Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28989.t1 | XP_003607364.1 | 93.3 | 389 | 25 | 1 | 1 | 389 | 1 | 388 | 2.50E-176 | 628.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28989.t1 | Q94CJ5 | 76.4 | 276 | 65 | 0 | 114 | 389 | 108 | 383 | 3.1e-119 | 429.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28989.t1 | G7JRM8 | 93.3 | 389 | 25 | 1 | 1 | 389 | 1 | 388 | 1.8e-176 | 628.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene28989 | 0.802415 | 5.67E-49 | -1.69E-46 |
| MS.gene051850 | MS.gene28989 | 0.859867 | 3.07E-63 | -1.69E-46 |
| MS.gene052345 | MS.gene28989 | 0.908938 | 9.88E-82 | -1.69E-46 |
| MS.gene06117 | MS.gene28989 | 0.818736 | 1.68E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28989.t1 | MTR_4g077000 | 97.449 | 392 | 3 | 5 | 1 | 389 | 1 | 388 | 0.0 | 748 |
| MS.gene28989.t1 | MTR_0013s0150 | 72.954 | 281 | 76 | 0 | 109 | 389 | 97 | 377 | 1.67e-153 | 438 |
| MS.gene28989.t1 | MTR_3g033620 | 64.516 | 279 | 97 | 1 | 111 | 389 | 111 | 387 | 7.10e-132 | 384 |
| MS.gene28989.t1 | MTR_3g071970 | 34.828 | 290 | 176 | 5 | 110 | 389 | 430 | 716 | 5.10e-49 | 177 |
| MS.gene28989.t1 | MTR_2g084605 | 31.597 | 288 | 182 | 7 | 110 | 389 | 112 | 392 | 1.60e-34 | 132 |
| MS.gene28989.t1 | MTR_7g064130 | 31.884 | 276 | 171 | 7 | 124 | 389 | 180 | 448 | 4.02e-31 | 123 |
| MS.gene28989.t1 | MTR_7g074090 | 30.472 | 233 | 145 | 4 | 159 | 389 | 90 | 307 | 3.94e-25 | 104 |
| MS.gene28989.t1 | MTR_7g074090 | 30.472 | 233 | 145 | 4 | 159 | 389 | 90 | 307 | 1.72e-24 | 103 |
| MS.gene28989.t1 | MTR_7g074090 | 30.472 | 233 | 145 | 4 | 159 | 389 | 108 | 325 | 3.22e-24 | 103 |
| MS.gene28989.t1 | MTR_7g074070 | 31.633 | 196 | 123 | 3 | 159 | 352 | 101 | 287 | 2.41e-21 | 94.7 |
| MS.gene28989.t1 | MTR_1g045030 | 90.000 | 40 | 3 | 1 | 98 | 137 | 36 | 74 | 3.34e-13 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene28989.t1 | AT5G12470 | 76.512 | 281 | 66 | 0 | 109 | 389 | 103 | 383 | 2.33e-164 | 466 |
| MS.gene28989.t1 | AT3G56140 | 35.211 | 284 | 175 | 4 | 114 | 389 | 207 | 489 | 4.06e-53 | 184 |
| MS.gene28989.t1 | AT3G56140 | 35.714 | 280 | 171 | 4 | 118 | 389 | 430 | 708 | 8.50e-52 | 184 |
| MS.gene28989.t1 | AT3G56140 | 35.714 | 280 | 171 | 4 | 118 | 389 | 430 | 708 | 8.50e-52 | 184 |
| MS.gene28989.t1 | AT2G40400 | 34.375 | 288 | 180 | 4 | 110 | 389 | 413 | 699 | 1.72e-51 | 183 |
| MS.gene28989.t1 | AT2G40400 | 34.375 | 288 | 180 | 4 | 110 | 389 | 413 | 699 | 1.72e-51 | 183 |
| MS.gene28989.t1 | AT2G40400 | 34.034 | 238 | 149 | 3 | 110 | 339 | 413 | 650 | 2.09e-38 | 146 |
| MS.gene28989.t1 | AT5G22790 | 30.035 | 283 | 188 | 5 | 114 | 389 | 154 | 433 | 4.46e-32 | 125 |
| MS.gene28989.t1 | AT2G37860 | 29.964 | 277 | 175 | 7 | 124 | 389 | 164 | 432 | 2.74e-29 | 118 |
| MS.gene28989.t1 | AT2G37860 | 29.964 | 277 | 175 | 7 | 124 | 389 | 164 | 432 | 2.74e-29 | 118 |
| MS.gene28989.t1 | AT3G08640 | 29.752 | 242 | 155 | 5 | 150 | 389 | 94 | 322 | 9.05e-22 | 95.5 |
| MS.gene28989.t1 | AT3G08630 | 28.879 | 232 | 144 | 5 | 163 | 389 | 104 | 319 | 2.92e-21 | 94.4 |
| MS.gene28989.t1 | AT2G37860 | 26.984 | 189 | 124 | 4 | 124 | 303 | 164 | 347 | 8.72e-13 | 69.3 |
| MS.gene28989.t1 | AT2G37860 | 26.984 | 189 | 124 | 4 | 124 | 303 | 164 | 347 | 8.72e-13 | 69.3 |
Find 108 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGAACCGGCAATACGTATT+TGG | 0.115303 | 4.2:+32670753 | MS.gene28989:CDS |
| GATAGGTACCAAGTTCTTTC+TGG | 0.185122 | 4.2:+32670655 | MS.gene28989:intron |
| CTTCCACAGGTTGCTCTCTC+TGG | 0.204802 | 4.2:+32669173 | MS.gene28989:intron |
| AGCAGCACTGGTAGAAAATA+TGG | 0.239676 | 4.2:-32670320 | None:intergenic |
| TGCAAAGAAGGCTGTTAATA+AGG | 0.245873 | 4.2:+32670270 | MS.gene28989:CDS |
| AAGACCTGGAATGCATTATC+TGG | 0.259642 | 4.2:-32669058 | None:intergenic |
| AATTATTGAACAGAGGCTTT+TGG | 0.323263 | 4.2:+32670678 | MS.gene28989:CDS |
| CGAACCGGCAATACGTATTT+GGG | 0.327044 | 4.2:+32670754 | MS.gene28989:CDS |
| TGGATTATGCACGTTGGATA+GGG | 0.345466 | 4.2:+32670881 | MS.gene28989:CDS |
| TTGTTGTTGTTGGCGCAAGC+GGG | 0.349863 | 4.2:+32667201 | MS.gene28989:CDS |
| CTGCCCAGATAATGCATTCC+AGG | 0.359487 | 4.2:+32669054 | MS.gene28989:CDS |
| GTTACCTTGCACAGCGTAAT+GGG | 0.387864 | 4.2:+32669317 | MS.gene28989:intron |
| TGCTGCTTATGGTGTTTATA+TGG | 0.391910 | 4.2:+32670336 | MS.gene28989:CDS |
| CTTTGCTTTGCTGTTCGAAC+CGG | 0.402782 | 4.2:+32670739 | MS.gene28989:CDS |
| GAGAATGAGAAGAAAGAGAA+TGG | 0.416969 | 4.2:-32666906 | None:intergenic |
| TGAAGCAACCACCGCATAAA+CGG | 0.426527 | 4.2:-32667324 | None:intergenic |
| CAATAATTCCAGAAAGAACT+TGG | 0.431709 | 4.2:-32670663 | None:intergenic |
| TGAACCCAAATACGTATTGC+CGG | 0.437016 | 4.2:-32670758 | None:intergenic |
