AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29354

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29354.t1 MTR_7g113180 96.673 1052 26 2 1 1052 1 1043 0.0 2077
MS.gene29354.t1 MTR_1g083170 39.359 686 216 25 380 1049 107 608 3.59e-96 320
MS.gene29354.t1 MTR_1g066890 34.637 179 97 2 95 273 318 476 1.97e-27 120
MS.gene29354.t1 MTR_2g104120 35.000 180 95 4 95 273 258 416 3.87e-26 116
MS.gene29354.t1 MTR_1g049120 33.514 185 107 4 95 272 290 465 4.42e-25 113
MS.gene29354.t1 MTR_1g072780 35.948 153 96 2 95 247 362 512 2.08e-24 110
MS.gene29354.t1 MTR_4g036445 33.514 185 107 5 95 272 314 489 2.32e-24 109
MS.gene29354.t1 MTR_2g104980 40.000 100 60 0 95 194 233 332 1.34e-20 96.7
MS.gene29354.t1 MTR_6g005840 44.444 90 49 1 95 184 272 360 1.36e-20 98.6
MS.gene29354.t1 MTR_6g005840 44.444 90 49 1 95 184 230 318 1.43e-20 98.6
MS.gene29354.t1 MTR_6g005960 39.806 103 61 1 82 184 199 300 5.81e-18 89.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29354.t1 AT5G27650 57.224 353 132 5 64 405 141 485 2.25e-112 374
MS.gene29354.t1 AT5G27650 39.486 428 179 13 627 1038 623 986 2.15e-60 225
MS.gene29354.t1 AT3G05430 50.278 360 161 7 65 414 104 455 2.97e-101 341
MS.gene29354.t1 AT3G05430 35.000 340 153 8 663 1000 621 894 4.98e-41 164
MS.gene29354.t1 AT3G05430 48.611 360 157 8 65 414 104 445 1.02e-94 323
MS.gene29354.t1 AT3G05430 35.000 340 153 8 663 1000 611 884 5.15e-41 164
MS.gene29354.t1 AT5G02950 32.222 180 108 2 99 272 99 270 9.55e-30 126
MS.gene29354.t1 AT5G02950 32.222 180 108 2 99 272 99 270 9.55e-30 126
MS.gene29354.t1 AT3G09670 28.736 174 122 2 99 272 201 372 6.75e-26 115
MS.gene29354.t1 AT3G09670 28.736 174 122 2 99 272 201 372 6.75e-26 115
MS.gene29354.t1 AT5G40340 46.078 102 55 0 93 194 123 224 4.77e-25 113
MS.gene29354.t1 AT5G40340 46.078 102 55 0 93 194 123 224 5.21e-25 113
MS.gene29354.t1 AT3G27860 44.068 118 60 3 77 192 47 160 3.73e-20 96.7
MS.gene29354.t1 AT3G27860 44.068 118 60 3 77 192 47 160 3.73e-20 96.7

Find 269 sgRNAs with CRISPR-Local

Find 377 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTAGATCCGTTTCGGTTTC+TGG 0.061756 7.2:-3945209 None:intergenic
TACCAAATCTGTTAAATTTA+AGG 0.077886 7.2:+3946837 MS.gene29354:CDS
ACTTACTTACTTCGGGAAAT+TGG 0.123727 7.2:+3948575 MS.gene29354:CDS
