Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28118.t1 | XP_003630080.1 | 89.2 | 259 | 27 | 1 | 14 | 271 | 13 | 271 | 2.10E-124 | 455.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28118.t1 | Q5HZH2 | 45.9 | 220 | 119 | 0 | 35 | 254 | 38 | 257 | 4.9e-50 | 199.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28118.t1 | G7LAF7 | 89.2 | 259 | 27 | 1 | 14 | 271 | 13 | 271 | 1.5e-124 | 455.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057060 | MS.gene28118 | 0.81044 | 1.15E-50 | -1.69E-46 |
| MS.gene059569 | MS.gene28118 | 0.802975 | 4.35E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28118.t1 | MTR_8g091510 | 91.892 | 259 | 20 | 1 | 14 | 271 | 13 | 271 | 2.99e-175 | 484 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28118.t1 | AT5G10070 | 70.796 | 226 | 63 | 1 | 43 | 265 | 32 | 257 | 1.47e-114 | 330 |
| MS.gene28118.t1 | AT5G10070 | 77.922 | 154 | 34 | 0 | 43 | 196 | 32 | 185 | 1.65e-89 | 264 |
Find 68 sgRNAs with CRISPR-Local
Find 349 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCACATTGCAAGCTTGATTT+TGG | 0.103207 | 4.4:+10021286 | None:intergenic |
| GGGCTGTTGACACAGGATTT+TGG | 0.156208 | 4.4:-10020934 | MS.gene28118:intron |
| CATGGCCGACCATAATTTAT+TGG | 0.182712 | 4.4:+10018957 | None:intergenic |
| TGTTGCTTGGCAAGTTTAAC+TGG | 0.229226 | 4.4:-10018525 | MS.gene28118:CDS |
| CAACAGCCAATCCTTTATTC+TGG | 0.275842 | 4.4:+10019651 | None:intergenic |
| TGGCTGCTGCTTTGACAATA+TGG | 0.286533 | 4.4:-10018911 | MS.gene28118:intron |
| TACTCTTTAATCCAGAATAA+AGG | 0.315486 | 4.4:-10019662 | MS.gene28118:CDS |
| TTACGTGTGACTAATGGTTT+TGG | 0.315588 | 4.4:-10019966 | MS.gene28118:CDS |
| AAATAATTTCAGCACTGTTT+TGG | 0.333601 | 4.4:+10017717 | None:intergenic |
| GCGGCAAACCCAATAAATTA+TGG | 0.347803 | 4.4:-10018966 | MS.gene28118:CDS |
| TTATTTCTGTTCAAAATGAT+TGG | 0.353309 | 4.4:-10017700 | MS.gene28118:CDS |
| ATGGCCGACCATAATTTATT+GGG | 0.359883 | 4.4:+10018958 | None:intergenic |
| CTCTTCATCACTATTGTCTA+TGG | 0.381809 | 4.4:+10017330 | None:intergenic |
| AACTCTTCCGATTCTGATGA+TGG | 0.381819 | 4.4:-10017388 | MS.gene28118:CDS |
| TCACTATCAGTAGGAGCCTT+TGG | 0.382863 | 4.4:+10017656 | None:intergenic |
| GCGCAGCGCAACTTCACAAA+AGG | 0.400711 | 4.4:+10019596 | None:intergenic |
| GCTATCTTGTGTAGAGGCCT+TGG | 0.413021 | 4.4:-10018931 | MS.gene28118:CDS |
| GAGACACATTGCTTTCCAAC+TGG | 0.415063 | 4.4:+10019695 | None:intergenic |
| GATTAAAGAGTAATCTTCTC+TGG | 0.428373 | 4.4:+10019673 | None:intergenic |
| AGAGACAGAGCGTTAGGATC+AGG | 0.433767 | 4.4:-10022497 | MS.gene28118:CDS |
| CGGACGCAAGCTTTCAAGAC+TGG | 0.444859 | 4.4:-10020887 | MS.gene28118:CDS |
| ACTACCTGGACGCACCCACC+TGG | 0.458303 | 4.4:+10022445 | None:intergenic |
| TTGGCTATCACAAGCGCGTC+AGG | 0.460396 | 4.4:-10017681 | MS.gene28118:CDS |
| GTTGCTTGGCAAGTTTAACT+GGG | 0.464029 | 4.4:-10018524 | MS.gene28118:CDS |
| GGACGCAAGCTTTCAAGACT+GGG | 0.466552 | 4.4:-10020886 | MS.gene28118:CDS |
| ACAGAGTGCACGAGCCGAAA+AGG | 0.472183 | 4.4:-10022544 | MS.gene28118:CDS |
| CTAACGCTCTGTCTCTTTCG+AGG | 0.482208 | 4.4:+10022504 | None:intergenic |
| CAGGAGTTACGTGTGACTAA+TGG | 0.482383 | 4.4:-10019972 | MS.gene28118:CDS |
| TTTAATCCAGAATAAAGGAT+TGG | 0.488019 | 4.4:-10019657 | MS.gene28118:CDS |
| TGTGGAGGGGACGTCATCCC+AGG | 0.490259 | 4.4:-10022463 | MS.gene28118:CDS |
| GAATAAAGGATTGGCTGTTG+TGG | 0.490897 | 4.4:-10019648 | MS.gene28118:CDS |
| GGCTGTTGTGGATTGCTCGT+GGG | 0.496557 | 4.4:-10019636 | MS.gene28118:CDS |
| TATGCTGCATGGCAGTTGTT+AGG | 0.502876 | 4.4:-10017435 | MS.gene28118:intron |
| CAAAATCAAGCTTGCAATGT+GGG | 0.510512 | 4.4:-10021285 | MS.gene28118:intron |
| TGGAAGCCCATCATCAGAAT+CGG | 0.511595 | 4.4:+10017381 | None:intergenic |
| GAAACAGCAAATCTGTTGCT+TGG | 0.521180 | 4.4:-10018538 | MS.gene28118:CDS |
| CAGTCTTGAAAGCTTGCGTC+CGG | 0.521650 | 4.4:+10020888 | None:intergenic |
| CTCGAAAGAGACAGAGCGTT+AGG | 0.525486 | 4.4:-10022503 | MS.gene28118:CDS |
| ATGGGCTTCCACCTCTTGAA+AGG | 0.540522 | 4.4:-10017369 | MS.gene28118:CDS |
| CAGGAAGAGTGATGATGTGG+AGG | 0.544289 | 4.4:-10022478 | MS.gene28118:CDS |
| TTCATGTTCCTTTCAAGAGG+TGG | 0.548622 | 4.4:+10017361 | None:intergenic |
| GGAGGGGACGTCATCCCAGG+TGG | 0.550796 | 4.4:-10022460 | MS.gene28118:CDS |
| ACTCTTCCGATTCTGATGAT+GGG | 0.551069 | 4.4:-10017387 | MS.gene28118:CDS |
| GGGTTTGCCGCTACAAGCCA+TGG | 0.551853 | 4.4:+10018978 | None:intergenic |
| TCTGTCTCTTTCGAGGAGCA+TGG | 0.553581 | 4.4:+10022511 | None:intergenic |
| TGGCTGTTGTGGATTGCTCG+TGG | 0.556974 | 4.4:-10019637 | MS.gene28118:CDS |
| TGATTCATGTTCCTTTCAAG+AGG | 0.557002 | 4.4:+10017358 | None:intergenic |
| TGCAGTGCCATGGCTTGTAG+CGG | 0.560226 | 4.4:-10018985 | MS.gene28118:intron |
| GATCAGGAAGAGTGATGATG+TGG | 0.564693 | 4.4:-10022481 | MS.gene28118:CDS |
| GAGGGGACGTCATCCCAGGT+GGG | 0.581754 | 4.4:-10022459 | MS.gene28118:intron |
| TATTGTCAAAGCAGCAGCCA+AGG | 0.583613 | 4.4:+10018914 | None:intergenic |
| TCTAACTGCAGAACCTTGTG+AGG | 0.588442 | 4.4:-10021342 | MS.gene28118:intron |
| ATGTCAGCTATCTTGTGTAG+AGG | 0.595536 | 4.4:-10018937 | MS.gene28118:CDS |
