Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28400.t1 | XP_003630249.2 | 96 | 521 | 21 | 0 | 43 | 563 | 54 | 574 | 2.30E-292 | 1014.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28400.t1 | Q9LXD9 | 66.3 | 511 | 161 | 5 | 43 | 545 | 43 | 550 | 2.7e-196 | 686.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28400.t1 | G7LD86 | 96.0 | 521 | 21 | 0 | 43 | 563 | 41 | 561 | 1.7e-292 | 1014.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056633 | MS.gene28400 | -0.836356 | 9.82E-57 | -1.69E-46 |
MS.gene059717 | MS.gene28400 | -0.802716 | 4.92E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28400.t1 | MTR_8g093460 | 95.204 | 563 | 25 | 1 | 1 | 563 | 1 | 561 | 0.0 | 1084 |
MS.gene28400.t1 | MTR_3g095920 | 65.036 | 552 | 169 | 8 | 1 | 543 | 18 | 554 | 0.0 | 740 |
MS.gene28400.t1 | MTR_8g023310 | 37.996 | 529 | 285 | 15 | 45 | 545 | 68 | 581 | 5.37e-104 | 325 |
MS.gene28400.t1 | MTR_4g025690 | 39.114 | 519 | 277 | 15 | 37 | 547 | 20 | 507 | 1.99e-102 | 319 |
MS.gene28400.t1 | MTR_3g091380 | 37.415 | 588 | 306 | 18 | 3 | 554 | 37 | 598 | 2.43e-102 | 321 |
MS.gene28400.t1 | MTR_4g025730 | 38.672 | 512 | 262 | 14 | 43 | 542 | 27 | 498 | 9.61e-102 | 317 |
MS.gene28400.t1 | MTR_4g087980 | 39.434 | 459 | 234 | 10 | 109 | 552 | 86 | 515 | 1.75e-99 | 311 |
MS.gene28400.t1 | MTR_1g008140 | 34.500 | 600 | 306 | 19 | 1 | 554 | 50 | 608 | 2.73e-99 | 313 |
MS.gene28400.t1 | MTR_7g108905 | 36.792 | 530 | 278 | 16 | 46 | 545 | 46 | 548 | 3.28e-99 | 312 |
MS.gene28400.t1 | MTR_7g108890 | 37.017 | 543 | 300 | 13 | 40 | 552 | 31 | 561 | 3.11e-98 | 309 |
MS.gene28400.t1 | MTR_7g108900 | 36.229 | 541 | 275 | 13 | 46 | 542 | 35 | 549 | 4.15e-98 | 309 |
MS.gene28400.t1 | MTR_1g083520 | 35.564 | 523 | 298 | 13 | 37 | 542 | 17 | 517 | 9.05e-97 | 305 |
MS.gene28400.t1 | MTR_2g044810 | 36.007 | 561 | 309 | 16 | 7 | 552 | 8 | 533 | 1.29e-96 | 304 |
MS.gene28400.t1 | MTR_2g044880 | 37.872 | 470 | 229 | 13 | 109 | 552 | 92 | 524 | 6.59e-95 | 300 |
MS.gene28400.t1 | MTR_7g112580 | 33.895 | 593 | 302 | 18 | 3 | 555 | 2 | 544 | 2.26e-94 | 299 |
MS.gene28400.t1 | MTR_4g025670 | 38.913 | 460 | 241 | 11 | 97 | 545 | 51 | 481 | 2.59e-94 | 297 |
MS.gene28400.t1 | MTR_2g044660 | 46.626 | 326 | 156 | 8 | 229 | 552 | 322 | 631 | 6.51e-94 | 300 |
MS.gene28400.t1 | MTR_4g087970 | 38.147 | 464 | 237 | 11 | 109 | 552 | 83 | 516 | 4.86e-93 | 295 |
MS.gene28400.t1 | MTR_8g042910 | 35.455 | 550 | 297 | 13 | 47 | 552 | 76 | 611 | 5.70e-93 | 297 |
MS.gene28400.t1 | MTR_8g104645 | 46.417 | 321 | 148 | 8 | 233 | 545 | 60 | 364 | 2.81e-92 | 288 |
MS.gene28400.t1 | MTR_1g088020 | 48.852 | 305 | 140 | 6 | 243 | 542 | 251 | 544 | 5.44e-92 | 293 |
MS.gene28400.t1 | MTR_8g104655 | 34.023 | 532 | 288 | 13 | 46 | 545 | 33 | 533 | 9.49e-92 | 292 |
MS.gene28400.t1 | MTR_4g124550 | 33.147 | 537 | 305 | 15 | 45 | 552 | 81 | 592 | 3.01e-91 | 292 |
MS.gene28400.t1 | MTR_7g108875 | 34.848 | 594 | 306 | 18 | 1 | 548 | 1 | 559 | 5.32e-91 | 291 |
MS.gene28400.t1 | MTR_1g054880 | 38.106 | 454 | 250 | 11 | 110 | 542 | 104 | 547 | 6.78e-91 | 290 |
MS.gene28400.t1 | MTR_2g436040 | 35.992 | 489 | 270 | 17 | 45 | 518 | 43 | 503 | 5.26e-89 | 287 |
MS.gene28400.t1 | MTR_7g050980 | 35.922 | 515 | 278 | 16 | 60 | 552 | 70 | 554 | 5.81e-89 | 285 |
MS.gene28400.t1 | MTR_1g088225 | 48.197 | 305 | 140 | 7 | 243 | 542 | 251 | 542 | 1.20e-88 | 284 |
MS.gene28400.t1 | MTR_3g010770 | 33.935 | 554 | 300 | 14 | 48 | 552 | 38 | 574 | 5.39e-88 | 283 |
MS.gene28400.t1 | MTR_7g050870 | 36.217 | 497 | 252 | 16 | 86 | 552 | 92 | 553 | 9.71e-88 | 282 |
MS.gene28400.t1 | MTR_4g124520 | 38.283 | 431 | 223 | 10 | 135 | 552 | 120 | 520 | 1.08e-86 | 278 |
MS.gene28400.t1 | MTR_8g042900 | 35.564 | 523 | 294 | 15 | 43 | 545 | 74 | 573 | 1.40e-86 | 280 |
MS.gene28400.t1 | MTR_7g112590 | 31.678 | 584 | 340 | 17 | 3 | 547 | 14 | 577 | 3.66e-86 | 279 |
MS.gene28400.t1 | MTR_3g008640 | 35.048 | 525 | 288 | 15 | 41 | 545 | 28 | 519 | 4.40e-86 | 276 |
MS.gene28400.t1 | MTR_3g008700 | 34.857 | 525 | 289 | 15 | 41 | 545 | 28 | 519 | 1.38e-85 | 275 |
MS.gene28400.t1 | MTR_7g050950 | 36.756 | 487 | 269 | 16 | 72 | 545 | 85 | 545 | 3.05e-85 | 275 |
MS.gene28400.t1 | MTR_7g053360 | 33.776 | 527 | 296 | 15 | 41 | 547 | 28 | 521 | 4.54e-85 | 274 |
MS.gene28400.t1 | MTR_3g008720 | 44.860 | 321 | 154 | 8 | 233 | 545 | 214 | 519 | 7.23e-85 | 273 |
MS.gene28400.t1 | MTR_3g010780 | 34.808 | 520 | 296 | 18 | 45 | 545 | 71 | 566 | 1.71e-84 | 274 |
MS.gene28400.t1 | MTR_3g033690 | 44.444 | 324 | 155 | 9 | 227 | 542 | 209 | 515 | 3.07e-84 | 272 |
MS.gene28400.t1 | MTR_1g083470 | 31.502 | 546 | 320 | 17 | 45 | 561 | 58 | 578 | 1.19e-83 | 272 |
MS.gene28400.t1 | MTR_1g083500 | 31.502 | 546 | 320 | 17 | 45 | 561 | 58 | 578 | 1.19e-83 | 272 |
MS.gene28400.t1 | MTR_1g086210 | 32.778 | 540 | 309 | 17 | 45 | 547 | 41 | 563 | 3.59e-83 | 270 |
MS.gene28400.t1 | MTR_0458s0030 | 50.000 | 264 | 117 | 5 | 283 | 542 | 51 | 303 | 2.83e-82 | 260 |
MS.gene28400.t1 | MTR_1g088040 | 50.000 | 264 | 117 | 5 | 283 | 542 | 51 | 303 | 2.83e-82 | 260 |
MS.gene28400.t1 | MTR_4g035980 | 34.884 | 516 | 301 | 14 | 45 | 545 | 36 | 531 | 1.31e-81 | 265 |
MS.gene28400.t1 | MTR_8g023150 | 34.659 | 528 | 298 | 17 | 42 | 547 | 74 | 576 | 2.51e-81 | 266 |
MS.gene28400.t1 | MTR_1g083510 | 31.712 | 555 | 306 | 16 | 45 | 553 | 56 | 583 | 2.76e-79 | 261 |
MS.gene28400.t1 | MTR_4g005170 | 31.028 | 535 | 337 | 13 | 45 | 561 | 63 | 583 | 3.12e-79 | 261 |
MS.gene28400.t1 | MTR_1g086190 | 35.981 | 428 | 247 | 12 | 138 | 552 | 149 | 562 | 4.35e-79 | 259 |
MS.gene28400.t1 | MTR_4g005180 | 31.157 | 536 | 335 | 14 | 45 | 561 | 45 | 565 | 5.66e-79 | 259 |
MS.gene28400.t1 | MTR_4g120290 | 34.870 | 499 | 280 | 18 | 41 | 518 | 55 | 529 | 2.20e-78 | 258 |
MS.gene28400.t1 | MTR_1g083490 | 30.654 | 535 | 339 | 13 | 45 | 561 | 63 | 583 | 1.18e-77 | 256 |
MS.gene28400.t1 | MTR_7g110560 | 42.368 | 321 | 171 | 8 | 234 | 552 | 240 | 548 | 1.56e-76 | 252 |
MS.gene28400.t1 | MTR_7g110440 | 31.638 | 531 | 316 | 15 | 49 | 549 | 46 | 559 | 2.32e-75 | 250 |
MS.gene28400.t1 | MTR_7g110490 | 32.157 | 510 | 288 | 14 | 83 | 552 | 82 | 573 | 1.02e-73 | 246 |
MS.gene28400.t1 | MTR_7g110510 | 32.157 | 510 | 288 | 14 | 83 | 552 | 82 | 573 | 1.02e-73 | 246 |
MS.gene28400.t1 | MTR_4g120280 | 32.377 | 488 | 299 | 12 | 45 | 518 | 59 | 529 | 2.68e-72 | 242 |