TCTCCTCCTTGTATGTTAAT+TGG 0.129476 7.2:-3946918 None:intergenic
CTGACCAATTGAAGCTTCTT+TGG 0.186433 7.2:-3947070 None:intergenic
AATCGGGTTTCCGCATATTT+TGG 0.198618 7.2:+3948450 MS.gene29354:CDS
GCTGTGGAAGAATAGGTTTC+TGG 0.219226 7.2:-3948703 None:intergenic
TTTAGACGTGCCACAACTTT+TGG 0.221763 7.2:+3947752 MS.gene29354:CDS
CTCCTTAAATTTAACAGATT+TGG 0.229138 7.2:-3946839 None:intergenic
GAGACTTATGCTCAGGCTTT+TGG 0.231229 7.2:+3945794 MS.gene29354:CDS
CTGAGATTTCTCCGCAAAAT+TGG 0.232296 7.2:-3945426 None:intergenic
TATCCATGGGCAGTAAATTA+TGG 0.234581 7.2:-3947713 None:intergenic
TGCATCTAAGTTGGTGGCTT+GGG 0.236450 7.2:-3947121 None:intergenic
GATCATCTCTCCGTTTAAAA+AGG 0.246066 7.2:-3946882 None:intergenic
TTGAAGTTGGCGATTTAGTT+TGG 0.255936 7.2:+3945240 MS.gene29354:CDS
CCTTTAGGAGGCTGTCTTGC+AGG 0.257462 7.2:-3945866 None:intergenic
TTCGTAGCCCTAAAATTATC+AGG 0.282970 7.2:-3945545 None:intergenic
CTTACTTACTTCGGGAAATT+GGG 0.289375 7.2:+3948576 MS.gene29354:CDS
TCTTTGCTGCAATTTCTTCT+TGG 0.293617 7.2:-3948070 None:intergenic
CGTGTAAAATTCATGTTAGT+TGG 0.309404 7.2:+3948818 MS.gene29354:CDS
CACACCTGTGGTACCGAATA+AGG 0.320831 7.2:-3948552 None:intergenic
CTTAACATCAGCAGTAGATT+TGG 0.322478 7.2:-3947934 None:intergenic
CTGCAAAAGCTGGGCGGAAA+AGG 0.332298 7.2:+3948033 MS.gene29354:CDS
TGAAGTTGGCGATTTAGTTT+GGG 0.334418 7.2:+3945241 MS.gene29354:CDS
CTCCTCCTTGTATGTTAATT+GGG 0.343453 7.2:-3946917 None:intergenic
TAGTTGGGGAAGAAAGTAAT+AGG 0.344071 7.2:+3948834 MS.gene29354:CDS
ATCCGTTTCGGTTTCTGGTT+CGG 0.345727 7.2:-3945204 None:intergenic
GCTTTATTTATTTCAGAATA+GGG 0.352179 7.2:+3946957 MS.gene29354:CDS
CATGTATTGGTTGCTTTCTT+CGG 0.358344 7.2:+3945353 MS.gene29354:CDS
AAGGCCAGGTTTGCTCGCTT+TGG 0.359307 7.2:+3948416 MS.gene29354:CDS
GTAGGAAACCCATCCTTATT+CGG 0.361708 7.2:+3948539 MS.gene29354:CDS
TTGCATCTAAGTTGGTGGCT+TGG 0.362163 7.2:-3947122 None:intergenic
GAAGAAAATCAAAGATATAA+AGG 0.364196 7.2:+3948097 MS.gene29354:CDS
GTCGATACAGAGAAATTTCC+CGG 0.368410 7.2:+3945122 MS.gene29354:CDS
TCAAGTAGATCTGATTTGTC+TGG 0.370286 7.2:+3947216 MS.gene29354:CDS
TCACAAACTTGGATGGAACT+TGG 0.370364 7.2:-3948286 None:intergenic
ATCTAAACTGCAAGAAGAAT+TGG 0.371286 7.2:-3947842 None:intergenic
TGCAAAAGCTGGGCGGAAAA+GGG 0.371402 7.2:+3948034 MS.gene29354:CDS
CATCTGAAGCTACAAAGGTT+AGG 0.372572 7.2:+3948606 MS.gene29354:CDS