| CTACCTGGACGCACCCACCT+GGG | 0.598310 | 4.4:+10022446 | None:intergenic |
| AGGAAGAGTGATGATGTGGA+GGG | 0.606958 | 4.4:-10022477 | MS.gene28118:CDS |
| GGGTGATAATGAAGAATCAG+AGG | 0.611722 | 4.4:-10021321 | MS.gene28118:CDS |
| TCTTCATTATCACCCTCACA+AGG | 0.612623 | 4.4:+10021329 | None:intergenic |
| TTGCTTGGCAAGTTTAACTG+GGG | 0.613832 | 4.4:-10018523 | MS.gene28118:CDS |
| CCAATACAGGGAATTACTGA+AGG | 0.625012 | 4.4:-10017753 | MS.gene28118:intron |
| ACAAGCGCGTCAGGTTCCAA+AGG | 0.626008 | 4.4:-10017672 | MS.gene28118:CDS |
| GGAAGAGTGATGATGTGGAG+GGG | 0.630416 | 4.4:-10022476 | MS.gene28118:CDS |
| CAAACCCAATAAATTATGGT+CGG | 0.643896 | 4.4:-10018962 | MS.gene28118:CDS |
| TCTACACAAGATAGCTGACA+TGG | 0.652062 | 4.4:+10018939 | None:intergenic |
| CCAAAATCAAGCTTGCAATG+TGG | 0.658475 | 4.4:-10021286 | MS.gene28118:CDS |
| TATAAGTTCATACAGAGGCG+AGG | 0.658960 | 4.4:+10019569 | None:intergenic |
| CACAGACCTTCACTATCAGT+AGG | 0.664914 | 4.4:+10017647 | None:intergenic |
| CTAACTGCAGAACCTTGTGA+GGG | 0.666455 | 4.4:-10021341 | MS.gene28118:intron |
| AAGGCTCCTACTGATAGTGA+AGG | 0.667476 | 4.4:-10017653 | MS.gene28118:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTTGAATAAAAATTT+AGG | - | chr4.4:10021078-10021097 | MS.gene28118:intron | 10.0% |
| !!! | TTTTGTTTAATTATATGAAT+GGG | - | chr4.4:10019432-10019451 | MS.gene28118:intron | 10.0% |
| !! | AATTTGATTCTCAATTATAT+GGG | - | chr4.4:10021947-10021966 | MS.gene28118:intron | 15.0% |
| !! | ATATAATTGAGAATCAAATT+CGG | + | chr4.4:10021947-10021966 | None:intergenic | 15.0% |
| !! | CAAAGTAAATTATTAAGTTT+GGG | + | chr4.4:10021104-10021123 | None:intergenic | 15.0% |
| !! | TTAAATTAGTTGCAAAATAT+TGG | - | chr4.4:10019145-10019164 | MS.gene28118:intron | 15.0% |
| !! | TTATTGAAATGAAAACTATT+TGG | - | chr4.4:10021164-10021183 | MS.gene28118:intron | 15.0% |
| !!! | CAAAAAATTGATGATATAAA+AGG | - | chr4.4:10019609-10019628 | MS.gene28118:CDS | 15.0% |
| !!! | CATTATTTTTTACATTCAAT+AGG | - | chr4.4:10018941-10018960 | MS.gene28118:CDS | 15.0% |
| !!! | CTTTTGTTTAATTATATGAA+TGG | - | chr4.4:10019431-10019450 | MS.gene28118:intron | 15.0% |
| !!! | TGTTATATATCTATTTTACA+CGG | - | chr4.4:10022139-10022158 | MS.gene28118:intron | 15.0% |
| !!! | TGTTTTTTATACAATTTCTT+TGG | - | chr4.4:10019561-10019580 | MS.gene28118:intron | 15.0% |
| !!! | TTAACAAAAAAATTTGTTCA+TGG | + | chr4.4:10021611-10021630 | None:intergenic | 15.0% |
| !! | AAAAATTCACAATATATCAG+AGG | + | chr4.4:10022284-10022303 | None:intergenic | 20.0% |
| !! | AAATCTAATATTTCATATGG+AGG | - | chr4.4:10019372-10019391 | MS.gene28118:intron | 20.0% |
| !! | ACAGTTAAATTATGTTCATA+AGG | + | chr4.4:10018546-10018565 | None:intergenic | 20.0% |
| !! | ATTGTAAAGAGATTAAAACA+TGG | - | chr4.4:10017971-10017990 | MS.gene28118:intron | 20.0% |
| !! | ATTTGATTCTCAATTATATG+GGG | - | chr4.4:10021948-10021967 | MS.gene28118:intron | 20.0% |
| !! | CTTATAAATATGCTTCATAA+AGG | + | chr4.4:10021524-10021543 | None:intergenic | 20.0% |
| !! | CTTATTATATAATATGTCAG+TGG | - | chr4.4:10019743-10019762 | MS.gene28118:intron | 20.0% |
| !! | GAATTTGATTCTCAATTATA+TGG | - | chr4.4:10021946-10021965 | MS.gene28118:intron | 20.0% |
| !! | GCAAAGTAAATTATTAAGTT+TGG | + | chr4.4:10021105-10021124 | None:intergenic | 20.0% |
| !! | TAGTTATGTATAGATAACTA+GGG | - | chr4.4:10021665-10021684 | MS.gene28118:intron | 20.0% |
| !! | TCCAAATCTAATATTTCATA+TGG | - | chr4.4:10019369-10019388 | MS.gene28118:intron | 20.0% |
| !! | TCCATATGAAATATTAGATT+TGG | + | chr4.4:10019373-10019392 | None:intergenic | 20.0% |
| !! | TCTTAAAAACGTTAATAAGA+AGG | + | chr4.4:10019867-10019886 | None:intergenic | 20.0% |
| !! | TTAATAATTTACTTTGCAGT+TGG | - | chr4.4:10021108-10021127 | MS.gene28118:intron | 20.0% |
| !! | TTAGTTATGTATAGATAACT+AGG | - | chr4.4:10021664-10021683 | MS.gene28118:intron | 20.0% |
| !! | TTCACTTATGATATTTACAA+GGG | - | chr4.4:10021342-10021361 | MS.gene28118:intron | 20.0% |
| !! | TTGAATAATAAGGGTAAATA+TGG | + | chr4.4:10017598-10017617 | None:intergenic | 20.0% |
| !! | TTTCACTTATGATATTTACA+AGG | - | chr4.4:10021341-10021360 | MS.gene28118:intron | 20.0% |
| !!! | AAATTGATGATATAAAAGGT+TGG | - | chr4.4:10019613-10019632 | MS.gene28118:CDS | 20.0% |
| !!! | AATTTCATGTATAGTTTTAG+AGG | + | chr4.4:10019240-10019259 | None:intergenic | 20.0% |
| !!! | CAATATTTTGTTTTCTCTTT+TGG | - | chr4.4:10019956-10019975 | MS.gene28118:CDS | 20.0% |
| !!! | CTTTACAATATTCATCATTT+TGG | + | chr4.4:10017960-10017979 | None:intergenic | 20.0% |
| !!! | GATTAGTTTTTGTTTTTTTC+TGG | - | chr4.4:10019056-10019075 | MS.gene28118:intron | 20.0% |
| !!! | GTTATATATCTATTTTACAC+GGG | - | chr4.4:10022140-10022159 | MS.gene28118:intron | 20.0% |
| !!! | TTATATATCTATTTTACACG+GGG | - | chr4.4:10022141-10022160 | MS.gene28118:intron | 20.0% |
| !!! | TTATTTCTGTTCAAAATGAT+TGG | - | chr4.4:10022061-10022080 | MS.gene28118:intron | 20.0% |
| !!! | TTTTTATATCATGAACTACA+AGG | + | chr4.4:10021463-10021482 | None:intergenic | 20.0% |
| ! | AAAAGGAAATGAAGAAAAAG+AGG | + | chr4.4:10017829-10017848 | None:intergenic | 25.0% |
| ! | AAACAAAATATTGCTTCACA+AGG | + | chr4.4:10019949-10019968 | None:intergenic | 25.0% |
