AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29313

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29313.t1 MTR_7g113860 97.927 386 8 0 1 386 1 386 0.0 784
MS.gene29313.t1 MTR_7g113860 92.329 365 26 2 23 386 17 380 0.0 690
MS.gene29313.t1 MTR_7g113860 98.033 305 6 0 82 386 8 312 0.0 621
MS.gene29313.t1 MTR_1g082390 75.956 366 85 2 11 375 7 370 0.0 574
MS.gene29313.t1 MTR_8g089805 45.968 372 191 7 10 375 15 382 3.00e-108 323
MS.gene29313.t1 MTR_1g030340 45.745 376 187 9 14 378 16 385 5.76e-108 322
MS.gene29313.t1 MTR_1g030220 45.187 374 194 7 10 378 15 382 7.29e-106 317
MS.gene29313.t1 MTR_7g087190 43.583 374 196 8 16 378 20 389 1.05e-103 311
MS.gene29313.t1 MTR_7g111780 45.977 348 163 7 35 380 36 360 1.40e-102 308
MS.gene29313.t1 MTR_1g082410 45.780 391 105 9 11 380 6 310 9.56e-98 293
MS.gene29313.t1 MTR_1g030230 44.324 370 191 10 11 373 8 369 3.88e-97 295
MS.gene29313.t1 MTR_1g030275 44.086 372 191 10 11 375 15 376 4.88e-96 292
MS.gene29313.t1 MTR_7g033165 42.061 359 193 9 22 372 19 370 7.03e-95 289
MS.gene29313.t1 MTR_6g007090 41.775 383 196 8 9 375 2 373 4.96e-94 286
MS.gene29313.t1 MTR_1g030268 45.869 351 173 10 32 375 37 377 8.86e-93 283
MS.gene29313.t1 MTR_7g033155 39.896 386 205 7 8 372 11 390 7.95e-90 276
MS.gene29313.t1 MTR_7g033150 39.305 374 205 8 16 373 10 377 8.92e-87 268
MS.gene29313.t1 MTR_8g089805 45.763 295 151 6 87 375 23 314 1.39e-84 260
MS.gene29313.t1 MTR_8g038680 38.947 380 205 10 9 375 2 367 5.53e-84 260
MS.gene29313.t1 MTR_6g007095 41.039 385 194 10 9 373 2 373 2.27e-83 268
MS.gene29313.t1 MTR_6g007095 40.312 320 161 7 59 372 393 688 1.12e-65 221
MS.gene29313.t1 MTR_7g116870 37.566 378 223 6 1 374 1 369 3.19e-82 256
MS.gene29313.t1 MTR_7g111780 45.161 279 128 8 104 380 6 261 2.10e-79 245
MS.gene29313.t1 MTR_6g007100 39.785 372 198 10 9 373 2 354 3.58e-77 243
MS.gene29313.t1 MTR_8g028160 39.266 354 194 8 32 374 33 376 2.02e-76 241
MS.gene29313.t1 MTR_1g030265 44.746 295 151 8 85 373 54 342 5.50e-74 234
MS.gene29313.t1 MTR_7g033165 41.754 285 155 7 22 298 19 300 8.96e-70 222
MS.gene29313.t1 MTR_8g012540 37.752 347 195 9 9 345 2 337 6.87e-67 216
MS.gene29313.t1 MTR_1g030268 43.431 274 141 9 32 298 37 303 5.12e-62 202
MS.gene29313.t1 MTR_4g104240 31.694 366 211 10 33 385 37 376 2.36e-48 168
MS.gene29313.t1 MTR_2g043980 32.461 382 204 13 9 373 8 352 9.34e-48 166
MS.gene29313.t1 MTR_2g015590 31.044 364 206 10 33 375 29 368 1.85e-47 166
MS.gene29313.t1 MTR_2g015670 31.755 359 211 12 25 375 21 353 2.89e-46 162
MS.gene29313.t1 MTR_2g015650 30.130 385 233 10 6 374 2 366 6.39e-46 162
MS.gene29313.t1 MTR_2g079090 30.548 383 212 11 9 372 2 349 2.25e-45 160
MS.gene29313.t1 MTR_3g463930 32.143 364 215 13 26 372 37 385 9.54e-45 159
MS.gene29313.t1 MTR_3g069780 31.165 369 206 15 25 372 20 361 1.20e-44 158
MS.gene29313.t1 MTR_3g463960 31.593 364 210 13 26 372 37 378 1.80e-44 158
MS.gene29313.t1 MTR_3g463950 31.593 364 210 13 26 372 37 378 1.80e-44 158
MS.gene29313.t1 MTR_3g463970 31.593 364 210 13 26 372 37 378 1.80e-44 158
MS.gene29313.t1 MTR_3g463940 31.593 364 210 13 26 372 37 378 1.80e-44 158
MS.gene29313.t1 MTR_3g438030 31.165 369 206 15 25 372 20 361 2.05e-44 157
MS.gene29313.t1 MTR_2g079080 30.548 383 212 11 9 372 2 349 2.26e-44 157
MS.gene29313.t1 MTR_0029s0050 30.548 383 212 11 9 372 2 349 8.43e-44 155
MS.gene29313.t1 MTR_2g015580 31.025 361 213 12 32 376 44 384 1.08e-43 156
MS.gene29313.t1 MTR_0029s0100 30.548 383 212 11 9 372 2 349 2.35e-43 154
MS.gene29313.t1 MTR_2g015630 29.114 395 233 13 3 376 2 370 9.69e-43 154
MS.gene29313.t1 MTR_3g448360 30.848 389 215 15 9 372 2 361 9.50e-42 150
MS.gene29313.t1 MTR_2g033930 29.333 375 225 12 8 371 6 351 2.28e-38 141
MS.gene29313.t1 MTR_3g069520 30.623 369 206 15 25 372 20 359 4.99e-38 140
MS.gene29313.t1 MTR_4g122200 28.610 367 223 11 17 371 17 356 4.73e-34 130
MS.gene29313.t1 MTR_8g014910 29.708 377 222 14 1 365 2 347 2.70e-32 125
MS.gene29313.t1 MTR_2g044100 28.457 376 228 13 11 370 14 364 3.11e-32 125
MS.gene29313.t1 MTR_3g098270 30.659 349 201 12 33 367 32 353 1.85e-31 123
MS.gene29313.t1 MTR_5g009100 27.457 346 211 12 37 370 48 365 3.63e-30 119
MS.gene29313.t1 MTR_5g022630 26.984 378 234 14 10 371 14 365 4.73e-30 119
MS.gene29313.t1 MTR_2g033920 27.704 379 209 12 18 371 18 356 1.00e-29 118
MS.gene29313.t1 MTR_3g114090 27.500 360 220 12 11 356 9 341 1.37e-29 117
MS.gene29313.t1 MTR_8g079050 28.133 391 221 15 9 372 10 367 2.05e-29 117
MS.gene29313.t1 MTR_5g084750 27.596 366 222 14 11 365 11 344 3.25e-29 116
MS.gene29313.t1 MTR_8g031390 28.161 348 220 11 35 377 37 359 3.51e-29 117
MS.gene29313.t1 MTR_1g025700 29.155 367 219 14 11 365 26 363 4.78e-29 116
MS.gene29313.t1 MTR_3g114120 28.986 345 204 12 33 365 45 360 7.80e-29 115
MS.gene29313.t1 MTR_8g022790 29.310 348 192 11 35 367 37 345 8.00e-29 115
MS.gene29313.t1 MTR_3g082830 27.246 345 209 12 34 365 37 352 8.58e-29 115
MS.gene29313.t1 MTR_1g025780 27.297 370 223 15 12 365 14 353 1.42e-28 115
MS.gene29313.t1 MTR_8g022810 29.275 345 203 13 35 366 41 357 2.84e-28 114
MS.gene29313.t1 MTR_2g015080 27.688 372 224 13 12 363 15 361 2.97e-28 114
MS.gene29313.t1 MTR_8g075220 28.090 356 213 13 32 371 37 365 5.27e-28 113
MS.gene29313.t1 MTR_4g056160 26.374 364 214 13 34 381 26 351 6.35e-28 112
MS.gene29313.t1 MTR_2g100620 28.736 348 203 14 34 366 30 347 8.94e-28 112
MS.gene29313.t1 MTR_5g074270 29.870 385 191 16 11 362 8 346 9.54e-28 112
MS.gene29313.t1 MTR_8g075200 28.612 353 210 14 32 371 38 361 1.00e-27 113
MS.gene29313.t1 MTR_2g015590 29.371 286 167 7 33 298 29 299 1.13e-27 112
MS.gene29313.t1 MTR_7g116570 28.451 355 206 13 35 372 34 357 1.45e-27 112
