AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene057060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene057060.t1 MTR_5g094850 81.455 275 37 5 1 269 238 504 3.64e-138 399
MS.gene057060.t1 MTR_5g094850 73.723 274 37 5 1 269 238 481 2.35e-114 337
MS.gene057060.t1 MTR_5g094920 49.084 273 85 5 1 269 315 537 5.35e-55 186
MS.gene057060.t1 MTR_5g094960 48.305 236 80 4 1 236 239 432 6.02e-51 173
MS.gene057060.t1 MTR_5g094990 48.750 240 80 4 1 236 233 433 4.55e-42 150
MS.gene057060.t1 MTR_5g094950 47.500 240 90 3 1 234 307 516 1.52e-41 150
MS.gene057060.t1 MTR_5g095390 43.796 274 55 11 1 269 190 369 5.95e-41 145
MS.gene057060.t1 MTR_5g094910 39.869 153 46 3 84 236 243 349 1.09e-22 96.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 59 sgRNAs with CRISPR-Local

Find 130 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGATCATCTTGATTTAT+TGG 0.203669 5.3:+77057673 None:intergenic
TCGGGCTTAGATGCCTCTAT+TGG 0.322418 5.3:-77057859 MS.gene057060:CDS
CATATAAAGAAAGCTAGTTT+TGG 0.325419 5.3:-77056049 MS.gene057060:CDS
AGGAAAACGGTTGAGATTAC+AGG 0.365163 5.3:-77056770 MS.gene057060:CDS
AGTAGAAGTGGAGGTGGAAG+TGG 0.367803 5.3:+77055904 None:intergenic
GAGGAATGAAAGCAGCAAAT+TGG 0.390389 5.3:-77057986 MS.gene057060:CDS
CAAGATGATCATTACACTCT+TGG 0.393009 5.3:-77057664 MS.gene057060:CDS
CTCATTGTTGCCACCAATAG+AGG 0.396366 5.3:+77057846 None:intergenic
AGCCGGTGGAAGAGTGAAAC+TGG 0.434903 5.3:-77056143 MS.gene057060:CDS
TCGTCCTCGTTATCTTCAAA+AGG 0.448253 5.3:+77057751 None:intergenic
CGCTAGAAAGCCCAGGAAAA+CGG 0.451250 5.3:-77056783 MS.gene057060:CDS
TCATCTTGATTTATTGGTAA+AGG 0.453360 5.3:+77057679 None:intergenic
GCCAGTGCTGCTGATGAACT+TGG 0.454339 5.3:+77056004 None:intergenic
GCCAAGTTCATCAGCAGCAC+TGG 0.459749 5.3:-77056005 MS.gene057060:CDS
TTCCAGTTTCACTCTTCCAC+CGG 0.474751 5.3:+77056141 None:intergenic
GATGCTCAAGGTTCATCATC+AGG 0.480745 5.3:-77057601 MS.gene057060:intron
CATCGTCGTCATTGTCATCA+AGG 0.484008 5.3:+77056098 None:intergenic
TTTGACCGTGTCAACTGCAT+TGG 0.491729 5.3:+77055958 None:intergenic
GGCTTAGATGCCTCTATTGG+TGG 0.497178 5.3:-77057856 MS.gene057060:CDS
AGAAGTGGAGGTGGAAGTGG+AGG 0.504345 5.3:+77055907 None:intergenic
TCCACTTCTACTTCCTCCGA+TGG 0.506545 5.3:-77055893 MS.gene057060:CDS
GTCACCGAGCAAAGGGATCA+AGG 0.524366 5.3:-77057623 MS.gene057060:CDS