GAAAGTTCAAGGTTATTATT+CGG 0.373617 7.2:+3945565 MS.gene29354:CDS
TTTACTACTACTTCCATTAC+CGG 0.374543 7.2:-3948786 None:intergenic
ACCATAACCTAGATCCGTTT+CGG 0.374966 7.2:-3945216 None:intergenic
GTGTAAAATTCATGTTAGTT+GGG 0.375120 7.2:+3948819 MS.gene29354:CDS
GTCCGATGCCGGTGCACCTT+CGG 0.378080 7.2:+3948901 MS.gene29354:CDS
AGGCTACGGTTTATGCTTAT+CGG 0.379837 7.2:+3945747 MS.gene29354:CDS
TTTCCCACCACCCAGAGTTT+CGG 0.381062 7.2:-3946809 None:intergenic
CACAGATGGAAGTGATGTTT+GGG 0.383630 7.2:-3948384 None:intergenic
GATTTGGTAACACGAACTTC+TGG 0.385076 7.2:-3947918 None:intergenic
CAAGCGACCTGCAGCTGACT+TGG 0.385555 7.2:+3947491 MS.gene29354:CDS
GAGAATTATCGTGTTGTGAT+TGG 0.388341 7.2:-3944977 None:intergenic
CCACAGATGGAAGTGATGTT+TGG 0.392516 7.2:-3948385 None:intergenic
AGCTTTATTTATTTCAGAAT+AGG 0.392725 7.2:+3946956 MS.gene29354:CDS
ACCGAAACGGATCTAGGTTA+TGG 0.395099 7.2:+3945215 MS.gene29354:CDS
TATTATCCTGTTCAAAGCTA+TGG 0.397350 7.2:-3947191 None:intergenic
CCAGAAACCGAAACGGATCT+AGG 0.397939 7.2:+3945209 MS.gene29354:CDS
AGTGTAGAGAAGAAGATAAA+AGG 0.400022 7.2:+3947465 MS.gene29354:CDS
TTGTGATGCTTTGCTTCAAC+TGG 0.400290 7.2:-3947438 None:intergenic
CACAAACTTGGATGGAACTT+GGG 0.401888 7.2:-3948285 None:intergenic
CCAAATGATCCTGCAAAAGC+TGG 0.402340 7.2:+3948023 MS.gene29354:CDS
GCTAGTAGAAGGCGAGGTCT+TGG 0.403637 7.2:+3945500 MS.gene29354:CDS
CTGTCTTGCAGGCTGATTGA+GGG 0.404536 7.2:-3945855 None:intergenic
TCAGGTCAGGGTACCGGTAA+TGG 0.404833 7.2:+3948773 MS.gene29354:CDS
ACAAAATCAAGAGTTTCAAT+TGG 0.405274 7.2:-3945662 None:intergenic
TACAGCGGTCGCGCCCTTCT+CGG 0.405682 7.2:+3945819 MS.gene29354:CDS
CCGGAGAAGCATTCTGCTCC+TGG 0.408168 7.2:+3947585 MS.gene29354:CDS
CGAGTCTGCTTTCACAAACT+TGG 0.408942 7.2:-3948297 None:intergenic
CTTTGGACCAATGGATCAAT+CGG 0.410796 7.2:+3948433 MS.gene29354:CDS
CTTGGACTCTTCTGTTATTG+AGG 0.411230 7.2:+3947509 MS.gene29354:CDS
CGAAGCTCGGCGAGAAGATA+AGG 0.414473 7.2:+3948205 MS.gene29354:CDS
GGAGCTTCATTCTCTGTTGG+TGG 0.421006 7.2:-3947897 None:intergenic
GCTGTCTTGCAGGCTGATTG+AGG 0.421058 7.2:-3945856 None:intergenic
GCAAAAGCTGGGCGGAAAAG+GGG 0.421081 7.2:+3948035 MS.gene29354:CDS
AAAAGACACACATCAAGTTA+AGG 0.426808 7.2:+3947401 MS.gene29354:CDS
TTTGAGAAATCCTAGGGTTA+GGG 0.427794 7.2:-3945022 None:intergenic