MS.gene29313.t1 MTR_8g031430 27.988 343 207 14 35 367 37 349 2.68e-27 111
MS.gene29313.t1 MTR_1g025720 26.531 343 211 12 32 362 34 347 2.74e-27 111
MS.gene29313.t1 MTR_3g464730 26.685 371 225 12 11 365 4 343 2.80e-27 111
MS.gene29313.t1 MTR_8g031420 27.059 340 220 10 35 370 35 350 2.84e-27 111
MS.gene29313.t1 MTR_1g025680 26.346 353 214 13 34 371 33 354 4.22e-27 112
MS.gene29313.t1 MTR_1g025760 26.016 369 232 13 12 365 52 394 2.85e-26 109
MS.gene29313.t1 MTR_3g435540 27.078 373 214 15 10 365 6 337 3.42e-26 108
MS.gene29313.t1 MTR_5g084770 26.648 364 230 11 13 365 6 343 3.85e-26 108
MS.gene29313.t1 MTR_7g116520 28.000 375 217 14 9 367 13 350 2.30e-25 106
MS.gene29313.t1 MTR_2g043990 30.303 297 156 10 9 290 70 330 2.40e-25 105
MS.gene29313.t1 MTR_8g075230 27.479 353 210 14 34 371 35 356 2.42e-25 105
MS.gene29313.t1 MTR_8g087890 26.359 368 220 12 34 384 30 363 4.92e-25 105
MS.gene29313.t1 MTR_2g084585 28.080 349 211 14 34 370 29 349 8.42e-25 104
MS.gene29313.t1 MTR_5g084790 24.668 377 230 13 8 365 5 346 1.82e-24 103
MS.gene29313.t1 MTR_1g025910 30.255 314 185 13 59 365 62 348 2.15e-24 103
MS.gene29313.t1 MTR_4g087985 26.415 371 227 17 11 363 15 357 6.57e-24 102
MS.gene29313.t1 MTR_0565s0010 25.323 387 235 13 9 380 10 357 1.41e-23 100
MS.gene29313.t1 MTR_8g031400 25.937 347 215 12 35 370 37 352 1.98e-23 100
MS.gene29313.t1 MTR_3g052490 26.479 355 217 10 34 372 31 357 2.36e-23 100
MS.gene29313.t1 MTR_0009s0250 27.401 354 212 14 34 378 32 349 1.35e-22 98.2
MS.gene29313.t1 MTR_4g108690 27.273 341 208 12 37 365 29 341 1.55e-22 98.2
MS.gene29313.t1 MTR_5g078210 26.613 372 218 14 14 366 3 338 2.13e-22 97.4
MS.gene29313.t1 MTR_8g031390 27.985 268 172 8 59 326 65 311 3.89e-22 96.3
MS.gene29313.t1 MTR_8g074570 26.842 380 225 13 8 367 10 356 6.81e-22 96.3
MS.gene29313.t1 MTR_5g022640 26.496 351 217 13 34 371 42 364 1.04e-21 95.9
MS.gene29313.t1 MTR_7g008060 24.870 386 233 14 1 372 1 343 1.14e-21 95.5
MS.gene29313.t1 MTR_3g052580 24.930 357 219 12 34 372 27 352 1.93e-21 95.1
MS.gene29313.t1 MTR_4g056280 27.222 360 222 11 18 365 13 344 1.99e-21 94.7
MS.gene29313.t1 MTR_3g052480 25.419 358 218 12 34 372 32 359 2.14e-21 94.7
MS.gene29313.t1 MTR_3g052580 24.930 357 219 12 34 372 26 351 3.54e-21 94.7
MS.gene29313.t1 MTR_3g005660 26.705 352 220 12 34 372 35 361 1.61e-20 92.4
MS.gene29313.t1 MTR_5g093090 25.770 357 217 11 34 372 27 353 1.62e-20 92.4
MS.gene29313.t1 MTR_4g035353 23.243 370 249 10 11 371 8 351 1.68e-20 92.0
MS.gene29313.t1 MTR_3g024510 23.483 379 249 9 10 380 17 362 3.50e-20 91.3
MS.gene29313.t1 MTR_7g116500 24.352 386 241 14 6 372 3 356 6.83e-20 90.5
MS.gene29313.t1 MTR_1g079530 25.995 377 219 15 13 367 1 339 8.65e-20 90.1
MS.gene29313.t1 MTR_3g023220 27.566 341 186 13 34 358 32 327 3.34e-19 88.2
MS.gene29313.t1 MTR_2g033920 27.451 306 169 10 18 298 18 295 5.69e-19 87.0
MS.gene29313.t1 MTR_4g019880 24.607 382 235 13 6 367 2 350 6.51e-19 87.8
MS.gene29313.t1 MTR_7g116510 25.815 368 228 12 16 368 6 343 6.85e-19 87.4
MS.gene29313.t1 MTR_3g005650 26.377 345 217 8 32 368 27 342 1.03e-18 87.0
MS.gene29313.t1 MTR_1g024890 25.434 346 216 11 35 367 32 348 1.27e-18 86.7
MS.gene29313.t1 MTR_5g083040 26.488 336 206 13 34 354 31 340 4.47e-18 85.1
MS.gene29313.t1 MTR_6g021530 25.532 329 200 11 59 372 55 353 9.75e-18 84.3
MS.gene29313.t1 MTR_2g461580 22.487 378 241 10 10 375 6 343 1.87e-17 83.2
MS.gene29313.t1 MTR_8g012520 34.532 139 55 3 169 306 8 111 3.13e-17 78.2
MS.gene29313.t1 MTR_2g058390 54.688 64 26 2 165 226 7 69 1.21e-16 74.3
MS.gene29313.t1 MTR_8g022810 32.386 176 99 6 60 228 70 232 2.78e-16 79.3
MS.gene29313.t1 MTR_5g078210 27.333 300 179 11 17 298 6 284 2.86e-15 76.6
MS.gene29313.t1 MTR_5g074210 30.625 160 86 4 207 362 64 202 2.93e-15 74.7
MS.gene29313.t1 MTR_2g017925 24.927 341 203 13 34 361 32 332 1.10e-14 75.1
MS.gene29313.t1 MTR_2g017955 21.038 366 242 9 11 364 9 339 3.66e-14 73.6
MS.gene29313.t1 MTR_8g074560 25.131 382 227 16 10 368 8 353 5.98e-14 72.8
MS.gene29313.t1 MTR_2g017875 24.784 347 200 14 34 361 33 337 3.89e-13 70.5
MS.gene29313.t1 MTR_5g093090 25.806 279 178 8 34 298 27 290 1.62e-12 68.2
MS.gene29313.t1 MTR_1108s0010 28.395 162 99 3 209 370 64 208 4.99e-12 65.5
MS.gene29313.t1 MTR_5g087690 23.796 353 225 14 33 376 48 365 1.35e-11 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29313.t1 AT1G54790 72.507 371 102 0 16 386 12 382 0.0 593
MS.gene29313.t1 AT1G54790 67.758 397 102 1 16 386 12 408 0.0 578
MS.gene29313.t1 AT1G54790 71.240 379 107 2 9 386 6 383 0.0 577
MS.gene29313.t1 AT3G05180 65.396 341 116 2 32 371 33 372 1.95e-163 463
MS.gene29313.t1 AT1G09390 48.246 342 159 6 34 373 36 361 3.82e-108 322
MS.gene29313.t1 AT1G56670 47.801 341 162 6 34 373 39 364 2.88e-107 320
MS.gene29313.t1 AT3G26430 43.467 375 200 8 11 377 5 375 8.40e-101 304
MS.gene29313.t1 AT3G62280 45.161 341 167 6 34 372 35 357 7.64e-98 296
MS.gene29313.t1 AT5G14450 40.483 373 210 7 7 373 13 379 4.80e-96 292
MS.gene29313.t1 AT1G67830 42.105 342 188 7 32 367 27 364 1.37e-94 288
MS.gene29313.t1 AT3G27950 44.355 372 186 7 10 374 7 364 7.20e-90 276
MS.gene29313.t1 AT4G01130 38.583 381 220 7 1 374 1 374 7.47e-82 255
MS.gene29313.t1 AT1G56670 46.992 266 133 4 34 298 39 297 5.55e-76 237
MS.gene29313.t1 AT3G62280 43.173 271 142 4 34 302 35 295 2.48e-69 220
MS.gene29313.t1 AT4G01130 37.586 290 175 4 89 374 1 288 9.50e-61 198
MS.gene29313.t1 AT1G28600 31.795 390 215 16 8 374 5 366 2.22e-50 174
MS.gene29313.t1 AT1G28610 33.148 359 204 11 32 374 28 366 3.45e-50 173
MS.gene29313.t1 AT2G27360 31.538 390 227 13 5 375 3 371 6.42e-50 173
MS.gene29313.t1 AT4G01130 36.066 305 181 7 1 298 1 298 7.14e-50 171
