTGGCGTCAGCTC+AGG | 0.380128 | 4.4:-36784498 | None:intergenic |
| TTGCCCTTGCTCTTTCCATC+AGG | 0.384668 | 4.4:-36781979 | None:intergenic |
| ATGATTGAGGGTTAGTCTTA+GGG | 0.390145 | 4.4:-36784454 | None:intergenic |
| AGAGAATCTCTCGGATAATC+CGG | 0.395614 | 4.4:-36782504 | None:intergenic |
| ATTTGTTGTTGTTGGGGAAG+GGG | 0.399109 | 4.4:-36782300 | None:intergenic |
| TTGTCTCCTCAAACCGCATA+CGG | 0.400455 | 4.4:-36782947 | None:intergenic |
| CGCCTGACATCTTTCTGAAA+AGG | 0.400793 | 4.4:+36785143 | MS.gene057814:CDS |
| TTGCTGAATTGGTTAAGTAT+TGG | 0.403286 | 4.4:+36783003 | MS.gene057814:CDS |
| AGGAGCAGCTGGCACAGTTT+AGG | 0.406187 | 4.4:+36784619 | MS.gene057814:CDS |
| CCAACAAAGCAAAGAAGAAC+CGG | 0.408497 | 4.4:+36783051 | MS.gene057814:CDS |
| AAGATGTCAGGCGCTTTGCC+AGG | 0.410903 | 4.4:-36785133 | None:intergenic |
| ATCTGCTGCATCTTCTAGCC+AGG | 0.410992 | 4.4:+36782101 | MS.gene057814:CDS |
| GTTGTTGTTGGGGAAGGGGA+AGG | 0.412477 | 4.4:-36782296 | None:intergenic |
| GAAGAACCGGGCGTCGGAAA+AGG | 0.413034 | 4.4:+36783064 | MS.gene057814:CDS |
| GCTATACGGTCTTGGTAACT+TGG | 0.413255 | 4.4:+36784398 | MS.gene057814:CDS |
| GATTGCTTCAGCAGCCGGTT+TGG | 0.416531 | 4.4:-36782646 | None:intergenic |
| TGTTGTTGTTGGGGTTGTGG+TGG | 0.418549 | 4.4:-36782405 | None:intergenic |
| TGAATATGGTGGTAAATGAT+AGG | 0.419203 | 4.4:-36782259 | None:intergenic |
| GTTGTTGTTGGGGTTGTGGT+GGG | 0.422252 | 4.4:-36782404 | None:intergenic |
| TGAATAAGCTCCCGCATCTC+TGG | 0.423368 | 4.4:-36784510 | None:intergenic |
| ATGGCACCATACCTCCTTAT+GGG | 0.425132 | 4.4:+36782220 | MS.gene057814:CDS |
| GTTGTGGAGGGATTTGTTGT+AGG | 0.427635 | 4.4:-36782350 | None:intergenic |
| AATGCAGACCAAGTGTTCTT+GGG | 0.435174 | 4.4:+36782845 | MS.gene057814:intron |
| TTGCCGAGGCTATTTCTAAT+GGG | 0.436783 | 4.4:+36784307 | MS.gene057814:CDS |
| TGAGCTGACGCCAGAGATGC+GGG | 0.441007 | 4.4:+36784500 | MS.gene057814:CDS |
| CCTCCTCATCTACCGGATAA+GGG | 0.441831 | 4.4:-36784701 | None:intergenic |
| TCGTGAAGCTCGTTAATAAA+CGG | 0.445154 | 4.4:-36783255 | None:intergenic |
| TGGCGTCAGCTCAGGCTGCT+GGG | 0.447507 | 4.4:-36784490 | None:intergenic |
| TTTCTTGTTGGGGCTGTGGT+GGG | 0.448866 | 4.4:-36782431 | None:intergenic |
| AAGAAGAAGGGAAAGCTATA+CGG | 0.450481 | 4.4:+36784384 | MS.gene057814:CDS |
| TTAACCAATTCAGCAAAGAT+AGG | 0.450597 | 4.4:-36782996 | None:intergenic |
| CCATAATATCCAGGATGTAC+TGG | 0.458343 | 4.4:-36782201 | None:intergenic |
| GATCTGATTGCTTCAGCAGC+CGG | 0.463673 | 4.4:-36782651 | None:intergenic |
| TTAATTGCTCTTGCGTCAAA+CGG | 0.464925 | 4.4:-36784533 | None:intergenic |
| GGGAGGACCCAGGTGATCCC+TGG | 0.467266 | 4.4:-36782119 | None:intergenic |
| AGGACCCTTCACCATGATTG+AGG | 0.467659 | 4.4:-36784467 | None:intergenic |
| GATTTGTTGTTGTTGGGGAA+GGG | 0.469554 | 4.4:-36782301 | None:intergenic |
| CACAGCTTCCCAAGAACACT+TGG | 0.469604 | 4.4:-36782853 | None:intergenic |
| AAGAGCCCGTATGCGGTTTG+AGG | 0.473397 | 4.4:+36782941 | MS.gene057814:CDS |
| ACCGGATAAGGGTCAACATT+GGG | 0.473537 | 4.4:-36784690 | None:intergenic |
| CAGGAGTAGCTACACTAGCT+TGG | 0.474445 | 4.4:-36782140 | None:intergenic |
| TTGTGGAGGGATTTGTTGTA+GGG | 0.475008 | 4.4:-36782349 | None:intergenic |
| CTCTTTCCATCAGGTTTCGG+AGG | 0.478074 | 4.4:-36781970 | None:intergenic |
| AAGGGAAAGCTATACGGTCT+TGG | 0.480141 | 4.4:+36784390 | MS.gene057814:CDS |
| TGTTGTTGTTGGGGAACATG+TGG | 0.482231 | 4.4:-36782378 | None:intergenic |
| GTTGTTGTTGGGGAACATGT+GGG | 0.484069 | 4.4:-36782377 | None:intergenic |
| GCTCCTCATATGACCTTTGA+CGG | 0.484551 | 4.4:-36784602 | None:intergenic |
| GGAGGGATTTGTTGTTGTTG+GGG | 0.486144 | 4.4:-36782306 | None:intergenic |
| TAGCACGCTCGTCGCAGTAT+TGG | 0.486252 | 4.4:-36783302 | None:intergenic |
| TTGATGCAACACTACCCTTC+CGG | 0.489648 | 4.4:-36784431 | None:intergenic |
| CGGAGAGCACGCTGAGCGTA+TGG | 0.490492 | 4.4:+36783121 | MS.gene057814:CDS |
| CGAAGAGGGTGGTGGAGAGC+TGG | 0.490661 | 4.4:+36782461 | MS.gene057814:CDS |
| TCCCAATGTTGACCCTTATC+CGG | 0.490951 | 4.4:+36784689 | MS.gene057814:CDS |
| GCGGTATAATACTCACTTAG+TGG | 0.494631 | 4.4:+36782011 | MS.gene057814:CDS |
| TTGGGCGTCTGAGGCGTTCA+AGG | 0.500299 | 4.4:+36783022 | MS.gene057814:CDS |
| AAGAACCGGGCGTCGGAAAA+GGG | 0.501037 | 4.4:+36783065 | MS.gene057814:CDS |
| GAAAGAGCAAGGGCAACAGC+AGG | 0.505028 | 4.4:+36781986 | MS.gene057814:CDS |
| GCAGTAGAAATGACAGGCAT+CGG | 0.507512 | 4.4:-36782060 | None:intergenic |
| ATTCTTTGACCTTCAACACT+TGG | 0.510375 | 4.4:+36784343 | MS.gene057814:CDS |
| AAGATTTGCTTAACCGTCAA+AGG | 0.511841 | 4.4:+36784589 | MS.gene057814:CDS |
| TGAGGAGCAGAAGCCGTCGC+AGG | 0.513097 | 4.4:-36782159 | None:intergenic |
| AATACTGCGACGAGCGTGCT+AGG | 0.515851 | 4.4:+36783304 | MS.gene057814:CDS |
| AGGAGTAGCTACACTAGCTT+GGG | 0.517647 | 4.4:-36782139 | None:intergenic |