ACCTTCTCTAGGAGGCAAAC+TGG 0.427814 7.2:-3947655 None:intergenic
TGCAAAACCTCATCTTGAAA+AGG 0.429145 7.2:+3947140 MS.gene29354:CDS
GGAAAATCTGTACACTTGTC+AGG 0.430262 7.2:+3947606 MS.gene29354:CDS
ATCTGAAGCTACAAAGGTTA+GGG 0.430602 7.2:+3948607 MS.gene29354:CDS
GTTGGTTATAGCCGAAACTC+TGG 0.432059 7.2:+3946798 MS.gene29354:CDS
GTCGGCTGGACTGTCTTAGA+TGG 0.432316 7.2:-3948338 None:intergenic
TTCTTCGGTGATAGTAGTTA+CGG 0.433012 7.2:+3945368 MS.gene29354:CDS
GCAAAACCTCATCTTGAAAA+GGG 0.434160 7.2:+3947141 MS.gene29354:CDS
TCTTCAAGATGGACTTGAGC+TGG 0.434809 7.2:-3948733 None:intergenic
TACTGGTGATGAGTCAGGTC+AGG 0.435831 7.2:+3948760 MS.gene29354:CDS
TCTGGAGCTTCATTCTCTGT+TGG 0.441271 7.2:-3947900 None:intergenic
ATCCATGGGCAGTAAATTAT+GGG 0.444460 7.2:-3947712 None:intergenic
AACGACCCATAGCTTTGAAC+AGG 0.444914 7.2:+3947185 MS.gene29354:CDS
GTTTGCTCGCTTTGGACCAA+TGG 0.445412 7.2:+3948424 MS.gene29354:CDS
TCTACCTGCATTTGTTCTGA+TGG 0.446193 7.2:-3947681 None:intergenic
ACCAGTAGATTTCTTCAAGA+TGG 0.448858 7.2:-3948744 None:intergenic
CCAGGAGCAGAATGCTTCTC+CGG 0.449357 7.2:-3947585 None:intergenic
AAGAATTGGCGAACACCTAC+AGG 0.450336 7.2:-3947828 None:intergenic
TTTAGGGCTACGAAAGTTCA+AGG 0.450671 7.2:+3945554 MS.gene29354:CDS
ACAGCGGACGTCGGACCAAC+CGG 0.452258 7.2:+3947566 MS.gene29354:CDS
GAAGCTCTGACATGATCATT+AGG 0.454661 7.2:-3947969 None:intergenic
AAATCTCATCCATGGTGGCC+GGG 0.456568 7.2:+3945272 MS.gene29354:CDS
CAAAGAAGCTTCAATTGGTC+AGG 0.456790 7.2:+3947071 MS.gene29354:CDS
CTTGCTTTGAATCCTTTCCA+TGG 0.457487 7.2:+3947789 MS.gene29354:CDS
TAAATAAAGCTCAGCTGCAT+CGG 0.460748 7.2:-3946944 None:intergenic
AGGTGTGACTTACTTACTTC+GGG 0.461539 7.2:+3948568 MS.gene29354:CDS
TGGTCCAAAGCGAGCAAACC+TGG 0.461549 7.2:-3948420 None:intergenic
GACATCTCAATCATCCCATC+TGG 0.461931 7.2:+3947269 MS.gene29354:CDS
GGATCTTTCTTTCAATGCCA+TGG 0.462810 7.2:-3947806 None:intergenic
CAAGTAGATCTGATTTGTCT+GGG 0.463458 7.2:+3947217 MS.gene29354:CDS
TGATCACCAGTGTGGTCGGC+TGG 0.466779 7.2:-3948352 None:intergenic
AACCCTAACCCTAAAATCTT+CGG 0.467161 7.2:-3945078 None:intergenic
ACAAAGGTTAGGGGTGATGA+TGG 0.468885 7.2:+3948617 MS.gene29354:CDS
CTGTGGAAGAATAGGTTTCT+GGG 0.469316 7.2:-3948702 None:intergenic
GATTGCTTAATATCTTCGCA+TGG 0.470754 7.2:-3947345 None:intergenic
CGGAAACCCGATTGATCCAT+TGG 0.471513 7.2:-3948440 None:intergenic