| GAATGAGGCGTTGTTGTTGT+TGG | 0.453993 | 4.2:+32667191 | MS.gene28989:CDS |
| GTGGATTATGCACGTTGGAT+AGG | 0.462939 | 4.2:+32670880 | MS.gene28989:CDS |
| GGTTACCTTGCACAGCGTAA+TGG | 0.466762 | 4.2:+32669316 | MS.gene28989:intron |
| GAAAGAAGGTACGGCGGAAT+CGG | 0.471592 | 4.2:-32667058 | None:intergenic |
| CCACCACTTGGAGTCAGTGC+AGG | 0.480173 | 4.2:+32669007 | MS.gene28989:CDS |
| TGACTTAGCTTCGGCTATCA+AGG | 0.481342 | 4.2:+32667248 | MS.gene28989:CDS |
| AGTTGGATCTGCTTCGTCAC+TGG | 0.485700 | 4.2:+32669354 | MS.gene28989:CDS |
| TATCAAGGAAGGTAAGATTC+CGG | 0.485810 | 4.2:+32667263 | MS.gene28989:CDS |
| TATTCTTTCTTGCAAAGAGT+TGG | 0.485972 | 4.2:+32669203 | MS.gene28989:CDS |
| GTTGTTGTTGTTGGCGCAAG+CGG | 0.486703 | 4.2:+32667200 | MS.gene28989:CDS |
| GAATCTCCGCCGTCGAAAGA+AGG | 0.486782 | 4.2:-32667072 | None:intergenic |
| GAAGAAAGAGAATGGGAAGA+AGG | 0.488748 | 4.2:-32666898 | None:intergenic |
| GGGAGGGATTTAGGAGTGGA+AGG | 0.490063 | 4.2:-32666928 | None:intergenic |
| AGAATGAGAAGAAAGAGAAT+GGG | 0.491291 | 4.2:-32666905 | None:intergenic |
| TTCGACGGCGGAGATTCATT+CGG | 0.491604 | 4.2:+32667078 | MS.gene28989:CDS |
| ATGCGGTGGTTGCTTCAGTT+TGG | 0.491847 | 4.2:+32667330 | MS.gene28989:CDS |
| CGGTGGTTGCTTCAGTTTGG+TGG | 0.501146 | 4.2:+32667333 | MS.gene28989:CDS |
| GATCTGTGCGGTGGTTGATA+CGG | 0.503940 | 4.2:-32667014 | None:intergenic |
| GAGAAGGAGAAGGAGTGATA+CGG | 0.506494 | 4.2:-32666984 | None:intergenic |
| TGCCGCAATTAATGCAAAGA+AGG | 0.515316 | 4.2:+32670258 | MS.gene28989:CDS |
| GCAGCACTGGTAGAAAATAT+GGG | 0.517884 | 4.2:-32670319 | None:intergenic |
| GGCGCAAGCGGGGAGGTCGT+TGG | 0.524312 | 4.2:+32667212 | MS.gene28989:CDS |
| ATACGGAGACGGAGGGAAAG+TGG | 0.524321 | 4.2:-32666967 | None:intergenic |
| CGGAAAGAAGGAGAAGGAGA+AGG | 0.527272 | 4.2:-32666994 | None:intergenic |
| AGTTTATTTACCTGCACCTA+CGG | 0.529483 | 4.2:+32668973 | MS.gene28989:CDS |
| GAAAGAGAATGGGAAGAAGG+AGG | 0.529887 | 4.2:-32666895 | None:intergenic |
| CTAAGAGAAACCGTAGGTGC+AGG | 0.531784 | 4.2:-32668983 | None:intergenic |
| TCCGCCGTACCTTCTTTCGA+CGG | 0.532915 | 4.2:+32667063 | MS.gene28989:CDS |
| ATGGGAAGAAGGAGGAACGA+AGG | 0.532917 | 4.2:-32666887 | None:intergenic |
| AGAAGGTACGGCGGAATCGG+TGG | 0.534117 | 4.2:-32667055 | None:intergenic |
| GTTGGATTTGAATGCGGCGT+CGG | 0.540654 | 4.2:+32667399 | MS.gene28989:CDS |
| CACCACTTGGAGTCAGTGCA+GGG | 0.544286 | 4.2:+32669008 | MS.gene28989:CDS |
| CACTAAGTACAAGCTTGTGC+TGG | 0.546248 | 4.2:-32670714 | None:intergenic |
| GTACGGCGGAATCGGTGGAA+TGG | 0.550207 | 4.2:-32667050 | None:intergenic |
| AGAAGGGAGGGATTTAGGAG+TGG | 0.561658 | 4.2:-32666932 | None:intergenic |
| TGGCAGTTTCTAGCAACCTC+AGG | 0.563504 | 4.2:+32670356 | MS.gene28989:CDS |
| AAAGAGCGGCGGATTGAATG+AGG | 0.564436 | 4.2:+32667176 | MS.gene28989:CDS |
| AGCCTTCTTTGCATTAATTG+CGG | 0.566973 | 4.2:-32670260 | None:intergenic |
| CGGTGGTTGATACGGAAAGA+AGG | 0.568152 | 4.2:-32667006 | None:intergenic |
| AGCTTGTGCTGGTGCAACAA+AGG | 0.568917 | 4.2:-32670703 | None:intergenic |
| ATAAACACCATAAGCAGCAC+TGG | 0.569201 | 4.2:-32670332 | None:intergenic |
| GTTTCTCTTAGACCACCACT+TGG | 0.569402 | 4.2:+32668995 | MS.gene28989:CDS |
| AGACCTGGAATGCATTATCT+GGG | 0.570627 | 4.2:-32669057 | None:intergenic |
| GGAGGACACGGTGGAGATGA+CGG | 0.571833 | 4.2:+32667099 | MS.gene28989:CDS |
| GAGGTCGTTGGAGAGTGTGC+CGG | 0.573713 | 4.2:+32667224 | MS.gene28989:CDS |
| GGACATGGACACGGAGGAGA+CGG | 0.576585 | 4.2:+32667135 | MS.gene28989:CDS |
| TTCCGGCGTCTGTAGTTGAG+AGG | 0.579757 | 4.2:+32667280 | MS.gene28989:CDS |
| TGTTGTTGGCGCAAGCGGGG+AGG | 0.580429 | 4.2:+32667205 | MS.gene28989:CDS |
| GGATTATGCACGTTGGATAG+GGG | 0.580434 | 4.2:+32670882 | MS.gene28989:CDS |
| TGTTGTTGTTGGCGCAAGCG+GGG | 0.580768 | 4.2:+32667202 | MS.gene28989:CDS |
| GAGAAGGAGTGATACGGAGA+CGG | 0.585406 | 4.2:-32666978 | None:intergenic |
| TGTGCCGGCTGACTTAGCTT+CGG | 0.587224 | 4.2:+32667239 | MS.gene28989:CDS |
| GCAAAGAGTTGGTGCAATTG+TGG | 0.590276 | 4.2:+32669214 | MS.gene28989:CDS |
| ATAGCCGAAGCTAAGTCAGC+CGG | 0.591802 | 4.2:-32667243 | None:intergenic |
| CCTGCACTGACTCCAAGTGG+TGG | 0.593747 | 4.2:-32669007 | None:intergenic |
| TTTCTGGAATTATTGAACAG+AGG | 0.594616 | 4.2:+32670671 | MS.gene28989:CDS |
| GCTAAGGTTGGATTTGAATG+CGG | 0.594787 | 4.2:+32667393 | MS.gene28989:CDS |
| AGAAGTCTCCGTTTATGCGG+TGG | 0.595528 | 4.2:+32667316 | MS.gene28989:CDS |
| TCCGCCGTCGAAAGAAGGTA+CGG | 0.595611 | 4.2:-32667067 | None:intergenic |
| AACAATGACGGACATGGACA+CGG | 0.598016 | 4.2:+32667126 | MS.gene28989:CDS |
| CGGAGACGGAGGGAAAGTGG+AGG | 0.602640 | 4.2:-32666964 | None:intergenic |
| AGCAATGACGGAGGAAAGAG+CGG | 0.605733 | 4.2:+32667162 | MS.gene28989:CDS |
| GGAGACGGAGAAAGCAATGA+CGG | 0.605922 | 4.2:+32667150 | MS.gene28989:CDS |