MS.gene28400.t1 | MTR_0618s0020 | 47.699 | 239 | 106 | 4 | 321 | 552 | 1 | 227 | 4.06e-72 | 230 |
MS.gene28400.t1 | MTR_2g044810 | 46.124 | 258 | 128 | 5 | 297 | 552 | 216 | 464 | 1.32e-71 | 237 |
MS.gene28400.t1 | MTR_2g436050 | 32.427 | 515 | 290 | 20 | 40 | 526 | 51 | 535 | 6.00e-70 | 235 |
MS.gene28400.t1 | MTR_8g104580 | 30.571 | 543 | 259 | 16 | 46 | 545 | 25 | 492 | 1.13e-67 | 228 |
MS.gene28400.t1 | MTR_8g088610 | 36.111 | 324 | 195 | 6 | 226 | 547 | 57 | 370 | 4.32e-65 | 217 |
MS.gene28400.t1 | MTR_7g110420 | 31.707 | 492 | 291 | 15 | 83 | 539 | 82 | 563 | 6.08e-63 | 217 |
MS.gene28400.t1 | MTR_5g083620 | 36.697 | 327 | 186 | 10 | 232 | 552 | 44 | 355 | 2.36e-59 | 201 |
MS.gene28400.t1 | MTR_6g088810 | 36.656 | 311 | 165 | 6 | 243 | 543 | 90 | 378 | 1.23e-58 | 200 |
MS.gene28400.t1 | MTR_8g102380 | 35.455 | 330 | 177 | 8 | 229 | 544 | 72 | 379 | 1.12e-56 | 195 |
MS.gene28400.t1 | MTR_7g092780 | 33.537 | 328 | 194 | 6 | 225 | 544 | 78 | 389 | 1.22e-56 | 195 |
MS.gene28400.t1 | MTR_7g110430 | 29.209 | 493 | 274 | 14 | 83 | 549 | 82 | 525 | 1.92e-56 | 198 |
MS.gene28400.t1 | MTR_2g105560 | 34.969 | 326 | 183 | 8 | 231 | 552 | 38 | 338 | 2.89e-56 | 192 |
MS.gene28400.t1 | MTR_7g107180 | 35.913 | 323 | 180 | 9 | 234 | 552 | 7 | 306 | 5.21e-56 | 191 |
MS.gene28400.t1 | MTR_7g111560 | 27.841 | 528 | 337 | 13 | 45 | 556 | 60 | 559 | 1.81e-51 | 185 |
MS.gene28400.t1 | MTR_5g095490 | 35.783 | 313 | 168 | 6 | 242 | 543 | 68 | 358 | 1.47e-49 | 175 |
MS.gene28400.t1 | MTR_1g033050 | 31.776 | 321 | 186 | 7 | 231 | 543 | 14 | 309 | 1.65e-48 | 171 |
MS.gene28400.t1 | MTR_6g024165 | 35.065 | 308 | 166 | 9 | 245 | 542 | 51 | 334 | 5.03e-48 | 171 |
MS.gene28400.t1 | MTR_1g086540 | 31.715 | 309 | 180 | 5 | 245 | 544 | 60 | 346 | 1.09e-45 | 164 |
MS.gene28400.t1 | MTR_6g012800 | 32.602 | 319 | 179 | 5 | 230 | 536 | 1 | 295 | 2.97e-45 | 162 |
MS.gene28400.t1 | MTR_7g102600 | 31.683 | 303 | 184 | 5 | 245 | 542 | 109 | 393 | 8.94e-45 | 163 |
MS.gene28400.t1 | MTR_8g102380 | 36.727 | 275 | 138 | 8 | 229 | 489 | 72 | 324 | 1.44e-44 | 161 |
MS.gene28400.t1 | MTR_5g012600 | 32.154 | 311 | 178 | 7 | 243 | 542 | 71 | 359 | 4.42e-44 | 160 |
MS.gene28400.t1 | MTR_7g011530 | 32.787 | 305 | 171 | 7 | 243 | 536 | 14 | 295 | 7.52e-44 | 159 |
MS.gene28400.t1 | MTR_6g042660 | 31.715 | 309 | 170 | 9 | 243 | 542 | 45 | 321 | 7.57e-42 | 153 |
MS.gene28400.t1 | MTR_5g093970 | 31.596 | 307 | 177 | 8 | 242 | 542 | 50 | 329 | 7.66e-39 | 145 |
MS.gene28400.t1 | MTR_2g033970 | 29.836 | 305 | 187 | 5 | 243 | 542 | 64 | 346 | 4.19e-38 | 144 |
MS.gene28400.t1 | MTR_4g051810 | 31.613 | 310 | 182 | 8 | 234 | 542 | 37 | 317 | 7.99e-38 | 142 |
MS.gene28400.t1 | MTR_4g124740 | 31.193 | 327 | 181 | 11 | 228 | 543 | 47 | 340 | 1.01e-37 | 142 |
MS.gene28400.t1 | MTR_5g088300 | 31.023 | 303 | 181 | 7 | 242 | 544 | 44 | 318 | 2.78e-37 | 140 |
MS.gene28400.t1 | MTR_5g088290 | 31.908 | 304 | 178 | 7 | 242 | 544 | 55 | 330 | 3.58e-37 | 141 |
MS.gene28400.t1 | MTR_2g039530 | 35.452 | 299 | 160 | 11 | 226 | 518 | 43 | 314 | 4.55e-37 | 140 |
MS.gene28400.t1 | MTR_5g083590 | 30.128 | 312 | 157 | 9 | 243 | 552 | 15 | 267 | 2.05e-34 | 131 |
MS.gene28400.t1 | MTR_4g074290 | 29.836 | 305 | 187 | 7 | 243 | 542 | 79 | 361 | 2.34e-34 | 134 |
MS.gene28400.t1 | MTR_5g088280 | 31.046 | 306 | 177 | 7 | 242 | 544 | 46 | 320 | 5.15e-34 | 132 |
MS.gene28400.t1 | MTR_2g073390 | 29.193 | 322 | 201 | 8 | 226 | 542 | 62 | 361 | 9.75e-34 | 132 |
MS.gene28400.t1 | MTR_8g036225 | 29.747 | 316 | 189 | 6 | 234 | 542 | 33 | 322 | 9.90e-34 | 131 |
MS.gene28400.t1 | MTR_6g042690 | 30.769 | 312 | 174 | 9 | 243 | 542 | 47 | 328 | 1.37e-33 | 130 |
MS.gene28400.t1 | MTR_0009s0350 | 27.869 | 305 | 193 | 7 | 243 | 542 | 79 | 361 | 5.94e-30 | 121 |
MS.gene28400.t1 | MTR_0009s0340 | 27.869 | 305 | 193 | 7 | 243 | 542 | 79 | 361 | 5.94e-30 | 121 |
MS.gene28400.t1 | MTR_2g436600 | 27.778 | 306 | 183 | 8 | 243 | 542 | 63 | 336 | 2.58e-29 | 119 |
MS.gene28400.t1 | MTR_6g025590 | 36.782 | 174 | 96 | 6 | 245 | 409 | 59 | 227 | 3.45e-26 | 107 |
MS.gene28400.t1 | MTR_0458s0010 | 47.934 | 121 | 61 | 2 | 243 | 362 | 251 | 370 | 3.02e-25 | 109 |
MS.gene28400.t1 | MTR_0458s0010 | 46.809 | 94 | 44 | 3 | 453 | 542 | 416 | 507 | 1.07e-19 | 92.8 |
MS.gene28400.t1 | MTR_0408s0030 | 35.772 | 123 | 66 | 1 | 418 | 540 | 36 | 145 | 8.76e-19 | 84.0 |
MS.gene28400.t1 | MTR_4g130790 | 29.944 | 177 | 103 | 5 | 265 | 428 | 53 | 221 | 4.42e-15 | 75.9 |
MS.gene28400.t1 | MTR_2g436070 | 29.392 | 296 | 166 | 17 | 40 | 312 | 51 | 326 | 8.40e-15 | 76.6 |
MS.gene28400.t1 | MTR_6g024200 | 31.746 | 126 | 72 | 3 | 418 | 542 | 164 | 276 | 3.03e-14 | 73.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene28400.t1 | AT5G09760 | 66.281 | 519 | 162 | 6 | 37 | 545 | 35 | 550 | 0.0 | 715 |
MS.gene28400.t1 | AT5G09760 | 66.281 | 519 | 162 | 6 | 37 | 545 | 61 | 576 | 0.0 | 714 |
MS.gene28400.t1 | AT5G64640 | 61.131 | 548 | 198 | 7 | 12 | 545 | 55 | 601 | 0.0 | 688 |
MS.gene28400.t1 | AT3G05610 | 35.053 | 562 | 318 | 16 | 1 | 542 | 20 | 554 | 2.35e-105 | 331 |
MS.gene28400.t1 | AT5G49180 | 34.991 | 583 | 311 | 15 | 1 | 547 | 14 | 564 | 5.87e-105 | 327 |
MS.gene28400.t1 | AT3G14310 | 37.636 | 550 | 288 | 17 | 36 | 545 | 50 | 584 | 7.40e-104 | 325 |
MS.gene28400.t1 | AT5G27870 | 34.821 | 560 | 318 | 16 | 1 | 542 | 21 | 551 | 1.81e-102 | 325 |
MS.gene28400.t1 | AT3G06830 | 35.543 | 543 | 279 | 16 | 45 | 547 | 51 | 562 | 3.67e-102 | 320 |
MS.gene28400.t1 | AT2G45220 | 37.984 | 516 | 282 | 15 | 36 | 545 | 21 | 504 | 6.38e-102 | 317 |
MS.gene28400.t1 | AT1G53830 | 36.861 | 567 | 301 | 17 | 13 | 545 | 36 | 579 | 6.94e-101 | 317 |
MS.gene28400.t1 | AT2G26450 | 35.046 | 545 | 299 | 20 | 29 | 545 | 86 | 603 | 2.46e-98 | 311 |
MS.gene28400.t1 | AT4G02330 | 39.364 | 503 | 246 | 16 | 81 | 545 | 82 | 563 | 6.57e-98 | 309 |
MS.gene28400.t1 | AT2G43050 | 39.735 | 453 | 222 | 12 | 113 | 552 | 101 | 515 | 8.45e-97 | 304 |
MS.gene28400.t1 | AT1G11580 | 48.742 | 318 | 148 | 7 | 229 | 543 | 242 | 547 | 2.30e-96 | 304 |
MS.gene28400.t1 | AT3G10720 | 34.495 | 545 | 305 | 11 | 48 | 552 | 82 | 614 | 3.91e-96 | 306 |
MS.gene28400.t1 | AT1G11580 | 48.742 | 318 | 148 | 7 | 229 | 543 | 263 | 568 | 4.83e-96 | 304 |
MS.gene28400.t1 | AT1G23200 | 36.447 | 546 | 277 | 16 | 48 | 552 | 37 | 553 | 1.15e-95 | 302 |
MS.gene28400.t1 | AT1G53840 | 35.101 | 547 | 303 | 16 | 24 | 542 | 54 | 576 | 6.70e-94 | 299 |