TTAGAAAATCATGCTGACTC+AGG 0.472785 7.2:+3947009 MS.gene29354:CDS
CAAAGGTTAGGGGTGATGAT+GGG 0.477308 7.2:+3948618 MS.gene29354:CDS
GTCAGAAAACTTTCGAAGCT+CGG 0.479072 7.2:+3948192 MS.gene29354:CDS
GATGCCAAAGAAGCTTCAAT+TGG 0.480623 7.2:+3947066 MS.gene29354:CDS
AAATCTACTGGTGATGAGTC+AGG 0.481467 7.2:+3948755 MS.gene29354:CDS
AGTTGGGGAAGAAAGTAATA+GGG 0.483645 7.2:+3948835 MS.gene29354:CDS
GGAAGGAGCAAGTTCGTCTT+CGG 0.486455 7.2:-3945054 None:intergenic
GCTCCTCTTGATGGGGAGCA+TGG 0.486615 7.2:+3945701 MS.gene29354:CDS
TTACTCACCGGAGCTCCAGC+TGG 0.487083 7.2:-3944999 None:intergenic
AACATCTCCTAAGGTATCCA+TGG 0.487770 7.2:-3947727 None:intergenic
ATCGTTGGCTGTGGAAGAAT+AGG 0.489663 7.2:-3948710 None:intergenic
TATTAGTAAGAACATTCAAA+AGG 0.492727 7.2:+3948937 MS.gene29354:CDS
AAAGACACACATCAAGTTAA+GGG 0.493168 7.2:+3947402 MS.gene29354:CDS
TGAAGCTCGGCGTGAAGATA+AGG 0.494657 7.2:+3948160 MS.gene29354:CDS
CTGTTGATGAAGCTAGTAGA+AGG 0.494936 7.2:+3945489 MS.gene29354:CDS
AACCGAAGGTGCACCGGCAT+CGG 0.495035 7.2:-3948903 None:intergenic
TCTGAATCTCGACGAGAAGA+TGG 0.495920 7.2:+3948248 MS.gene29354:CDS
CAGGTGTGACTTACTTACTT+CGG 0.496469 7.2:+3948567 MS.gene29354:CDS
GTCTGTTTCTGAGCTACTGC+AGG 0.496824 7.2:-3948668 None:intergenic
TTCTCAGAATAAAACCCATC+AGG 0.497940 7.2:-3945608 None:intergenic
TTCTGAGAATCAGATTAAGA+AGG 0.497971 7.2:+3945622 MS.gene29354:CDS
AAATAAAGCTCAGCTGCATC+GGG 0.498015 7.2:-3946943 None:intergenic
GGCACATTCTGAGGCCGAGA+AGG 0.502586 7.2:-3945833 None:intergenic
TTGAGCTGGATCGTTGGCTG+TGG 0.502594 7.2:-3948719 None:intergenic
AGAATCAGATTAAGAAGGCT+AGG 0.503603 7.2:+3945627 MS.gene29354:CDS
GAAATCTCATCCATGGTGGC+CGG 0.505159 7.2:+3945271 MS.gene29354:CDS
TCAGGGTTTGTTAGTCATGA+TGG 0.505438 7.2:+3947027 MS.gene29354:CDS
AGCTCCTTTGAGTGGTCCGT+TGG 0.506024 7.2:+3946780 MS.gene29354:intron
CTGTGGCAGAACTGAAGGCC+AGG 0.507454 7.2:+3948402 MS.gene29354:CDS
GCCTTCAGTTCTGCCACAGA+TGG 0.507787 7.2:-3948398 None:intergenic
TCTGCTTTCACAAACTTGGA+TGG 0.511601 7.2:-3948293 None:intergenic
ATCAGAAAACTTCTGAAGCT+CGG 0.512308 7.2:+3948147 MS.gene29354:CDS
TCCGCAAAATTGGCTTCGAA+AGG 0.513897 7.2:-3945416 None:intergenic
TAATTCTCCAGCTGGAGCTC+CGG 0.514944 7.2:+3944992 MS.gene29354:CDS
TTACTGCCCATGGATACCTT+AGG 0.515913 7.2:+3947720 MS.gene29354:CDS