| TTGAGAAGTCTCCGTTTATG+CGG | 0.611377 | 4.2:+32667313 | MS.gene28989:CDS |
| GGAGACGGAGGGAAAGTGGA+GGG | 0.611726 | 4.2:-32666963 | None:intergenic |
| ATGCATTATCTGGGCAGTTG+TGG | 0.612230 | 4.2:-32669048 | None:intergenic |
| TTGATACGGAAAGAAGGAGA+AGG | 0.613206 | 4.2:-32667000 | None:intergenic |
| GACGGCGGAGATTCATTCGG+AGG | 0.615425 | 4.2:+32667081 | MS.gene28989:CDS |
| GGAGATTCATTCGGAGGACA+CGG | 0.619025 | 4.2:+32667087 | MS.gene28989:CDS |
| GGAAATTGTGTTCGCCGATG+TGG | 0.619314 | 4.2:+32668239 | MS.gene28989:CDS |
| AAGGAGTGATACGGAGACGG+AGG | 0.622593 | 4.2:-32666975 | None:intergenic |
| TTAGCTTCGGCTATCAAGGA+AGG | 0.626770 | 4.2:+32667252 | MS.gene28989:CDS |
| GCCCCTGCACTGACTCCAAG+TGG | 0.636274 | 4.2:-32669010 | None:intergenic |
| AACCTCTCAACTACAGACGC+CGG | 0.638287 | 4.2:-32667282 | None:intergenic |
| AGGAGTGATACGGAGACGGA+GGG | 0.638317 | 4.2:-32666974 | None:intergenic |
| CTGCTGCTGAGTATGATCGC+CGG | 0.647821 | 4.2:+32668193 | MS.gene28989:CDS |
| TGTTAATAAGGATTCTGCAG+AGG | 0.649189 | 4.2:+32670282 | MS.gene28989:CDS |
| GCCGTACCTTCTTTCGACGG+CGG | 0.649661 | 4.2:+32667066 | MS.gene28989:CDS |
| GTGGAATGGAGAATGAAGAG+AGG | 0.659755 | 4.2:-32667036 | None:intergenic |
| TGAGAATATTCATACCACAT+CGG | 0.668109 | 4.2:-32668253 | None:intergenic |
| GACGGAGAAAGCAATGACGG+AGG | 0.670438 | 4.2:+32667153 | MS.gene28989:CDS |
| GATGGGTGGATTATGCACGT+TGG | 0.670645 | 4.2:+32670875 | MS.gene28989:intron |
| ACCACTTGGAGTCAGTGCAG+GGG | 0.698840 | 4.2:+32669009 | MS.gene28989:CDS |
| GATTCATTCGGAGGACACGG+TGG | 0.718521 | 4.2:+32667090 | MS.gene28989:CDS |
| AATGACGGAGGAAAGAGCGG+CGG | 0.719319 | 4.2:+32667165 | MS.gene28989:CDS |
| AATGACGGACATGGACACGG+AGG | 0.724089 | 4.2:+32667129 | MS.gene28989:CDS |
| TGAAGAGAGGATCTGTGCGG+TGG | 0.732308 | 4.2:-32667023 | None:intergenic |
| GCCGTCGAAAGAAGGTACGG+CGG | 0.734361 | 4.2:-32667064 | None:intergenic |
| GGTGGTCTAAGAGAAACCGT+AGG | 0.739590 | 4.2:-32668989 | None:intergenic |
| GAATGAAGAGAGGATCTGTG+CGG | 0.828823 | 4.2:-32667026 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATAATGATATAAATGAAT+TGG | + | chr4.2:32668616-32668635 | MS.gene28989:intron | 10.0% |
| !!! | ATAAAAAAAAACATTTTCTT+TGG | + | chr4.2:32668663-32668682 | MS.gene28989:intron | 10.0% |
| !! | AATATATGATATAGATACTT+TGG | - | chr4.2:32670103-32670122 | None:intergenic | 15.0% |
| !!! | AAATCTTTTATTGAAAGAAA+AGG | - | chr4.2:32670130-32670149 | None:intergenic | 15.0% |
| !!! | ATGTTTTTTAATTTGAATTG+AGG | + | chr4.2:32667576-32667595 | MS.gene28989:intron | 15.0% |
| !!! | TGTTTTTTAATTTGAATTGA+GGG | + | chr4.2:32667577-32667596 | MS.gene28989:intron | 15.0% |
| !!! | TTAATTTAATTTAGCTTCTA+TGG | + | chr4.2:32667464-32667483 | MS.gene28989:intron | 15.0% |
| !!! | TTATTTTTAATGTTTCTAGT+AGG | + | chr4.2:32669750-32669769 | MS.gene28989:intron | 15.0% |
| !! | ACTAATTGTTATACAAAATG+TGG | + | chr4.2:32669295-32669314 | MS.gene28989:intron | 20.0% |
| !! | CTGAATTAATTTAGTTGTAA+TGG | + | chr4.2:32667524-32667543 | MS.gene28989:intron | 20.0% |
| !!! | AAAACATTTTCTTTGGTATT+AGG | + | chr4.2:32668670-32668689 | MS.gene28989:intron | 20.0% |
| !!! | AAGAGTTATTTTTCTATTCA+TGG | + | chr4.2:32669802-32669821 | MS.gene28989:intron | 20.0% |
| !!! | ATCATATACCCATAATTTTA+AGG | - | chr4.2:32669684-32669703 | None:intergenic | 20.0% |
| !!! | CTCAAACATTTTTAATATGA+TGG | - | chr4.2:32670584-32670603 | None:intergenic | 20.0% |
| !!! | TTCATTGTTTTAAATGTAAG+TGG | + | chr4.2:32670168-32670187 | MS.gene28989:intron | 20.0% |
| !!! | TTTAGTTATATTGAGTGTTT+TGG | + | chr4.2:32668009-32668028 | MS.gene28989:intron | 20.0% |
| ! | AAACATGTCAAAAATAGTCT+GGG | - | chr4.2:32668435-32668454 | None:intergenic | 25.0% |
| ! | AGTTTGAATATGGTTATTGT+TGG | + | chr4.2:32667978-32667997 | MS.gene28989:intron | 25.0% |
| ! | ATATGAAATCATCTATCTAC+TGG | + | chr4.2:32670041-32670060 | MS.gene28989:intron | 25.0% |
| ! | CAATTGTGGTATGTATAATT+TGG | + | chr4.2:32669228-32669247 | MS.gene28989:intron | 25.0% |
| ! | CCTGTTAACCTTAAAATTAT+GGG | + | chr4.2:32669673-32669692 | MS.gene28989:intron | 25.0% |
| ! | GAATTTAAACACTATAAGTC+CGG | - | chr4.2:32669597-32669616 | None:intergenic | 25.0% |
| ! | GTTAACAGACATATGTATTA+AGG | - | chr4.2:32668826-32668845 | None:intergenic | 25.0% |
| ! | GTTTGAATATGGTTATTGTT+GGG | + | chr4.2:32667979-32667998 | MS.gene28989:intron | 25.0% |
| ! | TCATAAAACATGAGTTATAC+TGG | - | chr4.2:32670842-32670861 | None:intergenic | 25.0% |
| ! | TCCTGTTAACCTTAAAATTA+TGG | + | chr4.2:32669672-32669691 | MS.gene28989:intron | 25.0% |
| ! | TCTCATTTACCTTTAAATCA+TGG | + | chr4.2:32669559-32669578 | MS.gene28989:intron | 25.0% |
| !! | AGCATTAGTAGATTTTAGAT+TGG | - | chr4.2:32670424-32670443 | None:intergenic | 25.0% |