| ATTTGCCAGGGGTTAACCCC+TGG | 0.519753 | 4.4:+36785115 | MS.gene057814:intron |
| AGATGTCAGGCGCTTTGCCA+GGG | 0.519948 | 4.4:-36785132 | None:intergenic |
| GGCACAGTTTAGGCAAGCCC+AGG | 0.523133 | 4.4:+36784629 | MS.gene057814:CDS |
| ATGATAGCAGTTATGAATGA+TGG | 0.523463 | 4.4:-36782673 | None:intergenic |
| GCTTCAGCAGCCGGTTTGGA+AGG | 0.524446 | 4.4:-36782642 | None:intergenic |
| AGACAAGAAAGCGGCCACAT+TGG | 0.524562 | 4.4:+36782964 | MS.gene057814:CDS |
| GTGGGAGGGACCTTGAGCCT+GGG | 0.524940 | 4.4:-36784646 | None:intergenic |
| TATGGTGGTAAATGATAGGT+CGG | 0.525246 | 4.4:-36782255 | None:intergenic |
| GGAGGAAGGAAGGTCCCATA+AGG | 0.527593 | 4.4:-36782234 | None:intergenic |
| AGAAAGCGGCCACATTGGAT+TGG | 0.531391 | 4.4:+36782969 | MS.gene057814:CDS |
| GGACCCTTCACCATGATTGA+GGG | 0.531656 | 4.4:-36784466 | None:intergenic |
| CAGTAGAAATGACAGGCATC+GGG | 0.537420 | 4.4:-36782059 | None:intergenic |
| CCAATTCAGCAAAGATAGGC+GGG | 0.537787 | 4.4:-36782992 | None:intergenic |
| TAACCGTCAAAGGTCATATG+AGG | 0.541572 | 4.4:+36784599 | MS.gene057814:CDS |
| GAAGGTCCCATAAGGAGGTA+TGG | 0.543026 | 4.4:-36782226 | None:intergenic |
| TTAAAAGCGGCGCACTAGTG+TGG | 0.545514 | 4.4:-36784665 | None:intergenic |
| AAGGTCATATGAGGAGCAGC+TGG | 0.546890 | 4.4:+36784608 | MS.gene057814:CDS |
| TAAAAGCGGCGCACTAGTGT+GGG | 0.551339 | 4.4:-36784664 | None:intergenic |
| CTGAGCTGACGCCAGAGATG+CGG | 0.553348 | 4.4:+36784499 | MS.gene057814:CDS |
| CAAGAAAATGTGGTCGAAGA+GGG | 0.555530 | 4.4:+36782447 | MS.gene057814:CDS |
| AAATAGCCTCGGCAAGCTGC+CGG | 0.555959 | 4.4:-36784299 | None:intergenic |
| ATGTGCCCTCCAGTACATCC+TGG | 0.557262 | 4.4:+36782192 | MS.gene057814:CDS |
| CGAGCGTGCTAGGAGTGTGC+AGG | 0.557294 | 4.4:+36783314 | MS.gene057814:CDS |
| AGTTGCTGGAGACAAGAAGA+AGG | 0.557374 | 4.4:+36784371 | MS.gene057814:CDS |
| ATAGGCTAGGAGGTTACGTC+GGG | 0.559517 | 4.4:+36783230 | MS.gene057814:intron |
| TTTAGGCAAGCCCAGGCTCA+AGG | 0.561956 | 4.4:+36784636 | MS.gene057814:CDS |
| CTAAGACTAACCCTCAATCA+TGG | 0.562434 | 4.4:+36784456 | MS.gene057814:CDS |
| GGTATGGTGCCATAATATCC+AGG | 0.563962 | 4.4:-36782210 | None:intergenic |
| GCAAGGGCAACAGCAGGAAG+CGG | 0.568162 | 4.4:+36781992 | MS.gene057814:CDS |
| GTAACTTGGCTGCTAACTAC+CGG | 0.570124 | 4.4:+36784412 | MS.gene057814:CDS |
| ACGCTCGTCGCAGTATTGGC+CGG | 0.570260 | 4.4:-36783298 | None:intergenic |
| TGTCTCCTCAAACCGCATAC+GGG | 0.571839 | 4.4:-36782946 | None:intergenic |
| GAGAATCTCTCGGATAATCC+GGG | 0.572109 | 4.4:-36782503 | None:intergenic |
| AATGTGGTCGAAGAGGGTGG+TGG | 0.572688 | 4.4:+36782453 | MS.gene057814:CDS |
| TCTGCTGCATCTTCTAGCCA+GGG | 0.572703 | 4.4:+36782102 | MS.gene057814:CDS |
| TACCGGATAAGGGTCAACAT+TGG | 0.575351 | 4.4:-36784691 | None:intergenic |
| ATGATAGGTCGGAGGAAGGA+AGG | 0.575427 | 4.4:-36782244 | None:intergenic |
| GGTTAAGTATTGGGCGTCTG+AGG | 0.575914 | 4.4:+36783013 | MS.gene057814:CDS |
| CTTAGTGGACGCAGCGACAG+AGG | 0.579770 | 4.4:+36782026 | MS.gene057814:CDS |
| GAAACCTGATGGAAAGAGCA+AGG | 0.580800 | 4.4:+36781975 | MS.gene057814:CDS |
| AGCAAAGAAGAACCGGGCGT+CGG | 0.582886 | 4.4:+36783058 | MS.gene057814:CDS |
| GAAATGCCTCCGAAACCTGA+TGG | 0.584259 | 4.4:+36781964 | None:intergenic |
| TTGAACAGGAGGAGTATGAC+CGG | 0.586858 | 4.4:+36784280 | MS.gene057814:intron |
| GTAAATGATAGGTCGGAGGA+AGG | 0.587191 | 4.4:-36782248 | None:intergenic |
| CTAACCCTCAATCATGGTGA+AGG | 0.587704 | 4.4:+36784462 | MS.gene057814:CDS |
| TGAACTTACGAGTTTCCACT+AGG | 0.589440 | 4.4:-36782546 | None:intergenic |
| GGGCACATGTAAGTTGGATG+AGG | 0.590959 | 4.4:-36782177 | None:intergenic |
| GTAGATGCAGTAGAAATGAC+AGG | 0.591240 | 4.4:-36782066 | None:intergenic |
| AGAGCAATTAACGCAACAGA+TGG | 0.592019 | 4.4:+36784545 | MS.gene057814:CDS |
| ACTGGAGGGCACATGTAAGT+TGG | 0.592175 | 4.4:-36782183 | None:intergenic |
| CTTGTGACAAATAGGCTAGG+AGG | 0.600406 | 4.4:+36783220 | MS.gene057814:intron |
| AAGCGGCGCACTAGTGTGGG+AGG | 0.600468 | 4.4:-36784661 | None:intergenic |
| GTATGACCGGCAGCTTGCCG+AGG | 0.601524 | 4.4:+36784293 | MS.gene057814:CDS |
| CGATTCATCTTAAGGCCTAG+TGG | 0.601629 | 4.4:+36782531 | MS.gene057814:CDS |
| ACAAGAAAATGTGGTCGAAG+AGG | 0.610168 | 4.4:+36782446 | MS.gene057814:CDS |
| AATCGACGAAGAGAATCTCT+CGG | 0.614449 | 4.4:-36782513 | None:intergenic |
| CAACAAAGCAAAGAAGAACC+GGG | 0.614725 | 4.4:+36783052 | MS.gene057814:CDS |
| TACTTAGAAGAGCCCGTATG+CGG | 0.616606 | 4.4:+36782934 | MS.gene057814:CDS |
| ACCAATTCAGCAAAGATAGG+CGG | 0.617550 | 4.4:-36782993 | None:intergenic |
| TAATATCCAGGATGTACTGG+AGG | 0.622903 | 4.4:-36782198 | None:intergenic |
| CTTGGCTGCTAACTACCGGA+AGG | 0.625442 | 4.4:+36784416 | MS.gene057814:CDS |
| CTTCTAGCCAGGGATCACCT+GGG | 0.625749 | 4.4:+36782112 | MS.gene057814:CDS |