CATGTCTCGATAATCTTACA+AGG 0.529060 5.3:-77055868 MS.gene057060:CDS
GCATCCTTGATCCCTTTGCT+CGG 0.529843 5.3:+77057619 None:intergenic
GTACTCAGTCACCGAGCAAA+GGG 0.531835 5.3:-77057630 MS.gene057060:CDS
GGAGGAAGTAGAAGTGGAGG+TGG 0.539101 5.3:+77055898 None:intergenic
TCTATTGGTGGCAACAATGA+GGG 0.540187 5.3:-77057844 MS.gene057060:CDS
TCCTCGCTCTCTTCAGAACT+AGG 0.540500 5.3:+77057796 None:intergenic
TCTTCAGAACTAGGAACCAC+TGG 0.540888 5.3:+77057805 None:intergenic
CTCTATTGGTGGCAACAATG+AGG 0.543509 5.3:-77057845 MS.gene057060:CDS
TTTCTGCAGGTGAAGAGTGT+TGG 0.551438 5.3:-77056814 MS.gene057060:intron
GATAACGAGGACGAGAATGC+TGG 0.561580 5.3:-77057742 MS.gene057060:CDS
GGAGCCTTCTGCTGATCCAG+TGG 0.561757 5.3:-77057821 MS.gene057060:CDS
CAAAGCCTCAAGTAATGTCT+CGG 0.571102 5.3:+77057945 None:intergenic
GTTGAGATTACAGGGTCTTG+TGG 0.573376 5.3:-77056761 MS.gene057060:CDS
GATGATCAATCTATGTCTCA+AGG 0.574541 5.3:-77056076 MS.gene057060:CDS
AGTACTCAGTCACCGAGCAA+AGG 0.588934 5.3:-77057631 MS.gene057060:CDS
ACCATCGGAGGAAGTAGAAG+TGG 0.600712 5.3:+77055892 None:intergenic
GAGATTACAGGGTCTTGTGG+AGG 0.601325 5.3:-77056758 MS.gene057060:intron
TGGCAACGATGAGTGAGTTG+AGG 0.602280 5.3:-77058005 None:intergenic
CGAGGAAGAGCGTGTTCATG+TGG 0.602379 5.3:-77057779 MS.gene057060:CDS
CTATTGGTGGCAACAATGAG+GGG 0.607900 5.3:-77057843 MS.gene057060:CDS
CATTACTTGAGGCTTTGAAG+AGG 0.609257 5.3:-77057939 MS.gene057060:CDS
CATAAATGACATTGTTGACG+AGG 0.611921 5.3:-77057707 MS.gene057060:CDS
TGGTATACGCTAGAAAGCCC+AGG 0.612521 5.3:-77056790 MS.gene057060:CDS
TGAAAGAGTAACAACGTTGG+AGG 0.614401 5.3:-77057899 MS.gene057060:CDS
ATTTGCCAATGCAGTTGACA+CGG 0.617434 5.3:-77055963 MS.gene057060:CDS
TCCTAGTTCTGAAGAGAGCG+AGG 0.618367 5.3:-77057797 MS.gene057060:CDS
TGAAAGCAGCAAATTGGCAG+AGG 0.619230 5.3:-77057980 MS.gene057060:CDS
GGAAAACGGTTGAGATTACA+GGG 0.627772 5.3:-77056769 MS.gene057060:CDS
AAAGGGATCAAGGATGCTCA+AGG 0.628139 5.3:-77057613 MS.gene057060:CDS
CGAAGCCGAGACATTACTTG+AGG 0.631250 5.3:-77057950 MS.gene057060:CDS
TGCAGGTGAAGAGTGTTGGA+TGG 0.633165 5.3:-77056810 MS.gene057060:intron
ATTATCGAGACATGAACCAT+CGG 0.637556 5.3:+77055877 None:intergenic
GGAACCACTGGATCAGCAGA+AGG 0.640019 5.3:+77057817 None:intergenic
ATCGGAGGAAGTAGAAGTGG+AGG 0.645940 5.3:+77055895 None:intergenic