MS.gene28400.t1 | AT3G05620 | 45.783 | 332 | 149 | 7 | 227 | 552 | 234 | 540 | 8.45e-94 | 297 |
MS.gene28400.t1 | AT3G60730 | 36.072 | 499 | 278 | 11 | 68 | 542 | 27 | 508 | 2.31e-93 | 295 |
MS.gene28400.t1 | AT5G04970 | 34.307 | 548 | 308 | 11 | 48 | 555 | 87 | 622 | 3.93e-92 | 295 |
MS.gene28400.t1 | AT4G00190 | 36.311 | 515 | 262 | 16 | 47 | 547 | 6 | 468 | 4.01e-92 | 291 |
MS.gene28400.t1 | AT3G49220 | 35.189 | 557 | 288 | 17 | 35 | 554 | 77 | 597 | 4.21e-92 | 295 |
MS.gene28400.t1 | AT3G49220 | 35.189 | 557 | 288 | 17 | 35 | 554 | 122 | 642 | 1.15e-91 | 295 |
MS.gene28400.t1 | AT5G53370 | 33.559 | 590 | 316 | 20 | 4 | 555 | 36 | 587 | 1.23e-90 | 290 |
MS.gene28400.t1 | AT2G26440 | 35.219 | 548 | 296 | 17 | 35 | 552 | 28 | 546 | 3.02e-90 | 288 |
MS.gene28400.t1 | AT5G53370 | 35.688 | 552 | 295 | 21 | 35 | 555 | 101 | 623 | 3.03e-90 | 290 |
MS.gene28400.t1 | AT3G43270 | 47.988 | 323 | 145 | 9 | 233 | 548 | 214 | 520 | 4.56e-90 | 287 |
MS.gene28400.t1 | AT3G10710 | 34.438 | 543 | 299 | 18 | 32 | 552 | 53 | 560 | 9.17e-90 | 287 |
MS.gene28400.t1 | AT3G59010 | 37.059 | 510 | 275 | 16 | 50 | 545 | 43 | 520 | 1.15e-89 | 286 |
MS.gene28400.t1 | AT4G33220 | 46.201 | 329 | 154 | 8 | 231 | 552 | 89 | 401 | 1.30e-89 | 282 |
MS.gene28400.t1 | AT4G33220 | 36.329 | 523 | 263 | 16 | 72 | 552 | 28 | 522 | 1.42e-89 | 286 |
MS.gene28400.t1 | AT1G02810 | 34.848 | 594 | 296 | 20 | 4 | 544 | 8 | 563 | 2.32e-89 | 287 |
MS.gene28400.t1 | AT4G33230 | 33.902 | 528 | 296 | 16 | 45 | 544 | 95 | 597 | 5.03e-89 | 287 |
MS.gene28400.t1 | AT5G04960 | 33.144 | 528 | 291 | 17 | 45 | 547 | 68 | 558 | 6.24e-87 | 280 |
MS.gene28400.t1 | AT2G47550 | 48.882 | 313 | 145 | 9 | 234 | 542 | 246 | 547 | 1.81e-86 | 279 |
MS.gene28400.t1 | AT5G20860 | 34.725 | 527 | 291 | 18 | 43 | 545 | 33 | 530 | 1.54e-84 | 273 |
MS.gene28400.t1 | AT4G02320 | 34.269 | 499 | 278 | 16 | 70 | 547 | 43 | 512 | 2.83e-81 | 264 |
MS.gene28400.t1 | AT3G10720 | 47.566 | 267 | 129 | 4 | 288 | 552 | 1 | 258 | 7.70e-81 | 254 |
MS.gene28400.t1 | AT3G14300 | 34.526 | 559 | 292 | 20 | 21 | 542 | 437 | 958 | 1.90e-80 | 271 |
MS.gene28400.t1 | AT5G51490 | 44.127 | 315 | 161 | 6 | 233 | 542 | 221 | 525 | 1.42e-79 | 260 |
MS.gene28400.t1 | AT4G02300 | 43.631 | 314 | 161 | 6 | 243 | 552 | 230 | 531 | 1.06e-77 | 255 |
MS.gene28400.t1 | AT5G51500 | 43.125 | 320 | 167 | 7 | 233 | 547 | 225 | 534 | 2.10e-77 | 254 |
MS.gene28400.t1 | AT3G47400 | 42.727 | 330 | 173 | 8 | 228 | 552 | 275 | 593 | 4.20e-76 | 252 |
MS.gene28400.t1 | AT4G15980 | 41.250 | 320 | 175 | 5 | 230 | 547 | 388 | 696 | 6.91e-76 | 254 |
MS.gene28400.t1 | AT4G15980 | 41.250 | 320 | 175 | 5 | 230 | 547 | 398 | 706 | 8.11e-76 | 254 |
MS.gene28400.t1 | AT3G27980 | 42.202 | 327 | 164 | 8 | 233 | 552 | 188 | 496 | 3.87e-75 | 247 |
MS.gene28400.t1 | AT1G11370 | 47.656 | 256 | 122 | 5 | 233 | 488 | 45 | 288 | 3.78e-74 | 238 |
MS.gene28400.t1 | AT1G11590 | 40.785 | 331 | 171 | 8 | 229 | 552 | 211 | 523 | 7.93e-72 | 239 |
MS.gene28400.t1 | AT4G03930 | 40.549 | 328 | 176 | 7 | 229 | 552 | 211 | 523 | 3.10e-71 | 238 |
MS.gene28400.t1 | AT2G47040 | 34.110 | 472 | 242 | 13 | 135 | 552 | 138 | 594 | 2.68e-67 | 229 |
MS.gene28400.t1 | AT3G62170 | 41.875 | 320 | 172 | 7 | 236 | 552 | 279 | 587 | 6.67e-67 | 228 |
MS.gene28400.t1 | AT5G20860 | 32.731 | 498 | 256 | 16 | 43 | 518 | 33 | 473 | 7.46e-67 | 226 |
MS.gene28400.t1 | AT2G47030 | 31.272 | 566 | 312 | 18 | 45 | 552 | 41 | 587 | 8.21e-67 | 228 |
MS.gene28400.t1 | AT1G05310 | 35.873 | 315 | 178 | 6 | 241 | 547 | 95 | 393 | 6.24e-57 | 196 |
MS.gene28400.t1 | AT5G19730 | 34.557 | 327 | 180 | 6 | 229 | 543 | 78 | 382 | 8.71e-56 | 192 |
MS.gene28400.t1 | AT2G21610 | 31.788 | 302 | 180 | 5 | 242 | 543 | 58 | 333 | 2.53e-49 | 174 |
MS.gene28400.t1 | AT2G21610 | 31.788 | 302 | 180 | 5 | 242 | 543 | 63 | 338 | 3.21e-49 | 174 |
MS.gene28400.t1 | AT5G55590 | 35.714 | 308 | 165 | 7 | 247 | 543 | 94 | 379 | 6.16e-47 | 169 |
MS.gene28400.t1 | AT3G29090 | 33.115 | 305 | 170 | 5 | 243 | 536 | 15 | 296 | 6.07e-46 | 164 |
MS.gene28400.t1 | AT5G47500 | 32.362 | 309 | 176 | 7 | 245 | 542 | 71 | 357 | 9.12e-46 | 165 |
MS.gene28400.t1 | AT2G36710 | 31.579 | 323 | 193 | 6 | 230 | 547 | 91 | 390 | 4.75e-45 | 164 |
MS.gene28400.t1 | AT3G17060 | 30.945 | 307 | 183 | 6 | 242 | 542 | 53 | 336 | 5.68e-44 | 160 |
MS.gene28400.t1 | AT3G24130 | 32.278 | 316 | 183 | 7 | 243 | 549 | 42 | 335 | 1.31e-43 | 158 |
MS.gene28400.t1 | AT2G36700 | 32.595 | 316 | 181 | 7 | 236 | 542 | 41 | 333 | 8.71e-43 | 156 |
MS.gene28400.t1 | AT5G18990 | 32.903 | 310 | 177 | 5 | 243 | 543 | 37 | 324 | 3.95e-42 | 154 |
MS.gene28400.t1 | AT5G55590 | 38.189 | 254 | 124 | 7 | 247 | 489 | 94 | 325 | 2.93e-41 | 152 |
MS.gene28400.t1 | AT2G19150 | 32.107 | 299 | 185 | 5 | 245 | 542 | 51 | 332 | 3.74e-40 | 149 |
MS.gene28400.t1 | AT5G07430 | 31.392 | 309 | 183 | 7 | 238 | 542 | 72 | 355 | 2.62e-39 | 147 |
MS.gene28400.t1 | AT5G61680 | 29.846 | 325 | 196 | 7 | 227 | 542 | 57 | 358 | 3.35e-39 | 147 |
MS.gene28400.t1 | AT2G47280 | 31.922 | 307 | 180 | 7 | 243 | 542 | 43 | 327 | 4.61e-39 | 146 |
MS.gene28400.t1 | AT5G26810 | 30.124 | 322 | 200 | 6 | 229 | 542 | 29 | 333 | 2.97e-38 | 144 |
MS.gene28400.t1 | AT5G07410 | 28.065 | 310 | 192 | 7 | 238 | 542 | 72 | 355 | 5.18e-37 | 141 |
MS.gene28400.t1 | AT1G69940 | 28.065 | 310 | 192 | 7 | 238 | 542 | 72 | 355 | 6.91e-37 | 140 |
MS.gene28400.t1 | AT5G07420 | 28.947 | 304 | 189 | 6 | 243 | 542 | 75 | 355 | 2.91e-34 | 133 |
MS.gene28400.t1 | AT2G19150 | 32.927 | 246 | 147 | 5 | 245 | 489 | 51 | 279 | 2.37e-32 | 126 |
MS.gene28400.t1 | AT1G44980 | 39.655 | 174 | 101 | 3 | 229 | 402 | 73 | 242 | 1.93e-28 | 114 |
MS.gene28400.t1 | AT3G49220 | 28.344 | 314 | 184 | 15 | 35 | 326 | 122 | 416 | 8.93e-21 | 95.5 |
Find 174 sgRNAs with CRISPR-Local
Find 221 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTCCAGAACTGTTTGATTAA+TGG | 0.170821 | 4.4:-9063587 | MS.gene28400:CDS |
TGATGGCGGATTGGAGAATT+TGG | 0.187737 | 4.4:+9065244 | None:intergenic |
TGGAAAGCGGGTTGCTTTAC+AGG | 0.191752 | 4.4:+9065317 | None:intergenic |
CCACCGAGCGTGACGGTTTA+TGG | 0.212072 | 4.4:-9064849 | MS.gene28400:CDS |
ATTTGGAGAGCGGTGGGATT+TGG | 0.237129 | 4.4:+9065261 | None:intergenic |
AGGGAGAGGGAGTGGGTTGG+TGG | 0.252167 | 4.4:+9065382 | None:intergenic |
CGGTGGGATTTGGAGGGATA+TGG | 0.255325 | 4.4:+9065271 | None:intergenic |