MS.gene29313.t1 AT1G28580 32.405 395 208 16 10 374 8 373 1.86e-47 166
MS.gene29313.t1 AT1G31550 33.242 364 197 15 32 374 33 371 2.33e-47 166
MS.gene29313.t1 AT3G48460 30.130 385 224 12 12 376 13 372 3.11e-47 165
MS.gene29313.t1 AT1G31550 32.507 363 198 16 32 374 33 368 3.04e-44 157
MS.gene29313.t1 AT1G28650 30.026 383 233 12 9 374 9 373 4.19e-44 157
MS.gene29313.t1 AT1G28570 30.990 384 224 15 11 374 8 370 4.20e-44 157
MS.gene29313.t1 AT1G28590 31.680 363 205 14 32 374 33 372 9.56e-44 157
MS.gene29313.t1 AT1G28670 31.300 377 223 12 16 374 14 372 5.46e-42 151
MS.gene29313.t1 AT5G45910 29.367 395 225 13 9 375 4 372 2.76e-41 149
MS.gene29313.t1 AT1G28640 30.446 381 220 12 16 374 14 371 3.71e-41 149
MS.gene29313.t1 AT1G28660 31.593 383 213 14 16 374 14 371 2.23e-40 147
MS.gene29313.t1 AT1G28660 31.152 382 215 14 16 374 14 370 1.02e-39 145
MS.gene29313.t1 AT1G28580 31.090 312 175 13 79 374 5 292 4.06e-32 123
MS.gene29313.t1 AT4G10950 26.891 357 207 12 34 371 70 391 8.37e-32 124
MS.gene29313.t1 AT5G15720 29.379 354 208 12 34 372 29 355 3.15e-30 119
MS.gene29313.t1 AT5G22810 30.086 349 207 13 34 370 33 356 3.17e-30 119
MS.gene29313.t1 AT3G16370 28.035 346 216 10 34 370 29 350 4.65e-30 119
MS.gene29313.t1 AT2G23540 29.114 316 178 12 68 367 86 371 1.15e-29 118
MS.gene29313.t1 AT2G04570 25.886 367 234 12 14 369 7 346 1.63e-29 117
MS.gene29313.t1 AT1G20120 28.242 347 205 11 33 365 76 392 9.39e-29 116
MS.gene29313.t1 AT2G40250 28.406 345 201 11 35 362 36 351 1.26e-28 115
MS.gene29313.t1 AT4G10950 26.331 357 205 13 34 371 70 387 1.28e-28 115
MS.gene29313.t1 AT1G28570 31.304 230 140 9 152 374 80 298 3.43e-28 113
MS.gene29313.t1 AT5G42170 27.353 340 214 11 33 365 48 361 1.01e-27 112
MS.gene29313.t1 AT1G28570 32.075 212 127 8 169 374 7 207 5.84e-27 107
MS.gene29313.t1 AT5G03810 26.163 344 215 11 34 365 29 345 8.54e-27 109
MS.gene29313.t1 AT1G20132 28.571 350 205 13 34 369 60 378 2.05e-26 109
MS.gene29313.t1 AT2G42990 27.348 362 220 13 14 363 10 340 2.34e-26 108
MS.gene29313.t1 AT4G26790 26.724 348 209 11 33 365 27 343 3.80e-26 108
MS.gene29313.t1 AT4G26790 26.724 348 209 11 33 365 27 343 3.80e-26 108
MS.gene29313.t1 AT3G14225 30.172 348 184 16 60 386 66 375 4.55e-26 108
MS.gene29313.t1 AT3G14225 30.523 344 184 14 60 386 66 371 6.73e-26 107
MS.gene29313.t1 AT5G63170 27.019 359 212 11 9 356 2 321 1.27e-25 106
MS.gene29313.t1 AT3G53100 27.566 341 213 12 34 365 28 343 1.30e-25 106
MS.gene29313.t1 AT1G29670 25.789 380 235 13 14 380 10 355 1.69e-25 106
MS.gene29313.t1 AT5G08460 29.167 360 201 13 33 371 47 373 1.87e-25 106
MS.gene29313.t1 AT1G29670 25.789 380 235 13 14 380 78 423 3.59e-25 106
MS.gene29313.t1 AT1G59406 27.596 366 228 14 9 365 4 341 4.27e-25 105
MS.gene29313.t1 AT1G59030 27.596 366 228 14 9 365 4 341 4.27e-25 105
MS.gene29313.t1 AT1G58725 27.596 366 228 14 9 365 4 341 4.27e-25 105
MS.gene29313.t1 AT5G45950 25.429 350 215 11 28 365 33 348 4.83e-25 105
MS.gene29313.t1 AT1G75900 27.794 349 203 13 33 365 41 356 5.76e-25 105
MS.gene29313.t1 AT1G71691 27.193 342 213 10 34 367 54 367 9.69e-25 104
MS.gene29313.t1 AT3G14820 26.966 356 226 11 17 365 14 342 1.09e-24 103
MS.gene29313.t1 AT1G75890 27.353 340 212 12 34 363 46 360 1.10e-24 104
MS.gene29313.t1 AT5G40990 28.982 383 236 14 13 386 16 371 1.29e-24 104
MS.gene29313.t1 AT1G75890 27.353 340 212 12 34 363 75 389 1.46e-24 104
MS.gene29313.t1 AT1G53940 30.721 319 183 13 60 367 68 359 1.66e-24 103
MS.gene29313.t1 AT3G50400 27.479 353 208 13 35 367 34 358 1.97e-24 103
MS.gene29313.t1 AT1G71120 25.575 348 210 11 34 367 30 342 3.67e-24 102
MS.gene29313.t1 AT4G28780 27.479 353 212 13 35 372 31 354 4.27e-24 102
MS.gene29313.t1 AT1G20130 26.211 351 221 12 33 369 202 528 6.47e-24 103
MS.gene29313.t1 AT1G20130 26.211 351 221 12 33 369 182 508 6.95e-24 103
MS.gene29313.t1 AT1G75890 27.168 346 218 13 34 363 46 373 1.61e-23 101
MS.gene29313.t1 AT1G53920 25.532 376 233 11 11 369 21 366 2.78e-23 100
MS.gene29313.t1 AT1G33811 27.346 373 242 13 10 372 8 361 3.32e-23 100
MS.gene29313.t1 AT5G03820 25.575 348 213 14 34 365 32 349 3.82e-23 99.8
MS.gene29313.t1 AT1G71250 26.934 349 217 10 34 371 40 361 3.95e-23 100
MS.gene29313.t1 AT1G73610 28.235 340 197 10 35 365 35 336 6.40e-23 99.0
MS.gene29313.t1 AT1G29660 26.031 388 240 13 11 384 10 364 7.34e-23 99.0
MS.gene29313.t1 AT5G03820 25.575 348 213 14 34 365 60 377 8.38e-23 99.4
MS.gene29313.t1 AT2G30220 27.793 367 211 14 18 364 16 348 1.53e-22 98.2
MS.gene29313.t1 AT4G18970 24.444 360 232 11 34 383 27 356 1.89e-22 97.8
MS.gene29313.t1 AT5G45960 26.284 331 210 14 35 354 47 354 2.45e-22 97.8
MS.gene29313.t1 AT4G18970 24.444 360 232 11 34 383 27 356 3.15e-22 97.8
MS.gene29313.t1 AT5G15720 28.094 299 176 10 87 372 52 324 3.27e-22 96.7
MS.gene29313.t1 AT5G45670 23.238 383 253 11 11 383 6 357 4.82e-22 96.7
MS.gene29313.t1 AT1G74460 27.114 343 206 13 37 365 25 337 8.26e-22 96.3
MS.gene29313.t1 AT1G75880 26.686 341 216 11 34 365 51 366 9.02e-22 96.3
MS.gene29313.t1 AT5G18430 25.915 355 217 13 35 372 28 353 1.28e-21 95.5
MS.gene29313.t1 AT3G04290 25.926 351 220 11 35 372 29 352 1.43e-21 95.5
MS.gene29313.t1 AT1G58520 27.299 348 213 14 25 365 20 334 4.81e-21 93.6
MS.gene29313.t1 AT1G58525 27.299 348 213 14 25 365 20 334 4.81e-21 93.6
MS.gene29313.t1 AT1G20135 26.997 363 215 10 9 360 3 326 4.93e-21 93.2
MS.gene29313.t1 AT1G75880 26.608 342 216 12 34 365 51 367 5.06e-21 94.0
MS.gene29313.t1 AT5G15720 29.137 278 170 9 34 298 29 292 1.28e-20 92.0
MS.gene29313.t1 AT1G75910 24.796 367 227 11 12 365 5 335 1.33e-20 92.4
MS.gene29313.t1 AT2G30310 25.532 376 210 13 18 362 11 347 1.56e-20 92.4