TATTGGTGGCAACAATGAGG+GGG 0.686512 5.3:-77057842 MS.gene057060:CDS
ATCGAGACATGAACCATCGG+AGG 0.699092 5.3:+77055880 None:intergenic
GCGTGAAAGAGTAACAACGT+TGG 0.738449 5.3:-77057902 MS.gene057060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAAAACTTGAAAAATA+AGG + chr5.3:77057614-77057633 None:intergenic 15.0%
!! AATAATTCATAGTTATTAAG+GGG - chr5.3:77057137-77057156 MS.gene057060:intron 15.0%
!! GAATAATTCATAGTTATTAA+GGG - chr5.3:77057136-77057155 MS.gene057060:intron 15.0%
!! AAAACTTGAAAAATAAGGTA+CGG + chr5.3:77057609-77057628 None:intergenic 20.0%
!! AAATATAGTGAAAATGTGTT+TGG - chr5.3:77057214-77057233 MS.gene057060:intron 20.0%
!! AATGAAAAACAAACAAAATC+AGG - chr5.3:77057408-77057427 MS.gene057060:intron 20.0%
!! AATTAAACTTCTATCAAAAG+AGG + chr5.3:77056601-77056620 None:intergenic 20.0%
!! ACCAGGATATTATATTATTA+TGG - chr5.3:77056502-77056521 MS.gene057060:intron 20.0%
!! CCAGGATATTATATTATTAT+GGG - chr5.3:77056503-77056522 MS.gene057060:intron 20.0%
!! GGAATAATTCATAGTTATTA+AGG - chr5.3:77057135-77057154 MS.gene057060:intron 20.0%
!! TAATGATCATCTTGATTTAT+TGG + chr5.3:77056168-77056187 None:intergenic 20.0%
!! TTCAAAGTACAAACAATAAA+TGG + chr5.3:77056854-77056873 None:intergenic 20.0%
!!! AAACACATTTTGTTTTTCTT+AGG - chr5.3:77057432-77057451 MS.gene057060:intron 20.0%
! AATGATTATTCACTTGTTCA+TGG - chr5.3:77057186-77057205 MS.gene057060:intron 25.0%
! CCCATAATAATATAATATCC+TGG + chr5.3:77056506-77056525 None:intergenic 25.0%
! TATCAGATAATATATACAGC+AGG + chr5.3:77057477-77057496 None:intergenic 25.0%
! TCAGAAATGCATATCTATAT+AGG + chr5.3:77056293-77056312 None:intergenic 25.0%
! TCATCTTGATTTATTGGTAA+AGG + chr5.3:77056162-77056181 None:intergenic 25.0%
! TTGAATTCAATATGTGTGAT+TGG - chr5.3:77056330-77056349 MS.gene057060:intron 25.0%
!! AAATTATGATGACTAGCTAA+TGG + chr5.3:77056442-77056461 None:intergenic 25.0%
!! TGCTTAAACATATCTCTTTT+TGG - chr5.3:77057669-77057688 MS.gene057060:CDS 25.0%
!!! CATATAAAGAAAGCTAGTTT+TGG - chr5.3:77057789-77057808 MS.gene057060:CDS 25.0%
!!! TTTTTAGAACATTTTTCTGC+AGG - chr5.3:77057011-77057030 MS.gene057060:intron 25.0%
AATAAAGATGAACCTTAGAG+AGG + chr5.3:77056647-77056666 None:intergenic 30.0%
AATTATCCCATATCAAGTGT+TGG + chr5.3:77056938-77056957 None:intergenic 30.0%
AATTCATAGTTATTAAGGGG+AGG - chr5.3:77057140-77057159 MS.gene057060:intron 30.0%