CAAAAGCTGGGCGGAAAAGG+GGG 0.515924 7.2:+3948036 MS.gene29354:CDS
CAATGAAACACCTCGGGTCA+AGG 0.516917 7.2:+3948643 MS.gene29354:CDS
TCCATCTGTGGCAGAACTGA+AGG 0.517407 7.2:+3948397 MS.gene29354:CDS
TCCATCTTGAAGAAATCTAC+TGG 0.518325 7.2:+3948743 MS.gene29354:CDS
TGCCCATAATTTACTGCCCA+TGG 0.518393 7.2:+3947710 MS.gene29354:CDS
GAAGAGTCCAAGTCAGCTGC+AGG 0.521306 7.2:-3947498 None:intergenic
TCTGATGGAATACCTTCTCT+AGG 0.522993 7.2:-3947666 None:intergenic
GAACTTCTGACTGTTGCTGA+TGG 0.529803 7.2:+3947375 MS.gene29354:CDS
ATTATCCTGTTCAAAGCTAT+GGG 0.531271 7.2:-3947190 None:intergenic
AATGCTAATTTGTCCGATGC+CGG 0.531706 7.2:+3948890 MS.gene29354:CDS
TGTCTTGCAGGCTGATTGAG+GGG 0.531974 7.2:-3945854 None:intergenic
TTTGGACCAATGGATCAATC+GGG 0.532806 7.2:+3948434 MS.gene29354:CDS
GGTAATGGAAGTAGTAGTAA+AGG 0.534718 7.2:+3948788 MS.gene29354:CDS
TCGAAAGGAATAAGCTCCGC+TGG 0.535232 7.2:-3945401 None:intergenic
TCATCAACAGTGCTTTGTAA+TGG 0.535752 7.2:-3947246 None:intergenic
GATGAGTCAGGTCAGGGTAC+CGG 0.535795 7.2:+3948767 MS.gene29354:CDS
CTCTTCCCAATTAACATACA+AGG 0.535801 7.2:+3946912 MS.gene29354:CDS
GGAGGCAAACTGGTTAAGAC+AGG 0.536659 7.2:-3947645 None:intergenic
TTGTATTCAGCTCCTTTGAG+TGG 0.537112 7.2:+3946772 MS.gene29354:intron
ACCCTAAAATCTTCGGAGGA+AGG 0.537170 7.2:-3945071 None:intergenic
TTACTTACTTCGGGAAATTG+GGG 0.537772 7.2:+3948577 MS.gene29354:CDS
TATTCCATCAGAACAAATGC+AGG 0.538179 7.2:+3947677 MS.gene29354:CDS
TGTAAAATTCATGTTAGTTG+GGG 0.538453 7.2:+3948820 MS.gene29354:CDS
CAAGTTTGTGAAAGCAGACT+CGG 0.538905 7.2:+3948298 MS.gene29354:CDS
TTTCTTTCAATGCCATGGAA+AGG 0.539813 7.2:-3947801 None:intergenic
ATTTCTTCTTGGCGATCAGA+AGG 0.540068 7.2:-3948059 None:intergenic
GCACATTCTGAGGCCGAGAA+GGG 0.541227 7.2:-3945832 None:intergenic
ACCAGTTTGCCTCCTAGAGA+AGG 0.543547 7.2:+3947654 MS.gene29354:CDS
CGGTGCACCTTCGGTTGCAA+TGG 0.543856 7.2:+3948910 MS.gene29354:CDS
CCTGCAAGACAGCCTCCTAA+AGG 0.544390 7.2:+3945866 MS.gene29354:CDS
AATCTCATCCATGGTGGCCG+GGG 0.544607 7.2:+3945273 MS.gene29354:CDS
CATTGCAACCGAAGGTGCAC+CGG 0.548338 7.2:-3948909 None:intergenic
ATGAGAATGTTAAACATGAC+AGG 0.548379 7.2:+3947304 MS.gene29354:CDS
TAGAAAATCATGCTGACTCA+GGG 0.550882 7.2:+3947010 MS.gene29354:CDS
CTTCTCGCGCGACGAACAGA+AGG 0.551043 7.2:-3945323 None:intergenic
TTGGATGGAACTTGGGACAC+AGG 0.551467 7.2:-3948278 None:intergenic