| !! | ATGAAAAACACTCTTTTGTT+TGG | + | chr4.2:32668728-32668747 | MS.gene28989:intron | 25.0% |
| !! | TATATGTTGATTGACAATCT+GGG | + | chr4.2:32668143-32668162 | MS.gene28989:intron | 25.0% |
| !! | TCTAAAATCTACTAATGCTT+CGG | + | chr4.2:32670425-32670444 | MS.gene28989:intron | 25.0% |
| !! | TTATATGTTGATTGACAATC+TGG | + | chr4.2:32668142-32668161 | MS.gene28989:intron | 25.0% |
| !!! | AAACAATTTTGACAACCTAA+TGG | + | chr4.2:32669122-32669141 | MS.gene28989:intron | 25.0% |
| !!! | GGATTCATTGTTTTAAATTG+CGG | + | chr4.2:32667598-32667617 | MS.gene28989:intron | 25.0% |
| !!! | TGAAAAACACTCTTTTGTTT+GGG | + | chr4.2:32668729-32668748 | MS.gene28989:intron | 25.0% |
| AAATGTAAGTGGAATCAACT+AGG | + | chr4.2:32670179-32670198 | MS.gene28989:intron | 30.0% | |
| AACATGTCAAAAATAGTCTG+GGG | - | chr4.2:32668434-32668453 | None:intergenic | 30.0% | |
| AACCATGTGAAAGTAAGATA+TGG | - | chr4.2:32669092-32669111 | None:intergenic | 30.0% | |
| AAGAATACTACATTTCTCTG+TGG | + | chr4.2:32668754-32668773 | MS.gene28989:intron | 30.0% | |
| AATGGAATTAAAGCTTGACA+AGG | + | chr4.2:32667542-32667561 | MS.gene28989:intron | 30.0% | |
| ACCATGTGAAAGTAAGATAT+GGG | - | chr4.2:32669091-32669110 | None:intergenic | 30.0% | |
| AGAATGAGAAGAAAGAGAAT+GGG | - | chr4.2:32666908-32666927 | None:intergenic | 30.0% | |
| AGTTCTCATTTGCCTAATTA+TGG | + | chr4.2:32669379-32669398 | MS.gene28989:intron | 30.0% | |
| ATAGTGTAAGAATGAAACCT+TGG | - | chr4.2:32667433-32667452 | None:intergenic | 30.0% | |
| ATATGAAGCAGATTGAGATT+TGG | + | chr4.2:32667783-32667802 | MS.gene28989:intron | 30.0% | |
| ATGGTTAAGTTTAATTCAGC+TGG | + | chr4.2:32669868-32669887 | MS.gene28989:intron | 30.0% | |
| CAAAGATGAAAATGCTAACA+AGG | - | chr4.2:32668411-32668430 | None:intergenic | 30.0% | |
| CAATAATTCCAGAAAGAACT+TGG | - | chr4.2:32670666-32670685 | None:intergenic | 30.0% | |
| CAATGAATGCAAATAACACT+CGG | - | chr4.2:32670155-32670174 | None:intergenic | 30.0% | |
| CGTAAGTAAATACTACCATT+AGG | - | chr4.2:32669140-32669159 | None:intergenic | 30.0% | |
| GAAACATGTCAAAAATAGTC+TGG | - | chr4.2:32668436-32668455 | None:intergenic | 30.0% | |
| GAGTTGTATGATTATTGAGT+AGG | + | chr4.2:32668047-32668066 | MS.gene28989:intron | 30.0% | |
| GATTATTGAGTAGGAAGATT+GGG | + | chr4.2:32668056-32668075 | MS.gene28989:intron | 30.0% | |
| GGGATTGAATAGTTTGAATA+TGG | + | chr4.2:32667968-32667987 | MS.gene28989:intron | 30.0% | |
| GTAGTAACTATAACTAAGCA+AGG | - | chr4.2:32668308-32668327 | None:intergenic | 30.0% | |
| GTATTGTTGAAATTCTAGCA+TGG | + | chr4.2:32669720-32669739 | MS.gene28989:intron | 30.0% | |
| TACTACATGTTGTCTTATGA+CGG | + | chr4.2:32668322-32668341 | MS.gene28989:intron | 30.0% | |
| TATGAAGCAGATTGAGATTT+GGG | + | chr4.2:32667784-32667803 | MS.gene28989:intron | 30.0% | |
| TATTCTTTCTTGCAAAGAGT+TGG | + | chr4.2:32669203-32669222 | MS.gene28989:CDS | 30.0% | |
| TGAGAATATTCATACCACAT+CGG | - | chr4.2:32668256-32668275 | None:intergenic | 30.0% | |
| TGATTATTGAGTAGGAAGAT+TGG | + | chr4.2:32668055-32668074 | MS.gene28989:intron | 30.0% | |
| TGGTTAAGTTTAATTCAGCT+GGG | + | chr4.2:32669869-32669888 | MS.gene28989:intron | 30.0% | |
| TTAACCATACAACAAACTTG+TGG | - | chr4.2:32669856-32669875 | None:intergenic | 30.0% | |
| TTACCTTTAAATCATGGCTT+TGG | + | chr4.2:32669565-32669584 | MS.gene28989:intron | 30.0% | |
| ! | AAAAATCTGATTTGCCTGAT+AGG | + | chr4.2:32670638-32670657 | MS.gene28989:intron | 30.0% |
| ! | AATTATTGAACAGAGGCTTT+TGG | + | chr4.2:32670678-32670697 | MS.gene28989:CDS | 30.0% |
| ! | ATCTTTTATCACATCATGCA+TGG | + | chr4.2:32670543-32670562 | MS.gene28989:intron | 30.0% |
| ! | CACATTATTCTTTTTACCTG+AGG | - | chr4.2:32670375-32670394 | None:intergenic | 30.0% |
| ! | TGATGATCTTTTTCTTGCTA+AGG | + | chr4.2:32667377-32667396 | MS.gene28989:CDS | 30.0% |
| ! | TTTGCATTTTGCTTTCATTC+AGG | + | chr4.2:32670216-32670235 | MS.gene28989:intron | 30.0% |
| !! | ATAGTAGCATCAGAAGTATT+TGG | - | chr4.2:32668697-32668716 | None:intergenic | 30.0% |
| !! | ATTTTGCTTTCATTCAGGTT+GGG | + | chr4.2:32670221-32670240 | MS.gene28989:intron | 30.0% |
| !! | TTTCTGGAATTATTGAACAG+AGG | + | chr4.2:32670671-32670690 | MS.gene28989:CDS | 30.0% |
| !!! | ACCATTAGTGAGATTTTTTG+AGG | + | chr4.2:32670398-32670417 | MS.gene28989:intron | 30.0% |
| !!! | CCCATAATTTTAAGGTTAAC+AGG | - | chr4.2:32669676-32669695 | None:intergenic | 30.0% |
| !!! | GGAGAAATTGACAGTTTTTT+TGG | + | chr4.2:32668637-32668656 | MS.gene28989:intron | 30.0% |
| !!! | TTTTTTTCTTCGATTTCCTC+TGG | + | chr4.2:32668517-32668536 | MS.gene28989:intron | 30.0% |
| AAACGATAGCATGTACAAAG+TGG | - | chr4.2:32668851-32668870 | None:intergenic | 35.0% | |
| AAAGCCTAAATCTTGGTCAT+TGG | + | chr4.2:32669929-32669948 | MS.gene28989:intron | 35.0% | |