MS.gene29313.t1 AT1G06990 24.933 373 222 13 12 356 1 343 1.92e-20 92.0
MS.gene29313.t1 AT2G31540 24.359 390 235 13 5 369 4 358 3.90e-20 91.3
MS.gene29313.t1 AT5G41890 24.478 335 193 11 60 367 58 359 1.49e-19 89.7
MS.gene29313.t1 AT2G19060 25.886 367 221 14 19 372 13 341 2.18e-19 89.0
MS.gene29313.t1 AT2G03980 31.559 263 151 11 32 284 40 283 7.03e-19 87.8
MS.gene29313.t1 AT2G03980 31.559 263 151 11 32 284 40 283 7.03e-19 87.8
MS.gene29313.t1 AT2G03980 31.559 263 151 11 32 284 40 283 7.03e-19 87.8
MS.gene29313.t1 AT2G03980 31.559 263 151 11 32 284 40 283 7.03e-19 87.8
MS.gene29313.t1 AT5G55050 28.455 369 217 15 23 372 27 367 4.32e-18 85.5
MS.gene29313.t1 AT2G19050 26.124 356 201 13 34 372 30 340 4.65e-18 85.1
MS.gene29313.t1 AT1G28600 32.093 215 115 11 8 206 5 204 5.50e-18 82.4
MS.gene29313.t1 AT5G33370 25.836 329 196 13 60 372 57 353 5.91e-18 84.7
MS.gene29313.t1 AT1G54010 27.174 368 216 15 5 358 3 332 6.42e-18 85.1
MS.gene29313.t1 AT1G54030 27.451 306 174 10 59 360 79 340 9.89e-18 84.7
MS.gene29313.t1 AT1G58430 23.316 386 235 13 5 366 4 352 1.05e-17 84.0
MS.gene29313.t1 AT1G53990 27.296 392 232 15 10 384 11 366 1.30e-17 84.0
MS.gene29313.t1 AT1G71691 27.143 280 167 9 34 298 54 311 1.55e-17 83.2
MS.gene29313.t1 AT3G14220 25.066 379 225 15 5 367 2 337 2.70e-17 82.8
MS.gene29313.t1 AT1G71691 25.170 294 172 10 87 367 8 266 2.84e-17 81.6
MS.gene29313.t1 AT1G54020 25.291 344 207 10 32 365 28 331 3.37e-17 82.8
MS.gene29313.t1 AT1G75930 28.374 289 179 10 32 307 26 299 3.46e-17 82.4
MS.gene29313.t1 AT1G54000 26.171 363 214 15 12 361 14 335 2.34e-16 80.5
MS.gene29313.t1 AT2G24560 24.425 348 209 14 33 360 32 345 3.32e-16 79.7
MS.gene29313.t1 AT1G75920 25.344 363 204 14 32 365 21 345 3.85e-16 79.3
MS.gene29313.t1 AT2G19010 25.419 358 201 13 34 372 59 369 1.11e-15 78.2
MS.gene29313.t1 AT2G19010 25.419 358 201 13 34 372 29 339 1.12e-15 78.2
MS.gene29313.t1 AT4G16233 34.400 125 70 2 247 371 6 118 1.12e-15 73.6
MS.gene29313.t1 AT5G03980 25.352 213 142 7 161 366 114 316 1.47e-15 77.4
MS.gene29313.t1 AT1G28610 31.383 188 105 6 32 206 28 204 1.89e-15 75.9
MS.gene29313.t1 AT1G75920 24.684 316 192 11 60 365 28 307 3.58e-15 76.3
MS.gene29313.t1 AT5G37690 24.854 342 209 13 39 365 31 339 1.95e-14 74.3
MS.gene29313.t1 AT3G43550 27.333 300 190 13 11 298 3 286 3.52e-14 72.8
MS.gene29313.t1 AT5G03610 23.529 340 210 11 36 362 44 346 1.22e-13 72.0
MS.gene29313.t1 AT1G53940 29.600 250 145 10 60 298 68 297 1.71e-13 70.9
MS.gene29313.t1 AT2G19050 27.206 272 153 10 34 288 30 273 1.71e-13 70.9
MS.gene29313.t1 AT2G31550 22.870 223 133 7 163 370 20 218 4.19e-13 68.6
MS.gene29313.t1 AT5G37690 24.265 272 163 10 104 365 93 331 1.61e-12 68.6
MS.gene29313.t1 AT2G04020 31.776 214 122 9 32 234 40 240 2.37e-12 67.0
MS.gene29313.t1 AT2G04020 31.776 214 122 9 32 234 40 240 3.43e-12 67.4
MS.gene29313.t1 AT3G09930 22.807 342 211 12 36 362 40 343 2.70e-11 64.7
MS.gene29313.t1 AT3G09930 22.807 342 211 12 36 362 40 343 2.70e-11 64.7
MS.gene29313.t1 AT3G14210 25.833 360 207 16 35 378 36 351 3.02e-11 65.1
MS.gene29313.t1 AT5G03600 24.556 338 205 16 34 362 13 309 3.76e-11 64.3
MS.gene29313.t1 AT5G03600 23.964 338 207 15 34 362 48 344 5.51e-11 63.9

Find 90 sgRNAs with CRISPR-Local

Find 193 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTCTCCTTTGGGATTC+AGG 0.044235 7.2:+3488138 MS.gene29313:CDS
GCCATTCTTAAATGCATATT+TGG 0.136590 7.2:+3488027 MS.gene29313:CDS
TTACAACCTTTCCTAAAATT+TGG 0.148502 7.2:-3488064 None:intergenic
CCCTCTGCCCTTTCTCCTTT+GGG 0.151136 7.2:+3488131 MS.gene29313:CDS
AATAAGCACATTATTATTCT+TGG 0.193684 7.2:-3486431 None:intergenic
TGATGGATCAGTTCCAAATT+TGG 0.197023 7.2:-3488659 None:intergenic
GCTCAGAATGTAGCCAAATT+TGG 0.208634 7.2:+3488646 MS.gene29313:CDS
TCCCTCTGCCCTTTCTCCTT+TGG 0.229352 7.2:+3488130 MS.gene29313:CDS
AGAATTTGAATCTGGAATTA+AGG 0.237994 7.2:+3488448 MS.gene29313:CDS
TTTCAGCTTGTTCCACCTTA+TGG 0.261204 7.2:+3486580 MS.gene29313:CDS
AGCATGAAGTTGTAGGTTAA+AGG 0.261879 7.2:-3488731 None:intergenic
CCTAGTTCATCAAGCTTTGA+TGG 0.273723 7.2:-3488676 None:intergenic
CGCGCTCTTGAATTGCTTGC+AGG 0.276885 7.2:+3488187 MS.gene29313:CDS
AAATGCATATTTGGATTCAT+TGG 0.318406 7.2:+3488036 MS.gene29313:CDS
TGCTCTGTGTAGTAAATTGC+AGG 0.331048 7.2:+3488750 MS.gene29313:CDS
TATCCACAACATGCCATAAT+AGG 0.340753 7.2:-3489156 None:intergenic
AAGTACTTGGTCCAAAGTTT+TGG 0.347266 7.2:-3488402 None:intergenic
TCAAATTCTAAAAGAATTGT+TGG 0.351758 7.2:-3488434 None:intergenic
TGTAATTGTCGTTCCATTGA+AGG 0.359086 7.2:-3489232 None:intergenic
CAACTTAGGTGATTCAAATT+CGG 0.362793 7.2:+3486528 MS.gene29313:CDS
ATTATGGCATGTTGTGGATA+TGG 0.374728 7.2:+3489159 MS.gene29313:CDS
CCATCACAGGCCCTTCCATT+TGG 0.376231 7.2:-3486622 None:intergenic
AGGGTTTGAACAACCTATTA+TGG 0.383539 7.2:+3489143 MS.gene29313:intron
AATGCATATTTGGATTCATT+GGG 0.397716 7.2:+3488037 MS.gene29313:CDS
ATGCACCAGCAAGATCATTC+TGG 0.412020 7.2:-3488373 None:intergenic
CTTGAATTGCTTGCAGGAAA+AGG 0.426571 7.2:+3488193 MS.gene29313:CDS
TTGAAGTAGTTCTGTCCATA+AGG 0.431121 7.2:-3486595 None:intergenic
ACATATGTGACATTTGAATC+TGG 0.436387 7.2:-3488781 None:intergenic
GGTTGTAACTTTGCAGCAGC+TGG 0.442366 7.2:+3488079 MS.gene29313:CDS
TCACCTAAGTTGAAAACTGC+TGG 0.446971 7.2:-3486517 None:intergenic
AACTACTTCAAAACTCCAAA+TGG 0.448519 7.2:+3486607 MS.gene29313:CDS
CCATCAAAGCTTGATGAACT+AGG 0.448934 7.2:+3488676 MS.gene29313:CDS
GATACACAATACAGGTCCTC+TGG 0.451058 7.2:+3488615 MS.gene29313:CDS
TACAGGTCCTCTGGGATGCT+TGG 0.454524 7.2:+3488624 MS.gene29313:CDS
TCCAAATATGCATTTAAGAA+TGG 0.454805 7.2:-3488028 None:intergenic
ACAGTTCTGAGTATATCAAC+TGG 0.456549 7.2:+3489271 MS.gene29313:CDS
TACACAGAGCATGAAGTTGT+AGG 0.457023 7.2:-3488738 None:intergenic