GAGAAGAGAAGGTCATGTAT+TGG 0.551711 7.2:+3945340 MS.gene29354:CDS
ATAGCCGAAACTCTGGGTGG+TGG 0.553138 7.2:+3946805 MS.gene29354:CDS
TGAGGAGGAGTGGGCAACAA+AGG 0.553544 7.2:-3948986 None:intergenic
CAAATGATCCTGCAAAAGCT+GGG 0.553891 7.2:+3948024 MS.gene29354:CDS
GCATCTAAGTTGGTGGCTTG+GGG 0.554532 7.2:-3947120 None:intergenic
GAGCAGAATGCTTCTCCGGT+TGG 0.554939 7.2:-3947581 None:intergenic
ATATGATGAGACTTATGCTC+AGG 0.556213 7.2:+3945787 MS.gene29354:CDS
TCTAAACTGCGAGGTATCAC+AGG 0.556643 7.2:-3946991 None:intergenic
GTTAATTGGGAAGAGTCACT+TGG 0.559916 7.2:-3946904 None:intergenic
CACCGAACCAGAAACCGAAA+CGG 0.560348 7.2:+3945202 MS.gene29354:CDS
GTCTAAATTAACATCTCCTA+AGG 0.562338 7.2:-3947736 None:intergenic
CTGCGAGGTATCACAGGCAC+AGG 0.563269 7.2:-3946985 None:intergenic
GTTCGTCGCGCGAGAAGAGA+AGG 0.563863 7.2:+3945329 MS.gene29354:CDS
TCGTAGCCCTAAAATTATCA+GGG 0.565000 7.2:-3945544 None:intergenic
ATTGCTTAATATCTTCGCAT+GGG 0.569846 7.2:-3947344 None:intergenic
CCTGTGGTACCGAATAAGGA+TGG 0.570020 7.2:-3948548 None:intergenic
TCGGTGATAGTAGTTACGGT+TGG 0.570918 7.2:+3945372 MS.gene29354:CDS
AAAGGTTAGGGGTGATGATG+GGG 0.571112 7.2:+3948619 MS.gene29354:CDS
GAAAAGTGAAATCTCATCCA+TGG 0.571316 7.2:+3945264 MS.gene29354:CDS
CAACACGATAATTCTCCAGC+TGG 0.571355 7.2:+3944984 MS.gene29354:CDS
CCAAACATCACTTCCATCTG+TGG 0.571905 7.2:+3948385 MS.gene29354:CDS
ATGGACTTGAGCTGGATCGT+TGG 0.573266 7.2:-3948725 None:intergenic
TGACAGGACTGCAAAACAGT+TGG 0.574315 7.2:+3947320 MS.gene29354:CDS
TATATATGCCCCGGCCACCA+TGG 0.576264 7.2:-3945281 None:intergenic
AGGAGCAAGTTCGTCTTCGG+AGG 0.576579 7.2:-3945051 None:intergenic
TGATTGAGGGGCACATTCTG+AGG 0.577290 7.2:-3945842 None:intergenic
CGAGGTATCACAGGCACAGG+TGG 0.579838 7.2:-3946982 None:intergenic
CCATCCTTATTCGGTACCAC+AGG 0.580715 7.2:+3948548 MS.gene29354:CDS
TTCTGCATCTGAAGCTACAA+AGG 0.581123 7.2:+3948601 MS.gene29354:CDS
TTCGAGAACATTTGTGAAAG+CGG 0.581677 7.2:+3945457 MS.gene29354:CDS
GAATCAGATTAAGAAGGCTA+GGG 0.585778 7.2:+3945628 MS.gene29354:CDS
AACTTGATCACCAGTGTGGT+CGG 0.586058 7.2:-3948356 None:intergenic
TTGGTTATAGCCGAAACTCT+GGG 0.587512 7.2:+3946799 MS.gene29354:CDS
TGCAAATCACCCAAAAGTTG+TGG 0.588456 7.2:-3947762 None:intergenic
TAGAAGGCGAGGTCTTGGAT+TGG 0.589476 7.2:+3945505 MS.gene29354:CDS
TAGCCGAAACTCTGGGTGGT+GGG 0.589975 7.2:+3946806 MS.gene29354:CDS