ACCAAATTAACCTAATATCC+CGG + chr5.3:77056578-77056597 None:intergenic 30.0%
ATATACTCCAACACTTGATA+TGG - chr5.3:77056928-77056947 MS.gene057060:intron 30.0%
TAGATAAACTCAATTAGCAC+CGG - chr5.3:77056556-77056575 MS.gene057060:intron 30.0%
TATACTCCAACACTTGATAT+GGG - chr5.3:77056929-77056948 MS.gene057060:intron 30.0%
TGTGTGATTGGATAAATGTT+TGG - chr5.3:77056342-77056361 MS.gene057060:intron 30.0%
TTATATTATTATGGGCTCTC+TGG - chr5.3:77056511-77056530 MS.gene057060:intron 30.0%
! AATGCTACTTACATTTCCTT+AGG + chr5.3:77056725-77056744 None:intergenic 30.0%
!! TGTTCTAAAAAACTGTCTGA+AGG + chr5.3:77057002-77057021 None:intergenic 30.0%
!!! CAAGTGGATAAACTGTTTTT+TGG - chr5.3:77057259-77057278 MS.gene057060:intron 30.0%
AAGGTTCATCATCAGGTATA+TGG - chr5.3:77056244-77056263 MS.gene057060:intron 35.0%
ACCGGGATATTAGGTTAATT+TGG - chr5.3:77056574-77056593 MS.gene057060:intron 35.0%
AGATAAACTCAATTAGCACC+GGG - chr5.3:77056557-77056576 MS.gene057060:intron 35.0%
ATTATCGAGACATGAACCAT+CGG + chr5.3:77057964-77057983 None:intergenic 35.0%
CAAGATGATCATTACACTCT+TGG - chr5.3:77056174-77056193 MS.gene057060:intron 35.0%
CATAAATGACATTGTTGACG+AGG - chr5.3:77056131-77056150 MS.gene057060:CDS 35.0%
CATGTCTCGATAATCTTACA+AGG - chr5.3:77057970-77057989 MS.gene057060:CDS 35.0%
GATGATCAATCTATGTCTCA+AGG - chr5.3:77057762-77057781 MS.gene057060:CDS 35.0%
GGAGGTTTATTAGAGAATAG+AGG - chr5.3:77057158-77057177 MS.gene057060:intron 35.0%
TCAATTACTTGAAGATCCAG+TGG - chr5.3:77057523-77057542 MS.gene057060:intron 35.0%
TGTGTTTGGATTATCTGTTG+AGG - chr5.3:77057228-77057247 MS.gene057060:intron 35.0%
TTGGATTATCTGTTGAGGTT+TGG - chr5.3:77057233-77057252 MS.gene057060:intron 35.0%
! GAAGATCTCATTCTTTTGTC+GGG - chr5.3:77055961-77055980 MS.gene057060:CDS 35.0%
! GGAAGATCTCATTCTTTTGT+CGG - chr5.3:77055960-77055979 MS.gene057060:CDS 35.0%
!! GAAATGTAAGTAGCATTGAC+AGG - chr5.3:77056728-77056747 MS.gene057060:intron 35.0%
!! TGATCCTTTTGAAGATAACG+AGG - chr5.3:77056083-77056102 MS.gene057060:CDS 35.0%
AAGATGAACCTTAGAGAGGA+AGG + chr5.3:77056643-77056662 None:intergenic 40.0%
AGGAAAACGGTTGAGATTAC+AGG - chr5.3:77057068-77057087 MS.gene057060:intron 40.0%
ATTTGCCAATGCAGTTGACA+CGG - chr5.3:77057875-77057894 MS.gene057060:CDS 40.0%