| AGTAGCTACACTAGCTTGGG+AGG | 0.627476 | 4.4:-36782136 | None:intergenic |
| GTTGCTGGAGACAAGAAGAA+GGG | 0.632114 | 4.4:+36784372 | MS.gene057814:CDS |
| GATGTCAGGCGCTTTGCCAG+GGG | 0.632664 | 4.4:-36785131 | None:intergenic |
| AATAGGCTAGGAGGTTACGT+CGG | 0.632889 | 4.4:+36783229 | MS.gene057814:intron |
| GGAAGGAAGGTCCCATAAGG+AGG | 0.636273 | 4.4:-36782231 | None:intergenic |
| TAGTGTAGCTACTCCTGCGA+CGG | 0.637488 | 4.4:+36782146 | MS.gene057814:CDS |
| TAACCCTCAATCATGGTGAA+GGG | 0.637969 | 4.4:+36784463 | MS.gene057814:CDS |
| TGTGGTGGGACTGAATATGG+TGG | 0.638237 | 4.4:-36782270 | None:intergenic |
| AAACCTGATGGAAAGAGCAA+GGG | 0.640222 | 4.4:+36781976 | MS.gene057814:CDS |
| AGACCCATTAGAAATAGCCT+CGG | 0.644902 | 4.4:-36784310 | None:intergenic |
| GGTGGTAAATGATAGGTCGG+AGG | 0.646104 | 4.4:-36782252 | None:intergenic |
| ACTGGTGGTTGCTTAAGCAA+CGG | 0.650281 | 4.4:+36783101 | MS.gene057814:CDS |
| CGTCAGCTCAGGCTGCTGGG+AGG | 0.651312 | 4.4:-36784487 | None:intergenic |
| TCAACATTGGGACTTAAAAG+CGG | 0.653227 | 4.4:-36784678 | None:intergenic |
| AGCGGCGCACTAGTGTGGGA+GGG | 0.654626 | 4.4:-36784660 | None:intergenic |
| TTGGCTGCTAACTACCGGAA+GGG | 0.659168 | 4.4:+36784417 | MS.gene057814:CDS |
| GGAGGATGCATTCACACTGG+TGG | 0.660778 | 4.4:+36783086 | MS.gene057814:CDS |
| GAAAATGTGGTCGAAGAGGG+TGG | 0.661104 | 4.4:+36782450 | MS.gene057814:CDS |
| GCAACAGATGGCAAGTCAAG+CGG | 0.662263 | 4.4:+36784557 | MS.gene057814:CDS |
| AACCGGGCGTCGGAAAAGGG+AGG | 0.663571 | 4.4:+36783068 | MS.gene057814:CDS |
| ACACTAGCTTGGGAGGACCC+AGG | 0.664522 | 4.4:-36782129 | None:intergenic |
| ACAGCCCCAACAAGAAAATG+TGG | 0.669400 | 4.4:+36782437 | MS.gene057814:CDS |
| TTGGAAGACATATAGTGATG+TGG | 0.671013 | 4.4:+36782701 | MS.gene057814:CDS |
| AAGGGAGGATGCATTCACAC+TGG | 0.674246 | 4.4:+36783083 | MS.gene057814:CDS |
| AATATCCAGGATGTACTGGA+GGG | 0.686056 | 4.4:-36782197 | None:intergenic |
| ATAGGCGGGCCAATCCAATG+TGG | 0.757504 | 4.4:-36782978 | None:intergenic |
| GGTTTGAGGAGACAAGAAAG+CGG | 0.763875 | 4.4:+36782955 | MS.gene057814:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTAGTAATAAAAATTAT+TGG | - | chr4.4:36784921-36784940 | None:intergenic | 10.0% |
| !!! | TTTTGATAATAAACAAAATA+AGG | - | chr4.4:36784173-36784192 | None:intergenic | 10.0% |
| !! | ACAATCTAAATTAAATGATA+TGG | - | chr4.4:36783175-36783194 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTAATTCGAATTG+TGG | + | chr4.4:36783430-36783449 | MS.gene057814:intron | 15.0% |
| !!! | TATTTTGTTATTATTTGAAC+AGG | + | chr4.4:36784266-36784285 | MS.gene057814:intron | 15.0% |
| !! | AATTCGAATTAAAAAAGTTG+GGG | - | chr4.4:36783461-36783480 | None:intergenic | 20.0% |
| !! | ACAATTCGAATTAAAAAAGT+TGG | - | chr4.4:36783463-36783482 | None:intergenic | 20.0% |
| !! | ATAAATTCATAAGCAATAAC+AGG | - | chr4.4:36783572-36783591 | None:intergenic | 20.0% |
| !! | CAATTCGAATTAAAAAAGTT+GGG | - | chr4.4:36783462-36783481 | None:intergenic | 20.0% |
| !! | TAAATTCATAAGCAATAACA+GGG | - | chr4.4:36783571-36783590 | None:intergenic | 20.0% |
| !! | TATAAAGATTAAGAACACAT+TGG | - | chr4.4:36784000-36784019 | None:intergenic | 20.0% |
| !!! | AAGCCTTATAATATCTATTT+AGG | - | chr4.4:36783700-36783719 | None:intergenic | 20.0% |
| !!! | TTTTATTTCTTGTGACAAAT+AGG | + | chr4.4:36783212-36783231 | MS.gene057814:intron | 20.0% |
| ! | AAAATATTTAAGGACAGAAC+TGG | - | chr4.4:36784252-36784271 | None:intergenic | 25.0% |
| ! | AAGGAAACTAATCATAAGAA+TGG | - | chr4.4:36784154-36784173 | None:intergenic | 25.0% |
| ! | GCTTTATCTAATTCATTTCT+AGG | + | chr4.4:36784759-36784778 | MS.gene057814:intron | 25.0% |
| ! | TGGCCTAAATAGATATTATA+AGG | + | chr4.4:36783694-36783713 | MS.gene057814:intron | 25.0% |
| ! | TTTATGTTATAGATGTCTTG+CGG | + | chr4.4:36783587-36783606 | MS.gene057814:intron | 25.0% |
| !! | TAGAATTTAGAACTTATCAC+AGG | + | chr4.4:36783965-36783984 | MS.gene057814:intron | 25.0% |
| !!! | TTTGTTATTATTTGAACAGG+AGG | + | chr4.4:36784269-36784288 | MS.gene057814:intron | 25.0% |
| AAAACGCACAAAAATAAGTC+CGG | + | chr4.4:36783279-36783298 | MS.gene057814:CDS | 30.0% | |
| AAAACTGAGTACTAAGGTAA+GGG | - | chr4.4:36783729-36783748 | None:intergenic | 30.0% | |
| AAAGTCGATTAAAATTACCG+CGG | - | chr4.4:36783527-36783546 | None:intergenic | 30.0% | |
| AATAACAGAGAAACAGTGTA+AGG | - | chr4.4:36784222-36784241 | None:intergenic | 30.0% | |
| ATGATAGCAGTTATGAATGA+TGG | - | chr4.4:36782676-36782695 | None:intergenic | 30.0% | |
| GAAAACTACATAGAATCAAG+TGG | - | chr4.4:36783911-36783930 | None:intergenic | 30.0% | |
| TACATAAGTATCACAAGAGT+AGG | - | chr4.4:36784826-36784845 | None:intergenic | 30.0% | |
| TGAATATGGTGGTAAATGAT+AGG | - | chr4.4:36782262-36782281 | None:intergenic | 30.0% | |
| TGATGAGGATTGAAGTTTAT+TGG | + | chr4.4:36784737-36784756 | MS.gene057814:intron | 30.0% | |