GTTGGTGGTGGTTGTGGTTG+TGG | 0.268522 | 4.4:+9065397 | None:intergenic |
GTGTGTCGTTGGCGTATTTC+AGG | 0.277759 | 4.4:+9064992 | None:intergenic |
GCACTTAAGACACTTTATTA+TGG | 0.281863 | 4.4:-9063407 | MS.gene28400:CDS |
TTATTGTTGGCAGCGGTTCT+TGG | 0.282926 | 4.4:-9063944 | MS.gene28400:intron |
TTCCCTTCAACGCCGTTATC+AGG | 0.292511 | 4.4:+9064694 | None:intergenic |
TTCCATTAATCAAACAGTTC+TGG | 0.295517 | 4.4:+9063585 | None:intergenic |
GAGTGGGTTGGTGGTGGTTG+TGG | 0.298767 | 4.4:+9065391 | None:intergenic |
TATGGAGAATTTGAGAATAC+TGG | 0.319097 | 4.4:-9063389 | MS.gene28400:CDS |
GGAATTGTAAGTGGTCATTC+CGG | 0.321609 | 4.4:+9064537 | None:intergenic |
GAGAGGGAGTGGGTTGGTGG+TGG | 0.348554 | 4.4:+9065385 | None:intergenic |
GCATTATTCTCACCCTTCTC+TGG | 0.352670 | 4.4:+9063659 | None:intergenic |
TCCAACCCTGAGGTGTAATA+AGG | 0.360223 | 4.4:+9063450 | None:intergenic |
TGCGGCATGATTTGTAGAAT+TGG | 0.382944 | 4.4:+9063768 | None:intergenic |
TTATGGCAGGCGACTGGATC+GGG | 0.393179 | 4.4:-9064832 | MS.gene28400:CDS |
GCGCCTGATAACGGCGTTGA+AGG | 0.394185 | 4.4:-9064697 | MS.gene28400:CDS |
CGGAGGAGAGAGTGATGAAA+AGG | 0.400293 | 4.4:+9065430 | None:intergenic |
ATTTGTCTCAGAGGGTGTCT+TGG | 0.408402 | 4.4:-9063355 | MS.gene28400:CDS |
GGTTCTTGGCGATGGATTCA+TGG | 0.410206 | 4.4:-9063930 | MS.gene28400:CDS |
TTGGATCTCTGAGCCGGAGT+TGG | 0.411744 | 4.4:+9065344 | None:intergenic |
GCCACTGCTTGGTGTGCATC+AGG | 0.413544 | 4.4:+9063875 | None:intergenic |
GGTGTCTAGCATAGGAATTC+CGG | 0.423012 | 4.4:-9064800 | MS.gene28400:CDS |
ATCGGGAAGACGGTTATTAC+CGG | 0.426119 | 4.4:-9064580 | MS.gene28400:CDS |
AGAAGTCCTTATTACACCTC+AGG | 0.426563 | 4.4:-9063456 | MS.gene28400:CDS |
GAATTGTAAGTGGTCATTCC+GGG | 0.428833 | 4.4:+9064538 | None:intergenic |
GGGTTTACGAGGAAACAGTT+AGG | 0.430978 | 4.4:-9064645 | MS.gene28400:CDS |
CTGGCCCACATTAGCAGAAC+CGG | 0.431686 | 4.4:+9064561 | None:intergenic |
TGGAGAGCGGTGGGATTTGG+AGG | 0.434100 | 4.4:+9065264 | None:intergenic |
TACAAATCATGCCGCATTGT+AGG | 0.434437 | 4.4:-9063761 | MS.gene28400:CDS |
GGATTGTGCGGTTACGAGAT+TGG | 0.434680 | 4.4:+9065209 | None:intergenic |
TATTACCGGTTCTGCTAATG+TGG | 0.450338 | 4.4:-9064566 | MS.gene28400:CDS |
GGGAGGGAGAGGGAGTGGGT+TGG | 0.451762 | 4.4:+9065379 | None:intergenic |
GTTATCAGGCGCAGCATTAA+CGG | 0.453641 | 4.4:+9064708 | None:intergenic |
TGGATCTCTGAGCCGGAGTT+GGG | 0.455104 | 4.4:+9065345 | None:intergenic |
ATTTCATTCAAGGAGGTGAA+TGG | 0.457694 | 4.4:-9063286 | MS.gene28400:CDS |
TAGTATTTCGATGCAGGTTG+TGG | 0.465426 | 4.4:+9065131 | None:intergenic |
AACCGCACAATCCATGGTTA+AGG | 0.466294 | 4.4:-9065199 | MS.gene28400:CDS |
TTTGTTATATATATTAAAGA+AGG | 0.468157 | 4.4:-9064667 | MS.gene28400:CDS |
CCGTCACGCTCGGTGGTTGG+TGG | 0.469741 | 4.4:+9064856 | None:intergenic |
CACCTCAGGGTTGGATGCCA+TGG | 0.470349 | 4.4:-9063442 | MS.gene28400:CDS |
CAGGCGACTGGATCGGGCGG+AGG | 0.471913 | 4.4:-9064826 | MS.gene28400:CDS |
GACTGGATCGGGCGGAGGAT+CGG | 0.473018 | 4.4:-9064821 | MS.gene28400:CDS |
ACAAATCCTGTACTCTGTGC+AGG | 0.473024 | 4.4:+9063611 | None:intergenic |
ATGAGAGGTTGATGGCGGAT+TGG | 0.475351 | 4.4:+9065235 | None:intergenic |
TTGGCAGCGGTTCTTGGCGA+TGG | 0.477550 | 4.4:-9063938 | MS.gene28400:intron |
GTTAATGCTGCGCCTGATAA+CGG | 0.479390 | 4.4:-9064706 | MS.gene28400:CDS |
ATTCGTTAGTATTTCGATGC+AGG | 0.479611 | 4.4:+9065125 | None:intergenic |
TTGTTATATATATTAAAGAA+GGG | 0.484961 | 4.4:-9064666 | MS.gene28400:CDS |
TCTGCTAATGTGGGCCAGCC+CGG | 0.487185 | 4.4:-9064556 | MS.gene28400:CDS |
AGTGTGCAAGGGAGGGGAGA+AGG | 0.488985 | 4.4:-9064755 | MS.gene28400:CDS |
TGGCAGCGACGGTACGGTTA+CGG | 0.489088 | 4.4:+9065151 | None:intergenic |
GTTGTGGTGGCGAGTGGCGG+AGG | 0.491149 | 4.4:+9065413 | None:intergenic |
GTGTGCAAGGGAGGGGAGAA+GGG | 0.492141 | 4.4:-9064754 | MS.gene28400:CDS |
GGTGGGATTTGGAGGGATAT+GGG | 0.492141 | 4.4:+9065272 | None:intergenic |
GACGGTTTATGGCAGGCGAC+TGG | 0.492580 | 4.4:-9064838 | MS.gene28400:CDS |
GGCTGTTCCAGCAGTCGTAC+TGG | 0.493558 | 4.4:+9065013 | None:intergenic |
CTTCCAAGACTGTCAAATCC+TGG | 0.495802 | 4.4:-9063702 | MS.gene28400:CDS |
TCCTTATTACACCTCAGGGT+TGG | 0.495952 | 4.4:-9063451 | MS.gene28400:CDS |
GGTTTACGAGGAAACAGTTA+GGG | 0.498877 | 4.4:-9064644 | MS.gene28400:CDS |
GGTGGTGGTTGTGGTTGTGG+TGG | 0.499047 | 4.4:+9065400 | None:intergenic |
TGTTACAGTGTGCAAGGGAG+GGG | 0.499195 | 4.4:-9064761 | MS.gene28400:CDS |
CGTTGCTAGAGAGCGTTTCA+AGG | 0.501828 | 4.4:+9064935 | None:intergenic |
GGGTTGCTTTACAGGCTTGT+TGG | 0.502770 | 4.4:+9065325 | None:intergenic |
GTGGTTGTGGTGGCGAGTGG+CGG | 0.505600 | 4.4:+9065410 | None:intergenic |
TCAGCGGAGAATTTCATTCA+AGG | 0.506052 | 4.4:-9063296 | MS.gene28400:CDS |
ACCGACCCTGCACAGAGTAC+AGG | 0.506536 | 4.4:-9063617 | MS.gene28400:CDS |
ACCGACAGCGTGTGTGTCGT+TGG | 0.507485 | 4.4:+9064981 | None:intergenic |
TGGTTCTGATTTGTCTCAGA+GGG | 0.508378 | 4.4:-9063363 | MS.gene28400:CDS |
TTCTCTGGCTTGAGTTGTCT+AGG | 0.508423 | 4.4:+9063674 | None:intergenic |
CTCTAGCAACGCTCTTGCCA+TGG | 0.509613 | 4.4:-9064923 | MS.gene28400:CDS |
TGGAGAATTTGGAGAGCGGT+GGG | 0.512568 | 4.4:+9065255 | None:intergenic |
GGAGAGCGGTGGGATTTGGA+GGG | 0.515066 | 4.4:+9065265 | None:intergenic |
GAACCAGGATTTGACAGTCT+TGG | 0.515146 | 4.4:+9063699 | None:intergenic |
CCCTTGCACACTGTAACATC+CGG | 0.517758 | 4.4:+9064766 | None:intergenic |
TAGCTTACCAGTACGACTGC+TGG | 0.519146 | 4.4:-9065020 | MS.gene28400:CDS |
ATTGGTAGATGAGAGGTTGA+TGG | 0.520863 | 4.4:+9065227 | None:intergenic |
TGAGCCGGAGTTGGGAGAAA+CGG | 0.524436 | 4.4:+9065353 | None:intergenic |
TCTCGTAACCGCACAATCCA+TGG | 0.524692 | 4.4:-9065205 | MS.gene28400:CDS |
CTAATCTGAATGCCACTGCT+TGG | 0.525437 | 4.4:+9063864 | None:intergenic |
TTTATGGCAGGCGACTGGAT+CGG | 0.526485 | 4.4:-9064833 | MS.gene28400:CDS |
TCCATGTGTTAAAGCGTCGT+TGG | 0.528359 | 4.4:+9065080 | None:intergenic |
ACATCCGGAGTCAGCTTCGC+CGG | 0.529491 | 4.4:+9064781 | None:intergenic |
TTCGCATTGTTGTGGAAAGC+GGG | 0.530551 | 4.4:+9065305 | None:intergenic |
GGAGTTGGGAGAAACGGAGG+GGG | 0.532627 | 4.4:+9065359 | None:intergenic |
ATAACGGCGTTGAAGGGAAG+AGG | 0.537877 | 4.4:-9064690 | MS.gene28400:CDS |
GGAGTCATCACAGTACTCAT+AGG | 0.539961 | 4.4:-9063229 | MS.gene28400:CDS |
GAAGTCCTTATTACACCTCA+GGG | 0.543999 | 4.4:-9063455 | MS.gene28400:CDS |
CCGGAGTTGGGAGAAACGGA+GGG | 0.544155 | 4.4:+9065357 | None:intergenic |
TCCGGATGTTACAGTGTGCA+AGG | 0.546027 | 4.4:-9064767 | MS.gene28400:CDS |