CAAAGCCTCAAGTAATGTCT+CGG + chr5.3:77055896-77055915 None:intergenic 40.0%
CAATCACTAGTTGAGCATAC+TGG + chr5.3:77056369-77056388 None:intergenic 40.0%
CAGAAAGAAAGCTTCCTCAA+GGG + chr5.3:77057379-77057398 None:intergenic 40.0%
GAGGAATGAAAGCAGCAAAT+TGG - chr5.3:77055852-77055871 MS.gene057060:CDS 40.0%
GGAAAACGGTTGAGATTACA+GGG - chr5.3:77057069-77057088 MS.gene057060:intron 40.0%
GTACATACTCAATTAGCACC+AGG - chr5.3:77056485-77056504 MS.gene057060:intron 40.0%
GTTATTCAGTAGCATGCAGA+AGG - chr5.3:77057106-77057125 MS.gene057060:intron 40.0%
TCAGAAAGAAAGCTTCCTCA+AGG + chr5.3:77057380-77057399 None:intergenic 40.0%
TCGTCCTCGTTATCTTCAAA+AGG + chr5.3:77056090-77056109 None:intergenic 40.0%
TGAAAGAGTAACAACGTTGG+AGG - chr5.3:77055939-77055958 MS.gene057060:CDS 40.0%
! AGCTGGATCTGATTTTCCTA+AGG - chr5.3:77056706-77056725 MS.gene057060:intron 40.0%
! ATATCTCTTTTTGGACCAGC+CGG - chr5.3:77057678-77057697 MS.gene057060:CDS 40.0%
! GGATTTTCCTTGAAATGCTG+AGG - chr5.3:77057548-77057567 MS.gene057060:intron 40.0%
! GTAATCTCAACCGTTTTCCT+GGG + chr5.3:77057068-77057087 None:intergenic 40.0%
! TCAATTAGCACCGGGATATT+AGG - chr5.3:77056565-77056584 MS.gene057060:intron 40.0%
! TCTATTGGTGGCAACAATGA+GGG - chr5.3:77055994-77056013 MS.gene057060:CDS 40.0%
! TGTAATCTCAACCGTTTTCC+TGG + chr5.3:77057069-77057088 None:intergenic 40.0%
!! CATTACTTGAGGCTTTGAAG+AGG - chr5.3:77055899-77055918 MS.gene057060:CDS 40.0%
AAAGGGATCAAGGATGCTCA+AGG - chr5.3:77056225-77056244 MS.gene057060:intron 45.0%
AGCTTCTTCCTTCCTCTCTA+AGG - chr5.3:77056632-77056651 MS.gene057060:intron 45.0%
CATCGTCGTCATTGTCATCA+AGG + chr5.3:77057743-77057762 None:intergenic 45.0%
CTAGTAGCCTCAGCATTTCA+AGG + chr5.3:77057558-77057577 None:intergenic 45.0%
CTCATTGTTGCCACCAATAG+AGG + chr5.3:77055995-77056014 None:intergenic 45.0%
GATGCTCAAGGTTCATCATC+AGG - chr5.3:77056237-77056256 MS.gene057060:intron 45.0%
GATTTCTTCCTCATCCCTTG+AGG - chr5.3:77057362-77057381 MS.gene057060:intron 45.0%
GCGTGAAAGAGTAACAACGT+TGG - chr5.3:77055936-77055955 MS.gene057060:CDS 45.0%
GTTGAGATTACAGGGTCTTG+TGG - chr5.3:77057077-77057096 MS.gene057060:intron 45.0%
TCTTCAGAACTAGGAACCAC+TGG + chr5.3:77056036-77056055 None:intergenic 45.0%
TGAAAGCAGCAAATTGGCAG+AGG - chr5.3:77055858-77055877 MS.gene057060:CDS 45.0%
TTACTTGAAGATCCAGTGGC+TGG - chr5.3:77057527-77057546 MS.gene057060:intron 45.0%
