Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059717.t1 | RHN42992.1 | 95.3 | 85 | 4 | 0 | 1 | 85 | 110 | 194 | 2.10E-35 | 157.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059717.t1 | Q9SJ02 | 67.1 | 79 | 26 | 0 | 1 | 79 | 114 | 192 | 1.5e-21 | 103.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059717.t1 | A0A396GPG0 | 95.3 | 85 | 4 | 0 | 1 | 85 | 110 | 194 | 1.5e-35 | 157.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049170 | MS.gene059717 | 0.800959 | 1.13E-48 | -1.69E-46 |
| MS.gene049757 | MS.gene059717 | 0.844109 | 9.26E-59 | -1.69E-46 |
| MS.gene050060 | MS.gene059717 | 0.851194 | 1.04E-60 | -1.69E-46 |
| MS.gene050133 | MS.gene059717 | -0.827132 | 1.85E-54 | -1.69E-46 |
| MS.gene050209 | MS.gene059717 | 0.805371 | 1.38E-49 | -1.69E-46 |
| MS.gene050553 | MS.gene059717 | 0.820384 | 7.06E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene059717 | 0.807449 | 5.03E-50 | -1.69E-46 |
| MS.gene052100 | MS.gene059717 | 0.809998 | 1.43E-50 | -1.69E-46 |
| MS.gene052469 | MS.gene059717 | 0.86754 | 1.27E-65 | -1.69E-46 |
| MS.gene054850 | MS.gene059717 | -0.80053 | 1.38E-48 | -1.69E-46 |
| MS.gene055539 | MS.gene059717 | 0.857444 | 1.63E-62 | -1.69E-46 |
| MS.gene05556 | MS.gene059717 | 0.814712 | 1.34E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene059717 | 0.819061 | 1.42E-52 | -1.69E-46 |
| MS.gene055744 | MS.gene059717 | 0.828069 | 1.10E-54 | -1.69E-46 |
| MS.gene056508 | MS.gene059717 | 0.807935 | 3.96E-50 | -1.69E-46 |
| MS.gene057356 | MS.gene059717 | -0.803508 | 3.37E-49 | -1.69E-46 |
| MS.gene058448 | MS.gene059717 | 0.814425 | 1.55E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene060717 | 0.836278 | 1.03E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene06260 | 0.865848 | 4.39E-65 | -1.69E-46 |
| MS.gene059717 | MS.gene063679 | 0.807665 | 4.52E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene065314 | -0.832355 | 9.91E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene066406 | 0.829662 | 4.54E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene067925 | 0.818317 | 2.09E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene068946 | 0.840575 | 8.01E-58 | -1.69E-46 |
| MS.gene059717 | MS.gene069869 | -0.816158 | 6.39E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene070960 | 0.835164 | 1.97E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene070961 | 0.80948 | 1.85E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene070968 | 0.858295 | 9.08E-63 | -1.69E-46 |
| MS.gene059717 | MS.gene070979 | 0.851326 | 9.55E-61 | -1.69E-46 |
| MS.gene059717 | MS.gene071722 | 0.806453 | 8.17E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene071992 | 0.811307 | 7.48E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene072070 | 0.903217 | 4.36E-79 | -1.69E-46 |
| MS.gene059717 | MS.gene073427 | 0.854652 | 1.07E-61 | -1.69E-46 |
| MS.gene059717 | MS.gene073486 | 0.834142 | 3.56E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene074163 | 0.800135 | 1.66E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene08083 | 0.866233 | 3.31E-65 | -1.69E-46 |
| MS.gene059717 | MS.gene08288 | 0.805231 | 1.47E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene08634 | -0.829624 | 4.64E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene08872 | -0.802621 | 5.14E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene09137 | 0.871501 | 6.51E-67 | -1.69E-46 |
| MS.gene059717 | MS.gene09570 | 0.84272 | 2.18E-58 | -1.69E-46 |
| MS.gene059717 | MS.gene09765 | 0.841942 | 3.50E-58 | -1.69E-46 |
| MS.gene059717 | MS.gene09777 | 0.853977 | 1.67E-61 | -1.69E-46 |
| MS.gene059717 | MS.gene09929 | 0.860397 | 2.13E-63 | -1.69E-46 |