GGGAACACAAAGACCTTCAA+TGG 0.460647 7.2:+3489219 MS.gene29313:CDS
GGTGAACTTACAGTTGGGTT+GGG 0.464328 7.2:+3486556 MS.gene29313:CDS
ATTGCAAATTATTCTAGATA+CGG 0.471729 7.2:+3488832 MS.gene29313:CDS
GGAACGACAATTACAGCAAA+AGG 0.471811 7.2:+3489240 MS.gene29313:CDS
CAGAGGGATGATGCAGTGGC+TGG 0.475339 7.2:-3488115 None:intergenic
ACCTGAATCCCAAAGGAGAA+AGG 0.487971 7.2:-3488139 None:intergenic
TTGGAATGGAGGCAAGTACT+TGG 0.488366 7.2:-3488415 None:intergenic
ATTGGCCAGAATGATCTTGC+TGG 0.494393 7.2:+3488368 MS.gene29313:CDS
GTTGTTTGCAGTGGATGCAT+TGG 0.498025 7.2:+3488000 MS.gene29313:intron
GACACAGGTGAACTTACAGT+TGG 0.510158 7.2:+3486550 MS.gene29313:CDS
GAGCGCGAGCTTTGAACTTG+AGG 0.512637 7.2:-3488171 None:intergenic
AACTTGAGCTTGAGAAGGAA+TGG 0.518487 7.2:-3489387 None:intergenic
CCTGAATCCCAAAGGAGAAA+GGG 0.521210 7.2:-3488138 None:intergenic
AGGTGAACTTACAGTTGGGT+TGG 0.523219 7.2:+3486555 MS.gene29313:CDS
GGATTATACATGTTTGACAT+TGG 0.523669 7.2:+3488350 MS.gene29313:CDS
GATGAACTAGGATGTGTTAG+TGG 0.524106 7.2:+3488688 MS.gene29313:CDS
TTCTAAAAGAATTGTTGGAA+TGG 0.529731 7.2:-3488429 None:intergenic
TAAAAGAATTGTTGGAATGG+AGG 0.531513 7.2:-3488426 None:intergenic
ACTCTACTGTCATAGTTCAA+TGG 0.536947 7.2:-3489189 None:intergenic
AACAATGAGACGGCCATCAC+AGG 0.544497 7.2:-3486635 None:intergenic
ATGACAGTAGAGTGACTTGT+GGG 0.545670 7.2:+3489199 MS.gene29313:CDS
TATTTCTGGATACACAATAC+AGG 0.545778 7.2:+3488607 MS.gene29313:CDS
GTTGCATCACAGATTCTCAC+TGG 0.548587 7.2:+3489330 MS.gene29313:CDS
ATCTAGAATAATTTGCAATG+AGG 0.555564 7.2:-3488828 None:intergenic
TTTAGAACTTGAGCTTGAGA+AGG 0.563689 7.2:-3489392 None:intergenic
ACACAGGTGAACTTACAGTT+GGG 0.567683 7.2:+3486551 MS.gene29313:CDS
TCTGAGTATATCAACTGGGA+TGG 0.570331 7.2:+3489276 MS.gene29313:CDS
TTCAAACTAAGGGCCATGGC+GGG 0.575921 7.2:+3486403 None:intergenic
TGATAGAGACTATATGATGA+GGG 0.576750 7.2:+3488577 MS.gene29313:intron
GGGATGATGCAGTGGCTGGA+AGG 0.577213 7.2:-3488111 None:intergenic
ACTTCAAAACTCCAAATGGA+AGG 0.586030 7.2:+3486611 MS.gene29313:CDS
AAGTAGTTCTGTCCATAAGG+TGG 0.589355 7.2:-3486592 None:intergenic
GGTGATTCAAATTCGGACAC+AGG 0.594936 7.2:+3486535 MS.gene29313:CDS
TTGATAGAGACTATATGATG+AGG 0.597221 7.2:+3488576 MS.gene29313:intron
CCAAATGGAAGGGCCTGTGA+TGG 0.598248 7.2:+3486622 MS.gene29313:CDS
ATTCTTGGAATCACCCGCCA+TGG 0.603699 7.2:-3486416 None:intergenic
CAACCTATTATGGCATGTTG+TGG 0.613380 7.2:+3489153 MS.gene29313:CDS
CAGTTCTGAGTATATCAACT+GGG 0.617548 7.2:+3489272 MS.gene29313:CDS
ATACACAATACAGGTCCTCT+GGG 0.618984 7.2:+3488616 MS.gene29313:CDS
CCCAAAGGAGAAAGGGCAGA+GGG 0.623206 7.2:-3488131 None:intergenic
AGGGCAGAGGGATGATGCAG+TGG 0.626862 7.2:-3488119 None:intergenic
TCCCAAAGGAGAAAGGGCAG+AGG 0.629994 7.2:-3488132 None:intergenic
ATAGAGACTATATGATGAGG+GGG 0.637313 7.2:+3488579 MS.gene29313:intron
CTTCAAAACTCCAAATGGAA+GGG 0.644426 7.2:+3486612 MS.gene29313:CDS
CTACTGTCATAGTTCAATGG+TGG 0.651617 7.2:-3489186 None:intergenic
GATAGAGACTATATGATGAG+GGG 0.655430 7.2:+3488578 MS.gene29313:intron
TATGACAGTAGAGTGACTTG+TGG 0.659401 7.2:+3489198 MS.gene29313:CDS
GCTCTGTGTAGTAAATTGCA+GGG 0.661282 7.2:+3488751 MS.gene29313:CDS
CTGAGACACCTGAATCCCAA+AGG 0.666075 7.2:-3488146 None:intergenic
ATGAACTAGGATGTGTTAGT+GGG 0.666553 7.2:+3488689 MS.gene29313:CDS
TTAGGAAGTCAACAATGAGA+CGG 0.673079 7.2:-3486645 None:intergenic
ATGGCATGTTGTGGATATGG+AGG 0.676401 7.2:+3489162 MS.gene29313:CDS
TTCTGAGCCAAGCATCCCAG+AGG 0.701144 7.2:-3488631 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATATCATAACATAAATA+AGG + chr7.2:3487348-3487367 MS.gene29313:intron 10.0%
!! TGATTTATGATATAATATTA+TGG + chr7.2:3487248-3487267 MS.gene29313:intron 10.0%
!!! AATTAATGTATTTTTTTTAC+AGG + chr7.2:3487124-3487143 MS.gene29313:intron 10.0%
!!! ACTTTGTTTTTTTAAAATAA+AGG + chr7.2:3486799-3486818 MS.gene29313:intron 10.0%
!!! ATCTTATTTAAATATGTTTT+TGG - chr7.2:3487209-3487228 None:intergenic 10.0%
!! AAAATTCAAAACTAAATTAG+TGG - chr7.2:3488228-3488247 None:intergenic 15.0%
!! ATATTACACACATTATAAAT+TGG + chr7.2:3486992-3487011 MS.gene29313:intron 15.0%
!! ATTGTTAGATAGAAAAATAA+TGG + chr7.2:3487566-3487585 MS.gene29313:intron 15.0%
!! GTAATATTTATATATTTGCA+GGG + chr7.2:3489124-3489143 MS.gene29313:intron 15.0%
!! TAAAAGTAAAATGTATTTGT+AGG + chr7.2:3487182-3487201 MS.gene29313:intron 15.0%
!! TACAATGTAAAATATATTTC+AGG - chr7.2:3486913-3486932 None:intergenic 15.0%
!! TGTAATATTTATATATTTGC+AGG + chr7.2:3489123-3489142 MS.gene29313:intron 15.0%
!! TTTAGGTAAGTATAATAATT+TGG + chr7.2:3487385-3487404 MS.gene29313:intron 15.0%
!!! AAAAAACATATTTCTTTTAC+TGG - chr7.2:3486840-3486859 None:intergenic 15.0%
!!! AATGCAAACTTTTTAATTTA+CGG - chr7.2:3487941-3487960 None:intergenic 15.0%
!!! TATTACATTTATCTTTTTCA+CGG + chr7.2:3488869-3488888 MS.gene29313:intron 15.0%
!! AAAGAAAAAAAAAAGTTGCA+AGG - chr7.2:3486865-3486884 None:intergenic 20.0%
!! AAGTATAATAATTTGGACAA+AGG + chr7.2:3487392-3487411 MS.gene29313:intron 20.0%
!! AATAAGCACATTATTATTCT+TGG - chr7.2:3486434-3486453 None:intergenic 20.0%
!! AATAATCAATTAATTAGCCA+TGG + chr7.2:3487672-3487691 MS.gene29313:intron 20.0%
!! AATCATAATACAAACTCTAA+AGG - chr7.2:3488901-3488920 None:intergenic 20.0%
!! ATTACAAATTTAACAACTCT+TGG - chr7.2:3489109-3489128 None:intergenic 20.0%
!! ATTGCAAATTATTCTAGATA+CGG + chr7.2:3488832-3488851 MS.gene29313:CDS 20.0%
!! TATGCAAATTATACATATGA+TGG - chr7.2:3487701-3487720 None:intergenic 20.0%
!!! ATTACATTTATCTTTTTCAC+GGG + chr7.2:3488870-3488889 MS.gene29313:intron 20.0%
!!! ATTCTTTTAGAATTTGAATC+TGG + chr7.2:3488440-3488459 MS.gene29313:CDS 20.0%
!!! ATTTTATACATATACATCGT+CGG + chr7.2:3488918-3488937 MS.gene29313:intron 20.0%