| ! | AAGTTATGTAAGTTACGTTA+CGG | + | chr4.4:10021492-10021511 | None:intergenic | 25.0% |
| ! | AGTTAAATGAAAAAAGCAAC+AGG | - | chr4.4:10021406-10021425 | MS.gene28118:intron | 25.0% |
| ! | ATAAGCTACTATTCTAACAA+AGG | + | chr4.4:10018576-10018595 | None:intergenic | 25.0% |
| ! | ATATTCTTAACCTAATTGTG+TGG | + | chr4.4:10017347-10017366 | None:intergenic | 25.0% |
| ! | ATCAAATTAATACAGGTACA+AGG | + | chr4.4:10019011-10019030 | None:intergenic | 25.0% |
| ! | ATCAGCCAACATAAAAAATA+CGG | + | chr4.4:10020975-10020994 | None:intergenic | 25.0% |
| ! | CAATTAGGTTAAGAATATGA+AGG | - | chr4.4:10017349-10017368 | MS.gene28118:CDS | 25.0% |
| ! | CATATTAGATCTCTCAATTA+AGG | + | chr4.4:10021776-10021795 | None:intergenic | 25.0% |
| ! | CATGATATTAGATCCAAATT+CGG | + | chr4.4:10018798-10018817 | None:intergenic | 25.0% |
| ! | CATTACATTATTTGTGATTG+AGG | + | chr4.4:10020744-10020763 | None:intergenic | 25.0% |
| ! | CTTCAACATCAAATTAATAC+AGG | + | chr4.4:10019018-10019037 | None:intergenic | 25.0% |
| ! | CTTCTTAATACTTTACTGTT+CGG | + | chr4.4:10018167-10018186 | None:intergenic | 25.0% |
| ! | GTGAAACAAATATCAATTAG+AGG | + | chr4.4:10019192-10019211 | None:intergenic | 25.0% |
| ! | GTTAAATGAAAAAAGCAACA+GGG | - | chr4.4:10021407-10021426 | MS.gene28118:intron | 25.0% |
| ! | GTTGATTATGTAATCTATGA+AGG | - | chr4.4:10019697-10019716 | MS.gene28118:CDS | 25.0% |
| ! | GTTTAATTATATGAATGGGT+AGG | - | chr4.4:10019436-10019455 | MS.gene28118:intron | 25.0% |
| ! | TAATTCCAGTATTCATTTGT+AGG | + | chr4.4:10021569-10021588 | None:intergenic | 25.0% |
| ! | TACTCTTTAATCCAGAATAA+AGG | - | chr4.4:10020099-10020118 | MS.gene28118:intron | 25.0% |
| ! | TATTCTTAACCTAATTGTGT+GGG | + | chr4.4:10017346-10017365 | None:intergenic | 25.0% |
| ! | TTATTTATGACTAGACACTT+TGG | - | chr4.4:10020892-10020911 | MS.gene28118:CDS | 25.0% |
| ! | TTGACAAAAAAAACTCTGTT+TGG | - | chr4.4:10017449-10017468 | MS.gene28118:intron | 25.0% |
| ! | TTGACAATATGGTATAGAAA+TGG | - | chr4.4:10020861-10020880 | MS.gene28118:intron | 25.0% |
| ! | TTTAATCCAGAATAAAGGAT+TGG | - | chr4.4:10020104-10020123 | MS.gene28118:intron | 25.0% |
| !! | AAATAATTTCAGCACTGTTT+TGG | + | chr4.4:10022047-10022066 | None:intergenic | 25.0% |
| !! | AACTTTCTTTTAACCAATAC+AGG | - | chr4.4:10021995-10022014 | MS.gene28118:intron | 25.0% |
| !! | ACTTTCTTTTAACCAATACA+GGG | - | chr4.4:10021996-10022015 | MS.gene28118:intron | 25.0% |
| !! | ATTACCAATGCGTTTTTAAA+TGG | - | chr4.4:10021053-10021072 | MS.gene28118:intron | 25.0% |
| !! | ATTTCAGATACAATTTTTGC+AGG | + | chr4.4:10020944-10020963 | None:intergenic | 25.0% |
| !! | GAATGAATTTTGTTCACAAT+TGG | + | chr4.4:10021880-10021899 | None:intergenic | 25.0% |
| !! | TTTCAGATACAATTTTTGCA+GGG | + | chr4.4:10020943-10020962 | None:intergenic | 25.0% |
| !!! | AGCTTTTGCTTTGAATAATA+AGG | + | chr4.4:10017608-10017627 | None:intergenic | 25.0% |
| !!! | ATTTGTTTTTAATCTGACAC+TGG | - | chr4.4:10022463-10022482 | MS.gene28118:CDS | 25.0% |
| !!! | CTTTTTTCATTTAACTGTGT+GGG | + | chr4.4:10021402-10021421 | None:intergenic | 25.0% |
| !!! | GCTTTTGCTTTGAATAATAA+GGG | + | chr4.4:10017607-10017626 | None:intergenic | 25.0% |
| !!! | TTAAAATGGTTTTGAATGCT+AGG | - | chr4.4:10019101-10019120 | MS.gene28118:intron | 25.0% |
| AAAAGATGAAGAGAAGTAGA+AGG | - | chr4.4:10017756-10017775 | MS.gene28118:intron | 30.0% | |
| AAAATATTGGACGATCACAT+TGG | - | chr4.4:10019158-10019177 | MS.gene28118:intron | 30.0% | |
| AATAACGTCGTGTTGAAATT+TGG | - | chr4.4:10020351-10020370 | MS.gene28118:intron | 30.0% | |
| ATAACGTCGTGTTGAAATTT+GGG | - | chr4.4:10020352-10020371 | MS.gene28118:intron | 30.0% | |
| ATAATTTACTTTGCAGTTGG+TGG | - | chr4.4:10021111-10021130 | MS.gene28118:intron | 30.0% | |
| ATCAGATACAAGAGTAATCA+AGG | + | chr4.4:10021743-10021762 | None:intergenic | 30.0% | |
| ATCATACTTGAAGTATGAAG+AGG | - | chr4.4:10019315-10019334 | MS.gene28118:intron | 30.0% | |
| ATTCTTAACCTAATTGTGTG+GGG | + | chr4.4:10017345-10017364 | None:intergenic | 30.0% | |
| CAAACCCAATAAATTATGGT+CGG | - | chr4.4:10020799-10020818 | MS.gene28118:intron | 30.0% | |
| CAGATACTATGATATCTCTA+TGG | + | chr4.4:10019522-10019541 | None:intergenic | 30.0% | |
| CTAATATCATGCATGTCATT+GGG | - | chr4.4:10018807-10018826 | MS.gene28118:intron | 30.0% | |
| CTCTTGAGAAGAGTTTATAA+AGG | + | chr4.4:10020404-10020423 | None:intergenic | 30.0% | |
| CTGATACCATGTTGAAATTT+GGG | - | chr4.4:10020537-10020556 | MS.gene28118:intron | 30.0% | |
| GAGAAGAGTTTATAAAGATG+AGG | + | chr4.4:10020399-10020418 | None:intergenic | 30.0% | |
| GATTAAAGAGTAATCTTCTC+TGG | + | chr4.4:10020091-10020110 | None:intergenic | 30.0% | |
| GGCAAAAAGATTAAATGCAA+TGG | + | chr4.4:10020708-10020727 | None:intergenic | 30.0% | |
| TAGATAAAAGATTGAACGCA+TGG | + | chr4.4:10022191-10022210 | None:intergenic | 30.0% | |
| TCAGATACAAGAGTAATCAA+GGG | + | chr4.4:10021742-10021761 | None:intergenic | 30.0% | |
| TCAGCCAACATAAAAAATAC+GGG | + | chr4.4:10020974-10020993 | None:intergenic | 30.0% | |
| TCTAATATCATGCATGTCAT+TGG | - | chr4.4:10018806-10018825 | MS.gene28118:intron | 30.0% | |