| TGCTGAATTGGTTAAGTATT+GGG | + | chr4.4:36783004-36783023 | MS.gene057814:CDS | 30.0% | |
| TTAACCAATTCAGCAAAGAT+AGG | - | chr4.4:36782999-36783018 | None:intergenic | 30.0% | |
| TTGCTGAATTGGTTAAGTAT+TGG | + | chr4.4:36783003-36783022 | MS.gene057814:CDS | 30.0% | |
| ! | ATAACTGCTATCATCACTTT+TGG | + | chr4.4:36782682-36782701 | MS.gene057814:CDS | 30.0% |
| ! | ATTTCTAGGTCTGTAATTTG+GGG | + | chr4.4:36784773-36784792 | MS.gene057814:intron | 30.0% |
| ! | CATTTCTAGGTCTGTAATTT+GGG | + | chr4.4:36784772-36784791 | MS.gene057814:intron | 30.0% |
| ! | GTTGTTTAATGATGTTTTCC+CGG | + | chr4.4:36782485-36782504 | MS.gene057814:CDS | 30.0% |
| ! | TCATTTCTAGGTCTGTAATT+TGG | + | chr4.4:36784771-36784790 | MS.gene057814:intron | 30.0% |
| ! | TTTTCTTGCAATCACATAAC+AGG | - | chr4.4:36784088-36784107 | None:intergenic | 30.0% |
| !! | TTTTAATTCGAATTGTGGTC+TGG | + | chr4.4:36783435-36783454 | MS.gene057814:intron | 30.0% |
| !!! | AACTTTTTTCCAAGTGTTGA+AGG | - | chr4.4:36784355-36784374 | None:intergenic | 30.0% |
| AAATTCGTACACAATTTGCC+AGG | + | chr4.4:36785102-36785121 | MS.gene057814:intron | 35.0% | |
| AACACTTGGAAAAAAGTTGC+TGG | + | chr4.4:36784357-36784376 | MS.gene057814:CDS | 35.0% | |
| AAGAAGAAGGGAAAGCTATA+CGG | + | chr4.4:36784384-36784403 | MS.gene057814:CDS | 35.0% | |
| AAGATTAAGAACACATTGGC+TGG | - | chr4.4:36783996-36784015 | None:intergenic | 35.0% | |
| AATGACAAACAAGACAGAAC+TGG | - | chr4.4:36783404-36783423 | None:intergenic | 35.0% | |
| AATTCGTACACAATTTGCCA+GGG | + | chr4.4:36785103-36785122 | MS.gene057814:intron | 35.0% | |
| ATTCTTTGACCTTCAACACT+TGG | + | chr4.4:36784343-36784362 | MS.gene057814:CDS | 35.0% | |
| CAAAACTGAGTACTAAGGTA+AGG | - | chr4.4:36783730-36783749 | None:intergenic | 35.0% | |
| GGCAAGTTGTAATTGCTTAT+AGG | - | chr4.4:36784062-36784081 | None:intergenic | 35.0% | |
| TATGGTGGTAAATGATAGGT+CGG | - | chr4.4:36782258-36782277 | None:intergenic | 35.0% | |
| TCAACATTGGGACTTAAAAG+CGG | - | chr4.4:36784681-36784700 | None:intergenic | 35.0% | |
| TCGTGAAGCTCGTTAATAAA+CGG | - | chr4.4:36783258-36783277 | None:intergenic | 35.0% | |
| TTAATTGCTCTTGCGTCAAA+CGG | - | chr4.4:36784536-36784555 | None:intergenic | 35.0% | |
| TTGCAATCACATAACAGGTT+TGG | - | chr4.4:36784083-36784102 | None:intergenic | 35.0% | |
| TTGGAAGACATATAGTGATG+TGG | + | chr4.4:36782701-36782720 | MS.gene057814:CDS | 35.0% | |
| TTTCTTGTGACAAATAGGCT+AGG | + | chr4.4:36783217-36783236 | MS.gene057814:intron | 35.0% | |
| ! | AAGATTTGCTTAACCGTCAA+AGG | + | chr4.4:36784589-36784608 | MS.gene057814:CDS | 35.0% |
| ! | ATCCTTTTCAGAAAGATGTC+AGG | - | chr4.4:36785148-36785167 | None:intergenic | 35.0% |
| ! | ATGATAATGAAAAAGAGCGC+TGG | + | chr4.4:36782724-36782743 | MS.gene057814:CDS | 35.0% |
| ! | TACCTTAGTACTCAGTTTTG+TGG | + | chr4.4:36783730-36783749 | MS.gene057814:intron | 35.0% |
| ! | TTCGACCACATTTTCTTGTT+GGG | - | chr4.4:36782445-36782464 | None:intergenic | 35.0% |
| ! | TTTGTTGTAGGGAAAAAGGT+GGG | - | chr4.4:36782341-36782360 | None:intergenic | 35.0% |
| !! | ACCTTAGTACTCAGTTTTGT+GGG | + | chr4.4:36783731-36783750 | MS.gene057814:intron | 35.0% |
| !! | ATGATTGAGGGTTAGTCTTA+GGG | - | chr4.4:36784457-36784476 | None:intergenic | 35.0% |
| !! | ATTTGTTGTAGGGAAAAAGG+TGG | - | chr4.4:36782342-36782361 | None:intergenic | 35.0% |
| !! | CGACTTTGTTGATTCTTACA+AGG | + | chr4.4:36783540-36783559 | MS.gene057814:intron | 35.0% |
| !! | GTTCTGTCTTGTTTGTCATT+TGG | + | chr4.4:36783404-36783423 | MS.gene057814:intron | 35.0% |
| !!! | GCACTATTTTTGTTGCAGTT+TGG | + | chr4.4:36783376-36783395 | MS.gene057814:intron | 35.0% |
| AAACCTGATGGAAAGAGCAA+GGG | + | chr4.4:36781976-36781995 | MS.gene057814:CDS | 40.0% | |
| AATATCCAGGATGTACTGGA+GGG | - | chr4.4:36782200-36782219 | None:intergenic | 40.0% | |
| AATCGACGAAGAGAATCTCT+CGG | - | chr4.4:36782516-36782535 | None:intergenic | 40.0% | |
| AATGCAGACCAAGTGTTCTT+GGG | + | chr4.4:36782845-36782864 | MS.gene057814:intron | 40.0% | |
| ACAAGAAAATGTGGTCGAAG+AGG | + | chr4.4:36782446-36782465 | MS.gene057814:CDS | 40.0% | |
| ACAAGAGTAGGAATTGTGCT+GGG | - | chr4.4:36784814-36784833 | None:intergenic | 40.0% | |
| ACCAATTCAGCAAAGATAGG+CGG | - | chr4.4:36782996-36783015 | None:intergenic | 40.0% | |
| AGACCCATTAGAAATAGCCT+CGG | - | chr4.4:36784313-36784332 | None:intergenic | 40.0% | |
| AGAGAATCTCTCGGATAATC+CGG | - | chr4.4:36782507-36782526 | None:intergenic | 40.0% | |
| AGAGCAATTAACGCAACAGA+TGG | + | chr4.4:36784545-36784564 | MS.gene057814:CDS | 40.0% | |
| ATCATACTGCAGAATGCACA+TGG | - | chr4.4:36783864-36783883 | None:intergenic | 40.0% | |
| ATTCGTACACAATTTGCCAG+GGG | + | chr4.4:36785104-36785123 | MS.gene057814:intron | 40.0% | |