TTGGAGAATTTGGAGAGCGG+TGG | 0.547174 | 4.4:+9065254 | None:intergenic |
CTGCCATAAACCGTCACGCT+CGG | 0.549742 | 4.4:+9064846 | None:intergenic |
TGAGTTGTCTAGGACGAACC+AGG | 0.550190 | 4.4:+9063684 | None:intergenic |
TAATGGAACTGAGGATTACA+TGG | 0.550296 | 4.4:-9063570 | MS.gene28400:CDS |
GTTGTGGTTGTGGTGGCGAG+TGG | 0.550641 | 4.4:+9065407 | None:intergenic |
CGCCTGATAACGGCGTTGAA+GGG | 0.550785 | 4.4:-9064696 | MS.gene28400:CDS |
TTAGGGTTCCGTTAGAGAAG+AGG | 0.551723 | 4.4:-9064627 | MS.gene28400:CDS |
TAACTCGTTACATGTTCAGC+GGG | 0.553913 | 4.4:+9063320 | None:intergenic |
GGTTCTACCATGAGCTGTGA+TGG | 0.554105 | 4.4:+9063637 | None:intergenic |
GGCTTGTTGGATCTCTGAGC+CGG | 0.555029 | 4.4:+9065338 | None:intergenic |
GAATTTGAGAATACTGGTGC+TGG | 0.555979 | 4.4:-9063383 | MS.gene28400:CDS |
AAAACTATTTGGGAAGGCCA+TGG | 0.556313 | 4.4:-9063517 | MS.gene28400:CDS |
AGTGATGATTCGCATTGTTG+TGG | 0.559604 | 4.4:+9065297 | None:intergenic |
CGAGCGTGACGGTTTATGGC+AGG | 0.564398 | 4.4:-9064845 | MS.gene28400:CDS |
AAACCGTCACGCTCGGTGGT+TGG | 0.565135 | 4.4:+9064853 | None:intergenic |
ATTCGCATTGTTGTGGAAAG+CGG | 0.565903 | 4.4:+9065304 | None:intergenic |
AATAATGCCATCACAGCTCA+TGG | 0.568760 | 4.4:-9063644 | MS.gene28400:CDS |
ATGTTACAGTGTGCAAGGGA+GGG | 0.568938 | 4.4:-9064762 | MS.gene28400:CDS |
AGGTTGTGGCAGCGACGGTA+CGG | 0.570773 | 4.4:+9065145 | None:intergenic |
AGTTATCAGCACATCGTGGT+AGG | 0.571556 | 4.4:-9063250 | MS.gene28400:CDS |
TCCAACGACGCTTTAACACA+TGG | 0.571581 | 4.4:-9065081 | MS.gene28400:CDS |
TGTAAGTGGTCATTCCGGGC+TGG | 0.576747 | 4.4:+9064542 | None:intergenic |
GGAGGATCGGTGTCTAGCAT+AGG | 0.578370 | 4.4:-9064808 | MS.gene28400:CDS |
TACGGTGGCGGAATTGTAAG+TGG | 0.579224 | 4.4:+9064528 | None:intergenic |
TAGACAACTCAAGCCAGAGA+AGG | 0.581118 | 4.4:-9063672 | MS.gene28400:CDS |
GTTCTAGAATACTCCTTCCA+TGG | 0.582820 | 4.4:+9063500 | None:intergenic |
CTGGTTCTGATTTGTCTCAG+AGG | 0.582934 | 4.4:-9063364 | MS.gene28400:CDS |
AATATAGTTACCTACGGTGG+CGG | 0.583758 | 4.4:+9064516 | None:intergenic |
GGGTGATGGAATCGGGAAGA+CGG | 0.583864 | 4.4:-9064590 | MS.gene28400:CDS |
ACCACATTCCTCTTCTCTAA+CGG | 0.585275 | 4.4:+9064619 | None:intergenic |
GATGTTACAGTGTGCAAGGG+AGG | 0.587016 | 4.4:-9064763 | MS.gene28400:CDS |
GGTAGATGAGAGGTTGATGG+CGG | 0.590167 | 4.4:+9065230 | None:intergenic |
TCCTGTACTCTGTGCAGGGT+CGG | 0.591729 | 4.4:+9063616 | None:intergenic |
GCCGGAGTTGGGAGAAACGG+AGG | 0.592356 | 4.4:+9065356 | None:intergenic |
TGTTATATATATTAAAGAAG+GGG | 0.596580 | 4.4:-9064665 | MS.gene28400:CDS |
TATTAAAGAAGGGGTTTACG+AGG | 0.600470 | 4.4:-9064656 | MS.gene28400:CDS |
CTGTTTGATTAATGGAACTG+AGG | 0.603136 | 4.4:-9063579 | MS.gene28400:CDS |
AGACAACTCAAGCCAGAGAA+GGG | 0.603890 | 4.4:-9063671 | MS.gene28400:CDS |
GATGCAGGTTGTGGCAGCGA+CGG | 0.604045 | 4.4:+9065140 | None:intergenic |
CCCTCCGTTTCTCCCAACTC+CGG | 0.604695 | 4.4:-9065357 | MS.gene28400:CDS |
GTTGCTAGAGAGCGTTTCAA+GGG | 0.605036 | 4.4:+9064936 | None:intergenic |
TGGCAGGCGACTGGATCGGG+CGG | 0.605630 | 4.4:-9064829 | MS.gene28400:CDS |
CAAATCCTGTACTCTGTGCA+GGG | 0.606314 | 4.4:+9063612 | None:intergenic |
AATTCCGGCGAAGCTGACTC+CGG | 0.606340 | 4.4:-9064785 | MS.gene28400:CDS |
CTATTTGGGAAGGCCATGGA+AGG | 0.608614 | 4.4:-9063513 | MS.gene28400:CDS |
GCCAACGACACACACGCTGT+CGG | 0.610858 | 4.4:-9064982 | MS.gene28400:CDS |
ATTACCGGTTCTGCTAATGT+GGG | 0.611976 | 4.4:-9064565 | MS.gene28400:CDS |
AGCCTTAACCATGGATTGTG+CGG | 0.612738 | 4.4:+9065197 | None:intergenic |
AAATCAAAGACACTCGAGCA+TGG | 0.616684 | 4.4:-9065056 | MS.gene28400:CDS |
ATCTAGAATAGCCTTAACCA+TGG | 0.619598 | 4.4:+9065188 | None:intergenic |
AGTGCAAAGTTACCACTCCA+TGG | 0.621412 | 4.4:+9063425 | None:intergenic |
TCCTGATGCACACCAAGCAG+TGG | 0.624479 | 4.4:-9063876 | MS.gene28400:CDS |
CCATAAACCGTCACGCTCGG+TGG | 0.624903 | 4.4:+9064849 | None:intergenic |
GTCATCACAGTACTCATAGG+AGG | 0.626796 | 4.4:-9063226 | MS.gene28400:CDS |
CCACCAACCACCGAGCGTGA+CGG | 0.628676 | 4.4:-9064856 | MS.gene28400:CDS |
TTACGAGATTGGTAGATGAG+AGG | 0.632651 | 4.4:+9065220 | None:intergenic |
ACTTACAATTCCGCCACCGT+AGG | 0.640610 | 4.4:-9064526 | MS.gene28400:intron |
GCAGTCGTACTGGTAAGCTA+AGG | 0.643787 | 4.4:+9065023 | None:intergenic |
CAGGGTTGGATGCCATGGAG+TGG | 0.651700 | 4.4:-9063437 | MS.gene28400:CDS |
CCGGATGTTACAGTGTGCAA+GGG | 0.655507 | 4.4:-9064766 | MS.gene28400:CDS |
CTAACGATCGAAAACACAGC+AGG | 0.657735 | 4.4:-9063899 | MS.gene28400:CDS |
GTCGTACTGGTAAGCTAAGG+CGG | 0.661087 | 4.4:+9065026 | None:intergenic |
CGGAGTTGGGAGAAACGGAG+GGG | 0.666448 | 4.4:+9065358 | None:intergenic |
TAAAATATAGTTACCTACGG+TGG | 0.669120 | 4.4:+9064513 | None:intergenic |
GCGGAGAATTTCATTCAAGG+AGG | 0.669409 | 4.4:-9063293 | MS.gene28400:CDS |
GGAGAAGGGATGCTATAAGA+CGG | 0.671808 | 4.4:-9064740 | MS.gene28400:CDS |
ATAACTCGTTACATGTTCAG+CGG | 0.683767 | 4.4:+9063319 | None:intergenic |
TCCGTTAGAGAAGAGGAATG+TGG | 0.684374 | 4.4:-9064620 | MS.gene28400:CDS |
ATGGAAAAGACACGTCCTCG+TGG | 0.687506 | 4.4:-9064882 | MS.gene28400:CDS |
GGTACGGTTACGGCTAGCTG+AGG | 0.696882 | 4.4:+9065161 | None:intergenic |
GGATTGGAGAATTTGGAGAG+CGG | 0.706980 | 4.4:+9065251 | None:intergenic |
CTCCATGGCATCCAACCCTG+AGG | 0.708740 | 4.4:+9063440 | None:intergenic |
ACATGTAACGAGTTATTCAG+CGG | 0.718970 | 4.4:-9063312 | MS.gene28400:CDS |
AATCTACATTGCCTACAATG+CGG | 0.720239 | 4.4:+9063750 | None:intergenic |
GGTGGTTGGTGGCTTCCACG+AGG | 0.732932 | 4.4:+9064867 | None:intergenic |
GTACTGGTAAGCTAAGGCGG+CGG | 0.750479 | 4.4:+9065029 | None:intergenic |
CGTCGTTGGAGAGAGAAATG+CGG | 0.756471 | 4.4:+9065094 | None:intergenic |
TCTCAGTTATCAGCACATCG+TGG | 0.761406 | 4.4:-9063254 | MS.gene28400:CDS |
AACGTCGTAGGAAAACACCA+TGG | 0.767788 | 4.4:+9064906 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TTGTTATATATATTAAAGAA+GGG | - | chr4.4:9064010-9064029 | MS.gene28400:intron | 10.0% |
!!! | AATTTTAAAATACTAAAAGA+TGG | - | chr4.4:9064377-9064396 | MS.gene28400:intron | 10.0% |
!!! | TTTGTTATATATATTAAAGA+AGG | - | chr4.4:9064009-9064028 | MS.gene28400:intron | 10.0% |
!! | AATTAAAATATAGTTACCTA+CGG | + | chr4.4:9064169-9064188 | None:intergenic | 15.0% |
!! | ATTGTAGTATTGTTAATATT+GGG | - | chr4.4:9064701-9064720 | MS.gene28400:CDS | 15.0% |
!! | TATTGTAGTATTGTTAATAT+TGG | - | chr4.4:9064700-9064719 | MS.gene28400:CDS | 15.0% |
!! | TGTTATATATATTAAAGAAG+GGG | - | chr4.4:9064011-9064030 | MS.gene28400:intron | 15.0% |