| TCTGATACCATGTTGAAATT+TGG | - | chr4.4:10020536-10020555 | MS.gene28118:intron | 30.0% | |
| TGACTCAATTAACGTTTATG+TGG | + | chr4.4:10017931-10017950 | None:intergenic | 30.0% | |
| TGATACCATGTTGAAATTTG+GGG | - | chr4.4:10020538-10020557 | MS.gene28118:intron | 30.0% | |
| TGTTCCATTTAAAAACGCAT+TGG | + | chr4.4:10021060-10021079 | None:intergenic | 30.0% | |
| TTGTGAGTGCAAATACATAT+TGG | - | chr4.4:10018971-10018990 | MS.gene28118:CDS | 30.0% | |
| TTTCATGGAAACGAAACAAT+TGG | + | chr4.4:10021902-10021921 | None:intergenic | 30.0% | |
| ! | ATAAAAGGTTGGTTGGTTAA+TGG | - | chr4.4:10019624-10019643 | MS.gene28118:CDS | 30.0% |
| ! | ATGTTCATAAGGTATCTTTG+AGG | + | chr4.4:10018535-10018554 | None:intergenic | 30.0% |
| ! | ATTTTTATGGAACCCAAAGT+TGG | - | chr4.4:10018713-10018732 | MS.gene28118:intron | 30.0% |
| ! | GAAGAAATCTTTAAGTATCG+TGG | + | chr4.4:10020680-10020699 | None:intergenic | 30.0% |
| ! | TAATCTTTTTGCCTCGTTTA+GGG | - | chr4.4:10020715-10020734 | MS.gene28118:intron | 30.0% |
| ! | TGATGATATAAAAGGTTGGT+TGG | - | chr4.4:10019617-10019636 | MS.gene28118:CDS | 30.0% |
| ! | TTAATCTTTTTGCCTCGTTT+AGG | - | chr4.4:10020714-10020733 | MS.gene28118:intron | 30.0% |
| ! | TTCAGATACAATTTTTGCAG+GGG | + | chr4.4:10020942-10020961 | None:intergenic | 30.0% |
| !! | GTATTTTCACTTTGCTATCT+AGG | - | chr4.4:10021314-10021333 | MS.gene28118:CDS | 30.0% |
| !!! | AGAGCTAAAAGCTCTTTTTT+TGG | + | chr4.4:10017406-10017425 | None:intergenic | 30.0% |
| !!! | AGCTAAAAGCTCTTTTTTTG+GGG | + | chr4.4:10017404-10017423 | None:intergenic | 30.0% |
| !!! | GAGCTAAAAGCTCTTTTTTT+GGG | + | chr4.4:10017405-10017424 | None:intergenic | 30.0% |
| !!! | GCTTTTTTCATTTAACTGTG+TGG | + | chr4.4:10021403-10021422 | None:intergenic | 30.0% |
| AAAGAAATCAAGAGGGACTT+TGG | + | chr4.4:10021436-10021455 | None:intergenic | 35.0% | |
| AAATACAGTAGTGTAGAACC+AGG | - | chr4.4:10020257-10020276 | MS.gene28118:intron | 35.0% | |
| AAGAAATCAAGAGGGACTTT+GGG | + | chr4.4:10021435-10021454 | None:intergenic | 35.0% | |
| AAGCGTATAAGTTCATACAG+AGG | + | chr4.4:10020200-10020219 | None:intergenic | 35.0% | |
| AAGGTTCGAAAGAAATCAAG+AGG | + | chr4.4:10021444-10021463 | None:intergenic | 35.0% | |
| ACCGCAGATTAAAGTAATTG+TGG | + | chr4.4:10019490-10019509 | None:intergenic | 35.0% | |
| ACGAGCTTATAGCTTATTTC+AGG | - | chr4.4:10017497-10017516 | MS.gene28118:intron | 35.0% | |
| ACTTTAATCTGCGGTAATAC+TGG | - | chr4.4:10019495-10019514 | MS.gene28118:intron | 35.0% | |
| AGCTTATTTCAGGAGCTTAT+AGG | - | chr4.4:10017507-10017526 | MS.gene28118:intron | 35.0% | |
| AGGAGATTAACGATGTTACT+CGG | - | chr4.4:10017776-10017795 | MS.gene28118:intron | 35.0% | |
| AGGTTCGAAAGAAATCAAGA+GGG | + | chr4.4:10021443-10021462 | None:intergenic | 35.0% | |
| AGTAGTTATTCAGCGAACAA+AGG | + | chr4.4:10020027-10020046 | None:intergenic | 35.0% | |
| ATCATCAAACCTAGCAACTT+CGG | + | chr4.4:10017724-10017743 | None:intergenic | 35.0% | |
| ATGGCCGACCATAATTTATT+GGG | + | chr4.4:10020806-10020825 | None:intergenic | 35.0% | |
| CAAAATCAAGCTTGCAATGT+GGG | - | chr4.4:10018476-10018495 | MS.gene28118:intron | 35.0% | |
| CAGATACAAGAGTAATCAAG+GGG | + | chr4.4:10021741-10021760 | None:intergenic | 35.0% | |
| CAGTACCTACAAATGAATAC+TGG | - | chr4.4:10021561-10021580 | MS.gene28118:intron | 35.0% | |
| CCCACAATTACTTTAATCTG+CGG | - | chr4.4:10019486-10019505 | MS.gene28118:intron | 35.0% | |
| CCGCAGATTAAAGTAATTGT+GGG | + | chr4.4:10019489-10019508 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr4.4:10020562-10020581 | MS.gene28118:intron | 35.0% | |
| CTCTTCATCACTATTGTCTA+TGG | + | chr4.4:10022434-10022453 | None:intergenic | 35.0% | |
| CTGTGAACTAAAGGAGTTTA+TGG | - | chr4.4:10021845-10021864 | MS.gene28118:intron | 35.0% | |
| GAATCTGATATATCTTGTGC+AGG | - | chr4.4:10019770-10019789 | MS.gene28118:intron | 35.0% | |
| GAGAAGAGTTTATAAAGGTG+AGG | + | chr4.4:10020606-10020625 | None:intergenic | 35.0% | |
| GATATTAGATCCAAATTCGG+CGG | + | chr4.4:10018795-10018814 | None:intergenic | 35.0% | |
| GCACAAGATATATCAGATTC+AGG | + | chr4.4:10019770-10019789 | None:intergenic | 35.0% | |
| TAACGTCGTGTTGAAATTTG+GGG | - | chr4.4:10020353-10020372 | MS.gene28118:intron | 35.0% | |
| TATGAAGGAGAAGAAGATGA+AGG | - | chr4.4:10017364-10017383 | MS.gene28118:CDS | 35.0% | |
| TCTTTGGACAAAGAATCTAG+TGG | - | chr4.4:10019577-10019596 | MS.gene28118:intron | 35.0% | |
| TGATTCATGTTCCTTTCAAG+AGG | + | chr4.4:10022406-10022425 | None:intergenic | 35.0% | |
| TTTCGTTGTCTAGTGATAGT+TGG | + | chr4.4:10018309-10018328 | None:intergenic | 35.0% | |
| TTTGTTTCACATGCTTTCAC+TGG | - | chr4.4:10019202-10019221 | MS.gene28118:intron | 35.0% | |
| ! | CACATTGCAAGCTTGATTTT+GGG | + | chr4.4:10018477-10018496 | None:intergenic | 35.0% |
| ! | TAAACTCCTTTAGTTCACAG+TGG | + | chr4.4:10021845-10021864 | None:intergenic | 35.0% |
| ! | TACGTGTGACTAATGGTTTT+GGG | - | chr4.4:10019796-10019815 | MS.gene28118:intron | 35.0% |
| ! | TAGAGTTTTTGTAATGCCAC+AGG | - | chr4.4:10019463-10019482 | MS.gene28118:intron | 35.0% |