| MS.gene059717 | MS.gene20096 | 0.816489 | 5.39E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene20267 | 0.811488 | 6.83E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene20812 | 0.82905 | 6.39E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene21013 | 0.840825 | 6.89E-58 | -1.69E-46 |
| MS.gene059717 | MS.gene21274 | -0.810237 | 1.27E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene22558 | 0.836133 | 1.12E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene22880 | 0.82093 | 5.29E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene22896 | 0.812632 | 3.85E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene22898 | 0.818823 | 1.60E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene23184 | -0.820253 | 7.56E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene23185 | -0.821038 | 4.99E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene23404 | -0.824414 | 8.18E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene23588 | -0.826264 | 2.98E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene24857 | 0.81324 | 2.83E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene25929 | 0.844398 | 7.75E-59 | -1.69E-46 |
| MS.gene059717 | MS.gene26111 | 0.81623 | 6.16E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene27560 | -0.809253 | 2.07E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene28137 | 0.834413 | 3.04E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene28158 | 0.821062 | 4.93E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene28288 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene28400 | -0.802716 | 4.92E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene29968 | 0.842581 | 2.37E-58 | -1.69E-46 |
| MS.gene059717 | MS.gene31137 | 0.838445 | 2.86E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene32713 | 0.817642 | 2.97E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene33076 | 0.813661 | 2.29E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene33843 | 0.832611 | 8.56E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene33844 | 0.826786 | 2.24E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene34389 | 0.831841 | 1.33E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene34391 | 0.821248 | 4.47E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene34392 | 0.807663 | 4.53E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene34393 | 0.838408 | 2.93E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene34394 | 0.872528 | 2.97E-67 | -1.69E-46 |
| MS.gene059717 | MS.gene34409 | 0.828564 | 8.38E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene34751 | 0.805536 | 1.27E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene35020 | 0.81512 | 1.09E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene35410 | 0.813117 | 3.01E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene36105 | 0.82672 | 2.32E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene36260 | 0.870966 | 9.79E-67 | -1.69E-46 |
| MS.gene059717 | MS.gene36352 | -0.835836 | 1.33E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene37681 | 0.839847 | 1.24E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene37695 | 0.828997 | 6.59E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene37696 | 0.834624 | 2.69E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene37698 | 0.834291 | 3.26E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene37699 | 0.83179 | 1.37E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene38102 | -0.827217 | 1.77E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene38166 | -0.828899 | 6.96E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene39366 | 0.843491 | 1.36E-58 | -1.69E-46 |
