Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28242.t1 | XP_013459112.1 | 97.1 | 35 | 1 | 0 | 1 | 35 | 14 | 48 | 2.30E-07 | 66.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28242.t1 | A0A072V4P7 | 97.1 | 35 | 1 | 0 | 1 | 35 | 14 | 48 | 1.7e-07 | 66.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053568 | MS.gene28242 | 0.82277 | 1.98E-53 | -1.69E-46 |
| MS.gene057717 | MS.gene28242 | 0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene058068 | MS.gene28242 | 0.803227 | 3.86E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28242.t1 | MTR_3g026230 | 84.800 | 250 | 16 | 2 | 1 | 239 | 14 | 252 | 2.25e-114 | 328 |
| MS.gene28242.t1 | MTR_3g026330 | 55.589 | 331 | 55 | 4 | 1 | 239 | 14 | 344 | 1.19e-79 | 243 |
| MS.gene28242.t1 | MTR_3g026290 | 52.738 | 347 | 56 | 4 | 1 | 239 | 14 | 360 | 4.11e-78 | 239 |
| MS.gene28242.t1 | MTR_3g026160 | 83.636 | 165 | 16 | 1 | 1 | 154 | 14 | 178 | 1.42e-71 | 217 |
| MS.gene28242.t1 | MTR_3g026160 | 70.988 | 162 | 33 | 2 | 78 | 239 | 37 | 184 | 4.37e-50 | 162 |
| MS.gene28242.t1 | MTR_3g026240 | 53.191 | 94 | 39 | 2 | 1 | 94 | 14 | 102 | 5.82e-20 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28242.t1 | AT5G09530 | 55.319 | 282 | 62 | 8 | 13 | 233 | 30 | 308 | 6.08e-57 | 185 |
| MS.gene28242.t1 | AT5G09530 | 60.569 | 246 | 57 | 8 | 22 | 232 | 100 | 340 | 5.56e-53 | 175 |
| MS.gene28242.t1 | AT5G09530 | 60.309 | 194 | 57 | 7 | 19 | 198 | 179 | 366 | 1.79e-39 | 140 |
| MS.gene28242.t1 | AT5G09530 | 58.242 | 91 | 30 | 2 | 22 | 106 | 282 | 370 | 1.71e-14 | 72.4 |
| MS.gene28242.t1 | AT5G09520 | 46.207 | 145 | 43 | 4 | 1 | 142 | 16 | 128 | 1.18e-22 | 90.1 |
| MS.gene28242.t1 | AT5G09520 | 56.881 | 109 | 35 | 3 | 123 | 231 | 34 | 130 | 1.54e-19 | 82.0 |
| MS.gene28242.t1 | AT5G09520 | 57.732 | 97 | 34 | 2 | 97 | 193 | 41 | 130 | 2.93e-17 | 75.9 |
| MS.gene28242.t1 | AT5G09520 | 55.814 | 86 | 34 | 1 | 158 | 239 | 34 | 119 | 3.39e-15 | 70.5 |
Find 83 sgRNAs with CRISPR-Local
Find 96 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGTACCTTTGGTATTTC+TGG | 0.080700 | 3.3:-18051056 | None:intergenic |
| TCAGGTATCTTCGGAATTTC+TGG | 0.127877 | 3.3:-18050852 | None:intergenic |
| AGCTCAGGTTTGGGCAATTC+AGG | 0.197717 | 3.3:-18050804 | None:intergenic |
| GGAACATCTTTAGGAGTTTC+AGG | 0.202854 | 3.3:-18051179 | None:intergenic |
| TCAGGTACCTTAGGCAATTC+TGG | 0.231204 | 3.3:-18050645 | None:intergenic |
| AATTCAGGGGCATTAAATTT+AGG | 0.233034 | 3.3:-18050894 | None:intergenic |