!!! GCAACTTTTTTTTTTCTTTT+TGG + chr7.2:3486866-3486885 MS.gene29313:intron 20.0%
!!! GCTTTCATTTTGTTTATTTT+TGG + chr7.2:3488488-3488507 MS.gene29313:intron 20.0%
!!! TCAAATTCTAAAAGAATTGT+TGG - chr7.2:3488437-3488456 None:intergenic 20.0%
!!! TGAGAATTCTTTTATGTTAA+TGG - chr7.2:3488540-3488559 None:intergenic 20.0%
!!! TTCATTTTAGTCATTATGTT+TGG - chr7.2:3486973-3486992 None:intergenic 20.0%
! AAATGCATATTTGGATTCAT+TGG + chr7.2:3488036-3488055 MS.gene29313:CDS 25.0%
! AATGCATATTTGGATTCATT+GGG + chr7.2:3488037-3488056 MS.gene29313:CDS 25.0%
! ACCAATACTTTCAATTTGAT+TGG + chr7.2:3487062-3487081 MS.gene29313:intron 25.0%
! CATAAATAAGGACATATGAT+AGG + chr7.2:3487360-3487379 MS.gene29313:intron 25.0%
! CCAATACTTTCAATTTGATT+GGG + chr7.2:3487063-3487082 MS.gene29313:intron 25.0%
! CTACTTAATGGAATAAAACT+TGG + chr7.2:3487296-3487315 MS.gene29313:intron 25.0%
! TAAGAAAATCAATGATGAGA+CGG - chr7.2:3487903-3487922 None:intergenic 25.0%
! TCCAAATATGCATTTAAGAA+TGG - chr7.2:3488031-3488050 None:intergenic 25.0%
! TTACAACCTTTCCTAAAATT+TGG - chr7.2:3488067-3488086 None:intergenic 25.0%
! TTGATGTTTCTTTGTATGTT+TGG - chr7.2:3487547-3487566 None:intergenic 25.0%
!! AAAATCTAAATGGATGGATT+CGG - chr7.2:3487752-3487771 None:intergenic 25.0%
!! AGAATTTGAATCTGGAATTA+AGG + chr7.2:3488448-3488467 MS.gene29313:CDS 25.0%
!! ATCTAGAATAATTTGCAATG+AGG - chr7.2:3488831-3488850 None:intergenic 25.0%
!! CAACATGAACAAATTTTACA+AGG + chr7.2:3487022-3487041 MS.gene29313:intron 25.0%
!! TGCATTTTATTCCAAAACTT+TGG + chr7.2:3488391-3488410 MS.gene29313:CDS 25.0%
!! TTCTAAAAGAATTGTTGGAA+TGG - chr7.2:3488432-3488451 None:intergenic 25.0%
!! TTTTAGTCATTATGTTTGGA+AGG - chr7.2:3486969-3486988 None:intergenic 25.0%
!!! CAAGTTTTATTCCATTAAGT+AGG - chr7.2:3487298-3487317 None:intergenic 25.0%
AAACTGCTGGAAAATCTAAA+TGG - chr7.2:3487762-3487781 None:intergenic 30.0%
AACTACTTCAAAACTCCAAA+TGG + chr7.2:3486607-3486626 MS.gene29313:CDS 30.0%
ACAAGGACTAAAAAACATCA+AGG + chr7.2:3487039-3487058 MS.gene29313:intron 30.0%
ACATATGTGACATTTGAATC+TGG - chr7.2:3488784-3488803 None:intergenic 30.0%
ATGTTTCTTTGTATGTTTGG+TGG - chr7.2:3487544-3487563 None:intergenic 30.0%
CAACTTAGGTGATTCAAATT+CGG + chr7.2:3486528-3486547 MS.gene29313:CDS 30.0%
GCAAATTATACATATGATGG+TGG - chr7.2:3487698-3487717 None:intergenic 30.0%
GCCATTCTTAAATGCATATT+TGG + chr7.2:3488027-3488046 MS.gene29313:CDS 30.0%
GGATTATACATGTTTGACAT+TGG + chr7.2:3488350-3488369 MS.gene29313:CDS 30.0%
TAAAAGAATTGTTGGAATGG+AGG - chr7.2:3488429-3488448 None:intergenic 30.0%
TAATTTGGACAAAGGAATCT+TGG + chr7.2:3487400-3487419 MS.gene29313:intron 30.0%
TGATAGAGACTATATGATGA+GGG + chr7.2:3488577-3488596 MS.gene29313:intron 30.0%
TGTTTCTTTGTATGTTTGGT+GGG - chr7.2:3487543-3487562 None:intergenic 30.0%
TTCAACAACATTGCACTATT+TGG - chr7.2:3487477-3487496 None:intergenic 30.0%
TTCTCAAAAATATCTTCGCT+CGG - chr7.2:3488329-3488348 None:intergenic 30.0%
TTGATAGAGACTATATGATG+AGG + chr7.2:3488576-3488595 MS.gene29313:intron 30.0%
! CCCAATCAAATTGAAAGTAT+TGG - chr7.2:3487066-3487085 None:intergenic 30.0%
! TTTGAATCTGGAATTAAGGT+TGG + chr7.2:3488452-3488471 MS.gene29313:intron 30.0%
! TTTTCCTAATGATGTTGTCT+TGG + chr7.2:3487975-3487994 MS.gene29313:intron 30.0%
!! AGCGAAGATATTTTTGAGAA+AGG + chr7.2:3488329-3488348 MS.gene29313:CDS 30.0%
!! TATTTCTGGATACACAATAC+AGG + chr7.2:3488607-3488626 MS.gene29313:CDS 30.0%
!!! TGTGTTATTTTGCACATGTT+TGG + chr7.2:3486465-3486484 MS.gene29313:CDS 30.0%
ACAACATTGCACTATTTGGA+TGG - chr7.2:3487473-3487492 None:intergenic 35.0%
ACAACCAAGACAACATCATT+AGG - chr7.2:3487982-3488001 None:intergenic 35.0%
ACTCTACTGTCATAGTTCAA+TGG - chr7.2:3489192-3489211 None:intergenic 35.0%
ACTTACTTTCATCTACCATC+AGG + chr7.2:3487862-3487881 MS.gene29313:intron 35.0%
ACTTCAAAACTCCAAATGGA+AGG + chr7.2:3486611-3486630 MS.gene29313:CDS 35.0%
AGCATGAAGTTGTAGGTTAA+AGG - chr7.2:3488734-3488753 None:intergenic 35.0%
AGGAACTAAAAGATACACAG+AGG - chr7.2:3486893-3486912 None:intergenic 35.0%
AGGACATATGATAGGAGTTT+AGG + chr7.2:3487368-3487387 MS.gene29313:intron 35.0%
AGGGTTTGAACAACCTATTA+TGG + chr7.2:3489143-3489162 MS.gene29313:intron 35.0%
ATAGAGACTATATGATGAGG+GGG + chr7.2:3488579-3488598 MS.gene29313:intron 35.0%
ATCACAATCAATCATACGTG+TGG - chr7.2:3489016-3489035 None:intergenic 35.0%
ATGAACTAGGATGTGTTAGT+GGG + chr7.2:3488689-3488708 MS.gene29313:CDS 35.0%
ATGTAGCTGATCCTACTTAA+TGG + chr7.2:3487284-3487303 MS.gene29313:intron 35.0%
ATTATGGCATGTTGTGGATA+TGG + chr7.2:3489159-3489178 MS.gene29313:CDS 35.0%
CTTACTTTCATCTACCATCA+GGG + chr7.2:3487863-3487882 MS.gene29313:intron 35.0%
CTTCAAAACTCCAAATGGAA+GGG + chr7.2:3486612-3486631 MS.gene29313:CDS 35.0%
GATAGAGACTATATGATGAG+GGG + chr7.2:3488578-3488597 MS.gene29313:intron 35.0%
GGAACTAAAAGATACACAGA+GGG - chr7.2:3486892-3486911 None:intergenic 35.0%
GGCACAAGGTAATAAGAATA+TGG - chr7.2:3487731-3487750 None:intergenic 35.0%
TATCCACAACATGCCATAAT+AGG - chr7.2:3489159-3489178 None:intergenic 35.0%
TCACAATCAATCATACGTGT+GGG - chr7.2:3489015-3489034 None:intergenic 35.0%
TCTAGATACGGTTAGTAACT+TGG + chr7.2:3488844-3488863 MS.gene29313:intron 35.0%
TCTCAAAAATATCTTCGCTC+GGG - chr7.2:3488328-3488347 None:intergenic 35.0%
TGAAAGTAAGTGTGTCCATT+TGG - chr7.2:3487853-3487872 None:intergenic 35.0%
TGCTGGAAAATCTAAATGGA+TGG - chr7.2:3487758-3487777 None:intergenic 35.0%
TGTAATTGTCGTTCCATTGA+AGG - chr7.2:3489235-3489254 None:intergenic 35.0%
TTAGGAAGTCAACAATGAGA+CGG - chr7.2:3486648-3486667 None:intergenic 35.0%
TTCACTCTTTCAAGCATTTC+AGG + chr7.2:3488281-3488300 MS.gene29313:intron 35.0%
TTTCAAAAACAAGCAAACCC+TGG + chr7.2:3487620-3487639 MS.gene29313:intron 35.0%
! AAGTACTTGGTCCAAAGTTT+TGG - chr7.2:3488405-3488424 None:intergenic 35.0%