| MS.gene059717 | MS.gene40278 | -0.842704 | 2.20E-58 | -1.69E-46 |
| MS.gene059717 | MS.gene40724 | -0.845408 | 4.14E-59 | -1.69E-46 |
| MS.gene059717 | MS.gene40781 | 0.804514 | 2.08E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene41649 | 0.86664 | 2.46E-65 | -1.69E-46 |
| MS.gene059717 | MS.gene42747 | 0.815012 | 1.15E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene43039 | 0.807196 | 5.69E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene47714 | 0.813557 | 2.41E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene48823 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene49436 | 0.823926 | 1.06E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene50226 | 0.813745 | 2.19E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene51034 | 0.847897 | 8.65E-60 | -1.69E-46 |
| MS.gene059717 | MS.gene52786 | 0.836597 | 8.53E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene53366 | -0.805502 | 1.29E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene54461 | -0.811061 | 8.45E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene54795 | 0.81578 | 7.76E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene55433 | 0.800202 | 1.61E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene56490 | 0.833284 | 5.83E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene57196 | 0.810145 | 1.33E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene57390 | 0.800517 | 1.39E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene57720 | 0.814744 | 1.32E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene59760 | 0.827327 | 1.66E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene60748 | 0.844137 | 9.11E-59 | -1.69E-46 |
| MS.gene059717 | MS.gene61373 | 0.838013 | 3.70E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene61544 | 0.864188 | 1.46E-64 | -1.69E-46 |
| MS.gene059717 | MS.gene62091 | 0.808712 | 2.71E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene64825 | 0.802138 | 6.47E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene69343 | 0.833188 | 6.15E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene70164 | 0.832131 | 1.13E-55 | -1.69E-46 |
| MS.gene059717 | MS.gene70216 | 0.821634 | 3.64E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene70297 | 0.800518 | 1.39E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene70327 | 0.883884 | 3.07E-71 | -1.69E-46 |
| MS.gene059717 | MS.gene70601 | 0.827003 | 1.99E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene71300 | 0.824724 | 6.91E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene71752 | 0.85374 | 1.96E-61 | -1.69E-46 |
| MS.gene059717 | MS.gene71924 | -0.836022 | 1.19E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene71925 | -0.811775 | 5.92E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene72142 | 0.839856 | 1.23E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene73446 | 0.859598 | 3.70E-63 | -1.69E-46 |
| MS.gene059717 | MS.gene74253 | -0.81796 | 2.51E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene75660 | 0.823766 | 1.16E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene76534 | -0.811031 | 8.58E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene76802 | 0.827144 | 1.84E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene76902 | -0.82071 | 5.94E-53 | -1.69E-46 |
| MS.gene059717 | MS.gene77541 | 0.816891 | 4.38E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene78467 | 0.879562 | 1.13E-69 | -1.69E-46 |
| MS.gene059717 | MS.gene78531 | 0.800968 | 1.12E-48 | -1.69E-46 |
| MS.gene059717 | MS.gene78667 | 0.808216 | 3.45E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene79903 | 0.833548 | 5.01E-56 | -1.69E-46 |