| AACTCAGGCTTTGGCAATTC+AGG | 0.237404 | 3.3:-18050870 | None:intergenic |
| TCAGGTACCTTAGGTAATTC+TGG | 0.242157 | 3.3:-18050678 | None:intergenic |
| TTAGGAGTTTCAGGGAATTT+AGG | 0.242346 | 3.3:-18051170 | None:intergenic |
| AACTCTAGCTTTGGTAATTC+AGG | 0.247874 | 3.3:-18051074 | None:intergenic |
| ACCTTTGGTATTTCTGGTTT+GGG | 0.248136 | 3.3:-18051050 | None:intergenic |
| AATTCTGGCTTTGGCAATTC+AGG | 0.265103 | 3.3:-18050663 | None:intergenic |
| GACTTTAGGTAGCTCAGGTT+TGG | 0.265600 | 3.3:-18050814 | None:intergenic |
| TACCTTTGGTATTTCTGGTT+TGG | 0.269930 | 3.3:-18051051 | None:intergenic |
| TTTGGCAATTCAGGGACTTT+AGG | 0.288403 | 3.3:-18050933 | None:intergenic |
| ACTTTAGGTTGCTCAGGTTT+TGG | 0.290710 | 3.3:-18050918 | None:intergenic |
| TTGGGCAACTCAGGGACTTT+TGG | 0.292556 | 3.3:-18051032 | None:intergenic |
| TTAGGTAATTCAGGAATCTT+AGG | 0.302765 | 3.3:-18050621 | None:intergenic |
| TCAGGTACCTTAGGGATATC+TGG | 0.309626 | 3.3:-18050990 | None:intergenic |
| ATAGACAATTCGGGGACTTT+AGG | 0.311738 | 3.3:-18050828 | None:intergenic |
| AGCTCAGGCTTTGGAAGTTC+AGG | 0.319717 | 3.3:-18050696 | None:intergenic |
| AATTTAGGTAACTCGGGTTT+TGG | 0.322053 | 3.3:-18051155 | None:intergenic |
| GTATTGGTTGGAACATCTTT+AGG | 0.328990 | 3.3:-18051188 | None:intergenic |
| TTAGGCAACTCGGGAACTTT+AGG | 0.329308 | 3.3:-18050777 | None:intergenic |
| TACCTTAGGGATATCTGGTT+TGG | 0.332667 | 3.3:-18050985 | None:intergenic |
| ATAGGTGGAAAATCAAGTTT+TGG | 0.353325 | 3.3:-18050582 | None:intergenic |
| ACTTTAGGTAGTTCATGTTT+TGG | 0.353892 | 3.3:-18050951 | None:intergenic |
| ACTTTGGGAAACTCGGGTTT+TGG | 0.357337 | 3.3:-18050744 | None:intergenic |
| TTTGGTAACTCAGGTACCTT+AGG | 0.357882 | 3.3:-18050999 | None:intergenic |
| TTAGGCAACTCAGGAACTTT+GGG | 0.358876 | 3.3:-18050759 | None:intergenic |
| TTGGGCAACTCAGAGACTTT+AGG | 0.363342 | 3.3:-18050966 | None:intergenic |
| ACTTTAGGTAGCTCAGGTTT+GGG | 0.365399 | 3.3:-18050813 | None:intergenic |
| ACCTTAGGTAATTCTGGCTT+TGG | 0.366886 | 3.3:-18050672 | None:intergenic |
| AATTTCTGGCATAGACAATT+CGG | 0.367678 | 3.3:-18050838 | None:intergenic |
| ACATTAACTTTAGGTAGTTC+AGG | 0.370017 | 3.3:-18051122 | None:intergenic |
| AATTCTGGCTTAGGTAATTC+AGG | 0.380278 | 3.3:-18050630 | None:intergenic |
| ATCTTAGGAAGCTTAGGCTT+TGG | 0.384336 | 3.3:-18050606 | None:intergenic |
| AGTTCAGGGACATTAACTTT+AGG | 0.387475 | 3.3:-18051131 | None:intergenic |
| CTCAGGAACTTTGGGAAACT+CGG | 0.389158 | 3.3:-18050751 | None:intergenic |