| ATTTAAGGACAGAACTGGCA+AGG | - | chr4.4:36784247-36784266 | None:intergenic | 40.0% | |
| CAACAAAGCAAAGAAGAACC+GGG | + | chr4.4:36783052-36783071 | MS.gene057814:CDS | 40.0% | |
| CAAGAAAATGTGGTCGAAGA+GGG | + | chr4.4:36782447-36782466 | MS.gene057814:CDS | 40.0% | |
| CCAACAAAGCAAAGAAGAAC+CGG | + | chr4.4:36783051-36783070 | MS.gene057814:CDS | 40.0% | |
| CCAGTACATCCTGGATATTA+TGG | + | chr4.4:36782201-36782220 | MS.gene057814:CDS | 40.0% | |
| CCATAATATCCAGGATGTAC+TGG | - | chr4.4:36782204-36782223 | None:intergenic | 40.0% | |
| CTAAGACTAACCCTCAATCA+TGG | + | chr4.4:36784456-36784475 | MS.gene057814:CDS | 40.0% | |
| GAAGGTGATGAATGATACAG+AGG | - | chr4.4:36783626-36783645 | None:intergenic | 40.0% | |
| GCGGTATAATACTCACTTAG+TGG | + | chr4.4:36782011-36782030 | MS.gene057814:CDS | 40.0% | |
| GTAGATGCAGTAGAAATGAC+AGG | - | chr4.4:36782069-36782088 | None:intergenic | 40.0% | |
| TAACCCTCAATCATGGTGAA+GGG | + | chr4.4:36784463-36784482 | MS.gene057814:CDS | 40.0% | |
| TAACCGTCAAAGGTCATATG+AGG | + | chr4.4:36784599-36784618 | MS.gene057814:CDS | 40.0% | |
| TAATATCCAGGATGTACTGG+AGG | - | chr4.4:36782201-36782220 | None:intergenic | 40.0% | |
| TAATGCAGACCAAGTGTTCT+TGG | + | chr4.4:36782844-36782863 | MS.gene057814:intron | 40.0% | |
| TCCCACAAAACTGAGTACTA+AGG | - | chr4.4:36783735-36783754 | None:intergenic | 40.0% | |
| TCTATTTAGGCCATGTCTCT+AGG | - | chr4.4:36783687-36783706 | None:intergenic | 40.0% | |
| TGAACTTACGAGTTTCCACT+AGG | - | chr4.4:36782549-36782568 | None:intergenic | 40.0% | |
| TGTCTCTAGGCAATGAAGAA+CGG | - | chr4.4:36783674-36783693 | None:intergenic | 40.0% | |
| TTAAAATTACCGCGGACAGA+TGG | - | chr4.4:36783519-36783538 | None:intergenic | 40.0% | |
| TTCTTCATTGCCTAGAGACA+TGG | + | chr4.4:36783674-36783693 | MS.gene057814:intron | 40.0% | |
| TTGCTCTTTCCATCAGGTTT+CGG | - | chr4.4:36781976-36781995 | None:intergenic | 40.0% | |
| ! | CTTCGACCACATTTTCTTGT+TGG | - | chr4.4:36782446-36782465 | None:intergenic | 40.0% |
| ! | CTTGTCGTATCTCTCAGTTT+TGG | + | chr4.4:36783341-36783360 | MS.gene057814:intron | 40.0% |
| ! | TCGACCACATTTTCTTGTTG+GGG | - | chr4.4:36782444-36782463 | None:intergenic | 40.0% |
| !! | ATGAAAAAGAGCGCTGGTTT+AGG | + | chr4.4:36782730-36782749 | MS.gene057814:CDS | 40.0% |
| !! | ATTTGTTGTTGTTGGGGAAG+GGG | - | chr4.4:36782303-36782322 | None:intergenic | 40.0% |
| !! | CATGATTGAGGGTTAGTCTT+AGG | - | chr4.4:36784458-36784477 | None:intergenic | 40.0% |
| !! | CTCTTCGTCGATTCATCTTA+AGG | + | chr4.4:36782523-36782542 | MS.gene057814:CDS | 40.0% |
| !! | GATTTGTTGTTGTTGGGGAA+GGG | - | chr4.4:36782304-36782323 | None:intergenic | 40.0% |
| !! | GGGATTTGTTGTAGGGAAAA+AGG | - | chr4.4:36782345-36782364 | None:intergenic | 40.0% |
| !! | TGGAGGGATTTGTTGTTGTT+GGG | - | chr4.4:36782310-36782329 | None:intergenic | 40.0% |
| !! | TTGCCGAGGCTATTTCTAAT+GGG | + | chr4.4:36784307-36784326 | MS.gene057814:CDS | 40.0% |
| !! | TTGTGGAGGGATTTGTTGTA+GGG | - | chr4.4:36782352-36782371 | None:intergenic | 40.0% |
| !! | TTTTGTGGTGGGACTGAATA+TGG | - | chr4.4:36782276-36782295 | None:intergenic | 40.0% |
| !!! | GAAAAAGGTGGGTTTTGTTG+TGG | - | chr4.4:36782330-36782349 | None:intergenic | 40.0% |
| !!! | TGGTGGGTTTTGTTGTTGTT+GGG | - | chr4.4:36782391-36782410 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGTTG+TGG | - | chr4.4:36782411-36782430 | None:intergenic | 40.0% |
| AAGGGAAAGCTATACGGTCT+TGG | + | chr4.4:36784390-36784409 | MS.gene057814:CDS | 45.0% | |
| AATAGGCTAGGAGGTTACGT+CGG | + | chr4.4:36783229-36783248 | MS.gene057814:intron | 45.0% | |
| ACAGCCCCAACAAGAAAATG+TGG | + | chr4.4:36782437-36782456 | MS.gene057814:CDS | 45.0% | |
| ACCGGATAAGGGTCAACATT+GGG | - | chr4.4:36784693-36784712 | None:intergenic | 45.0% | |
| ACTGGTGGTTGCTTAAGCAA+CGG | + | chr4.4:36783101-36783120 | MS.gene057814:CDS | 45.0% | |
| AGTTGCTGGAGACAAGAAGA+AGG | + | chr4.4:36784371-36784390 | MS.gene057814:CDS | 45.0% | |
| ATGGCACCATACCTCCTTAT+GGG | + | chr4.4:36782220-36782239 | MS.gene057814:CDS | 45.0% | |
| CACAAGAGTAGGAATTGTGC+TGG | - | chr4.4:36784815-36784834 | None:intergenic | 45.0% | |
| CAGTAGAAATGACAGGCATC+GGG | - | chr4.4:36782062-36782081 | None:intergenic | 45.0% | |
| CCAATTCAGCAAAGATAGGC+GGG | - | chr4.4:36782995-36783014 | None:intergenic | 45.0% | |
| CCGGTTCTTCTTTGCTTTGT+TGG | - | chr4.4:36783054-36783073 | None:intergenic | 45.0% | |
| CGATTCATCTTAAGGCCTAG+TGG | + | chr4.4:36782531-36782550 | MS.gene057814:CDS | 45.0% | |
| CTAACCCTCAATCATGGTGA+AGG | + | chr4.4:36784462-36784481 | MS.gene057814:CDS | 45.0% | |
| CTTGTGACAAATAGGCTAGG+AGG | + | chr4.4:36783220-36783239 | MS.gene057814:intron | 45.0% | |
| GAAACCTGATGGAAAGAGCA+AGG | + | chr4.4:36781975-36781994 | MS.gene057814:CDS | 45.0% | |
| GAGAATCTCTCGGATAATCC+GGG | - | chr4.4:36782506-36782525 | None:intergenic | 45.0% | |