| AACTAAGCAAGGAAATTCAC+AGG | - | chr4.2:32668297-32668316 | None:intergenic | 35.0% | |
| ACAATGCAATAGGGATGTTA+TGG | - | chr4.2:32668918-32668937 | None:intergenic | 35.0% | |
| AGCCTTCTTTGCATTAATTG+CGG | - | chr4.2:32670263-32670282 | None:intergenic | 35.0% | |
| AGTTTATTTACCTGCACCTA+CGG | + | chr4.2:32668973-32668992 | MS.gene28989:CDS | 35.0% | |
| ATAAGAGTAATGTGAAGAGC+AGG | - | chr4.2:32669459-32669478 | None:intergenic | 35.0% | |
| ATATGGGATATATCAAGACC+TGG | - | chr4.2:32669075-32669094 | None:intergenic | 35.0% | |
| ATGAAGCAGATTGAGATTTG+GGG | + | chr4.2:32667785-32667804 | MS.gene28989:intron | 35.0% | |
| CAATGCAATAGGGATGTTAT+GGG | - | chr4.2:32668917-32668936 | None:intergenic | 35.0% | |
| CATCGAAAAATTTCTCTCTC+CGG | - | chr4.2:32668215-32668234 | None:intergenic | 35.0% | |
| CATTACTCTTATGAGCACTT+CGG | + | chr4.2:32669467-32669486 | MS.gene28989:intron | 35.0% | |
| CATTCTTAATTTCCTTCCAC+AGG | + | chr4.2:32669160-32669179 | MS.gene28989:intron | 35.0% | |
| CCACAGGAAACTAAAAAGAA+AGG | - | chr4.2:32669269-32669288 | None:intergenic | 35.0% | |
| CGTCTCAAGATTTGTATTGT+TGG | - | chr4.2:32669619-32669638 | None:intergenic | 35.0% | |
| CTGAAGAACAAGATAGTGAA+GGG | + | chr4.2:32670066-32670085 | MS.gene28989:intron | 35.0% | |
| GAACCAAAGCCATGATTTAA+AGG | - | chr4.2:32669571-32669590 | None:intergenic | 35.0% | |
| GACTACAATACATGTTTCAC+AGG | - | chr4.2:32668890-32668909 | None:intergenic | 35.0% | |
| GAGAATGAGAAGAAAGAGAA+TGG | - | chr4.2:32666909-32666928 | None:intergenic | 35.0% | |
| GCCTCAAAAAATCTCACTAA+TGG | - | chr4.2:32670402-32670421 | None:intergenic | 35.0% | |
| TAAGTTTAATTCAGCTGGGT+GGG | + | chr4.2:32669873-32669892 | MS.gene28989:intron | 35.0% | |
| TATCAAGGAAGGTAAGATTC+CGG | + | chr4.2:32667263-32667282 | MS.gene28989:CDS | 35.0% | |
| TCCCATATCTTACTTTCACA+TGG | + | chr4.2:32669087-32669106 | MS.gene28989:intron | 35.0% | |
| TCGACTAGAACTTGAGATAT+CGG | + | chr4.2:32668485-32668504 | MS.gene28989:intron | 35.0% | |
| TCTGAAGAACAAGATAGTGA+AGG | + | chr4.2:32670065-32670084 | MS.gene28989:intron | 35.0% | |
| TGCAAAGAAGGCTGTTAATA+AGG | + | chr4.2:32670270-32670289 | MS.gene28989:CDS | 35.0% | |
| TGTTAATAAGGATTCTGCAG+AGG | + | chr4.2:32670282-32670301 | MS.gene28989:CDS | 35.0% | |
| TTAAGTTTAATTCAGCTGGG+TGG | + | chr4.2:32669872-32669891 | MS.gene28989:intron | 35.0% | |
| ! | CATTTTGCTTTCATTCAGGT+TGG | + | chr4.2:32670220-32670239 | MS.gene28989:intron | 35.0% |
| ! | GATCTTTTTCTTGCTAAGGT+TGG | + | chr4.2:32667381-32667400 | MS.gene28989:CDS | 35.0% |
| ! | TGCTGCTTATGGTGTTTATA+TGG | + | chr4.2:32670336-32670355 | MS.gene28989:CDS | 35.0% |
| !! | ACTCTGCTTAACTTGTGTTT+CGG | - | chr4.2:32669505-32669524 | None:intergenic | 35.0% |
| !! | AGAGAAATTTTTCGATGAGC+TGG | + | chr4.2:32668218-32668237 | MS.gene28989:CDS | 35.0% |
| !! | AGCACAAGAGTACCATAATT+AGG | - | chr4.2:32669394-32669413 | None:intergenic | 35.0% |
| !! | GATGACGGAAAAAACAATGA+CGG | + | chr4.2:32667114-32667133 | MS.gene28989:CDS | 35.0% |
| !! | GTATTTGTTGTCACTTCTTC+TGG | + | chr4.2:32668549-32668568 | MS.gene28989:intron | 35.0% |
| !!! | CCTTTCTTTTTAGTTTCCTG+TGG | + | chr4.2:32669266-32669285 | MS.gene28989:intron | 35.0% |
| AAACTAAGACTCTGCTATGG+TGG | - | chr4.2:32667712-32667731 | None:intergenic | 40.0% | |
| AACAATTAGTCACTAGCCAC+AGG | - | chr4.2:32669285-32669304 | None:intergenic | 40.0% | |
| AAGACCTGGAATGCATTATC+TGG | - | chr4.2:32669061-32669080 | None:intergenic | 40.0% | |
| AGACCTGGAATGCATTATCT+GGG | - | chr4.2:32669060-32669079 | None:intergenic | 40.0% | |
| AGATCCAACTGCAAAAAGCT+TGG | - | chr4.2:32669344-32669363 | None:intergenic | 40.0% | |
| AGCAAACTAAGACTCTGCTA+TGG | - | chr4.2:32667715-32667734 | None:intergenic | 40.0% | |
| AGGGAAAGAAAAAGAAGGGA+GGG | - | chr4.2:32666947-32666966 | None:intergenic | 40.0% | |
| AGTAGGCTGTTTGAATGCTA+TGG | + | chr4.2:32669767-32669786 | MS.gene28989:intron | 40.0% | |
| AGTGGAGGGAAAGAAAAAGA+AGG | - | chr4.2:32666952-32666971 | None:intergenic | 40.0% | |
| ATAAACACCATAAGCAGCAC+TGG | - | chr4.2:32670335-32670354 | None:intergenic | 40.0% | |
| ATCCCTATTGCATTGTTCTC+AGG | + | chr4.2:32668922-32668941 | MS.gene28989:intron | 40.0% | |
| ATGCTTCGGTCAACTAATGT+TGG | + | chr4.2:32670439-32670458 | MS.gene28989:intron | 40.0% | |
| ATTGCATTGTTCTCAGGTCA+TGG | + | chr4.2:32668928-32668947 | MS.gene28989:intron | 40.0% | |
| CAAACTATTCAATCCCTCCA+TGG | - | chr4.2:32667964-32667983 | None:intergenic | 40.0% | |
| CAAATACGACATACAACCAG+AGG | - | chr4.2:32668536-32668555 | None:intergenic | 40.0% | |
| CAAGCCAATGACCAAGATTT+AGG | - | chr4.2:32669936-32669955 | None:intergenic | 40.0% | |
| CTACTGCATCAGCAATATTG+TGG | + | chr4.2:32667925-32667944 | MS.gene28989:intron | 40.0% | |