| AATTTAGGTAACTCAGGCTT+TGG | 0.391757 | 3.3:-18050879 | None:intergenic |
| TTTAGGCAACTCAGGAACTT+TGG | 0.393082 | 3.3:-18050760 | None:intergenic |
| ATTTCTGGCATAGACAATTC+GGG | 0.397522 | 3.3:-18050837 | None:intergenic |
| ATTTCTGGTTTGGGCAACTC+AGG | 0.399272 | 3.3:-18051041 | None:intergenic |
| TTTGGTAATTCAGGTACCTT+TGG | 0.399783 | 3.3:-18051065 | None:intergenic |
| GGAAGCTTAGGCTTTGGTAT+AGG | 0.404531 | 3.3:-18050600 | None:intergenic |
| AACTTAGGTAGCTCAGGCTT+TGG | 0.406351 | 3.3:-18050705 | None:intergenic |
| TCAGGAATCTTAGGAAGCTT+AGG | 0.412874 | 3.3:-18050612 | None:intergenic |
| TTTGGAAGTTCAGGTACCTT+AGG | 0.422522 | 3.3:-18050687 | None:intergenic |
| ACCTTAGGGATATCTGGTTT+GGG | 0.423518 | 3.3:-18050984 | None:intergenic |
| ATCTTAGGTAACTCTAGCTT+TGG | 0.432161 | 3.3:-18051083 | None:intergenic |
| AGTTCCAACTTAAGGAGTAT+TGG | 0.438613 | 3.3:-18051204 | None:intergenic |
| AGAGTATTACAATGGTTGTC+GGG | 0.440611 | 3.3:+18050523 | MS.gene28242:CDS |
| TTTGGCAATTCAGGTACCTT+AGG | 0.442441 | 3.3:-18050654 | None:intergenic |
| TTTGGCAATTCAGGTATCTT+CGG | 0.446064 | 3.3:-18050861 | None:intergenic |
| TCAGGGACTTTAGGTTGCTC+AGG | 0.447776 | 3.3:-18050924 | None:intergenic |
| ACCTTAGGCAATTCTGGCTT+AGG | 0.463421 | 3.3:-18050639 | None:intergenic |
| ACATTAAACTTAGGTAGCTC+AGG | 0.466667 | 3.3:-18050711 | None:intergenic |
| TCGGGGACTTTAGGTAGCTC+AGG | 0.467048 | 3.3:-18050819 | None:intergenic |
| TTGGGCAATTCAGGGAACTT+AGG | 0.475381 | 3.3:-18050795 | None:intergenic |
| TTCAGGGAATTTAGGTAACT+CGG | 0.478958 | 3.3:-18051162 | None:intergenic |
| GACAACCATTGTAATACTCT+TGG | 0.484545 | 3.3:-18050520 | None:intergenic |
| AATTCAGGAACATTAAACTT+AGG | 0.490699 | 3.3:-18050720 | None:intergenic |
| GAACATCTTTAGGAGTTTCA+GGG | 0.495266 | 3.3:-18051178 | None:intergenic |
| TTCAGGGAACTTAGGCAACT+CGG | 0.499436 | 3.3:-18050787 | None:intergenic |
| TTGGTAACTCAGGTACCTTA+GGG | 0.506353 | 3.3:-18050998 | None:intergenic |
| AGCTTAGGCTTTGGTATAGG+TGG | 0.515791 | 3.3:-18050597 | None:intergenic |
| GCATTAAATTTAGGTAACTC+AGG | 0.520808 | 3.3:-18050885 | None:intergenic |
| GCTCAGGTTTGGGCAATTCA+GGG | 0.523757 | 3.3:-18050803 | None:intergenic |
| CCAACTTAAGGAGTATTGGT+TGG | 0.525013 | 3.3:-18051200 | None:intergenic |
| AAGAGTATTACAATGGTTGT+CGG | 0.526376 | 3.3:+18050522 | MS.gene28242:CDS |
| TCAGGAACTTTGGGAAACTC+GGG | 0.528389 | 3.3:-18050750 | None:intergenic |
| TTTCTGGTTTGGGCAACTCA+GGG | 0.529305 | 3.3:-18051040 | None:intergenic |