! AATGGCATTTTGTCTGAGAA+AGG - chr7.2:3489372-3489391 None:intergenic 35.0%
! ATTTTGCACATGTTTGGAAG+TGG + chr7.2:3486471-3486490 MS.gene29313:CDS 35.0%
! CATTGGGTTTGCCAAATTTT+AGG + chr7.2:3488053-3488072 MS.gene29313:CDS 35.0%
! TGATGGATCAGTTCCAAATT+TGG - chr7.2:3488662-3488681 None:intergenic 35.0%
! TTGAAGTAGTTCTGTCCATA+AGG - chr7.2:3486598-3486617 None:intergenic 35.0%
! TTTCCAGCAGTTTTCAACTT+AGG + chr7.2:3486514-3486533 MS.gene29313:CDS 35.0%
! TTTCCAGCAGTTTTCAACTT+TGG + chr7.2:3486514-3486533 MS.gene29313:CDS 35.0%
!! ACAGTTCTGAGTATATCAAC+TGG + chr7.2:3489271-3489290 MS.gene29313:CDS 35.0%
!! CAGTTCTGAGTATATCAACT+GGG + chr7.2:3489272-3489291 MS.gene29313:CDS 35.0%
!! GGTTTGCCAAATTTTAGGAA+AGG + chr7.2:3488058-3488077 MS.gene29313:CDS 35.0%
!! TATGTGTTTTAAGCCTTCCA+GGG - chr7.2:3487640-3487659 None:intergenic 35.0%
AAAAACAAGCAAACCCTGGA+AGG + chr7.2:3487624-3487643 MS.gene29313:intron 40.0%
AACTTGAGCTTGAGAAGGAA+TGG - chr7.2:3489390-3489409 None:intergenic 40.0%
AAGTAAGTGTGTCCATTTGG+TGG - chr7.2:3487850-3487869 None:intergenic 40.0%
ACACAGGTGAACTTACAGTT+GGG + chr7.2:3486551-3486570 MS.gene29313:CDS 40.0%
AGTAAGTGTGTCCATTTGGT+GGG - chr7.2:3487849-3487868 None:intergenic 40.0%
ATACACAATACAGGTCCTCT+GGG + chr7.2:3488616-3488635 MS.gene29313:CDS 40.0%
CAACCTATTATGGCATGTTG+TGG + chr7.2:3489153-3489172 MS.gene29313:CDS 40.0%
CCATCAAAGCTTGATGAACT+AGG + chr7.2:3488676-3488695 MS.gene29313:CDS 40.0%
CTACTGTCATAGTTCAATGG+TGG - chr7.2:3489189-3489208 None:intergenic 40.0%
CTTGAATTGCTTGCAGGAAA+AGG + chr7.2:3488193-3488212 MS.gene29313:CDS 40.0%
GATGAACTAGGATGTGTTAG+TGG + chr7.2:3488688-3488707 MS.gene29313:CDS 40.0%
GCTCAGAATGTAGCCAAATT+TGG + chr7.2:3488646-3488665 MS.gene29313:CDS 40.0%
GCTCTGTGTAGTAAATTGCA+GGG + chr7.2:3488751-3488770 MS.gene29313:CDS 40.0%
GGAACGACAATTACAGCAAA+AGG + chr7.2:3489240-3489259 MS.gene29313:CDS 40.0%
GTAAAGGCTTTCAAAACCAG+CGG - chr7.2:3487827-3487846 None:intergenic 40.0%
TAAAAGTGAGTCATGCGACA+AGG + chr7.2:3487442-3487461 MS.gene29313:intron 40.0%
TACACAGAGCATGAAGTTGT+AGG - chr7.2:3488741-3488760 None:intergenic 40.0%
TATGACAGTAGAGTGACTTG+TGG + chr7.2:3489198-3489217 MS.gene29313:CDS 40.0%
TCACCAAAGTTGAAAACTGC+TGG - chr7.2:3487775-3487794 None:intergenic 40.0%
TCTGAGTATATCAACTGGGA+TGG + chr7.2:3489276-3489295 MS.gene29313:CDS 40.0%
TGCTCTGTGTAGTAAATTGC+AGG + chr7.2:3488750-3488769 MS.gene29313:CDS 40.0%
TTCAAAACCAGCGGTAACAA+GGG - chr7.2:3487818-3487837 None:intergenic 40.0%
TTTCAAAACCAGCGGTAACA+AGG - chr7.2:3487819-3487838 None:intergenic 40.0%
! AAGTAGTTCTGTCCATAAGG+TGG - chr7.2:3486595-3486614 None:intergenic 40.0%
! ATCTTGGTTCTCTCTAGATC+AGG + chr7.2:3487416-3487435 MS.gene29313:intron 40.0%
! ATGACAGTAGAGTGACTTGT+GGG + chr7.2:3489199-3489218 MS.gene29313:CDS 40.0%
! CCTAGTTCATCAAGCTTTGA+TGG - chr7.2:3488679-3488698 None:intergenic 40.0%
! GCATTTTGTCTGAGAAAGGA+GGG - chr7.2:3489368-3489387 None:intergenic 40.0%
! TCACCTAAGTTGAAAACTGC+TGG - chr7.2:3486520-3486539 None:intergenic 40.0%
! TTTCAGCTTGTTCCACCTTA+TGG + chr7.2:3486580-3486599 MS.gene29313:CDS 40.0%
!! GGTTAAAGGTTTTAGCAGCT+TGG - chr7.2:3488720-3488739 None:intergenic 40.0%
!! GTATGTGTTTTAAGCCTTCC+AGG - chr7.2:3487641-3487660 None:intergenic 40.0%
!! TATACATATGATGGTGGCCA+TGG - chr7.2:3487692-3487711 None:intergenic 40.0%
ACCTGAATCCCAAAGGAGAA+AGG - chr7.2:3488142-3488161 None:intergenic 45.0%
AGGTGAACTTACAGTTGGGT+TGG + chr7.2:3486555-3486574 MS.gene29313:CDS 45.0%
ATGAGGGGGCTAGATATTTC+TGG + chr7.2:3488593-3488612 MS.gene29313:CDS 45.0%
ATGCACCAGCAAGATCATTC+TGG - chr7.2:3488376-3488395 None:intergenic 45.0%
ATGGCATGTTGTGGATATGG+AGG + chr7.2:3489162-3489181 MS.gene29313:CDS 45.0%
ATTGGCCAGAATGATCTTGC+TGG + chr7.2:3488368-3488387 MS.gene29313:CDS 45.0%
CCTGAATCCCAAAGGAGAAA+GGG - chr7.2:3488141-3488160 None:intergenic 45.0%
GAAAGCCTTTACCCACCAAA+TGG + chr7.2:3487835-3487854 MS.gene29313:intron 45.0%
GACACAGGTGAACTTACAGT+TGG + chr7.2:3486550-3486569 MS.gene29313:CDS 45.0%
GATACACAATACAGGTCCTC+TGG + chr7.2:3488615-3488634 MS.gene29313:CDS 45.0%
GGGAACACAAAGACCTTCAA+TGG + chr7.2:3489219-3489238 MS.gene29313:CDS 45.0%
GGTGAACTTACAGTTGGGTT+GGG + chr7.2:3486556-3486575 MS.gene29313:CDS 45.0%
GGTGATTCAAATTCCGACAC+CGG + chr7.2:3487790-3487809 MS.gene29313:intron 45.0%
GGTGATTCAAATTCGGACAC+AGG + chr7.2:3486535-3486554 MS.gene29313:CDS 45.0%
GTTGCATCACAGATTCTCAC+TGG + chr7.2:3489330-3489349 MS.gene29313:CDS 45.0%
GTTGTTTGCAGTGGATGCAT+TGG + chr7.2:3488000-3488019 MS.gene29313:intron 45.0%
TTGGAATGGAGGCAAGTACT+TGG - chr7.2:3488418-3488437 None:intergenic 45.0%
! AAATGGATGGATTCGGCACA+AGG - chr7.2:3487745-3487764 None:intergenic 45.0%
! GGCATTTTGTCTGAGAAAGG+AGG - chr7.2:3489369-3489388 None:intergenic 45.0%
! TGTGTCCATTTGGTGGGTAA+AGG - chr7.2:3487843-3487862 None:intergenic 45.0%
!! GTCTTGGTTGTTGTTTGCAG+TGG + chr7.2:3487991-3488010 MS.gene29313:intron 45.0%
!! ATAAAATAAAAATTATACTT+AGG - chr7.2:3486666-3486685 None:intergenic 5.0%
!! GTTAATAATTATAAATATAA+AGG + chr7.2:3486768-3486787 MS.gene29313:intron 5.0%
!! TAATATTAATAATCTATAAA+AGG - chr7.2:3486741-3486760 None:intergenic 5.0%
!!! CTTTTATTTTTTATTTTTTA+AGG - chr7.2:3487168-3487187 None:intergenic 5.0%
AACAATGAGACGGCCATCAC+AGG - chr7.2:3486638-3486657 None:intergenic 50.0%
CCATCAGGGAGATACTCTGA+TGG + chr7.2:3487877-3487896 MS.gene29313:intron 50.0%
CTGAGACACCTGAATCCCAA+AGG - chr7.2:3488149-3488168 None:intergenic 50.0%
GGTTGTAACTTTGCAGCAGC+TGG + chr7.2:3488079-3488098 MS.gene29313:CDS 50.0%
! CCATCAGAGTATCTCCCTGA+TGG - chr7.2:3487880-3487899 None:intergenic 50.0%
!! CCCTTTCTCCTTTGGGATTC+AGG + chr7.2:3488138-3488157 MS.gene29313:CDS 50.0%
CCAAATGGAAGGGCCTGTGA+TGG + chr7.2:3486622-3486641 MS.gene29313:CDS 55.0%