| GAAAAAGAAGGGAGGGATTT+AGG | - | chr4.2:32666940-32666959 | None:intergenic | 40.0% | |
| GAAAGAACTTGGTACCTATC+AGG | - | chr4.2:32670655-32670674 | None:intergenic | 40.0% | |
| GAAGAAAGAGAATGGGAAGA+AGG | - | chr4.2:32666901-32666920 | None:intergenic | 40.0% | |
| GACCTGAGAACAATGCAATA+GGG | - | chr4.2:32668927-32668946 | None:intergenic | 40.0% | |
| GATAGGTACCAAGTTCTTTC+TGG | + | chr4.2:32670655-32670674 | MS.gene28989:intron | 40.0% | |
| GCTAAGGTTGGATTTGAATG+CGG | + | chr4.2:32667393-32667412 | MS.gene28989:CDS | 40.0% | |
| GTAGGCTGTTTGAATGCTAT+GGG | + | chr4.2:32669768-32669787 | MS.gene28989:intron | 40.0% | |
| GTGGAGGGAAAGAAAAAGAA+GGG | - | chr4.2:32666951-32666970 | None:intergenic | 40.0% | |
| TATGGTACTCTTGTGCTTTG+TGG | + | chr4.2:32669397-32669416 | MS.gene28989:intron | 40.0% | |
| TGAACCCAAATACGTATTGC+CGG | - | chr4.2:32670761-32670780 | None:intergenic | 40.0% | |
| TGACCTGAGAACAATGCAAT+AGG | - | chr4.2:32668928-32668947 | None:intergenic | 40.0% | |
| TGCCGCAATTAATGCAAAGA+AGG | + | chr4.2:32670258-32670277 | MS.gene28989:CDS | 40.0% | |
| TGGATTATGCACGTTGGATA+GGG | + | chr4.2:32670881-32670900 | MS.gene28989:CDS | 40.0% | |
| TTGAGAAGTCTCCGTTTATG+CGG | + | chr4.2:32667313-32667332 | MS.gene28989:CDS | 40.0% | |
| TTGATACGGAAAGAAGGAGA+AGG | - | chr4.2:32667003-32667022 | None:intergenic | 40.0% | |
| ! | AGAGTCATGATTTTGCAGTG+GGG | + | chr4.2:32669520-32669539 | MS.gene28989:intron | 40.0% |
| ! | CAGAGTCATGATTTTGCAGT+GGG | + | chr4.2:32669519-32669538 | MS.gene28989:intron | 40.0% |
| ! | GTCTGTAGTTGAGAGGTTTT+TGG | + | chr4.2:32667287-32667306 | MS.gene28989:CDS | 40.0% |
| !! | AGCAGCACTGGTAGAAAATA+TGG | - | chr4.2:32670323-32670342 | None:intergenic | 40.0% |
| !! | CTCTCCACAAGTTTGTTGTA+TGG | + | chr4.2:32669849-32669868 | MS.gene28989:intron | 40.0% |
| !! | GCAGCACTGGTAGAAAATAT+GGG | - | chr4.2:32670322-32670341 | None:intergenic | 40.0% |
| !! | GGAAAAAACAATGACGGACA+TGG | + | chr4.2:32667120-32667139 | MS.gene28989:CDS | 40.0% |
| !!! | TTTTCTACCAGTGCTGCTTA+TGG | + | chr4.2:32670325-32670344 | MS.gene28989:CDS | 40.0% |
| AACACATGTACGACCACATC+AGG | - | chr4.2:32667875-32667894 | None:intergenic | 45.0% | |
| AGGCAACTTGAAACCATGGA+GGG | + | chr4.2:32667948-32667967 | MS.gene28989:intron | 45.0% | |
| AGTAGCATTGCACTGCAGTT+GGG | - | chr4.2:32667910-32667929 | None:intergenic | 45.0% | |
| ATCATACTCAGCAGCAGTCT+AGG | - | chr4.2:32668190-32668209 | None:intergenic | 45.0% | |
| ATGCATTATCTGGGCAGTTG+TGG | - | chr4.2:32669051-32669070 | None:intergenic | 45.0% | |
| CACTAAGTACAAGCTTGTGC+TGG | - | chr4.2:32670717-32670736 | None:intergenic | 45.0% | |
| CCCCAAAGAACATCAGTGTA+CGG | - | chr4.2:32668369-32668388 | None:intergenic | 45.0% | |
| CCGTACACTGATGTTCTTTG+GGG | + | chr4.2:32668366-32668385 | MS.gene28989:intron | 45.0% | |
| CGAACCGGCAATACGTATTT+GGG | + | chr4.2:32670754-32670773 | MS.gene28989:CDS | 45.0% | |
| CTGCATCAGCAATATTGTGG+AGG | + | chr4.2:32667928-32667947 | MS.gene28989:intron | 45.0% | |
| GAAAGAGAATGGGAAGAAGG+AGG | - | chr4.2:32666898-32666917 | None:intergenic | 45.0% | |
| GAATGAAGAGAGGATCTGTG+CGG | - | chr4.2:32667029-32667048 | None:intergenic | 45.0% | |
| GAGAAGGAGAAGGAGTGATA+CGG | - | chr4.2:32666987-32667006 | None:intergenic | 45.0% | |
| GAGGGAAAGAAAAAGAAGGG+AGG | - | chr4.2:32666948-32666967 | None:intergenic | 45.0% | |
| GCACTGCATCATAGACAAAC+TGG | - | chr4.2:32669909-32669928 | None:intergenic | 45.0% | |
| GCAGTGCAAAGCCTAAATCT+TGG | + | chr4.2:32669922-32669941 | MS.gene28989:intron | 45.0% | |
| GCCGTACACTGATGTTCTTT+GGG | + | chr4.2:32668365-32668384 | MS.gene28989:intron | 45.0% | |
| GGATTATGCACGTTGGATAG+GGG | + | chr4.2:32670882-32670901 | MS.gene28989:CDS | 45.0% | |
| GTCTATTGCGTTTCCTGATG+TGG | + | chr4.2:32667859-32667878 | MS.gene28989:intron | 45.0% | |
| GTGGAATGGAGAATGAAGAG+AGG | - | chr4.2:32667039-32667058 | None:intergenic | 45.0% | |
| GTTACCTTGCACAGCGTAAT+GGG | + | chr4.2:32669317-32669336 | MS.gene28989:intron | 45.0% | |
| GTTTCTCTTAGACCACCACT+TGG | + | chr4.2:32668995-32669014 | MS.gene28989:CDS | 45.0% | |
| TCATACTCAGCAGCAGTCTA+GGG | - | chr4.2:32668189-32668208 | None:intergenic | 45.0% | |
| TCGAACCGGCAATACGTATT+TGG | + | chr4.2:32670753-32670772 | MS.gene28989:CDS | 45.0% | |
| TGAAGCAACCACCGCATAAA+CGG | - | chr4.2:32667327-32667346 | None:intergenic | 45.0% | |
| TGACTTAGCTTCGGCTATCA+AGG | + | chr4.2:32667248-32667267 | MS.gene28989:CDS | 45.0% | |
| TGCCGTACACTGATGTTCTT+TGG | + | chr4.2:32668364-32668383 | MS.gene28989:intron | 45.0% | |
| TTAGCTTCGGCTATCAAGGA+AGG | + | chr4.2:32667252-32667271 | MS.gene28989:CDS | 45.0% | |