| TCAGGGAATTTAGGTAACTC+GGG | 0.549724 | 3.3:-18051161 | None:intergenic |
| TCTAGAGTCGAACATACCTC+AGG | 0.561920 | 3.3:+18050557 | MS.gene28242:CDS |
| TCGGGAACTTTAGGCAACTC+AGG | 0.569614 | 3.3:-18050768 | None:intergenic |
| TCAGGGAACTTAGGCAACTC+GGG | 0.582113 | 3.3:-18050786 | None:intergenic |
| GCCAAAGCCAGAATTACCTA+AGG | 0.599842 | 3.3:+18050671 | MS.gene28242:CDS |
| ACCTAAGCCAGAATTGCCTA+AGG | 0.603337 | 3.3:+18050638 | MS.gene28242:CDS |
| TTTCTGGCATAGACAATTCG+GGG | 0.611978 | 3.3:-18050836 | None:intergenic |
| GAGTATTACAATGGTTGTCG+GGG | 0.633099 | 3.3:+18050524 | MS.gene28242:CDS |
| GCCCAAACCAGATATCCCTA+AGG | 0.649847 | 3.3:+18050983 | MS.gene28242:CDS |
| GTCAGCCAAGAGTATTACAA+TGG | 0.663719 | 3.3:+18050515 | MS.gene28242:CDS |
| GCCCAAACCAGAAATACCAA+AGG | 0.685777 | 3.3:+18051049 | MS.gene28242:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AATTCAGGAACATTAAACTT+AGG | - | chr3.3:18050723-18050742 | None:intergenic | 25.0% |
| !!! | TTTTTCAATTCAGGTATCTT+AGG | - | chr3.3:18051101-18051120 | None:intergenic | 25.0% |
| ACATTAACTTTAGGTAGTTC+AGG | - | chr3.3:18051125-18051144 | None:intergenic | 30.0% | |
| GCATTAAATTTAGGTAACTC+AGG | - | chr3.3:18050888-18050907 | None:intergenic | 30.0% | |
| TTAGGTAATTCAGGAATCTT+AGG | - | chr3.3:18050624-18050643 | None:intergenic | 30.0% | |
| ! | ACTTTAGGTAGTTCATGTTT+TGG | - | chr3.3:18050954-18050973 | None:intergenic | 30.0% |
| ! | ATAGGTGGAAAATCAAGTTT+TGG | - | chr3.3:18050585-18050604 | None:intergenic | 30.0% |
| !! | AAGAGTATTACAATGGTTGT+CGG | + | chr3.3:18050522-18050541 | MS.gene28242:CDS | 30.0% |
| !! | AATTCAGGGGCATTAAATTT+AGG | - | chr3.3:18050897-18050916 | None:intergenic | 30.0% |
| !! | AATTTCTGGCATAGACAATT+CGG | - | chr3.3:18050841-18050860 | None:intergenic | 30.0% |
| AATTTAGGTAACTCAGGCTT+TGG | - | chr3.3:18050882-18050901 | None:intergenic | 35.0% | |
| ACATTAAACTTAGGTAGCTC+AGG | - | chr3.3:18050714-18050733 | None:intergenic | 35.0% | |
| AGTTCAGGGACATTAACTTT+AGG | - | chr3.3:18051134-18051153 | None:intergenic | 35.0% | |
| GACAACCATTGTAATACTCT+TGG | - | chr3.3:18050523-18050542 | None:intergenic | 35.0% | |
| TTAGGAGTTTCAGGGAATTT+AGG | - | chr3.3:18051173-18051192 | None:intergenic | 35.0% | |
| TTCAGGGAATTTAGGTAACT+CGG | - | chr3.3:18051165-18051184 | None:intergenic | 35.0% | |
| TTTGGCAATTCAGGTATCTT+CGG | - | chr3.3:18050864-18050883 | None:intergenic | 35.0% | |
| ! | AATTTAGGTAACTCGGGTTT+TGG | - | chr3.3:18051158-18051177 | None:intergenic | 35.0% |