| GCAGTAGAAATGACAGGCAT+CGG | - | chr4.4:36782063-36782082 | None:intergenic | 45.0% | |
| GCTCCTCATATGACCTTTGA+CGG | - | chr4.4:36784605-36784624 | None:intergenic | 45.0% | |
| GGATGATGAGGATCATGATG+AGG | + | chr4.4:36784722-36784741 | MS.gene057814:intron | 45.0% | |
| GGTTTGAGGAGACAAGAAAG+CGG | + | chr4.4:36782955-36782974 | MS.gene057814:CDS | 45.0% | |
| GTAAATGATAGGTCGGAGGA+AGG | - | chr4.4:36782251-36782270 | None:intergenic | 45.0% | |
| GTAACTTGGCTGCTAACTAC+CGG | + | chr4.4:36784412-36784431 | MS.gene057814:CDS | 45.0% | |
| GTTGCTGGAGACAAGAAGAA+GGG | + | chr4.4:36784372-36784391 | MS.gene057814:CDS | 45.0% | |
| TACCGGATAAGGGTCAACAT+TGG | - | chr4.4:36784694-36784713 | None:intergenic | 45.0% | |
| TACTTAGAAGAGCCCGTATG+CGG | + | chr4.4:36782934-36782953 | MS.gene057814:CDS | 45.0% | |
| TAGATGTCTTGCGGCAACTT+TGG | + | chr4.4:36783596-36783615 | MS.gene057814:intron | 45.0% | |
| TATGGCACCATACCTCCTTA+TGG | + | chr4.4:36782219-36782238 | MS.gene057814:CDS | 45.0% | |
| TCATCATCCTCCTCATCTAC+CGG | - | chr4.4:36784711-36784730 | None:intergenic | 45.0% | |
| TCCCAATGTTGACCCTTATC+CGG | + | chr4.4:36784689-36784708 | MS.gene057814:CDS | 45.0% | |
| TTGATGCAACACTACCCTTC+CGG | - | chr4.4:36784434-36784453 | None:intergenic | 45.0% | |
| TTGTCTCCTCAAACCGCATA+CGG | - | chr4.4:36782950-36782969 | None:intergenic | 45.0% | |
| ! | ACATTTTCTTGTTGGGGCTG+TGG | - | chr4.4:36782438-36782457 | None:intergenic | 45.0% |
| ! | AGGAGTAGCTACACTAGCTT+GGG | - | chr4.4:36782142-36782161 | None:intergenic | 45.0% |
| ! | CAGCTTTTTGCCTTCCAAAC+CGG | + | chr4.4:36782632-36782651 | MS.gene057814:intron | 45.0% |
| ! | CGCCTGACATCTTTCTGAAA+AGG | + | chr4.4:36785143-36785162 | MS.gene057814:CDS | 45.0% |
| ! | GCTATACGGTCTTGGTAACT+TGG | + | chr4.4:36784398-36784417 | MS.gene057814:CDS | 45.0% |
| ! | GTTGTTGTTGGGGAACATGT+GGG | - | chr4.4:36782380-36782399 | None:intergenic | 45.0% |
| ! | TGTTGTTGTTGGGGAACATG+TGG | - | chr4.4:36782381-36782400 | None:intergenic | 45.0% |
| ! | TTGAACAGGAGGAGTATGAC+CGG | + | chr4.4:36784280-36784299 | MS.gene057814:intron | 45.0% |
| !! | CTTGCCGAGGCTATTTCTAA+TGG | + | chr4.4:36784306-36784325 | MS.gene057814:CDS | 45.0% |
| !! | GGAGGGATTTGTTGTTGTTG+GGG | - | chr4.4:36782309-36782328 | None:intergenic | 45.0% |
| !! | GGATTTGTTGTTGTTGGGGA+AGG | - | chr4.4:36782305-36782324 | None:intergenic | 45.0% |
| !! | GGTATGGTGCCATAATATCC+AGG | - | chr4.4:36782213-36782232 | None:intergenic | 45.0% |
| !! | GTGGAGGGATTTGTTGTTGT+TGG | - | chr4.4:36782311-36782330 | None:intergenic | 45.0% |
| !! | GTTGTGGAGGGATTTGTTGT+AGG | - | chr4.4:36782314-36782333 | None:intergenic | 45.0% |
| !!! | AAAGGTGGGTTTTGTTGTGG+AGG | - | chr4.4:36782327-36782346 | None:intergenic | 45.0% |
| !!! | AAGGTGGGTTTTGTTGTGGA+GGG | - | chr4.4:36782326-36782345 | None:intergenic | 45.0% |
| !!! | ACATGTGGGTTTTGTTGTGG+AGG | - | chr4.4:36782366-36782385 | None:intergenic | 45.0% |
| !!! | CATGTGGGTTTTGTTGTGGA+GGG | - | chr4.4:36782365-36782384 | None:intergenic | 45.0% |
| !!! | GGAACATGTGGGTTTTGTTG+TGG | - | chr4.4:36782369-36782388 | None:intergenic | 45.0% |
| !!! | GGTGGGTTTTGTTGTTGTTG+GGG | - | chr4.4:36782390-36782409 | None:intergenic | 45.0% |
| !!! | GTGGTGGGTTTTGTTGTTGT+TGG | - | chr4.4:36782392-36782411 | None:intergenic | 45.0% |
| !! | AAATAATAACAAAATATTTA+AGG | - | chr4.4:36784262-36784281 | None:intergenic | 5.0% |
| AAGGGAGGATGCATTCACAC+TGG | + | chr4.4:36783083-36783102 | MS.gene057814:CDS | 50.0% | |
| AAGGTCATATGAGGAGCAGC+TGG | + | chr4.4:36784608-36784627 | MS.gene057814:CDS | 50.0% | |
| AATTACCGCGGACAGATGGT+TGG | - | chr4.4:36783515-36783534 | None:intergenic | 50.0% | |
| AGAAAGCGGCCACATTGGAT+TGG | + | chr4.4:36782969-36782988 | MS.gene057814:CDS | 50.0% | |
| AGACAAGAAAGCGGCCACAT+TGG | + | chr4.4:36782964-36782983 | MS.gene057814:CDS | 50.0% | |
| AGGACCCTTCACCATGATTG+AGG | - | chr4.4:36784470-36784489 | None:intergenic | 50.0% | |
| ATAGGCTAGGAGGTTACGTC+GGG | + | chr4.4:36783230-36783249 | MS.gene057814:intron | 50.0% | |
| ATCTGCTGCATCTTCTAGCC+AGG | + | chr4.4:36782101-36782120 | MS.gene057814:CDS | 50.0% | |
| ATGATAGGTCGGAGGAAGGA+AGG | - | chr4.4:36782247-36782266 | None:intergenic | 50.0% | |
| CACAGCTTCCCAAGAACACT+TGG | - | chr4.4:36782856-36782875 | None:intergenic | 50.0% | |
| CAGGAGTAGCTACACTAGCT+TGG | - | chr4.4:36782143-36782162 | None:intergenic | 50.0% | |
| CCCGCCTATCTTTGCTGAAT+TGG | + | chr4.4:36782992-36783011 | MS.gene057814:CDS | 50.0% | |
| CCTCCTCATCTACCGGATAA+GGG | - | chr4.4:36784704-36784723 | None:intergenic | 50.0% | |
| CCTTCATCATGACACGTGAG+CGG | + | chr4.4:36783641-36783660 | MS.gene057814:intron | 50.0% | |