| ! | GCAGAGTCATGATTTTGCAG+TGG | + | chr4.2:32669518-32669537 | MS.gene28989:intron | 45.0% |
| ! | GTGGATTATGCACGTTGGAT+AGG | + | chr4.2:32670880-32670899 | MS.gene28989:CDS | 45.0% |
| !! | AACAATGACGGACATGGACA+CGG | + | chr4.2:32667126-32667145 | MS.gene28989:CDS | 45.0% |
| !! | ATCATGGCTTTGGTTCTAGC+CGG | + | chr4.2:32669575-32669594 | MS.gene28989:intron | 45.0% |
| !! | CTTTGCTTTGCTGTTCGAAC+CGG | + | chr4.2:32670739-32670758 | MS.gene28989:CDS | 45.0% |
| !! | GAATGAGGCGTTGTTGTTGT+TGG | + | chr4.2:32667191-32667210 | MS.gene28989:CDS | 45.0% |
| !! | GCAAAGAGTTGGTGCAATTG+TGG | + | chr4.2:32669214-32669233 | MS.gene28989:CDS | 45.0% |
| !!! | TATTTTTTATTTTTTACTTT+TGG | + | chr4.2:32670489-32670508 | MS.gene28989:intron | 5.0% |
| AACCTCTCAACTACAGACGC+CGG | - | chr4.2:32667285-32667304 | None:intergenic | 50.0% | |
| AGAAGGGAGGGATTTAGGAG+TGG | - | chr4.2:32666935-32666954 | None:intergenic | 50.0% | |
| AGAAGTCTCCGTTTATGCGG+TGG | + | chr4.2:32667316-32667335 | MS.gene28989:CDS | 50.0% | |
| AGTTGGATCTGCTTCGTCAC+TGG | + | chr4.2:32669354-32669373 | MS.gene28989:CDS | 50.0% | |
| ATACTCAGCAGCAGTCTAGG+GGG | - | chr4.2:32668187-32668206 | None:intergenic | 50.0% | |
| ATAGCCGAAGCTAAGTCAGC+CGG | - | chr4.2:32667246-32667265 | None:intergenic | 50.0% | |
| ATGCGGTGGTTGCTTCAGTT+TGG | + | chr4.2:32667330-32667349 | MS.gene28989:CDS | 50.0% | |
| ATGGGAAGAAGGAGGAACGA+AGG | - | chr4.2:32666890-32666909 | None:intergenic | 50.0% | |
| CAGTAGCATTGCACTGCAGT+TGG | - | chr4.2:32667911-32667930 | None:intergenic | 50.0% | |
| CATACTCAGCAGCAGTCTAG+GGG | - | chr4.2:32668188-32668207 | None:intergenic | 50.0% | |
| CGGAAAGAAGGAGAAGGAGA+AGG | - | chr4.2:32666997-32667016 | None:intergenic | 50.0% | |
| CTAAGAGAAACCGTAGGTGC+AGG | - | chr4.2:32668986-32669005 | None:intergenic | 50.0% | |
| CTGCCCAGATAATGCATTCC+AGG | + | chr4.2:32669054-32669073 | MS.gene28989:CDS | 50.0% | |
| GAGAAGGAGTGATACGGAGA+CGG | - | chr4.2:32666981-32667000 | None:intergenic | 50.0% | |
| GAGGCAACTTGAAACCATGG+AGG | + | chr4.2:32667947-32667966 | MS.gene28989:intron | 50.0% | |
| GGAAATTGTGTTCGCCGATG+TGG | + | chr4.2:32668239-32668258 | MS.gene28989:CDS | 50.0% | |
| GGAGACGGAGAAAGCAATGA+CGG | + | chr4.2:32667150-32667169 | MS.gene28989:CDS | 50.0% | |
| GGAGATTCATTCGGAGGACA+CGG | + | chr4.2:32667087-32667106 | MS.gene28989:CDS | 50.0% | |
| GGTGGTCTAAGAGAAACCGT+AGG | - | chr4.2:32668992-32669011 | None:intergenic | 50.0% | |
| GGTTACCTTGCACAGCGTAA+TGG | + | chr4.2:32669316-32669335 | MS.gene28989:intron | 50.0% | |
| GTAGCATTGCACTGCAGTTG+GGG | - | chr4.2:32667909-32667928 | None:intergenic | 50.0% | |
| GTGGAGGCAACTTGAAACCA+TGG | + | chr4.2:32667944-32667963 | MS.gene28989:intron | 50.0% | |
| GTTGGATTTGAATGCGGCGT+CGG | + | chr4.2:32667399-32667418 | MS.gene28989:CDS | 50.0% | |
| TTCGACGGCGGAGATTCATT+CGG | + | chr4.2:32667078-32667097 | MS.gene28989:CDS | 50.0% | |
| ! | AGCAATGACGGAGGAAAGAG+CGG | + | chr4.2:32667162-32667181 | MS.gene28989:CDS | 50.0% |
| ! | AGCTTGTGCTGGTGCAACAA+AGG | - | chr4.2:32670706-32670725 | None:intergenic | 50.0% |
| ! | CGGTGGTTGATACGGAAAGA+AGG | - | chr4.2:32667009-32667028 | None:intergenic | 50.0% |
| ! | GAAAGAAGGTACGGCGGAAT+CGG | - | chr4.2:32667061-32667080 | None:intergenic | 50.0% |
| ! | GATCTGTGCGGTGGTTGATA+CGG | - | chr4.2:32667017-32667036 | None:intergenic | 50.0% |
| ! | GGGTCCAAGCTTTTTGCAGT+TGG | + | chr4.2:32669337-32669356 | MS.gene28989:CDS | 50.0% |
| ! | GGTTGATGCGAAGCACATTG+TGG | + | chr4.2:32667619-32667638 | MS.gene28989:intron | 50.0% |
| ! | GTTGTTGTTGTTGGCGCAAG+CGG | + | chr4.2:32667200-32667219 | MS.gene28989:CDS | 50.0% |
| ! | TTGTTGTTGTTGGCGCAAGC+GGG | + | chr4.2:32667201-32667220 | MS.gene28989:CDS | 50.0% |
| !! | AAAGAGCGGCGGATTGAATG+AGG | + | chr4.2:32667176-32667195 | MS.gene28989:CDS | 50.0% |
| !! | GATGGGTGGATTATGCACGT+TGG | + | chr4.2:32670875-32670894 | MS.gene28989:intron | 50.0% |
| !! | TGGCAGTTTCTAGCAACCTC+AGG | + | chr4.2:32670356-32670375 | MS.gene28989:CDS | 50.0% |
| AAGGAGTGATACGGAGACGG+AGG | - | chr4.2:32666978-32666997 | None:intergenic | 55.0% | |
| ACCACTTGGAGTCAGTGCAG+GGG | + | chr4.2:32669009-32669028 | MS.gene28989:CDS | 55.0% | |
| AGGAGTGATACGGAGACGGA+GGG | - | chr4.2:32666977-32666996 | None:intergenic | 55.0% | |
| ATACGGAGACGGAGGGAAAG+TGG | - | chr4.2:32666970-32666989 | None:intergenic | 55.0% | |
| CACCACTTGGAGTCAGTGCA+GGG | + | chr4.2:32669008-32669027 | MS.gene28989:CDS | 55.0% | |
| CAGAGAGAGCAACCTGTGGA+AGG | - | chr4.2:32669175-32669194 | None:intergenic | 55.0% | |
| CGGTGGTTGCTTCAGTTTGG+TGG | + | chr4.2:32667333-32667352 | MS.gene28989:CDS | 55.0% | |
| CTGCTGCTGAGTATGATCGC+CGG | + | chr4.2:32668193-32668212 | MS.gene28989:CDS | 55.0% | |