TTCAAGGAAAATCCAGCCAC+TGG + chr5.3:77057542-77057561 None:intergenic 45.0%
TTCCAGTTTCACTCTTCCAC+CGG + chr5.3:77057700-77057719 None:intergenic 45.0%
TTTGACCGTGTCAACTGCAT+TGG + chr5.3:77057883-77057902 None:intergenic 45.0%
! CTATTGGTGGCAACAATGAG+GGG - chr5.3:77055995-77056014 MS.gene057060:CDS 45.0%
! CTCTATTGGTGGCAACAATG+AGG - chr5.3:77055993-77056012 MS.gene057060:CDS 45.0%
! TATTGGTGGCAACAATGAGG+GGG - chr5.3:77055996-77056015 MS.gene057060:CDS 45.0%
! TGTTGAGGTTTGGTAGCAAG+TGG - chr5.3:77057243-77057262 MS.gene057060:intron 45.0%
! TTTCTGCAGGTGAAGAGTGT+TGG - chr5.3:77057024-77057043 MS.gene057060:intron 45.0%
!! AGTAGCATTGACAGGAACTG+TGG - chr5.3:77056736-77056755 MS.gene057060:intron 45.0%
AAGAGAGCCAAGAGCTAGCT+TGG + chr5.3:77056684-77056703 None:intergenic 50.0%
ACCATCGGAGGAAGTAGAAG+TGG + chr5.3:77057949-77057968 None:intergenic 50.0%
AGTACTCAGTCACCGAGCAA+AGG - chr5.3:77056207-77056226 MS.gene057060:intron 50.0%
AGTAGAAGTGGAGGTGGAAG+TGG + chr5.3:77057937-77057956 None:intergenic 50.0%
ATCGAGACATGAACCATCGG+AGG + chr5.3:77057961-77057980 None:intergenic 50.0%
ATCGGAGGAAGTAGAAGTGG+AGG + chr5.3:77057946-77057965 None:intergenic 50.0%
CGAAGCCGAGACATTACTTG+AGG - chr5.3:77055888-77055907 MS.gene057060:CDS 50.0%
CGCTAGAAAGCCCAGGAAAA+CGG - chr5.3:77057055-77057074 MS.gene057060:intron 50.0%
GAAAGCTTCCTCAAGGGATG+AGG + chr5.3:77057373-77057392 None:intergenic 50.0%
GATAACGAGGACGAGAATGC+TGG - chr5.3:77056096-77056115 MS.gene057060:CDS 50.0%
GCATCCTTGATCCCTTTGCT+CGG + chr5.3:77056222-77056241 None:intergenic 50.0%
GGCTTAGATGCCTCTATTGG+TGG - chr5.3:77055982-77056001 MS.gene057060:CDS 50.0%
GTACTCAGTCACCGAGCAAA+GGG - chr5.3:77056208-77056227 MS.gene057060:intron 50.0%
TCCACTTCTACTTCCTCCGA+TGG - chr5.3:77057945-77057964 MS.gene057060:CDS 50.0%
TCCTCGCTCTCTTCAGAACT+AGG + chr5.3:77056045-77056064 None:intergenic 50.0%
TCGGGCTTAGATGCCTCTAT+TGG - chr5.3:77055979-77055998 MS.gene057060:CDS 50.0%
TGGTATACGCTAGAAAGCCC+AGG - chr5.3:77057048-77057067 MS.gene057060:intron 50.0%
! AGAGAGCCAAGAGCTAGCTT+GGG + chr5.3:77056683-77056702 None:intergenic 50.0%
! CTAGCTTGGGCTAGGTAACA+TGG + chr5.3:77056670-77056689 None:intergenic 50.0%
! GAGATTACAGGGTCTTGTGG+AGG - chr5.3:77057080-77057099 MS.gene057060:intron 50.0%