CCATCACAGGCCCTTCCATT+TGG - chr7.2:3486625-3486644 None:intergenic 55.0%
CCCAAAGGAGAAAGGGCAGA+GGG - chr7.2:3488134-3488153 None:intergenic 55.0%
CCCTCTGCCCTTTCTCCTTT+GGG + chr7.2:3488131-3488150 MS.gene29313:CDS 55.0%
CGCGCTCTTGAATTGCTTGC+AGG + chr7.2:3488187-3488206 MS.gene29313:CDS 55.0%
TCCCAAAGGAGAAAGGGCAG+AGG - chr7.2:3488135-3488154 None:intergenic 55.0%
TCCCTCTGCCCTTTCTCCTT+TGG + chr7.2:3488130-3488149 MS.gene29313:CDS 55.0%
TTCTGAGCCAAGCATCCCAG+AGG - chr7.2:3488634-3488653 None:intergenic 55.0%
!! GAGCGCGAGCTTTGAACTTG+AGG - chr7.2:3488174-3488193 None:intergenic 55.0%
!! TACAGGTCCTCTGGGATGCT+TGG + chr7.2:3488624-3488643 MS.gene29313:CDS 55.0%
AGGGCAGAGGGATGATGCAG+TGG - chr7.2:3488122-3488141 None:intergenic 60.0%
CAGAGGGATGATGCAGTGGC+TGG - chr7.2:3488118-3488137 None:intergenic 60.0%
GGGATGATGCAGTGGCTGGA+AGG - chr7.2:3488114-3488133 None:intergenic 60.0%
! ACCAGCGGTAACAAGGGTGC+CGG - chr7.2:3487812-3487831 None:intergenic 60.0%
!! GGTAACAAGGGTGCCGGTGT+CGG - chr7.2:3487806-3487825 None:intergenic 60.0%
ACCGGCACCCTTGTTACCGC+TGG + chr7.2:3487808-3487827 MS.gene29313:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 3486418 3489413 3486418 ID=MS.gene29313
chr7.2 mRNA 3486418 3489413 3486418 ID=MS.gene29313.t1;Parent=MS.gene29313
chr7.2 exon 3486418 3486667 3486418 ID=MS.gene29313.t1.exon1;Parent=MS.gene29313.t1
chr7.2 CDS 3486418 3486667 3486418 ID=cds.MS.gene29313.t1;Parent=MS.gene29313.t1
chr7.2 exon 3488011 3488214 3488011 ID=MS.gene29313.t1.exon2;Parent=MS.gene29313.t1
chr7.2 CDS 3488011 3488214 3488011 ID=cds.MS.gene29313.t1;Parent=MS.gene29313.t1
chr7.2 exon 3488303 3488469 3488303 ID=MS.gene29313.t1.exon3;Parent=MS.gene29313.t1
chr7.2 CDS 3488303 3488469 3488303 ID=cds.MS.gene29313.t1;Parent=MS.gene29313.t1
chr7.2 exon 3488583 3488853 3488583 ID=MS.gene29313.t1.exon4;Parent=MS.gene29313.t1
chr7.2 CDS 3488583 3488853 3488583 ID=cds.MS.gene29313.t1;Parent=MS.gene29313.t1
chr7.2 exon 3489145 3489413 3489145 ID=MS.gene29313.t1.exon5;Parent=MS.gene29313.t1
chr7.2 CDS 3489145 3489413 3489145 ID=cds.MS.gene29313.t1;Parent=MS.gene29313.t1
Gene Sequence

>MS.gene29313

ATGGCGGGTGATTCCAAGAATAATAATGTGCTTATTATTATTCATGTTGTGTTATTTTGCACATGTTTGGAAGTGGCAAATTCAGTTGAGTTCAATTTTCCAGCAGTTTTCAACTTAGGTGATTCAAATTCGGACACAGGTGAACTTACAGTTGGGTTGGGCTTTCAGCTTGTTCCACCTTATGGACAGAACTACTTCAAAACTCCAAATGGAAGGGCCTGTGATGGCCGTCTCATTGTTGACTTCCTAAGTATAATTTTTATTTTATATTTATCACTTTAAATTATAGTTTTTAAACTTTATAAATAACTATTTATCTGCCTTTTATAGATTATTAATATTAATTGTGAGTTAATAATTATAAATATAAAGGTTTAAATAACTTTGTTTTTTTAAAATAAAGGTTTAAATATTGTTTTCCAGTAAAAGAAATATGTTTTTTGTCCTTGCAACTTTTTTTTTTCTTTTTGGCCCTCTGTGTATCTTTTAGTTCCTGAAATATATTTTACATTGTAATTGACTTCATATGTAGAACATTTGATTTTAGTCCTTCCAAACATAATGACTAAAATGAATATTACACACATTATAAATTGGTAAATTTCAACATGAACAAATTTTACAAGGACTAAAAAACATCAAGGACCAATACTTTCAATTTGATTGGGCTAGTTTAACTTCTTACAAAAAATTGTATATTTGCAAGAATTAATGTATTTTTTTTACAGGACTAAAAGTAAATATGTTCCTTAAAAAATAAAAAATAAAAGTAAAATGTATTTGTAGGACCAAAAACATATTTAAATAAGATATAAATAAATTTGTAAATATGATTTATGATATAATATTATGGTGTAATTTGATACATGTAGCTGATCCTACTTAATGGAATAAAACTTGGTTGTTGTTGTGTAATCAACAATGCTTTTCTAAATATCATAACATAAATAAGGACATATGATAGGAGTTTAGGTAAGTATAATAATTTGGACAAAGGAATCTTGGTTCTCTCTAGATCAGGTTTTAAAAGTGAGTCATGCGACAAGGTGAGACCATCCAAATAGTGCAATGTTGTTGAATCAATAAACTTATAACAATGACTTGCTTGCACTACAAGTATGACCCACCAAACATACAAAGAAACATCAATTGTTAGATAGAAAAATAATGGATAGCTAACTGTACAGCAGAGCAGATCTATGTTTCAAAAACAAGCAAACCCTGGAAGGCTTAAAACACATACTTGCAGTAACAAATAATCAATTAATTAGCCATGGCCACCATCATATGTATAATTTGCATAATCACTACCATATTCTTATTACCTTGTGCCGAATCCATCCATTTAGATTTTCCAGCAGTTTTCAACTTTGGTGATTCAAATTCCGACACCGGCACCCTTGTTACCGCTGGTTTTGAAAGCCTTTACCCACCAAATGGACACACTTACTTTCATCTACCATCAGGGAGATACTCTGATGGCCGTCTCATCATTGATTTTCTTAGTAACAACTAAATCTCCGTAAATTAAAAAGTTTGCATTTTTTCTTCTTTTCATTTTCCTAATGATGTTGTCTTGGTTGTTGTTTGCAGTGGATGCATTGGATTTGCCATTCTTAAATGCATATTTGGATTCATTGGGTTTGCCAAATTTTAGGAAAGGTTGTAACTTTGCAGCAGCTGGTTCAACTATCCTTCCAGCCACTGCATCATCCCTCTGCCCTTTCTCCTTTGGGATTCAGGTGTCTCAGTTCCTCAAGTTCAAAGCTCGCGCTCTTGAATTGCTTGCAGGAAAAGGTATCTTCTACCACTAATTTAGTTTTGAATTTTTTAACAGAACAACTTTTTTTGCTGCAAATCTCATTCACTCTTTCAAGCATTTCAGGTAGAAAATTCGATAAGTATGTCCCGAGCGAAGATATTTTTGAGAAAGGATTATACATGTTTGACATTGGCCAGAATGATCTTGCTGGTGCATTTTATTCCAAAACTTTGGACCAAGTACTTGCCTCCATTCCAACAATTCTTTTAGAATTTGAATCTGGAATTAAGGTTGGTGTCAAATCATCTGCTTTCATTTTGTTTATTTTTGGCATAATACTATTCAAATATATTAAAACCATTAACATAAAAGAATTCTCATTCTTTGTTTTATTGTTTGATAGAGACTATATGATGAGGGGGCTAGATATTTCTGGATACACAATACAGGTCCTCTGGGATGCTTGGCTCAGAATGTAGCCAAATTTGGAACTGATCCATCAAAGCTTGATGAACTAGGATGTGTTAGTGGGCATAACCAAGCTGCTAAAACCTTTAACCTACAACTTCATGCTCTGTGTAGTAAATTGCAGGGTCAATATCCAGATTCAAATGTCACATATGTTGATATCTTCACTATAAAATCAAACCTCATTGCAAATTATTCTAGATACGGTTAGTAACTTGGCATATTACATTTATCTTTTTCACGGGTTTTTCCTTTAGAGTTTGTATTATGATTTTATACATATACATCGTCGGTGTAAAGATTTTTATGTTGTCAATAAATTATAATCATCACATTTGATTTTAATCATAACTGCTTCTAAAGTCCCACACGTATGATTGATTGTGATTTGTTGACACGATAAAACTTTTTTACACGAAGAGTGCATCAAAATTAAACTCTTTGTATAAATAACTTTTCCAAGAGTTGTTAAATTTGTAATATTTATATATTTGCAGGGTTTGAACAACCTATTATGGCATGTTGTGGATATGGAGGTCCACCATTGAACTATGACAGTAGAGTGACTTGTGGGAACACAAAGACCTTCAATGGAACGACAATTACAGCAAAAGGTTGTAATGACAGTTCTGAGTATATCAACTGGGATGGAATTCATTACACTGAGACTGCAAATCAATATGTTGCATCACAGATTCTCACTGGAAAATACTCTGACCCTCCTTTCTCAGACAAAATGCCATTCCTTCTCAAGCTCAAGTTCTAA
Protein sequence

>MS.gene29313.t1

MAGDSKNNNVLIIIHVVLFCTCLEVANSVEFNFPAVFNLGDSNSDTGELTVGLGFQLVPPYGQNYFKTPNGRACDGRLIVDFLMDALDLPFLNAYLDSLGLPNFRKGCNFAAAGSTILPATASSLCPFSFGIQVSQFLKFKARALELLAGKGRKFDKYVPSEDIFEKGLYMFDIGQNDLAGAFYSKTLDQVLASIPTILLEFESGIKRLYDEGARYFWIHNTGPLGCLAQNVAKFGTDPSKLDELGCVSGHNQAAKTFNLQLHALCSKLQGQYPDSNVTYVDIFTIKSNLIANYSRYGFEQPIMACCGYGGPPLNYDSRVTCGNTKTFNGTTITAKGCNDSSEYINWDGIHYTETANQYVASQILTGKYSDPPFSDKMPFLLKLKF