| ! | TCAGATACAATTTTTGCAGG+GGG | + | chr4.4:10020941-10020960 | None:intergenic | 35.0% |
| ! | TCTCGGATTGTGGATTTTTA+TGG | - | chr4.4:10018700-10018719 | MS.gene28118:intron | 35.0% |
| ! | TTACGTGTGACTAATGGTTT+TGG | - | chr4.4:10019795-10019814 | MS.gene28118:intron | 35.0% |
| ! | TTCTTTTTATTGCAGTGCCA+TGG | - | chr4.4:10020766-10020785 | MS.gene28118:intron | 35.0% |
| !! | GCTTTTAGCTGATAAGTGTT+TGG | + | chr4.4:10017645-10017664 | None:intergenic | 35.0% |
| !! | TTGTGTTTTTACAGTCCAGT+TGG | - | chr4.4:10020051-10020070 | MS.gene28118:intron | 35.0% |
| !!! | ACTGTTTTGGCATTTAGAGT+AGG | + | chr4.4:10022034-10022053 | None:intergenic | 35.0% |
| !!! | GTGTCCCGTATTTTTTATGT+TGG | - | chr4.4:10020967-10020986 | MS.gene28118:intron | 35.0% |
| !!! | TGTTCGGTTCGTGTTTTTTT+AGG | + | chr4.4:10018151-10018170 | None:intergenic | 35.0% |
| AACTCTTCCGATTCTGATGA+TGG | - | chr4.4:10022373-10022392 | MS.gene28118:intron | 40.0% | |
| AACTTCACAGCTAGACGAAA+TGG | - | chr4.4:10019908-10019927 | MS.gene28118:intron | 40.0% | |
| AAGAAGATGAAGGCTCTGTT+TGG | - | chr4.4:10017374-10017393 | MS.gene28118:CDS | 40.0% | |
| ACAATCCGAGATACTCTTAG+AGG | + | chr4.4:10018691-10018710 | None:intergenic | 40.0% | |
| ACGTTATTGCCAGATAGTAG+CGG | + | chr4.4:10020339-10020358 | None:intergenic | 40.0% | |
| ACTCTTCCGATTCTGATGAT+GGG | - | chr4.4:10022374-10022393 | MS.gene28118:intron | 40.0% | |
| ACTTCACAGCTAGACGAAAT+GGG | - | chr4.4:10019909-10019928 | MS.gene28118:intron | 40.0% | |
| AGGAGTAGAAACAGAGTCAT+TGG | - | chr4.4:10019121-10019140 | MS.gene28118:intron | 40.0% | |
| AGTTTGTGAACAGCACATTG+CGG | + | chr4.4:10021019-10021038 | None:intergenic | 40.0% | |
| ATCAGAGCTTGTCGAATTCA+AGG | + | chr4.4:10020522-10020541 | None:intergenic | 40.0% | |
| ATGTCAGCTATCTTGTGTAG+AGG | - | chr4.4:10020824-10020843 | MS.gene28118:intron | 40.0% | |
| CAACAGCCAATCCTTTATTC+TGG | + | chr4.4:10020113-10020132 | None:intergenic | 40.0% | |
| CATGGCCGACCATAATTTAT+TGG | + | chr4.4:10020807-10020826 | None:intergenic | 40.0% | |
| CATGTTAGACACGGATTTCA+TGG | + | chr4.4:10021917-10021936 | None:intergenic | 40.0% | |
| CCAAAATCAAGCTTGCAATG+TGG | - | chr4.4:10018475-10018494 | MS.gene28118:intron | 40.0% | |
| CCAATACAGGGAATTACTGA+AGG | - | chr4.4:10022008-10022027 | MS.gene28118:intron | 40.0% | |
| CCTAACAATCATAGCTAGTG+AGG | + | chr4.4:10021691-10021710 | None:intergenic | 40.0% | |
| CCTCACTAGCTATGATTGTT+AGG | - | chr4.4:10021688-10021707 | MS.gene28118:intron | 40.0% | |
| CCTTCAGTAATTCCCTGTAT+TGG | + | chr4.4:10022011-10022030 | None:intergenic | 40.0% | |
| CTGCGATACTGGAATCAATA+TGG | - | chr4.4:10022503-10022522 | MS.gene28118:CDS | 40.0% | |
| GAAAATCAAAGCTGCGTTCA+AGG | - | chr4.4:10018325-10018344 | MS.gene28118:intron | 40.0% | |
| GAAACAGCAAATCTGTTGCT+TGG | - | chr4.4:10021223-10021242 | MS.gene28118:intron | 40.0% | |
| GCGGCAAACCCAATAAATTA+TGG | - | chr4.4:10020795-10020814 | MS.gene28118:intron | 40.0% | |
| GCTTTCACTGGAGTAATCTT+AGG | - | chr4.4:10019214-10019233 | MS.gene28118:intron | 40.0% | |
| GGTAACACAAAAGCTCTGTT+TGG | - | chr4.4:10017470-10017489 | MS.gene28118:intron | 40.0% | |
| GGTGAATCACATGTTAGACA+CGG | + | chr4.4:10021926-10021945 | None:intergenic | 40.0% | |
| GTACAGTGAAATTGTGTGCT+AGG | + | chr4.4:10021802-10021821 | None:intergenic | 40.0% | |
| GTGAAACCACTGTGAACTAA+AGG | - | chr4.4:10021836-10021855 | MS.gene28118:intron | 40.0% | |
| GTTGCTTGGCAAGTTTAACT+GGG | - | chr4.4:10021237-10021256 | MS.gene28118:intron | 40.0% | |
| TAGAACCAGGTTGTCAATAG+CGG | - | chr4.4:10020270-10020289 | MS.gene28118:intron | 40.0% | |
| TAGAGTGGGAATAGTGGTTA+CGG | + | chr4.4:10018741-10018760 | None:intergenic | 40.0% | |
| TATAAGTTCATACAGAGGCG+AGG | + | chr4.4:10020195-10020214 | None:intergenic | 40.0% | |
| TCAGAGCTTGTCGAATTCAA+GGG | + | chr4.4:10020521-10020540 | None:intergenic | 40.0% | |
| TCTACACAAGATAGCTGACA+TGG | + | chr4.4:10020825-10020844 | None:intergenic | 40.0% | |
| TCTTCATTATCACCCTCACA+AGG | + | chr4.4:10018435-10018454 | None:intergenic | 40.0% | |
| TTAAAGTAATTGTGGGCCTG+TGG | + | chr4.4:10019482-10019501 | None:intergenic | 40.0% | |
| TTAGGCCCCAAATTTCAACA+TGG | + | chr4.4:10020361-10020380 | None:intergenic | 40.0% | |
| TTCATGGCTACATACAGAGA+TGG | + | chr4.4:10021595-10021614 | None:intergenic | 40.0% | |
| TTCATGTTCCTTTCAAGAGG+TGG | + | chr4.4:10022403-10022422 | None:intergenic | 40.0% | |
| TTGCTTGGCAAGTTTAACTG+GGG | - | chr4.4:10021238-10021257 | MS.gene28118:intron | 40.0% | |
| ! | AAAAAGAGGCATGTGAGATG+AGG | + | chr4.4:10017815-10017834 | None:intergenic | 40.0% |
| ! | ACGCTAAAGTAAGGCTTGTT+TGG | + | chr4.4:10018658-10018677 | None:intergenic | 40.0% |
| ! | AGAGTCTTATCTATCCGATG+TGG | - | chr4.4:10020420-10020439 | MS.gene28118:intron | 40.0% |
| ! | ATATGGAGGAAGCCTTTTGA+GGG | - | chr4.4:10019386-10019405 | MS.gene28118:intron | 40.0% |
| ! | CCACATTGCAAGCTTGATTT+TGG | + | chr4.4:10018478-10018497 | None:intergenic | 40.0% |
| ! | CTTGGTGCATGAATAGGTTT+AGG | - | chr4.4:10020492-10020511 | MS.gene28118:intron | 40.0% |
| ! | GGGTGATAATGAAGAATCAG+AGG | - | chr4.4:10018440-10018459 | MS.gene28118:intron | 40.0% |