! GTAGCATGCAGAAGGTGTAG+TGG - chr5.3:77057114-77057133 MS.gene057060:intron 50.0%
!! TCCTAGTTCTGAAGAGAGCG+AGG - chr5.3:77056041-77056060 MS.gene057060:CDS 50.0%
!! TGCAGGTGAAGAGTGTTGGA+TGG - chr5.3:77057028-77057047 MS.gene057060:intron 50.0%
AGAAGTGGAGGTGGAAGTGG+AGG + chr5.3:77057934-77057953 None:intergenic 55.0%
AGCCGGTGGAAGAGTGAAAC+TGG - chr5.3:77057695-77057714 MS.gene057060:CDS 55.0%
AGTTTCACTCTTCCACCGGC+TGG + chr5.3:77057696-77057715 None:intergenic 55.0%
GCCAAGTTCATCAGCAGCAC+TGG - chr5.3:77057833-77057852 MS.gene057060:CDS 55.0%
GGAACCACTGGATCAGCAGA+AGG + chr5.3:77056024-77056043 None:intergenic 55.0%
GGAGGAAGTAGAAGTGGAGG+TGG + chr5.3:77057943-77057962 None:intergenic 55.0%
GTCACCGAGCAAAGGGATCA+AGG - chr5.3:77056215-77056234 MS.gene057060:intron 55.0%
! ACCTAGCCCAAGCTAGCTCT+TGG - chr5.3:77056674-77056693 MS.gene057060:intron 55.0%
! CGAGGAAGAGCGTGTTCATG+TGG - chr5.3:77056059-77056078 MS.gene057060:CDS 55.0%
! GCCAGTGCTGCTGATGAACT+TGG + chr5.3:77057837-77057856 None:intergenic 55.0%
! GCTCTTGGCTCTCTTGTAGC+TGG - chr5.3:77056689-77056708 MS.gene057060:intron 55.0%
! TCTCTTTTTGGACCAGCCGG+TGG - chr5.3:77057681-77057700 MS.gene057060:CDS 55.0%
GGAGCCTTCTGCTGATCCAG+TGG - chr5.3:77056017-77056036 MS.gene057060:CDS 60.0%
! GCCAAGAGCTAGCTTGGGCT+AGG + chr5.3:77056678-77056697 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 77055841 77058019 77055841 ID=MS.gene057060
chr5.3 mRNA 77055841 77058019 77055841 ID=MS.gene057060.t1;Parent=MS.gene057060
chr5.3 exon 77057602 77058019 77057602 ID=MS.gene057060.t1.exon1;Parent=MS.gene057060.t1
chr5.3 CDS 77057602 77058019 77057602 ID=cds.MS.gene057060.t1;Parent=MS.gene057060.t1
chr5.3 exon 77056759 77056827 77056759 ID=MS.gene057060.t1.exon2;Parent=MS.gene057060.t1
chr5.3 CDS 77056759 77056827 77056759 ID=cds.MS.gene057060.t1;Parent=MS.gene057060.t1
chr5.3 exon 77055841 77056163 77055841 ID=MS.gene057060.t1.exon3;Parent=MS.gene057060.t1
chr5.3 CDS 77055841 77056163 77055841 ID=cds.MS.gene057060.t1;Parent=MS.gene057060.t1
Gene Sequence

>MS.gene057060