| MS.gene059717 | MS.gene79962 | -0.803919 | 2.77E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene80172 | 0.81862 | 1.78E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene80547 | 0.81468 | 1.36E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene81254 | 0.813135 | 2.98E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene82050 | 0.844632 | 6.70E-59 | -1.69E-46 |
| MS.gene059717 | MS.gene82725 | 0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene84324 | 0.813051 | 3.11E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene84544 | 0.870966 | 9.78E-67 | -1.69E-46 |
| MS.gene059717 | MS.gene85095 | 0.816469 | 5.44E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene85150 | -0.826478 | 2.65E-54 | -1.69E-46 |
| MS.gene059717 | MS.gene86099 | 0.814167 | 1.77E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene86339 | 0.854885 | 9.13E-62 | -1.69E-46 |
| MS.gene059717 | MS.gene87400 | 0.809379 | 1.95E-50 | -1.69E-46 |
| MS.gene059717 | MS.gene88498 | 0.811833 | 5.74E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene88781 | 0.803241 | 3.83E-49 | -1.69E-46 |
| MS.gene059717 | MS.gene89074 | 0.859554 | 3.82E-63 | -1.69E-46 |
| MS.gene059717 | MS.gene90178 | 0.818283 | 2.12E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene90842 | -0.811242 | 7.72E-51 | -1.69E-46 |
| MS.gene059717 | MS.gene90899 | -0.817703 | 2.87E-52 | -1.69E-46 |
| MS.gene059717 | MS.gene91342 | -0.856441 | 3.21E-62 | -1.69E-46 |
| MS.gene059717 | MS.gene93402 | -0.8485 | 5.89E-60 | -1.69E-46 |
| MS.gene059717 | MS.gene95699 | 0.839694 | 1.36E-57 | -1.69E-46 |
| MS.gene059717 | MS.gene98609 | 0.819657 | 1.04E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene059717.t1 | AT2G21970 | 67.089 | 79 | 26 | 0 | 1 | 79 | 114 | 192 | 9.70e-32 | 110 |
Find 30 sgRNAs with CRISPR-Local
Find 29 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTTGGGTGCGGTTACTA+TGG | 0.311981 | 4.2:-10330495 | MS.gene059717:CDS |
| GAATTCGGTGTTCAGGAAAA+TGG | 0.321728 | 4.2:-10330549 | MS.gene059717:CDS |
| GAGGCGGGTGGGATTTGTTT+GGG | 0.354432 | 4.2:-10330509 | MS.gene059717:CDS |
| GGAGGCGGGTGGGATTTGTT+TGG | 0.366265 | 4.2:-10330510 | MS.gene059717:CDS |
| GGAGTTGGTGACGGGGAATT+CGG | 0.411121 | 4.2:-10330564 | MS.gene059717:CDS |
| TTCAGGAAAATGGATATTGC+AGG | 0.423134 | 4.2:-10330539 | MS.gene059717:CDS |
| TGACGGGGAATTCGGTGTTC+AGG | 0.428337 | 4.2:-10330556 | MS.gene059717:CDS |
| ATCAATTAGCGAATCAATGA+AGG | 0.432023 | 4.2:+10330403 | None:intergenic |
| CTATGGCGGCAATGTTTGCT+TGG | 0.440446 | 4.2:-10330478 | MS.gene059717:CDS |
| GTGACGGTGGAGTTGGTGAC+GGG | 0.448839 | 4.2:-10330572 | MS.gene059717:CDS |
| CTAATTGATCAAATCGTTGA+CGG | 0.458559 | 4.2:-10330389 | MS.gene059717:CDS |
| AATGGATATTGCAGGGATAA+CGG | 0.508574 | 4.2:-10330531 | MS.gene059717:CDS |
| TATTGCAGGGATAACGGAGG+CGG | 0.525078 | 4.2:-10330525 | MS.gene059717:CDS |
| GCAGATGGTGTTTGCAGCGA+CGG | 0.525390 | 4.2:-10330594 | None:intergenic |
| TTTGGGTGCGGTTACTATGG+CGG | 0.548728 | 4.2:-10330492 | MS.gene059717:CDS |
| GGGTGGGATTTGTTTGGGTG+CGG | 0.551031 | 4.2:-10330504 | MS.gene059717:CDS |
| CAGGGATAACGGAGGCGGGT+GGG | 0.551178 | 4.2:-10330520 | MS.gene059717:CDS |
| GCAGGGATAACGGAGGCGGG+TGG | 0.556957 | 4.2:-10330521 | MS.gene059717:CDS |
| GGTGACGGTGGAGTTGGTGA+CGG | 0.559321 | 4.2:-10330573 | MS.gene059717:CDS |
| ATTGCAGGGATAACGGAGGC+GGG | 0.570947 | 4.2:-10330524 | MS.gene059717:CDS |
| TGACGGTGGAGTTGGTGACG+GGG | 0.573283 | 4.2:-10330571 | MS.gene059717:CDS |
| AGCGACGGTGACGGTGGAGT+TGG | 0.587633 | 4.2:-10330579 | MS.gene059717:CDS |
| TGTGAAGATTCGATCCACTC+TGG | 0.602920 | 4.2:+10330439 | None:intergenic |