| ! | TGAAGTATGAAGAGGCATAG+AGG | - | chr4.4:10019323-10019342 | MS.gene28118:intron | 40.0% |
| ! | TGTTGCTTGGCAAGTTTAAC+TGG | - | chr4.4:10021236-10021255 | MS.gene28118:intron | 40.0% |
| !! | ACGTGTGACTAATGGTTTTG+GGG | - | chr4.4:10019797-10019816 | MS.gene28118:intron | 40.0% |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr4.4:10020564-10020583 | None:intergenic | 40.0% |
| !! | CTATTTTACACGGGGTGTTA+TGG | - | chr4.4:10022149-10022168 | MS.gene28118:intron | 40.0% |
| !! | GAATAAAGGATTGGCTGTTG+TGG | - | chr4.4:10020113-10020132 | MS.gene28118:intron | 40.0% |
| !! | GGGAATTGCTTTAAGGTACT+TGG | - | chr4.4:10019818-10019837 | MS.gene28118:intron | 40.0% |
| !! | GTTGCTAGGTTTGATGATGT+TGG | - | chr4.4:10017726-10017745 | MS.gene28118:CDS | 40.0% |
| !! | TCTAAGAGTATCTCGGATTG+TGG | - | chr4.4:10018690-10018709 | MS.gene28118:intron | 40.0% |
| !!! | GTTTTGGGGGAATTGCTTTA+AGG | - | chr4.4:10019811-10019830 | MS.gene28118:intron | 40.0% |
| !!! | TTTTTTCCTCCTATGCTGCA+TGG | - | chr4.4:10022315-10022334 | MS.gene28118:intron | 40.0% |
| AACCACTATTCCCACTCTAG+AGG | - | chr4.4:10018742-10018761 | MS.gene28118:intron | 45.0% | |
| ACATGGTACCACTATTGCAG+CGG | - | chr4.4:10020293-10020312 | MS.gene28118:intron | 45.0% | |
| AGTGGTTACGGAACCAACTT+TGG | + | chr4.4:10018729-10018748 | None:intergenic | 45.0% | |
| ATCCGAGATACTCTTAGAGG+AGG | + | chr4.4:10018688-10018707 | None:intergenic | 45.0% | |
| ATCTATCCGATGCTGGACTT+GGG | - | chr4.4:10020428-10020447 | MS.gene28118:intron | 45.0% | |
| ATCTATCCGATGTGGCACTT+GGG | - | chr4.4:10020635-10020654 | MS.gene28118:intron | 45.0% | |
| CACAGACCTTCACTATCAGT+AGG | + | chr4.4:10022117-10022136 | None:intergenic | 45.0% | |
| CAGGAGTTACGTGTGACTAA+TGG | - | chr4.4:10019789-10019808 | MS.gene28118:intron | 45.0% | |
| CGACTGGATTGAGCATGATT+GGG | + | chr4.4:10018280-10018299 | None:intergenic | 45.0% | |
| CTAACTGCAGAACCTTGTGA+GGG | - | chr4.4:10018420-10018439 | MS.gene28118:intron | 45.0% | |
| GAAAAACCCAAGTCCAGCAT+CGG | + | chr4.4:10020437-10020456 | None:intergenic | 45.0% | |
| GAAAAACCCAAGTGCCACAT+CGG | + | chr4.4:10020644-10020663 | None:intergenic | 45.0% | |
| GACTGGATTGAGCATGATTG+GGG | + | chr4.4:10018279-10018298 | None:intergenic | 45.0% | |
| GAGACACATTGCTTTCCAAC+TGG | + | chr4.4:10020069-10020088 | None:intergenic | 45.0% | |
| GAGTAATCAAGGGGCTAATC+AGG | + | chr4.4:10021732-10021751 | None:intergenic | 45.0% | |
| GGACGATCACATTGGATCAA+AGG | - | chr4.4:10019166-10019185 | MS.gene28118:intron | 45.0% | |
| GGAGGCTAAACGCTAAAGTA+AGG | + | chr4.4:10018667-10018686 | None:intergenic | 45.0% | |
| GGTGCATGAATAGGTTTAGG+CGG | - | chr4.4:10020495-10020514 | MS.gene28118:intron | 45.0% | |
| GTATACATCACCGCCGAATT+TGG | - | chr4.4:10018782-10018801 | MS.gene28118:intron | 45.0% | |
| GTGGTTACGGAACCAACTTT+GGG | + | chr4.4:10018728-10018747 | None:intergenic | 45.0% | |
| GTTGCATACATTGTCTGTGC+AGG | - | chr4.4:10022229-10022248 | MS.gene28118:intron | 45.0% | |
| GTTTGTGAACAGCACATTGC+GGG | + | chr4.4:10021018-10021037 | None:intergenic | 45.0% | |
| TAACAACTGCCATGCAGCAT+AGG | + | chr4.4:10022327-10022346 | None:intergenic | 45.0% | |
| TATCTATCCGATGCTGGACT+TGG | - | chr4.4:10020427-10020446 | MS.gene28118:intron | 45.0% | |
| TATCTATCCGATGTGGCACT+TGG | - | chr4.4:10020634-10020653 | MS.gene28118:intron | 45.0% | |
| TATGCTGCATGGCAGTTGTT+AGG | - | chr4.4:10022326-10022345 | MS.gene28118:intron | 45.0% | |
| TATTGTCAAAGCAGCAGCCA+AGG | + | chr4.4:10020850-10020869 | None:intergenic | 45.0% | |
| TCACTATCAGTAGGAGCCTT+TGG | + | chr4.4:10022108-10022127 | None:intergenic | 45.0% | |
| TCGACTGGATTGAGCATGAT+TGG | + | chr4.4:10018281-10018300 | None:intergenic | 45.0% | |
| TCTAACTGCAGAACCTTGTG+AGG | - | chr4.4:10018419-10018438 | MS.gene28118:intron | 45.0% | |
| TGGAAGCCCATCATCAGAAT+CGG | + | chr4.4:10022383-10022402 | None:intergenic | 45.0% | |
| TGTTTGCGAGAGAGAGAGAT+GGG | - | chr4.4:10018217-10018236 | MS.gene28118:intron | 45.0% | |
| TTGATTCCAGTATCGCAGCA+TGG | + | chr4.4:10022501-10022520 | None:intergenic | 45.0% | |
| TTGTTTGCGAGAGAGAGAGA+TGG | - | chr4.4:10018216-10018235 | MS.gene28118:intron | 45.0% | |
| ! | AAGGCTCCTACTGATAGTGA+AGG | - | chr4.4:10022108-10022127 | MS.gene28118:intron | 45.0% |
| ! | AGGAAGAGTGATGATGTGGA+GGG | - | chr4.4:10017284-10017303 | MS.gene28118:intron | 45.0% |
| ! | AGGATTTAGCTCCTCTAGAG+TGG | + | chr4.4:10018756-10018775 | None:intergenic | 45.0% |
| ! | CATATGGAGGAAGCCTTTTG+AGG | - | chr4.4:10019385-10019404 | MS.gene28118:intron | 45.0% |
| ! | GAGTCTTATCTATCCGATGC+TGG | - | chr4.4:10020421-10020440 | MS.gene28118:intron | 45.0% |
| ! | GATCAGGAAGAGTGATGATG+TGG | - | chr4.4:10017280-10017299 | MS.gene28118:intron | 45.0% |
| ! | GATGTTACTCGGTTTGTCCT+TGG | - | chr4.4:10017787-10017806 | MS.gene28118:intron | 45.0% |
| ! | GGCTGTTGACACAGGATTTT+GGG | - | chr4.4:10018828-10018847 | MS.gene28118:intron | 45.0% |
| ! | GGGGTGTTATGGTATGAAGT+TGG | - | chr4.4:10022160-10022179 | MS.gene28118:intron | 45.0% |
| ! | TGAAATTTGGGGCCTAACTC+AGG | - | chr4.4:10020364-10020383 | MS.gene28118:intron | 45.0% |