| CTCTTTCCATCAGGTTTCGG+AGG | - | chr4.4:36781973-36781992 | None:intergenic | 50.0% | |
| GAAAATGTGGTCGAAGAGGG+TGG | + | chr4.4:36782450-36782469 | MS.gene057814:CDS | 50.0% | |
| GAAGGTCCCATAAGGAGGTA+TGG | - | chr4.4:36782229-36782248 | None:intergenic | 50.0% | |
| GATCTGATTGCTTCAGCAGC+CGG | - | chr4.4:36782654-36782673 | None:intergenic | 50.0% | |
| GCAACAGATGGCAAGTCAAG+CGG | + | chr4.4:36784557-36784576 | MS.gene057814:CDS | 50.0% | |
| GGACCCTTCACCATGATTGA+GGG | - | chr4.4:36784469-36784488 | None:intergenic | 50.0% | |
| GGTAGATGAGGAGGATGATG+AGG | + | chr4.4:36784710-36784729 | MS.gene057814:intron | 50.0% | |
| GGTGGTAAATGATAGGTCGG+AGG | - | chr4.4:36782255-36782274 | None:intergenic | 50.0% | |
| TAAAAGCGGCGCACTAGTGT+GGG | - | chr4.4:36784667-36784686 | None:intergenic | 50.0% | |
| TAGTGTAGCTACTCCTGCGA+CGG | + | chr4.4:36782146-36782165 | MS.gene057814:CDS | 50.0% | |
| TCCTCCTCATCTACCGGATA+AGG | - | chr4.4:36784705-36784724 | None:intergenic | 50.0% | |
| TCTGCTGCATCTTCTAGCCA+GGG | + | chr4.4:36782102-36782121 | MS.gene057814:CDS | 50.0% | |
| TGAATAAGCTCCCGCATCTC+TGG | - | chr4.4:36784513-36784532 | None:intergenic | 50.0% | |
| TGACCCTTATCCGGTAGATG+AGG | + | chr4.4:36784698-36784717 | MS.gene057814:intron | 50.0% | |
| TGTCTCCTCAAACCGCATAC+GGG | - | chr4.4:36782949-36782968 | None:intergenic | 50.0% | |
| TTAAAAGCGGCGCACTAGTG+TGG | - | chr4.4:36784668-36784687 | None:intergenic | 50.0% | |
| TTGCCCTTGCTCTTTCCATC+AGG | - | chr4.4:36781982-36782001 | None:intergenic | 50.0% | |
| TTGGCTGCTAACTACCGGAA+GGG | + | chr4.4:36784417-36784436 | MS.gene057814:CDS | 50.0% | |
| TTTCTTGTTGGGGCTGTGGT+GGG | - | chr4.4:36782434-36782453 | None:intergenic | 50.0% | |
| ! | ACTGGAGGGCACATGTAAGT+TGG | - | chr4.4:36782186-36782205 | None:intergenic | 50.0% |
| ! | AGTAGCTACACTAGCTTGGG+AGG | - | chr4.4:36782139-36782158 | None:intergenic | 50.0% |
| ! | CAGAGCTGCTGCACGTTTTT+CGG | + | chr4.4:36782908-36782927 | MS.gene057814:CDS | 50.0% |
| ! | GGGCACATGTAAGTTGGATG+AGG | - | chr4.4:36782180-36782199 | None:intergenic | 50.0% |
| ! | GTTGTTGTTGGGGTTGTGGT+GGG | - | chr4.4:36782407-36782426 | None:intergenic | 50.0% |
| ! | TGTGGTGGGACTGAATATGG+TGG | - | chr4.4:36782273-36782292 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGTTGTGG+TGG | - | chr4.4:36782408-36782427 | None:intergenic | 50.0% |
| ! | TTTTCTTGTTGGGGCTGTGG+TGG | - | chr4.4:36782435-36782454 | None:intergenic | 50.0% |
| !! | GAAGGGGAAGGTTTTGTGGT+GGG | - | chr4.4:36782287-36782306 | None:intergenic | 50.0% |
| !! | GGTTAAGTATTGGGCGTCTG+AGG | + | chr4.4:36783013-36783032 | MS.gene057814:CDS | 50.0% |
| AAATAGCCTCGGCAAGCTGC+CGG | - | chr4.4:36784302-36784321 | None:intergenic | 55.0% | |
| AAGAGCCCGTATGCGGTTTG+AGG | + | chr4.4:36782941-36782960 | MS.gene057814:CDS | 55.0% | |
| AAGATGTCAGGCGCTTTGCC+AGG | - | chr4.4:36785136-36785155 | None:intergenic | 55.0% | |
| AATACTGCGACGAGCGTGCT+AGG | + | chr4.4:36783304-36783323 | MS.gene057814:CDS | 55.0% | |
| AATGTGGTCGAAGAGGGTGG+TGG | + | chr4.4:36782453-36782472 | MS.gene057814:CDS | 55.0% | |
| AGATGTCAGGCGCTTTGCCA+GGG | - | chr4.4:36785135-36785154 | None:intergenic | 55.0% | |
| AGCAAAGAAGAACCGGGCGT+CGG | + | chr4.4:36783058-36783077 | MS.gene057814:CDS | 55.0% | |
| AGGAGCAGCTGGCACAGTTT+AGG | + | chr4.4:36784619-36784638 | MS.gene057814:CDS | 55.0% | |
| ATAGGCGGGCCAATCCAATG+TGG | - | chr4.4:36782981-36783000 | None:intergenic | 55.0% | |
| ATGTGCCCTCCAGTACATCC+TGG | + | chr4.4:36782192-36782211 | MS.gene057814:CDS | 55.0% | |
| ATTTGCCAGGGGTTAACCCC+TGG | + | chr4.4:36785115-36785134 | MS.gene057814:intron | 55.0% | |
| CCCTTATCCGGTAGATGAGG+AGG | + | chr4.4:36784701-36784720 | MS.gene057814:intron | 55.0% | |
| CCGCTCACGTGTCATGATGA+AGG | - | chr4.4:36783644-36783663 | None:intergenic | 55.0% | |
| CTCCATGCTCAGATCAGACG+CGG | - | chr4.4:36783769-36783788 | None:intergenic | 55.0% | |
| CTTCTAGCCAGGGATCACCT+GGG | + | chr4.4:36782112-36782131 | MS.gene057814:CDS | 55.0% | |
| CTTGGCTGCTAACTACCGGA+AGG | + | chr4.4:36784416-36784435 | MS.gene057814:CDS | 55.0% | |
| GAAAGAGCAAGGGCAACAGC+AGG | + | chr4.4:36781986-36782005 | MS.gene057814:CDS | 55.0% | |
| GATTGCTTCAGCAGCCGGTT+TGG | - | chr4.4:36782649-36782668 | None:intergenic | 55.0% | |
| GGAAGGAAGGTCCCATAAGG+AGG | - | chr4.4:36782234-36782253 | None:intergenic | 55.0% | |
| GGAGGAAGGAAGGTCCCATA+AGG | - | chr4.4:36782237-36782256 | None:intergenic | 55.0% | |
| GGAGGATGCATTCACACTGG+TGG | + | chr4.4:36783086-36783105 | MS.gene057814:CDS | 55.0% | |
| TAGCACGCTCGTCGCAGTAT+TGG | - | chr4.4:36783305-36783324 | None:intergenic | 55.0% | |
| TCTTCTAGCCAGGGATCACC+TGG | + | chr4.4:36782111-36782130 | MS.gene057814:CDS | 55.0% | |
| TGCATCCAACCATCTGTCCG+CGG | + | chr4.4:36783507-36783526 | MS.gene057814:intron | 55.0% | |