!! | AAAGTGCATAAAAACTATTT+GGG | - | chr4.4:9065149-9065168 | MS.gene28400:CDS | 20.0% |
!! | TAAAGTGCATAAAAACTATT+TGG | - | chr4.4:9065148-9065167 | MS.gene28400:CDS | 20.0% |
!! | TCTTTGCATATACTAATATT+CGG | + | chr4.4:9064332-9064351 | None:intergenic | 20.0% |
!!! | AAATAGTTTTTATGCACTTT+AGG | + | chr4.4:9065149-9065168 | None:intergenic | 20.0% |
!!! | ACATTTAAAGTATTCAAAAC+TGG | + | chr4.4:9064454-9064473 | None:intergenic | 20.0% |
!!! | ATTGAGAATTGTGAATTTTT+AGG | - | chr4.4:9064852-9064871 | MS.gene28400:CDS | 20.0% |
!!! | CACTATTTTTTTTTTTTGTC+CGG | + | chr4.4:9064284-9064303 | None:intergenic | 20.0% |
!!! | CATTTAAAGTATTCAAAACT+GGG | + | chr4.4:9064453-9064472 | None:intergenic | 20.0% |
! | CTTTGCATATACTAATATTC+GGG | + | chr4.4:9064331-9064350 | None:intergenic | 25.0% |
! | TTGGGTTATTTGATTATTGT+TGG | - | chr4.4:9064719-9064738 | MS.gene28400:CDS | 25.0% |
!! | ACAAATGAATCAACCTTTTT+AGG | + | chr4.4:9064403-9064422 | None:intergenic | 25.0% |
AGCACATAATTCTTACAATG+AGG | + | chr4.4:9064555-9064574 | None:intergenic | 30.0% | |
GATTGAATTTACATACCAGA+AGG | - | chr4.4:9064427-9064446 | MS.gene28400:intron | 30.0% | |
GCACTTAAGACACTTTATTA+TGG | - | chr4.4:9065269-9065288 | MS.gene28400:CDS | 30.0% | |
TAAAATATAGTTACCTACGG+TGG | + | chr4.4:9064166-9064185 | None:intergenic | 30.0% | |
TACTAAAAGATGGCCTAAAA+AGG | - | chr4.4:9064387-9064406 | MS.gene28400:intron | 30.0% | |
TATGGAGAATTTGAGAATAC+TGG | - | chr4.4:9065287-9065306 | MS.gene28400:CDS | 30.0% | |
TATTTGATTATTGTTGGCAG+CGG | - | chr4.4:9064725-9064744 | MS.gene28400:CDS | 30.0% | |
TGCATAAAAACTATTTGGGA+AGG | - | chr4.4:9065153-9065172 | MS.gene28400:CDS | 30.0% | |
TTCCAGAACTGTTTGATTAA+TGG | - | chr4.4:9065089-9065108 | MS.gene28400:CDS | 30.0% | |
TTCCATTAATCAAACAGTTC+TGG | + | chr4.4:9065094-9065113 | None:intergenic | 30.0% | |
! | GGCAATGTAGATTTTATCTT+CGG | - | chr4.4:9064936-9064955 | MS.gene28400:CDS | 30.0% |
AATCTACATTGCCTACAATG+CGG | + | chr4.4:9064929-9064948 | None:intergenic | 35.0% | |
ACATGTAACGAGTTATTCAG+CGG | - | chr4.4:9065364-9065383 | MS.gene28400:CDS | 35.0% | |
ATAACTCGTTACATGTTCAG+CGG | + | chr4.4:9065360-9065379 | None:intergenic | 35.0% | |
ATTCGTTAGTATTTCGATGC+AGG | + | chr4.4:9063554-9063573 | None:intergenic | 35.0% | |
ATTTCATTCAAGGAGGTGAA+TGG | - | chr4.4:9065390-9065409 | MS.gene28400:CDS | 35.0% | |
CTGTTTGATTAATGGAACTG+AGG | - | chr4.4:9065097-9065116 | MS.gene28400:CDS | 35.0% | |
GCATATACTAATATTCGGGT+GGG | + | chr4.4:9064327-9064346 | None:intergenic | 35.0% | |
TAATGGAACTGAGGATTACA+TGG | - | chr4.4:9065106-9065125 | MS.gene28400:CDS | 35.0% | |
TATTAAAGAAGGGGTTTACG+AGG | - | chr4.4:9064020-9064039 | MS.gene28400:intron | 35.0% | |
TGCATATACTAATATTCGGG+TGG | + | chr4.4:9064328-9064347 | None:intergenic | 35.0% | |
! | AAGAGGAATGTGGTGTTTTT+GGG | - | chr4.4:9064066-9064085 | MS.gene28400:intron | 35.0% |
! | ATCTAGAATAGCCTTAACCA+TGG | + | chr4.4:9063491-9063510 | None:intergenic | 35.0% |
AAAACTATTTGGGAAGGCCA+TGG | - | chr4.4:9065159-9065178 | MS.gene28400:CDS | 40.0% | |
AAATCAAAGACACTCGAGCA+TGG | - | chr4.4:9063620-9063639 | MS.gene28400:CDS | 40.0% | |
AATAATGCCATCACAGCTCA+TGG | - | chr4.4:9065032-9065051 | MS.gene28400:CDS | 40.0% | |
AATATAGTTACCTACGGTGG+CGG | + | chr4.4:9064163-9064182 | None:intergenic | 40.0% | |
ACCACATTCCTCTTCTCTAA+CGG | + | chr4.4:9064060-9064079 | None:intergenic | 40.0% | |
AGAAGTCCTTATTACACCTC+AGG | - | chr4.4:9065220-9065239 | MS.gene28400:CDS | 40.0% | |
AGTGATGATTCGCATTGTTG+TGG | + | chr4.4:9063382-9063401 | None:intergenic | 40.0% | |
ATTCGCATTGTTGTGGAAAG+CGG | + | chr4.4:9063375-9063394 | None:intergenic | 40.0% | |
ATTGGTAGATGAGAGGTTGA+TGG | + | chr4.4:9063452-9063471 | None:intergenic | 40.0% | |
CTTTCATGCGTACAGACTTA+AGG | + | chr4.4:9064663-9064682 | None:intergenic | 40.0% | |
GAAGTCCTTATTACACCTCA+GGG | - | chr4.4:9065221-9065240 | MS.gene28400:CDS | 40.0% | |
GAATTGTAAGTGGTCATTCC+GGG | + | chr4.4:9064141-9064160 | None:intergenic | 40.0% | |
GAATTTGAGAATACTGGTGC+TGG | - | chr4.4:9065293-9065312 | MS.gene28400:CDS | 40.0% | |
GGAATTGTAAGTGGTCATTC+CGG | + | chr4.4:9064142-9064161 | None:intergenic | 40.0% | |
GGTTTACGAGGAAACAGTTA+GGG | - | chr4.4:9064032-9064051 | MS.gene28400:intron | 40.0% | |
GTAACCTTTGTATGCTTGCT+AGG | - | chr4.4:9064472-9064491 | MS.gene28400:intron | 40.0% | |
TAACTCGTTACATGTTCAGC+GGG | + | chr4.4:9065359-9065378 | None:intergenic | 40.0% | |
TAAGGTCGGTATTTAAGCTC+CGG | - | chr4.4:9064262-9064281 | MS.gene28400:intron | 40.0% | |
TACAAATCATGCCGCATTGT+AGG | - | chr4.4:9064915-9064934 | MS.gene28400:CDS | 40.0% | |
TAGTATTTCGATGCAGGTTG+TGG | + | chr4.4:9063548-9063567 | None:intergenic | 40.0% | |
TCAGCGGAGAATTTCATTCA+AGG | - | chr4.4:9065380-9065399 | MS.gene28400:CDS | 40.0% | |
TTACGAGATTGGTAGATGAG+AGG | + | chr4.4:9063459-9063478 | None:intergenic | 40.0% | |
TTAGCTGCATAACACGTGTA+AGG | - | chr4.4:9064244-9064263 | MS.gene28400:intron | 40.0% | |
! | GAAGAGGAATGTGGTGTTTT+TGG | - | chr4.4:9064065-9064084 | MS.gene28400:intron | 40.0% |
! | GTCTTTTCCATAAACGTCGT+AGG | + | chr4.4:9063785-9063804 | None:intergenic | 40.0% |
! | GTGTTTTCCTACGACGTTTA+TGG | - | chr4.4:9063775-9063794 | MS.gene28400:CDS | 40.0% |
! | TGCGGCATGATTTGTAGAAT+TGG | + | chr4.4:9064911-9064930 | None:intergenic | 40.0% |
! | TTTGTATGCTTGCTAGGCAT+GGG | - | chr4.4:9064478-9064497 | MS.gene28400:intron | 40.0% |
!! | ATTACCGGTTCTGCTAATGT+GGG | - | chr4.4:9064111-9064130 | MS.gene28400:intron | 40.0% |
!! | GTTCTAGAATACTCCTTCCA+TGG | + | chr4.4:9065179-9065198 | None:intergenic | 40.0% |
!! | TATTACCGGTTCTGCTAATG+TGG | - | chr4.4:9064110-9064129 | MS.gene28400:intron | 40.0% |
!! | TGGTTCTGATTTGTCTCAGA+GGG | - | chr4.4:9065313-9065332 | MS.gene28400:CDS | 40.0% |
!!! | AATGTGGTGTTTTTGGGTGA+TGG | - | chr4.4:9064072-9064091 | MS.gene28400:intron | 40.0% |
!!! | GTGTTTTTGGGTGATGGAAT+CGG | - | chr4.4:9064078-9064097 | MS.gene28400:intron | 40.0% |
!!! | TGTTTTTGGGTGATGGAATC+GGG | - | chr4.4:9064079-9064098 | MS.gene28400:intron | 40.0% |
AACCGCACAATCCATGGTTA+AGG | - | chr4.4:9063477-9063496 | MS.gene28400:CDS | 45.0% | |
AACGTCGTAGGAAAACACCA+TGG | + | chr4.4:9063773-9063792 | None:intergenic | 45.0% | |
ACAAATCCTGTACTCTGTGC+AGG | + | chr4.4:9065068-9065087 | None:intergenic | 45.0% | |
AGACAACTCAAGCCAGAGAA+GGG | - | chr4.4:9065005-9065024 | MS.gene28400:CDS | 45.0% | |