| ! | TGATAGTTGGTTGTGTCGAC+TGG | + | chr4.4:10018296-10018315 | None:intergenic | 45.0% |
| ! | TGTGATGCCAAAAAGTGCAC+CGG | - | chr4.4:10018854-10018873 | MS.gene28118:intron | 45.0% |
| ! | TTTTGCAGGGGGTGAATTGT+AGG | + | chr4.4:10020930-10020949 | None:intergenic | 45.0% |
| !! | CCTTACAAAACCGGCTTGTA+AGG | - | chr4.4:10020571-10020590 | MS.gene28118:intron | 45.0% |
| !! | CCTTACAAGCCGGTTTTGTA+AGG | + | chr4.4:10020574-10020593 | None:intergenic | 45.0% |
| !! | CTCCTCCTCTAAGAGTATCT+CGG | - | chr4.4:10018683-10018702 | MS.gene28118:intron | 45.0% |
| !! | GGATTTAGCTCCTCTAGAGT+GGG | + | chr4.4:10018755-10018774 | None:intergenic | 45.0% |
| !! | TGGCTGCTGCTTTGACAATA+TGG | - | chr4.4:10020850-10020869 | MS.gene28118:intron | 45.0% |
| !! | TTTGGGCTTGGTGCATGAAT+AGG | - | chr4.4:10020486-10020505 | MS.gene28118:intron | 45.0% |
| !!! | CGTGTGACTAATGGTTTTGG+GGG | - | chr4.4:10019798-10019817 | MS.gene28118:intron | 45.0% |
| !! | CAATAAAATAAAAATTAAAA+TGG | - | chr4.4:10019087-10019106 | MS.gene28118:intron | 5.0% |
| !! | TGAATTAAATAAAATAAAAA+AGG | + | chr4.4:10017846-10017865 | None:intergenic | 5.0% |
| AAGCCAAACCGCTGCAATAG+TGG | + | chr4.4:10020304-10020323 | None:intergenic | 50.0% | |
| AGGCAATCCTCACCTGAGTT+AGG | + | chr4.4:10020379-10020398 | None:intergenic | 50.0% | |
| AGGGGCTAATCAGGAGCTAA+TGG | + | chr4.4:10021723-10021742 | None:intergenic | 50.0% | |
| AGTATCGTGGTGCGACGTAT+TGG | + | chr4.4:10020667-10020686 | None:intergenic | 50.0% | |
| ATGGGCTTCCACCTCTTGAA+AGG | - | chr4.4:10022392-10022411 | MS.gene28118:intron | 50.0% | |
| CAAACAGAGCCGAAGTTGCT+AGG | - | chr4.4:10017712-10017731 | MS.gene28118:CDS | 50.0% | |
| CAGTCTTGAAAGCTTGCGTC+CGG | + | chr4.4:10018876-10018895 | None:intergenic | 50.0% | |
| CATGTCCGCTATTGACAACC+TGG | + | chr4.4:10020278-10020297 | None:intergenic | 50.0% | |
| CATGTTGCCTTGCCCTCAAA+AGG | + | chr4.4:10019401-10019420 | None:intergenic | 50.0% | |
| CGAGATACTCTTAGAGGAGG+AGG | + | chr4.4:10018685-10018704 | None:intergenic | 50.0% | |
| CTAACGCTCTGTCTCTTTCG+AGG | + | chr4.4:10017260-10017279 | None:intergenic | 50.0% | |
| CTAGCAACTTCGGCTCTGTT+TGG | + | chr4.4:10017714-10017733 | None:intergenic | 50.0% | |
| CTCTAACCATGCTGCGATAC+TGG | - | chr4.4:10022492-10022511 | MS.gene28118:CDS | 50.0% | |
| CTTCTGCATCAACGCAGTCA+AGG | + | chr4.4:10018115-10018134 | None:intergenic | 50.0% | |
| GATTGAGGCAACCCTAAACG+AGG | + | chr4.4:10020729-10020748 | None:intergenic | 50.0% | |
| GCAATCCTCACCTTACAAGC+CGG | + | chr4.4:10020584-10020603 | None:intergenic | 50.0% | |
| GCATGTGAGATGAGGTTCCA+AGG | + | chr4.4:10017807-10017826 | None:intergenic | 50.0% | |
| GCGGTGATGTATACAGTGGT+AGG | + | chr4.4:10018776-10018795 | None:intergenic | 50.0% | |
| GCTATCTTGTGTAGAGGCCT+TGG | - | chr4.4:10020830-10020849 | MS.gene28118:intron | 50.0% | |
| GGACGCAAGCTTTCAAGACT+GGG | - | chr4.4:10018875-10018894 | MS.gene28118:intron | 50.0% | |
| GTACCACTATTGCAGCGGTT+TGG | - | chr4.4:10020298-10020317 | MS.gene28118:intron | 50.0% | |
| GTATCGTGGTGCGACGTATT+GGG | + | chr4.4:10020666-10020685 | None:intergenic | 50.0% | |
| TCTGTCTCTTTCGAGGAGCA+TGG | + | chr4.4:10017253-10017272 | None:intergenic | 50.0% | |
| TGTCATTGGGCTGTTGACAC+AGG | - | chr4.4:10018820-10018839 | MS.gene28118:intron | 50.0% | |
| TTCGGCGGTGATGTATACAG+TGG | + | chr4.4:10018780-10018799 | None:intergenic | 50.0% | |
| ! | AGAGACAGAGCGTTAGGATC+AGG | - | chr4.4:10017264-10017283 | MS.gene28118:intron | 50.0% |
| ! | ATGGCGCATAGCTGCCTTTT+CGG | + | chr4.4:10017234-10017253 | None:intergenic | 50.0% |
| ! | CAGGAAGAGTGATGATGTGG+AGG | - | chr4.4:10017283-10017302 | MS.gene28118:intron | 50.0% |
| ! | CTCGAAAGAGACAGAGCGTT+AGG | - | chr4.4:10017258-10017277 | MS.gene28118:intron | 50.0% |
| ! | GGAAGAGTGATGATGTGGAG+GGG | - | chr4.4:10017285-10017304 | MS.gene28118:intron | 50.0% |
| ! | GGGCTGTTGACACAGGATTT+TGG | - | chr4.4:10018827-10018846 | MS.gene28118:intron | 50.0% |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr4.4:10020576-10020595 | MS.gene28118:intron | 50.0% |
| !! | CACCAAGCCCAAAGAGTGTT+GGG | + | chr4.4:10020479-10020498 | None:intergenic | 50.0% |
| !! | CAGGTTGTCAATAGCGGACA+TGG | - | chr4.4:10020276-10020295 | MS.gene28118:intron | 50.0% |
| !! | CTCCTCTAGAGTGGGAATAG+TGG | + | chr4.4:10018747-10018766 | None:intergenic | 50.0% |
| !! | GTAGTGGACCCCACACAATT+AGG | - | chr4.4:10017334-10017353 | MS.gene28118:CDS | 50.0% |
| !! | TATTGCAGCGGTTTGGCTTG+TGG | - | chr4.4:10020305-10020324 | MS.gene28118:intron | 50.0% |
| ACAAGCGCGTCAGGTTCCAA+AGG | - | chr4.4:10022089-10022108 | MS.gene28118:intron | 55.0% | |
| ACAGAGTGCACGAGCCGAAA+AGG | - | chr4.4:10017217-10017236 | MS.gene28118:CDS | 55.0% | |
| ATTGTGTGGGGTCCACTACC+TGG | + | chr4.4:10017333-10017352 | None:intergenic | 55.0% | |
| CAACTGCCATGCAGCATAGG+AGG | + | chr4.4:10022324-10022343 | None:intergenic | 55.0% | |
| CCTCACGCCCAACACTCTTT+GGG | - | chr4.4:10020469-10020488 | MS.gene28118:intron | 55.0% | |
| CGGACGCAAGCTTTCAAGAC+TGG | - | chr4.4:10018874-10018893 | MS.gene28118:intron | 55.0% | |