| CTTCCACAGGTTGCTCTCTC+TGG | + | chr4.2:32669173-32669192 | MS.gene28989:intron | 55.0% | |
| GAATCTCCGCCGTCGAAAGA+AGG | - | chr4.2:32667075-32667094 | None:intergenic | 55.0% | |
| GACGGAGAAAGCAATGACGG+AGG | + | chr4.2:32667153-32667172 | MS.gene28989:CDS | 55.0% | |
| GATCCAGAGAGAGCAACCTG+TGG | - | chr4.2:32669179-32669198 | None:intergenic | 55.0% | |
| GATTCATTCGGAGGACACGG+TGG | + | chr4.2:32667090-32667109 | MS.gene28989:CDS | 55.0% | |
| GGGAGGGATTTAGGAGTGGA+AGG | - | chr4.2:32666931-32666950 | None:intergenic | 55.0% | |
| TCCGCCGTACCTTCTTTCGA+CGG | + | chr4.2:32667063-32667082 | MS.gene28989:CDS | 55.0% | |
| TCCGCCGTCGAAAGAAGGTA+CGG | - | chr4.2:32667070-32667089 | None:intergenic | 55.0% | |
| TGAAGAGAGGATCTGTGCGG+TGG | - | chr4.2:32667026-32667045 | None:intergenic | 55.0% | |
| TGGACCCATTACGCTGTGCA+AGG | - | chr4.2:32669324-32669343 | None:intergenic | 55.0% | |
| TTCCGGCGTCTGTAGTTGAG+AGG | + | chr4.2:32667280-32667299 | MS.gene28989:CDS | 55.0% | |
| ! | AATGACGGAGGAAAGAGCGG+CGG | + | chr4.2:32667165-32667184 | MS.gene28989:CDS | 55.0% |
| ! | TGTTGTTGTTGGCGCAAGCG+GGG | + | chr4.2:32667202-32667221 | MS.gene28989:CDS | 55.0% |
| !! | AATGACGGACATGGACACGG+AGG | + | chr4.2:32667129-32667148 | MS.gene28989:CDS | 55.0% |
| !! | TGTGCCGGCTGACTTAGCTT+CGG | + | chr4.2:32667239-32667258 | MS.gene28989:CDS | 55.0% |
| CCACCACTTGGAGTCAGTGC+AGG | + | chr4.2:32669007-32669026 | MS.gene28989:CDS | 60.0% | |
| GACGGCGGAGATTCATTCGG+AGG | + | chr4.2:32667081-32667100 | MS.gene28989:CDS | 60.0% | |
| GCCGTACCTTCTTTCGACGG+CGG | + | chr4.2:32667066-32667085 | MS.gene28989:CDS | 60.0% | |
| GGACATGGACACGGAGGAGA+CGG | + | chr4.2:32667135-32667154 | MS.gene28989:CDS | 60.0% | |
| GGAGACGGAGGGAAAGTGGA+GGG | - | chr4.2:32666966-32666985 | None:intergenic | 60.0% | |
| GGAGGACACGGTGGAGATGA+CGG | + | chr4.2:32667099-32667118 | MS.gene28989:CDS | 60.0% | |
| GTACGGCGGAATCGGTGGAA+TGG | - | chr4.2:32667053-32667072 | None:intergenic | 60.0% | |
| ! | AGAAGGTACGGCGGAATCGG+TGG | - | chr4.2:32667058-32667077 | None:intergenic | 60.0% |
| ! | GAGGTCGTTGGAGAGTGTGC+CGG | + | chr4.2:32667224-32667243 | MS.gene28989:CDS | 60.0% |
| ! | GCCGTCGAAAGAAGGTACGG+CGG | - | chr4.2:32667067-32667086 | None:intergenic | 60.0% |
| !! | CCTGCACTGACTCCAAGTGG+TGG | - | chr4.2:32669010-32669029 | None:intergenic | 60.0% |
| CGGAGACGGAGGGAAAGTGG+AGG | - | chr4.2:32666967-32666986 | None:intergenic | 65.0% | |
| TGTTGTTGGCGCAAGCGGGG+AGG | + | chr4.2:32667205-32667224 | MS.gene28989:CDS | 65.0% | |
| !! | GCCCCTGCACTGACTCCAAG+TGG | - | chr4.2:32669013-32669032 | None:intergenic | 65.0% |
| !!! | CGGCGTCGGCGTTTTCACCA+AGG | + | chr4.2:32667413-32667432 | MS.gene28989:CDS | 65.0% |
| GGCGCAAGCGGGGAGGTCGT+TGG | + | chr4.2:32667212-32667231 | MS.gene28989:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 32666868 | 32670912 | 32666868 | ID=MS.gene28989 |
| chr4.2 | mRNA | 32666868 | 32670912 | 32666868 | ID=MS.gene28989.t1;Parent=MS.gene28989 |
| chr4.2 | exon | 32666868 | 32667434 | 32666868 | ID=MS.gene28989.t1.exon1;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32666868 | 32667434 | 32666868 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| chr4.2 | exon | 32668192 | 32668260 | 32668192 | ID=MS.gene28989.t1.exon2;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32668192 | 32668260 | 32668192 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| chr4.2 | exon | 32668944 | 32669075 | 32668944 | ID=MS.gene28989.t1.exon3;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32668944 | 32669075 | 32668944 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| chr4.2 | exon | 32669182 | 32669235 | 32669182 | ID=MS.gene28989.t1.exon4;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32669182 | 32669235 | 32669182 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| chr4.2 | exon | 32669331 | 32669375 | 32669331 | ID=MS.gene28989.t1.exon5;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32669331 | 32669375 | 32669331 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| chr4.2 | exon | 32670238 | 32670377 | 32670238 | ID=MS.gene28989.t1.exon6;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32670238 | 32670377 | 32670238 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| chr4.2 | exon | 32670660 | 32670785 | 32670660 | ID=MS.gene28989.t1.exon7;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32670660 | 32670785 | 32670660 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| chr4.2 | exon | 32670876 | 32670912 | 32670876 | ID=MS.gene28989.t1.exon8;Parent=MS.gene28989.t1 |
| chr4.2 | CDS | 32670876 | 32670912 | 32670876 | ID=cds.MS.gene28989.t1;Parent=MS.gene28989.t1 |
| Gene Sequence |
| Protein sequence |