| ! | AGAGTATTACAATGGTTGTC+GGG | + | chr3.3:18050523-18050542 | MS.gene28242:CDS | 35.0% |
| ! | ATCTTAGGTAACTCTAGCTT+TGG | - | chr3.3:18051086-18051105 | None:intergenic | 35.0% |
| ! | GAACATCTTTAGGAGTTTCA+GGG | - | chr3.3:18051181-18051200 | None:intergenic | 35.0% |
| ! | TTTGGTAATTCAGGTACCTT+TGG | - | chr3.3:18051068-18051087 | None:intergenic | 35.0% |
| !! | AACTCTAGCTTTGGTAATTC+AGG | - | chr3.3:18051077-18051096 | None:intergenic | 35.0% |
| !! | AATTCTGGCTTAGGTAATTC+AGG | - | chr3.3:18050633-18050652 | None:intergenic | 35.0% |
| !! | ACCTTTGGTATTTCTGGTTT+GGG | - | chr3.3:18051053-18051072 | None:intergenic | 35.0% |
| !! | ATTTCTGGCATAGACAATTC+GGG | - | chr3.3:18050840-18050859 | None:intergenic | 35.0% |
| !! | GTATTGGTTGGAACATCTTT+AGG | - | chr3.3:18051191-18051210 | None:intergenic | 35.0% |
| !! | TACCTTTGGTATTTCTGGTT+TGG | - | chr3.3:18051054-18051073 | None:intergenic | 35.0% |
| !!! | AAATCAAGTTTTGGAACCTG+AGG | - | chr3.3:18050576-18050595 | None:intergenic | 35.0% |
| !!! | AGTTCAGGCTTTTTCAATTC+AGG | - | chr3.3:18051110-18051129 | None:intergenic | 35.0% |
| !!! | AGTTCATGTTTTGGCAATTC+AGG | - | chr3.3:18050945-18050964 | None:intergenic | 35.0% |
| !!! | GTTCATGTTTTGGCAATTCA+GGG | - | chr3.3:18050944-18050963 | None:intergenic | 35.0% |
| ACTTTAGGTAGCTCAGGTTT+GGG | - | chr3.3:18050816-18050835 | None:intergenic | 40.0% | |
| ATAGACAATTCGGGGACTTT+AGG | - | chr3.3:18050831-18050850 | None:intergenic | 40.0% | |
| ATCTTAGGAAGCTTAGGCTT+TGG | - | chr3.3:18050609-18050628 | None:intergenic | 40.0% | |
| GAGTATTACAATGGTTGTCG+GGG | + | chr3.3:18050524-18050543 | MS.gene28242:CDS | 40.0% | |
| TACCTTAGGGATATCTGGTT+TGG | - | chr3.3:18050988-18051007 | None:intergenic | 40.0% | |
| TCAGGAATCTTAGGAAGCTT+AGG | - | chr3.3:18050615-18050634 | None:intergenic | 40.0% | |
| TCAGGGAATTTAGGTAACTC+GGG | - | chr3.3:18051164-18051183 | None:intergenic | 40.0% | |
| TCAGGTACCTTAGGTAATTC+TGG | - | chr3.3:18050681-18050700 | None:intergenic | 40.0% | |
| TCAGGTACCTTTGGTATTTC+TGG | - | chr3.3:18051059-18051078 | None:intergenic | 40.0% | |
| TCAGGTATCTTCGGAATTTC+TGG | - | chr3.3:18050855-18050874 | None:intergenic | 40.0% | |
| TTAGGCAACTCAGGAACTTT+GGG | - | chr3.3:18050762-18050781 | None:intergenic | 40.0% | |
| TTTAGGCAACTCAGGAACTT+TGG | - | chr3.3:18050763-18050782 | None:intergenic | 40.0% | |
| TTTGGAAGTTCAGGTACCTT+AGG | - | chr3.3:18050690-18050709 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGGACTTT+AGG | - | chr3.3:18050936-18050955 | None:intergenic | 40.0% | |