AGTCTGTACGCATGAAAGCA+TGG | - | chr4.4:9064665-9064684 | MS.gene28400:CDS | 45.0% | |
AGTGCAAAGTTACCACTCCA+TGG | + | chr4.4:9065254-9065273 | None:intergenic | 45.0% | |
AGTTATCAGCACATCGTGGT+AGG | - | chr4.4:9065426-9065445 | MS.gene28400:CDS | 45.0% | |
ATCGGGAAGACGGTTATTAC+CGG | - | chr4.4:9064096-9064115 | MS.gene28400:intron | 45.0% | |
ATGTTACAGTGTGCAAGGGA+GGG | - | chr4.4:9063914-9063933 | MS.gene28400:CDS | 45.0% | |
CAAATCCTGTACTCTGTGCA+GGG | + | chr4.4:9065067-9065086 | None:intergenic | 45.0% | |
CATGCCTAGCAAGCATACAA+AGG | + | chr4.4:9064479-9064498 | None:intergenic | 45.0% | |
CTAACGATCGAAAACACAGC+AGG | - | chr4.4:9064777-9064796 | MS.gene28400:CDS | 45.0% | |
CTAATCTGAATGCCACTGCT+TGG | + | chr4.4:9064815-9064834 | None:intergenic | 45.0% | |
CTGCATAACACGTGTAAGGT+CGG | - | chr4.4:9064248-9064267 | MS.gene28400:intron | 45.0% | |
CTTCCAAGACTGTCAAATCC+TGG | - | chr4.4:9064974-9064993 | MS.gene28400:CDS | 45.0% | |
GAACCAGGATTTGACAGTCT+TGG | + | chr4.4:9064980-9064999 | None:intergenic | 45.0% | |
GCATTATTCTCACCCTTCTC+TGG | + | chr4.4:9065020-9065039 | None:intergenic | 45.0% | |
GCGGAGAATTTCATTCAAGG+AGG | - | chr4.4:9065383-9065402 | MS.gene28400:CDS | 45.0% | |
GGAGAAGGGATGCTATAAGA+CGG | - | chr4.4:9063936-9063955 | MS.gene28400:intron | 45.0% | |
GGAGTCATCACAGTACTCAT+AGG | - | chr4.4:9065447-9065466 | MS.gene28400:CDS | 45.0% | |
GGATTGGAGAATTTGGAGAG+CGG | + | chr4.4:9063428-9063447 | None:intergenic | 45.0% | |
GGGTTTACGAGGAAACAGTT+AGG | - | chr4.4:9064031-9064050 | MS.gene28400:intron | 45.0% | |
GGTGTCTAGCATAGGAATTC+CGG | - | chr4.4:9063876-9063895 | MS.gene28400:CDS | 45.0% | |
GTATTCAAAACTGGGCCTTC+TGG | + | chr4.4:9064445-9064464 | None:intergenic | 45.0% | |
GTCATCACAGTACTCATAGG+AGG | - | chr4.4:9065450-9065469 | MS.gene28400:CDS | 45.0% | |
GTTAATGCTGCGCCTGATAA+CGG | - | chr4.4:9063970-9063989 | MS.gene28400:intron | 45.0% | |
GTTATCAGGCGCAGCATTAA+CGG | + | chr4.4:9063971-9063990 | None:intergenic | 45.0% | |
TAGACAACTCAAGCCAGAGA+AGG | - | chr4.4:9065004-9065023 | MS.gene28400:CDS | 45.0% | |
TCCAACCCTGAGGTGTAATA+AGG | + | chr4.4:9065229-9065248 | None:intergenic | 45.0% | |
TCCAACGACGCTTTAACACA+TGG | - | chr4.4:9063595-9063614 | MS.gene28400:CDS | 45.0% | |
TCCGTTAGAGAAGAGGAATG+TGG | - | chr4.4:9064056-9064075 | MS.gene28400:intron | 45.0% | |
TCCTTATTACACCTCAGGGT+TGG | - | chr4.4:9065225-9065244 | MS.gene28400:CDS | 45.0% | |
TCTCAGTTATCAGCACATCG+TGG | - | chr4.4:9065422-9065441 | MS.gene28400:CDS | 45.0% | |
TTAGGGTTCCGTTAGAGAAG+AGG | - | chr4.4:9064049-9064068 | MS.gene28400:intron | 45.0% | |
TTATTGTTGGCAGCGGTTCT+TGG | - | chr4.4:9064732-9064751 | MS.gene28400:CDS | 45.0% | |
TTCGCATTGTTGTGGAAAGC+GGG | + | chr4.4:9063374-9063393 | None:intergenic | 45.0% | |
! | AGCCTTAACCATGGATTGTG+CGG | + | chr4.4:9063482-9063501 | None:intergenic | 45.0% |
! | CTTTGTATGCTTGCTAGGCA+TGG | - | chr4.4:9064477-9064496 | MS.gene28400:intron | 45.0% |
! | TTCTCTGGCTTGAGTTGTCT+AGG | + | chr4.4:9065005-9065024 | None:intergenic | 45.0% |
! | TTGTATGCTTGCTAGGCATG+GGG | - | chr4.4:9064479-9064498 | MS.gene28400:intron | 45.0% |
!! | ATTTGTCTCAGAGGGTGTCT+TGG | - | chr4.4:9065321-9065340 | MS.gene28400:CDS | 45.0% |
!! | CTGGTTCTGATTTGTCTCAG+AGG | - | chr4.4:9065312-9065331 | MS.gene28400:CDS | 45.0% |
!! | GTTGCTAGAGAGCGTTTCAA+GGG | + | chr4.4:9063743-9063762 | None:intergenic | 45.0% |
!! | TCCATGTGTTAAAGCGTCGT+TGG | + | chr4.4:9063599-9063618 | None:intergenic | 45.0% |
!! | TGATGGCGGATTGGAGAATT+TGG | + | chr4.4:9063435-9063454 | None:intergenic | 45.0% |
ACTTACAATTCCGCCACCGT+AGG | - | chr4.4:9064150-9064169 | MS.gene28400:intron | 50.0% | |
ATGGAAAAGACACGTCCTCG+TGG | - | chr4.4:9063794-9063813 | MS.gene28400:CDS | 50.0% | |
ATTTGGAGAGCGGTGGGATT+TGG | + | chr4.4:9063418-9063437 | None:intergenic | 50.0% | |
CCCTTGCACACTGTAACATC+CGG | + | chr4.4:9063913-9063932 | None:intergenic | 50.0% | |
CCGGATGTTACAGTGTGCAA+GGG | - | chr4.4:9063910-9063929 | MS.gene28400:CDS | 50.0% | |
CGGAGGAGAGAGTGATGAAA+AGG | + | chr4.4:9063249-9063268 | None:intergenic | 50.0% | |
CGTCGTTGGAGAGAGAAATG+CGG | + | chr4.4:9063585-9063604 | None:intergenic | 50.0% | |
CTATTTGGGAAGGCCATGGA+AGG | - | chr4.4:9065163-9065182 | MS.gene28400:CDS | 50.0% | |
GATGTTACAGTGTGCAAGGG+AGG | - | chr4.4:9063913-9063932 | MS.gene28400:CDS | 50.0% | |
GGATTGTGCGGTTACGAGAT+TGG | + | chr4.4:9063470-9063489 | None:intergenic | 50.0% | |
GGTGGGATTTGGAGGGATAT+GGG | + | chr4.4:9063407-9063426 | None:intergenic | 50.0% | |
GGTTCTACCATGAGCTGTGA+TGG | + | chr4.4:9065042-9065061 | None:intergenic | 50.0% | |
TAGCTTACCAGTACGACTGC+TGG | - | chr4.4:9063656-9063675 | MS.gene28400:CDS | 50.0% | |
TCCGGATGTTACAGTGTGCA+AGG | - | chr4.4:9063909-9063928 | MS.gene28400:CDS | 50.0% | |
TCTCGTAACCGCACAATCCA+TGG | - | chr4.4:9063471-9063490 | MS.gene28400:CDS | 50.0% | |
TGGAGAATTTGGAGAGCGGT+GGG | + | chr4.4:9063424-9063443 | None:intergenic | 50.0% | |
TGTTACAGTGTGCAAGGGAG+GGG | - | chr4.4:9063915-9063934 | MS.gene28400:CDS | 50.0% | |
TTCCCTTCAACGCCGTTATC+AGG | + | chr4.4:9063985-9064004 | None:intergenic | 50.0% | |
TTGGAGAATTTGGAGAGCGG+TGG | + | chr4.4:9063425-9063444 | None:intergenic | 50.0% | |
TTTATGGCAGGCGACTGGAT+CGG | - | chr4.4:9063843-9063862 | MS.gene28400:CDS | 50.0% | |
! | ATAACGGCGTTGAAGGGAAG+AGG | - | chr4.4:9063986-9064005 | MS.gene28400:intron | 50.0% |
! | GCAGTCGTACTGGTAAGCTA+AGG | + | chr4.4:9063656-9063675 | None:intergenic | 50.0% |
! | GGGTTGCTTTACAGGCTTGT+TGG | + | chr4.4:9063354-9063373 | None:intergenic | 50.0% |
! | GGTTCTTGGCGATGGATTCA+TGG | - | chr4.4:9064746-9064765 | MS.gene28400:CDS | 50.0% |
! | GTCGTACTGGTAAGCTAAGG+CGG | + | chr4.4:9063653-9063672 | None:intergenic | 50.0% |
! | GTGTGTCGTTGGCGTATTTC+AGG | + | chr4.4:9063687-9063706 | None:intergenic | 50.0% |
! | TGAGTTGTCTAGGACGAACC+AGG | + | chr4.4:9064995-9065014 | None:intergenic | 50.0% |
!! | ATGAGAGGTTGATGGCGGAT+TGG | + | chr4.4:9063444-9063463 | None:intergenic | 50.0% |
!! | CGTTGCTAGAGAGCGTTTCA+AGG | + | chr4.4:9063744-9063763 | None:intergenic | 50.0% |
!! | GGTAGATGAGAGGTTGATGG+CGG | + | chr4.4:9063449-9063468 | None:intergenic | 50.0% |
!! | TACGGTGGCGGAATTGTAAG+TGG | + | chr4.4:9064151-9064170 | None:intergenic | 50.0% |
!! | TGGAAAGCGGGTTGCTTTAC+AGG | + | chr4.4:9063362-9063381 | None:intergenic | 50.0% |
CGGTGGGATTTGGAGGGATA+TGG | + | chr4.4:9063408-9063427 | None:intergenic | 55.0% | |