| TTTAGGCAAGCCCAGGCTCA+AGG | + | chr4.4:36784636-36784655 | MS.gene057814:CDS | 55.0% | |
| ! | GTTGTTGTTGGGGAAGGGGA+AGG | - | chr4.4:36782299-36782318 | None:intergenic | 55.0% |
| ! | TGGGGAAGGGGAAGGTTTTG+TGG | - | chr4.4:36782291-36782310 | None:intergenic | 55.0% |
| !! | AAGAACCGGGCGTCGGAAAA+GGG | + | chr4.4:36783065-36783084 | MS.gene057814:CDS | 55.0% |
| !! | GCGCTGGTTTAGGCTCTTTC+AGG | + | chr4.4:36782740-36782759 | MS.gene057814:CDS | 55.0% |
| !! | GGAAGGGGAAGGTTTTGTGG+TGG | - | chr4.4:36782288-36782307 | None:intergenic | 55.0% |
| AGCCGCGTCTGATCTGAGCA+TGG | + | chr4.4:36783764-36783783 | MS.gene057814:intron | 60.0% | |
| CGCGTCTGATCTGAGCATGG+AGG | + | chr4.4:36783767-36783786 | MS.gene057814:intron | 60.0% | |
| CTGAGCTGACGCCAGAGATG+CGG | + | chr4.4:36784499-36784518 | MS.gene057814:CDS | 60.0% | |
| CTTTGCCAGGGGTTAACCCC+TGG | - | chr4.4:36785123-36785142 | None:intergenic | 60.0% | |
| GATGTCAGGCGCTTTGCCAG+GGG | - | chr4.4:36785134-36785153 | None:intergenic | 60.0% | |
| GCAAGGGCAACAGCAGGAAG+CGG | + | chr4.4:36781992-36782011 | MS.gene057814:CDS | 60.0% | |
| GGCACAGTTTAGGCAAGCCC+AGG | + | chr4.4:36784629-36784648 | MS.gene057814:CDS | 60.0% | |
| TGAGCTGACGCCAGAGATGC+GGG | + | chr4.4:36784500-36784519 | MS.gene057814:CDS | 60.0% | |
| ! | ACACTAGCTTGGGAGGACCC+AGG | - | chr4.4:36782132-36782151 | None:intergenic | 60.0% |
| ! | ATCCTCCCTTTTCCGACGCC+CGG | - | chr4.4:36783073-36783092 | None:intergenic | 60.0% |
| ! | CTTAGTGGACGCAGCGACAG+AGG | + | chr4.4:36782026-36782045 | MS.gene057814:CDS | 60.0% |
| ! | TTGGGCGTCTGAGGCGTTCA+AGG | + | chr4.4:36783022-36783041 | MS.gene057814:CDS | 60.0% |
| !! | ACGCTCGTCGCAGTATTGGC+CGG | - | chr4.4:36783301-36783320 | None:intergenic | 60.0% |
| !! | GAAGAACCGGGCGTCGGAAA+AGG | + | chr4.4:36783064-36783083 | MS.gene057814:CDS | 60.0% |
| !! | GCTTCAGCAGCCGGTTTGGA+AGG | - | chr4.4:36782645-36782664 | None:intergenic | 60.0% |
| AAGCGGCGCACTAGTGTGGG+AGG | - | chr4.4:36784664-36784683 | None:intergenic | 65.0% | |
| AGCGGCGCACTAGTGTGGGA+GGG | - | chr4.4:36784663-36784682 | None:intergenic | 65.0% | |
| CGCATCTCTGGCGTCAGCTC+AGG | - | chr4.4:36784501-36784520 | None:intergenic | 65.0% | |
| GTATGACCGGCAGCTTGCCG+AGG | + | chr4.4:36784293-36784312 | MS.gene057814:CDS | 65.0% | |
| GTGGGAGGGACCTTGAGCCT+GGG | - | chr4.4:36784649-36784668 | None:intergenic | 65.0% | |
| TGAGGAGCAGAAGCCGTCGC+AGG | - | chr4.4:36782162-36782181 | None:intergenic | 65.0% | |
| TGGCGTCAGCTCAGGCTGCT+GGG | - | chr4.4:36784493-36784512 | None:intergenic | 65.0% | |
| TGTGGGAGGGACCTTGAGCC+TGG | - | chr4.4:36784650-36784669 | None:intergenic | 65.0% | |
| ! | CGAGCGTGCTAGGAGTGTGC+AGG | + | chr4.4:36783314-36783333 | MS.gene057814:CDS | 65.0% |
| ! | CGGAGAGCACGCTGAGCGTA+TGG | + | chr4.4:36783121-36783140 | MS.gene057814:CDS | 65.0% |
| !! | AACCGGGCGTCGGAAAAGGG+AGG | + | chr4.4:36783068-36783087 | MS.gene057814:CDS | 65.0% |
| !! | CGAAGAGGGTGGTGGAGAGC+TGG | + | chr4.4:36782461-36782480 | MS.gene057814:CDS | 65.0% |
| CGTCAGCTCAGGCTGCTGGG+AGG | - | chr4.4:36784490-36784509 | None:intergenic | 70.0% | |
| CTGGCGTCAGCTCAGGCTGC+TGG | - | chr4.4:36784494-36784513 | None:intergenic | 70.0% | |
| GGGAGGACCCAGGTGATCCC+TGG | - | chr4.4:36782122-36782141 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 36781967 | 36785192 | 36781967 | ID=MS.gene057814 |
| chr4.4 | mRNA | 36781967 | 36785192 | 36781967 | ID=MS.gene057814.t1;Parent=MS.gene057814 |
| chr4.4 | exon | 36781967 | 36782559 | 36781967 | ID=MS.gene057814.t1.exon1;Parent=MS.gene057814.t1 |
| chr4.4 | CDS | 36781967 | 36782559 | 36781967 | ID=cds.MS.gene057814.t1;Parent=MS.gene057814.t1 |
| chr4.4 | exon | 36782635 | 36782761 | 36782635 | ID=MS.gene057814.t1.exon2;Parent=MS.gene057814.t1 |
| chr4.4 | CDS | 36782635 | 36782761 | 36782635 | ID=cds.MS.gene057814.t1;Parent=MS.gene057814.t1 |
| chr4.4 | exon | 36782852 | 36783142 | 36782852 | ID=MS.gene057814.t1.exon3;Parent=MS.gene057814.t1 |
| chr4.4 | CDS | 36782852 | 36783142 | 36782852 | ID=cds.MS.gene057814.t1;Parent=MS.gene057814.t1 |
| chr4.4 | exon | 36783234 | 36783335 | 36783234 | ID=MS.gene057814.t1.exon4;Parent=MS.gene057814.t1 |
| chr4.4 | CDS | 36783234 | 36783335 | 36783234 | ID=cds.MS.gene057814.t1;Parent=MS.gene057814.t1 |
| chr4.4 | exon | 36784288 | 36784710 | 36784288 | ID=MS.gene057814.t1.exon5;Parent=MS.gene057814.t1 |
| chr4.4 | CDS | 36784288 | 36784710 | 36784288 | ID=cds.MS.gene057814.t1;Parent=MS.gene057814.t1 |
| chr4.4 | exon | 36785124 | 36785192 | 36785124 | ID=MS.gene057814.t1.exon6;Parent=MS.gene057814.t1 |
| chr4.4 | CDS | 36785124 | 36785192 | 36785124 | ID=cds.MS.gene057814.t1;Parent=MS.gene057814.t1 |
| Gene Sequence |
| Protein sequence |