| TTTGGCAATTCAGGTACCTT+AGG | - | chr3.3:18050657-18050676 | None:intergenic | 40.0% | |
| ! | ACCTTAGGGATATCTGGTTT+GGG | - | chr3.3:18050987-18051006 | None:intergenic | 40.0% |
| ! | GGAACATCTTTAGGAGTTTC+AGG | - | chr3.3:18051182-18051201 | None:intergenic | 40.0% |
| ! | TTGGTAACTCAGGTACCTTA+GGG | - | chr3.3:18051001-18051020 | None:intergenic | 40.0% |
| ! | TTTCTGGCATAGACAATTCG+GGG | - | chr3.3:18050839-18050858 | None:intergenic | 40.0% |
| ! | TTTGGTAACTCAGGTACCTT+AGG | - | chr3.3:18051002-18051021 | None:intergenic | 40.0% |
| !! | AATTCTGGCTTTGGCAATTC+AGG | - | chr3.3:18050666-18050685 | None:intergenic | 40.0% |
| !! | ACCTTAGGTAATTCTGGCTT+TGG | - | chr3.3:18050675-18050694 | None:intergenic | 40.0% |
| !! | GTCAGCCAAGAGTATTACAA+TGG | + | chr3.3:18050515-18050534 | MS.gene28242:CDS | 40.0% |
| !!! | ACTTTAGGTTGCTCAGGTTT+TGG | - | chr3.3:18050921-18050940 | None:intergenic | 40.0% |
| AACTTAGGTAGCTCAGGCTT+TGG | - | chr3.3:18050708-18050727 | None:intergenic | 45.0% | |
| ACCTAAGCCAGAATTGCCTA+AGG | + | chr3.3:18050638-18050657 | MS.gene28242:CDS | 45.0% | |
| GACTTTAGGTAGCTCAGGTT+TGG | - | chr3.3:18050817-18050836 | None:intergenic | 45.0% | |
| GCCAAAGCCAGAATTACCTA+AGG | + | chr3.3:18050671-18050690 | MS.gene28242:CDS | 45.0% | |
| GCCCAAACCAGAAATACCAA+AGG | + | chr3.3:18051049-18051068 | MS.gene28242:CDS | 45.0% | |
| TCAGGTACCTTAGGCAATTC+TGG | - | chr3.3:18050648-18050667 | None:intergenic | 45.0% | |
| TCAGGTACCTTAGGGATATC+TGG | - | chr3.3:18050993-18051012 | None:intergenic | 45.0% | |
| TTAGGCAACTCGGGAACTTT+AGG | - | chr3.3:18050780-18050799 | None:intergenic | 45.0% | |
| TTCAGGGAACTTAGGCAACT+CGG | - | chr3.3:18050790-18050809 | None:intergenic | 45.0% | |
| TTGGGCAACTCAGAGACTTT+AGG | - | chr3.3:18050969-18050988 | None:intergenic | 45.0% | |
| TTGGGCAATTCAGGGAACTT+AGG | - | chr3.3:18050798-18050817 | None:intergenic | 45.0% | |
| ! | AACTCAGGCTTTGGCAATTC+AGG | - | chr3.3:18050873-18050892 | None:intergenic | 45.0% |
| ! | AGCTTAGGCTTTGGTATAGG+TGG | - | chr3.3:18050600-18050619 | None:intergenic | 45.0% |
| ! | CTCAGGAACTTTGGGAAACT+CGG | - | chr3.3:18050754-18050773 | None:intergenic | 45.0% |
| ! | GGAAGCTTAGGCTTTGGTAT+AGG | - | chr3.3:18050603-18050622 | None:intergenic | 45.0% |
| ! | TCAGGAACTTTGGGAAACTC+GGG | - | chr3.3:18050753-18050772 | None:intergenic | 45.0% |
| ! | TCTAGAGTCGAACATACCTC+AGG | + | chr3.3:18050557-18050576 | MS.gene28242:CDS | 45.0% |