| CTGCATCAACGCAGTCAAGG+CGG | + | chr4.4:10018112-10018131 | None:intergenic | 55.0% | |
| GCGCAGCGCAACTTCACAAA+AGG | + | chr4.4:10020168-10020187 | None:intergenic | 55.0% | |
| TTGCGAGAGAGAGAGATGGG+CGG | - | chr4.4:10018220-10018239 | MS.gene28118:intron | 55.0% | |
| TTGGCTATCACAAGCGCGTC+AGG | - | chr4.4:10022080-10022099 | MS.gene28118:intron | 55.0% | |
| ! | CTTGCGTCCGGTGCACTTTT+TGG | + | chr4.4:10018864-10018883 | None:intergenic | 55.0% |
| ! | GCACCAAGCCCAAAGAGTGT+TGG | + | chr4.4:10020480-10020499 | None:intergenic | 55.0% |
| ! | GGCTGTTGTGGATTGCTCGT+GGG | - | chr4.4:10020125-10020144 | MS.gene28118:intron | 55.0% |
| ! | TGCAGTGCCATGGCTTGTAG+CGG | - | chr4.4:10020776-10020795 | MS.gene28118:intron | 55.0% |
| ! | TGGCTGTTGTGGATTGCTCG+TGG | - | chr4.4:10020124-10020143 | MS.gene28118:intron | 55.0% |
| ! | TTTGGGGCCTAACTCAGGTG+AGG | - | chr4.4:10020369-10020388 | MS.gene28118:intron | 55.0% |
| !! | AAAGAGTGTTGGGCGTGAGG+GGG | + | chr4.4:10020469-10020488 | None:intergenic | 55.0% |
| !! | CAAAGAGTGTTGGGCGTGAG+GGG | + | chr4.4:10020470-10020489 | None:intergenic | 55.0% |
| !! | CCAAAGAGTGTTGGGCGTGA+GGG | + | chr4.4:10020471-10020490 | None:intergenic | 55.0% |
| !! | GAGGAAGCCTTTTGAGGGCA+AGG | - | chr4.4:10019391-10019410 | MS.gene28118:intron | 55.0% |
| CCCTCACGCCCAACACTCTT+TGG | - | chr4.4:10020468-10020487 | MS.gene28118:intron | 60.0% | |
| CGCCCAACACTCTTTGGGCT+TGG | - | chr4.4:10020474-10020493 | MS.gene28118:intron | 60.0% | |
| GGGTTTGCCGCTACAAGCCA+TGG | + | chr4.4:10020786-10020805 | None:intergenic | 60.0% | |
| ! | GTCGACTGGCCGCTACTATC+TGG | - | chr4.4:10020327-10020346 | MS.gene28118:intron | 60.0% |
| !! | AAGAGTGTTGGGCGTGAGGG+GGG | + | chr4.4:10020468-10020487 | None:intergenic | 60.0% |
| !! | CCCAAAGAGTGTTGGGCGTG+AGG | + | chr4.4:10020472-10020491 | None:intergenic | 60.0% |
| !! | CGGTTTGGCTTGTGGTCGAC+TGG | - | chr4.4:10020313-10020332 | MS.gene28118:intron | 60.0% |
| ACTACCTGGACGCACCCACC+TGG | + | chr4.4:10017319-10017338 | None:intergenic | 65.0% | |
| AGGTGGGTGCGTCCAGGTAG+TGG | - | chr4.4:10017318-10017337 | MS.gene28118:intron | 65.0% | |
| CAGCACATTGCGGGCAACGC+TGG | + | chr4.4:10021009-10021028 | None:intergenic | 65.0% | |
| CTACCTGGACGCACCCACCT+GGG | + | chr4.4:10017318-10017337 | None:intergenic | 65.0% | |
| GAGGGGACGTCATCCCAGGT+GGG | - | chr4.4:10017302-10017321 | MS.gene28118:intron | 65.0% | |
| TGTGGAGGGGACGTCATCCC+AGG | - | chr4.4:10017298-10017317 | MS.gene28118:intron | 65.0% | |
| ! | GGGCGTGAGGGGGGTGTATT+GGG | + | chr4.4:10020459-10020478 | None:intergenic | 65.0% |
| ! | TGGGCGTGAGGGGGGTGTAT+TGG | + | chr4.4:10020460-10020479 | None:intergenic | 65.0% |
| CATCCCAGGTGGGTGCGTCC+AGG | - | chr4.4:10017312-10017331 | MS.gene28118:intron | 70.0% | |
| GGAGGGGACGTCATCCCAGG+TGG | - | chr4.4:10017301-10017320 | MS.gene28118:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 10017212 | 10022571 | 10017212 | ID=MS.gene28118 |
| chr4.4 | mRNA | 10017212 | 10022571 | 10017212 | ID=MS.gene28118.t1;Parent=MS.gene28118 |
| chr4.4 | exon | 10022460 | 10022571 | 10022460 | ID=MS.gene28118.t1.exon1;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10022460 | 10022571 | 10022460 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10021286 | 10021353 | 10021286 | ID=MS.gene28118.t1.exon2;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10021286 | 10021353 | 10021286 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10020876 | 10020941 | 10020876 | ID=MS.gene28118.t1.exon3;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10020876 | 10020941 | 10020876 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10019951 | 10019991 | 10019951 | ID=MS.gene28118.t1.exon4;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10019951 | 10019991 | 10019951 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10019582 | 10019718 | 10019582 | ID=MS.gene28118.t1.exon5;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10019582 | 10019718 | 10019582 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10018912 | 10019002 | 10018912 | ID=MS.gene28118.t1.exon6;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10018912 | 10019002 | 10018912 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10018499 | 10018570 | 10018499 | ID=MS.gene28118.t1.exon7;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10018499 | 10018570 | 10018499 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10017654 | 10017766 | 10017654 | ID=MS.gene28118.t1.exon8;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10017654 | 10017766 | 10017654 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10017329 | 10017442 | 10017329 | ID=MS.gene28118.t1.exon9;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10017329 | 10017442 | 10017329 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| chr4.4 | exon | 10017212 | 10017240 | 10017212 | ID=MS.gene28118.t1.exon10;Parent=MS.gene28118.t1 |
| chr4.4 | CDS | 10017212 | 10017240 | 10017212 | ID=cds.MS.gene28118.t1;Parent=MS.gene28118.t1 |
| Gene Sequence |
| Protein sequence |