CTCTAGCAACGCTCTTGCCA+TGG | - | chr4.4:9063753-9063772 | MS.gene28400:CDS | 55.0% | |
CTGCCATAAACCGTCACGCT+CGG | + | chr4.4:9063833-9063852 | None:intergenic | 55.0% | |
CTGGCCCACATTAGCAGAAC+CGG | + | chr4.4:9064118-9064137 | None:intergenic | 55.0% | |
TCCTGATGCACACCAAGCAG+TGG | - | chr4.4:9064800-9064819 | MS.gene28400:CDS | 55.0% | |
TCCTGTACTCTGTGCAGGGT+CGG | + | chr4.4:9065063-9065082 | None:intergenic | 55.0% | |
TGAGCCGGAGTTGGGAGAAA+CGG | + | chr4.4:9063326-9063345 | None:intergenic | 55.0% | |
TGGATCTCTGAGCCGGAGTT+GGG | + | chr4.4:9063334-9063353 | None:intergenic | 55.0% | |
TGTAAGTGGTCATTCCGGGC+TGG | + | chr4.4:9064137-9064156 | None:intergenic | 55.0% | |
TTATGGCAGGCGACTGGATC+GGG | - | chr4.4:9063844-9063863 | MS.gene28400:CDS | 55.0% | |
TTGGATCTCTGAGCCGGAGT+TGG | + | chr4.4:9063335-9063354 | None:intergenic | 55.0% | |
! | AATTCCGGCGAAGCTGACTC+CGG | - | chr4.4:9063891-9063910 | MS.gene28400:CDS | 55.0% |
! | GGAGGATCGGTGTCTAGCAT+AGG | - | chr4.4:9063868-9063887 | MS.gene28400:CDS | 55.0% |
! | GTACTGGTAAGCTAAGGCGG+CGG | + | chr4.4:9063650-9063669 | None:intergenic | 55.0% |
!! | CGCCTGATAACGGCGTTGAA+GGG | - | chr4.4:9063980-9063999 | MS.gene28400:intron | 55.0% |
!! | GGCTTGTTGGATCTCTGAGC+CGG | + | chr4.4:9063341-9063360 | None:intergenic | 55.0% |
!! | GGGTGATGGAATCGGGAAGA+CGG | - | chr4.4:9064086-9064105 | MS.gene28400:intron | 55.0% |
!! | GTTGGTGGTGGTTGTGGTTG+TGG | + | chr4.4:9063282-9063301 | None:intergenic | 55.0% |
ACATCCGGAGTCAGCTTCGC+CGG | + | chr4.4:9063898-9063917 | None:intergenic | 60.0% | |
ACCGACAGCGTGTGTGTCGT+TGG | + | chr4.4:9063698-9063717 | None:intergenic | 60.0% | |
ACCGACCCTGCACAGAGTAC+AGG | - | chr4.4:9065059-9065078 | MS.gene28400:CDS | 60.0% | |
AGGTTGTGGCAGCGACGGTA+CGG | + | chr4.4:9063534-9063553 | None:intergenic | 60.0% | |
AGTGTGCAAGGGAGGGGAGA+AGG | - | chr4.4:9063921-9063940 | MS.gene28400:CDS | 60.0% | |
CACCTCAGGGTTGGATGCCA+TGG | - | chr4.4:9065234-9065253 | MS.gene28400:CDS | 60.0% | |
CAGGGTTGGATGCCATGGAG+TGG | - | chr4.4:9065239-9065258 | MS.gene28400:CDS | 60.0% | |
CCACCGAGCGTGACGGTTTA+TGG | - | chr4.4:9063827-9063846 | MS.gene28400:CDS | 60.0% | |
CCATAAACCGTCACGCTCGG+TGG | + | chr4.4:9063830-9063849 | None:intergenic | 60.0% | |
CCCTCCGTTTCTCCCAACTC+CGG | - | chr4.4:9063319-9063338 | MS.gene28400:CDS | 60.0% | |
CCGGAGTTGGGAGAAACGGA+GGG | + | chr4.4:9063322-9063341 | None:intergenic | 60.0% | |
CGAGCGTGACGGTTTATGGC+AGG | - | chr4.4:9063831-9063850 | MS.gene28400:CDS | 60.0% | |
CGGAGTTGGGAGAAACGGAG+GGG | + | chr4.4:9063321-9063340 | None:intergenic | 60.0% | |
CTCCATGGCATCCAACCCTG+AGG | + | chr4.4:9065239-9065258 | None:intergenic | 60.0% | |
GACGGTTTATGGCAGGCGAC+TGG | - | chr4.4:9063838-9063857 | MS.gene28400:CDS | 60.0% | |
GATGCAGGTTGTGGCAGCGA+CGG | + | chr4.4:9063539-9063558 | None:intergenic | 60.0% | |
GCCAACGACACACACGCTGT+CGG | - | chr4.4:9063694-9063713 | MS.gene28400:CDS | 60.0% | |
GGAGAGCGGTGGGATTTGGA+GGG | + | chr4.4:9063414-9063433 | None:intergenic | 60.0% | |
GGAGTTGGGAGAAACGGAGG+GGG | + | chr4.4:9063320-9063339 | None:intergenic | 60.0% | |
GGCTGTTCCAGCAGTCGTAC+TGG | + | chr4.4:9063666-9063685 | None:intergenic | 60.0% | |
GTGTGCAAGGGAGGGGAGAA+GGG | - | chr4.4:9063922-9063941 | MS.gene28400:CDS | 60.0% | |
TCTGCTAATGTGGGCCAGCC+CGG | - | chr4.4:9064120-9064139 | MS.gene28400:intron | 60.0% | |
TGGAGAGCGGTGGGATTTGG+AGG | + | chr4.4:9063415-9063434 | None:intergenic | 60.0% | |
TGGCAGCGACGGTACGGTTA+CGG | + | chr4.4:9063528-9063547 | None:intergenic | 60.0% | |
TTGGCAGCGGTTCTTGGCGA+TGG | - | chr4.4:9064738-9064757 | MS.gene28400:CDS | 60.0% | |
TTGGGAGAAACGGAGGGGGA+GGG | + | chr4.4:9063316-9063335 | None:intergenic | 60.0% | |
! | AAACCGTCACGCTCGGTGGT+TGG | + | chr4.4:9063826-9063845 | None:intergenic | 60.0% |
! | GGTACGGTTACGGCTAGCTG+AGG | + | chr4.4:9063518-9063537 | None:intergenic | 60.0% |
! | GGTGGTGGTTGTGGTTGTGG+TGG | + | chr4.4:9063279-9063298 | None:intergenic | 60.0% |
! | GTTGTGGTTGTGGTGGCGAG+TGG | + | chr4.4:9063272-9063291 | None:intergenic | 60.0% |
!! | GAGTGGGTTGGTGGTGGTTG+TGG | + | chr4.4:9063288-9063307 | None:intergenic | 60.0% |
!! | GCCACTGCTTGGTGTGCATC+AGG | + | chr4.4:9064804-9064823 | None:intergenic | 60.0% |
!! | GCGCCTGATAACGGCGTTGA+AGG | - | chr4.4:9063979-9063998 | MS.gene28400:intron | 60.0% |
AGAAACGGAGGGGGAGGGAG+AGG | + | chr4.4:9063311-9063330 | None:intergenic | 65.0% | |
CCACCAACCACCGAGCGTGA+CGG | - | chr4.4:9063820-9063839 | MS.gene28400:CDS | 65.0% | |
GAAACGGAGGGGGAGGGAGA+GGG | + | chr4.4:9063310-9063329 | None:intergenic | 65.0% | |
GACTGGATCGGGCGGAGGAT+CGG | - | chr4.4:9063855-9063874 | MS.gene28400:CDS | 65.0% | |
GCCGGAGTTGGGAGAAACGG+AGG | + | chr4.4:9063323-9063342 | None:intergenic | 65.0% | |
GTTGGGAGAAACGGAGGGGG+AGG | + | chr4.4:9063317-9063336 | None:intergenic | 65.0% | |
! | GTGGTTGTGGTGGCGAGTGG+CGG | + | chr4.4:9063269-9063288 | None:intergenic | 65.0% |
!! | AGGGAGAGGGAGTGGGTTGG+TGG | + | chr4.4:9063297-9063316 | None:intergenic | 65.0% |
!! | GAGAGGGAGTGGGTTGGTGG+TGG | + | chr4.4:9063294-9063313 | None:intergenic | 65.0% |
!! | GGTGGTTGGTGGCTTCCACG+AGG | + | chr4.4:9063812-9063831 | None:intergenic | 65.0% |
GAGGGGGAGGGAGAGGGAGT+GGG | + | chr4.4:9063304-9063323 | None:intergenic | 70.0% | |
GGGAGGGAGAGGGAGTGGGT+TGG | + | chr4.4:9063300-9063319 | None:intergenic | 70.0% | |
TGGCAGGCGACTGGATCGGG+CGG | - | chr4.4:9063847-9063866 | MS.gene28400:CDS | 70.0% | |
! | CCGTCACGCTCGGTGGTTGG+TGG | + | chr4.4:9063823-9063842 | None:intergenic | 70.0% |
! | GTTGTGGTGGCGAGTGGCGG+AGG | + | chr4.4:9063266-9063285 | None:intergenic | 70.0% |
CAGGCGACTGGATCGGGCGG+AGG | - | chr4.4:9063850-9063869 | MS.gene28400:CDS | 75.0% | |
GGAGGGGGAGGGAGAGGGAG+TGG | + | chr4.4:9063305-9063324 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 9063217 | 9065481 | 9063217 | ID=MS.gene28400 |
chr4.4 | mRNA | 9063217 | 9065481 | 9063217 | ID=MS.gene28400.t1;Parent=MS.gene28400 |
chr4.4 | exon | 9064527 | 9065481 | 9064527 | ID=MS.gene28400.t1.exon1;Parent=MS.gene28400.t1 |
chr4.4 | CDS | 9064527 | 9065481 | 9064527 | ID=cds.MS.gene28400.t1;Parent=MS.gene28400.t1 |
chr4.4 | exon | 9063217 | 9063953 | 9063217 | ID=MS.gene28400.t1.exon2;Parent=MS.gene28400.t1 |
chr4.4 | CDS | 9063217 | 9063953 | 9063217 | ID=cds.MS.gene28400.t1;Parent=MS.gene28400.t1 |
Gene Sequence |
Protein sequence |