| !! | AACTCGGGTTTTGGCAATTC+AGG | - | chr3.3:18050738-18050757 | None:intergenic | 45.0% |
| !! | ACCTTAGGCAATTCTGGCTT+AGG | - | chr3.3:18050642-18050661 | None:intergenic | 45.0% |
| !! | ACTTTGGGAAACTCGGGTTT+TGG | - | chr3.3:18050747-18050766 | None:intergenic | 45.0% |
| !! | ACTTTTGGTAGCTCGGGTTT+TGG | - | chr3.3:18051020-18051039 | None:intergenic | 45.0% |
| !! | ATTTCTGGTTTGGGCAACTC+AGG | - | chr3.3:18051044-18051063 | None:intergenic | 45.0% |
| !! | CTCAGGTTTTGGCAATTCAG+GGG | - | chr3.3:18050910-18050929 | None:intergenic | 45.0% |
| !! | GCTCAGGTTTTGGCAATTCA+GGG | - | chr3.3:18050911-18050930 | None:intergenic | 45.0% |
| !! | TGCTCAGGTTTTGGCAATTC+AGG | - | chr3.3:18050912-18050931 | None:intergenic | 45.0% |
| !! | TTTCTGGTTTGGGCAACTCA+GGG | - | chr3.3:18051043-18051062 | None:intergenic | 45.0% |
| AGCTCAGGTTTGGGCAATTC+AGG | - | chr3.3:18050807-18050826 | None:intergenic | 50.0% | |
| GCCCAAACCAGATATCCCTA+AGG | + | chr3.3:18050983-18051002 | MS.gene28242:CDS | 50.0% | |
| GCTCAGGTTTGGGCAATTCA+GGG | - | chr3.3:18050806-18050825 | None:intergenic | 50.0% | |
| TCAGGGAACTTAGGCAACTC+GGG | - | chr3.3:18050789-18050808 | None:intergenic | 50.0% | |
| TCGGGAACTTTAGGCAACTC+AGG | - | chr3.3:18050771-18050790 | None:intergenic | 50.0% | |
| ! | TTGGGCAACTCAGGGACTTT+TGG | - | chr3.3:18051035-18051054 | None:intergenic | 50.0% |
| !! | AACTCGGGTTTTGGCAGTTC+AGG | - | chr3.3:18051149-18051168 | None:intergenic | 50.0% |
| !! | ACTCGGGTTTTGGCAGTTCA+GGG | - | chr3.3:18051148-18051167 | None:intergenic | 50.0% |
| !! | AGCTCAGGCTTTGGAAGTTC+AGG | - | chr3.3:18050699-18050718 | None:intergenic | 50.0% |
| !! | AGCTCGGGTTTTGGTAACTC+AGG | - | chr3.3:18051011-18051030 | None:intergenic | 50.0% |
| !! | CTCAGGGACTTTTGGTAGCT+CGG | - | chr3.3:18051027-18051046 | None:intergenic | 50.0% |
| !! | TCAGGGACTTTAGGTTGCTC+AGG | - | chr3.3:18050927-18050946 | None:intergenic | 50.0% |
| !! | TCAGGGACTTTTGGTAGCTC+GGG | - | chr3.3:18051026-18051045 | None:intergenic | 50.0% |
| TCGGGGACTTTAGGTAGCTC+AGG | - | chr3.3:18050822-18050841 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 18050498 | 18051217 | 18050498 | ID=MS.gene28242 |
| chr3.3 | mRNA | 18050498 | 18051217 | 18050498 | ID=MS.gene28242.t1;Parent=MS.gene28242 |
| chr3.3 | exon | 18050498 | 18051217 | 18050498 | ID=MS.gene28242.t1.exon1;Parent=MS.gene28242.t1 |
| chr3.3 | CDS | 18050498 | 18051217 | 18050498 | ID=cds.MS.gene28242.t1;Parent=MS.gene28242.t1 |
| Gene Sequence |
| Protein sequence |