| GGTGTTTGCAGCGACGGTGA+CGG | 0.625726 | 4.2:-10330588 | MS.gene059717:CDS |
| CTCAAGTGCTCGTACCAGAG+TGG | 0.631041 | 4.2:-10330453 | MS.gene059717:CDS |
| TTGTTCTATGATGATAGCGA+GGG | 0.632266 | 4.2:-10330365 | MS.gene059717:CDS |
| TTTGTTCTATGATGATAGCG+AGG | 0.632796 | 4.2:-10330366 | MS.gene059717:CDS |
| TCAGGAAAATGGATATTGCA+GGG | 0.643208 | 4.2:-10330538 | MS.gene059717:CDS |
| GTTTGCAGCGACGGTGACGG+TGG | 0.675734 | 4.2:-10330585 | MS.gene059717:CDS |
| GGATATTGCAGGGATAACGG+AGG | 0.721943 | 4.2:-10330528 | MS.gene059717:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ATCAATTAGCGAATCAATGA+AGG | + | chr4.2:10330545-10330564 | None:intergenic | 30.0% | |
| CTAATTGATCAAATCGTTGA+CGG | - | chr4.2:10330556-10330575 | MS.gene059717:CDS | 30.0% | |
| AATGGATATTGCAGGGATAA+CGG | - | chr4.2:10330414-10330433 | MS.gene059717:CDS | 35.0% | |
| TCAGGAAAATGGATATTGCA+GGG | - | chr4.2:10330407-10330426 | MS.gene059717:CDS | 35.0% | |
| TTCAGGAAAATGGATATTGC+AGG | - | chr4.2:10330406-10330425 | MS.gene059717:CDS | 35.0% | |
| ! | TTGTTCTATGATGATAGCGA+GGG | - | chr4.2:10330580-10330599 | MS.gene059717:CDS | 35.0% |
| ! | TTTGTTCTATGATGATAGCG+AGG | - | chr4.2:10330579-10330598 | MS.gene059717:CDS | 35.0% |
| !! | GAATTCGGTGTTCAGGAAAA+TGG | - | chr4.2:10330396-10330415 | MS.gene059717:CDS | 40.0% |
| TGTGAAGATTCGATCCACTC+TGG | + | chr4.2:10330509-10330528 | None:intergenic | 45.0% | |
| TTGTTTGGGTGCGGTTACTA+TGG | - | chr4.2:10330450-10330469 | MS.gene059717:CDS | 45.0% | |
| CTATGGCGGCAATGTTTGCT+TGG | - | chr4.2:10330467-10330486 | MS.gene059717:CDS | 50.0% | |
| TTTGGGTGCGGTTACTATGG+CGG | - | chr4.2:10330453-10330472 | MS.gene059717:CDS | 50.0% | |
| ! | GGATATTGCAGGGATAACGG+AGG | - | chr4.2:10330417-10330436 | MS.gene059717:CDS | 50.0% |
| !! | TATTGCAGGGATAACGGAGG+CGG | - | chr4.2:10330420-10330439 | MS.gene059717:CDS | 50.0% |
| CTCAAGTGCTCGTACCAGAG+TGG | - | chr4.2:10330492-10330511 | MS.gene059717:CDS | 55.0% | |
| ! | GAGGCGGGTGGGATTTGTTT+GGG | - | chr4.2:10330436-10330455 | MS.gene059717:CDS | 55.0% |
| ! | GGGTGGGATTTGTTTGGGTG+CGG | - | chr4.2:10330441-10330460 | MS.gene059717:CDS | 55.0% |
| !! | ATTGCAGGGATAACGGAGGC+GGG | - | chr4.2:10330421-10330440 | MS.gene059717:CDS | 55.0% |
| !! | GGAGTTGGTGACGGGGAATT+CGG | - | chr4.2:10330381-10330400 | MS.gene059717:CDS | 55.0% |
| !! | TGACGGGGAATTCGGTGTTC+AGG | - | chr4.2:10330389-10330408 | MS.gene059717:CDS | 55.0% |
| GGTGTTTGCAGCGACGGTGA+CGG | - | chr4.2:10330357-10330376 | MS.gene059717:CDS | 60.0% | |
| ! | GGAGGCGGGTGGGATTTGTT+TGG | - | chr4.2:10330435-10330454 | MS.gene059717:CDS | 60.0% |
| !! | GGTGACGGTGGAGTTGGTGA+CGG | - | chr4.2:10330372-10330391 | MS.gene059717:CDS | 60.0% |
| !! | GTGACGGTGGAGTTGGTGAC+GGG | - | chr4.2:10330373-10330392 | MS.gene059717:CDS | 60.0% |
| !! | TGACGGTGGAGTTGGTGACG+GGG | - | chr4.2:10330374-10330393 | MS.gene059717:CDS | 60.0% |
| ! | AGCGACGGTGACGGTGGAGT+TGG | - | chr4.2:10330366-10330385 | MS.gene059717:CDS | 65.0% |
| ! | GTTTGCAGCGACGGTGACGG+TGG | - | chr4.2:10330360-10330379 | MS.gene059717:CDS | 65.0% |
| !! | CAGGGATAACGGAGGCGGGT+GGG | - | chr4.2:10330425-10330444 | MS.gene059717:CDS | 65.0% |
| !! | GCAGGGATAACGGAGGCGGG+TGG | - | chr4.2:10330424-10330443 | MS.gene059717:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10330355 | 10330612 | 10330355 | ID=MS.gene059717 |
| chr4.2 | mRNA | 10330355 | 10330612 | 10330355 | ID=MS.gene059717.t1;Parent=MS.gene059717 |
| chr4.2 | exon | 10330355 | 10330612 | 10330355 | ID=MS.gene059717.t1.exon1;Parent=MS.gene059717.t1 |
| chr4.2 | CDS | 10330355 | 10330612 | 10330355 | ID=cds.MS.gene059717.t1;Parent=MS.gene059717.t1 |
| Gene Sequence |
| Protein sequence |