ATGAGTGAGTTGAGGAATGAAAGCAGCAAATTGGCAGAGGAGAAGCGCGAAGCCGAGACATTACTTGAGGCTTTGAAGAGGAAGTTTATTCGACTGCGTGAAAGAGTAACAACGTTGGAGGAAGATCTCATTCTTTTGTCGGGCTTAGATGCCTCTATTGGTGGCAACAATGAGGGGGAGCCTTCTGCTGATCCAGTGGTTCCTAGTTCTGAAGAGAGCGAGGAAGAGCGTGTTCATGTGGTTGATCCTTTTGAAGATAACGAGGACGAGAATGCTGGTGAAGATGAGTTCATAAATGACATTGTTGACGAGGCTGCTCCTTTACCAATAAATCAAGATGATCATTACACTCTTGGAGTTGCTGCTAGTACTCAGTCACCGAGCAAAGGGATCAAGGATGCTCAAGGTTCATCATCAGGTATATGGAAATTATGCATGCATCTCTTATTCCTATATAGATATGCATTTCTGAATATTATTTTATAAGTATTGAATTCAATATGTGTGATTGGATAAATGTTTGGTCCAGTATGCTCAACTAGTGATTGAGACTTTGTCAAAAACAAAACTAGTGATTGAAACAGATCACATTGAAATACCATTAGCTAGTCATCATAATTTGCAATTACAGTATGACATAACTAGTACATACTCAATTAGCACCAGGATATTATATTATTATGGGCTCTCTGGATATTATATAACTTAGATAACTTAGATAAACTCAATTAGCACCGGGATATTAGGTTAATTTGGTCCTCTTTTGATAGAAGTTTAATTGTGATTTTTGAAGCTTCTTCCTTCCTCTCTAAGGTTCATCTTTATTCCATGTTACCTAGCCCAAGCTAGCTCTTGGCTCTCTTGTAGCTGGATCTGATTTTCCTAAGGAAATGTAAGTAGCATTGACAGGAACTGTGGAAGCTCAAACAAATCTTACTTAGAACTTAGAATGAGATGTGTTATATTATAGTAGCTATTTTCTGTTTCTGTTCTTTTTTTATCTTTCGAAACCATTTATTGTTTGTACTTTGAAGCTTGTTTAGAATACAATAGAATGTTCTTCTGTTTTGCACTTTCTCTTGTAGAGATATACTCCAACACTTGATATGGGATAATTGAGTGATTCTAAACATGCATTATTTCTTCATTTCACATGTTCCTTCAGACAGTTTTTTAGAACATTTTTCTGCAGGTGAAGAGTGTTGGATGGTATACGCTAGAAAGCCCAGGAAAACGGTTGAGATTACAGGGTCTTGTGGAGGTTAGTTATTCAGTAGCATGCAGAAGGTGTAGTGGAATAATTCATAGTTATTAAGGGGAGGTTTATTAGAGAATAGAGGATGTGAATGATTATTCACTTGTTCATGGAAAAGAAATATAGTGAAAATGTGTTTGGATTATCTGTTGAGGTTTGGTAGCAAGTGGATAAACTGTTTTTTGGATTATCTGTTGCGTTTTTCTTTTGATTTCTTCTCTTTCATATGTTTGATCTCTTCAAAAACTGTCAATCATCTTTTATGTGATTTCTTCCTCATCCCTTGAGGAAGCTTTCTTTCTGAAAAACAAAAATGAAAAACAAACAAAATCAGGTAAACACATTTTGTTTTTCTTAGGTAAACATGATTACAGAATGCCTGCTGTATATATTATCTGATATTTTGAATTTGATGAATCATATATAGTCAATTACTTGAAGATCCAGTGGCTGGATTTTCCTTGAAATGCTGAGGCTACTAGAAATGTTTTCATTGAAATAAAGAATCTACCGTACCTTATTTTTCAAGTTTTTGTTTGAGTATTATCATGTTTAGCAAACGTTAGTTATGTATGCTTAAACATATCTCTTTTTGGACCAGCCGGTGGAAGAGTGAAACTGGAAAATGAGATTGAGATCATAAACCTTGATGACAATGACGACGATGATGATCAATCTATGTCTCAAGGAGTACATATAAAGAAAGCTAGTTTTGGAATCACTGTGAAGATTGAAGAGCCAAGTTCATCAGCAGCACTGGCAACACAACAAAAAAGCAAATTTGCCAATGCAGTTGACACGGTCAAAAGAAAATTTTCTTTCAGCGACAGTGAAACCTCCACTTCCACCTCCACTTCTACTTCCTCCGATGGTTCATGTCTCGATAATCTTACAAGGTCTGATGCAAAAAAGAAAAAGATGTAG

Protein sequence

>MS.gene057060.t1

MSELRNESSKLAEEKREAETLLEALKRKFIRLRERVTTLEEDLILLSGLDASIGGNNEGEPSADPVVPSSEESEEERVHVVDPFEDNEDENAGEDEFINDIVDEAAPLPINQDDHYTLGVAASTQSPSKGIKDAQGSSSGEECWMVYARKPRKTVEITGSCGAGGRVKLENEIEIINLDDNDDDDDQSMSQGVHIKKASFGITVKIEEPSSSAALATQQKSKFANAVDTVKRKFSFSDSETSTSTSTSTSSDGSCLDNLTRSDAKKKKM