GCTTGATTGTATATATGCCC+CGG 0.593292 7.2:-3945290 None:intergenic
CGGTGAGTAACCCTAACCCT+AGG 0.593797 7.2:+3945012 MS.gene29354:CDS
TGGGGTCAATGAAACACCTC+GGG 0.594095 7.2:+3948637 MS.gene29354:CDS
TTACGGTTGGTTTGAACCAG+CGG 0.597722 7.2:+3945385 MS.gene29354:CDS
CTTCCATGCTCCCCATCAAG+AGG 0.599998 7.2:-3945704 None:intergenic
CTTCTGACTGTTGCTGATGG+AGG 0.600888 7.2:+3947378 MS.gene29354:CDS
GACAGTCCAGCCGACCACAC+TGG 0.601306 7.2:+3948346 MS.gene29354:CDS
ATGGGTCGTTTCTTCAGAGT+AGG 0.606145 7.2:-3947172 None:intergenic
GTGAATGATTATGAACCTGA+TGG 0.606868 7.2:+3945593 MS.gene29354:CDS
AAGAAGAAATTGCAGCAAAG+AGG 0.608117 7.2:+3948072 MS.gene29354:CDS
GAGAACATTTGTGAAAGCGG+TGG 0.608825 7.2:+3945460 MS.gene29354:CDS
GGGAAATTTCTCTGTATCGA+CGG 0.609776 7.2:-3945120 None:intergenic
GCTGGACTGTCTTAGATGGA+CGG 0.612669 7.2:-3948334 None:intergenic
AAGTAGATCTGATTTGTCTG+GGG 0.615546 7.2:+3947218 MS.gene29354:CDS
ATCGACGGTGGATGTATCGT+CGG 0.615609 7.2:-3945105 None:intergenic
ATAACCAACGGACCACTCAA+AGG 0.616663 7.2:-3946784 None:intergenic
CCTAACCCTAAAATCTTCGG+AGG 0.617182 7.2:-3945075 None:intergenic
ACATCTCCTAAGGTATCCAT+GGG 0.617356 7.2:-3947726 None:intergenic
GATGGAATACCTTCTCTAGG+AGG 0.621160 7.2:-3947663 None:intergenic
GAAGTTGGCGATTTAGTTTG+GGG 0.623248 7.2:+3945242 MS.gene29354:CDS
GTTGGGGAAGAAAGTAATAG+GGG 0.623695 7.2:+3948836 MS.gene29354:CDS
CAAAACCTCATCTTGAAAAG+GGG 0.624994 7.2:+3947142 MS.gene29354:CDS
GGAGGAGTGGGCAACAAAGG+TGG 0.626199 7.2:-3948983 None:intergenic
CTGTGGTACCGAATAAGGAT+GGG 0.628505 7.2:-3948547 None:intergenic
ATTGAAAGAAAGATCCCTGT+AGG 0.632396 7.2:+3947813 MS.gene29354:CDS
ATGGGGTCAATGAAACACCT+CGG 0.643385 7.2:+3948636 MS.gene29354:CDS
ATAAAATCCATTGCAACCGA+AGG 0.645376 7.2:-3948917 None:intergenic
ACTGGTGATGAGTCAGGTCA+GGG 0.651210 7.2:+3948761 MS.gene29354:CDS
AAGGGCGGTATACCTTTAGG+AGG 0.651306 7.2:-3945878 None:intergenic
TGGGGAAGAAAGTAATAGGG+GGG 0.652009 7.2:+3948838 MS.gene29354:CDS
TCTAAACTTACAGCGGACGT+CGG 0.652818 7.2:+3947557 MS.gene29354:CDS
GGTTTATGCTTATCGGAAAG+CGG 0.654176 7.2:+3945754 MS.gene29354:CDS
CAGGCTGAAGCAGCAAGCAG+TGG 0.654373 7.2:+3947090 MS.gene29354:CDS
GACGGTGGATGTATCGTCGG+AGG 0.655282 7.2:-3945102 None:intergenic
TTGATGACTTCCAAAATATG+CGG 0.661774 7.2:-3948460 None:intergenic
AGAGTTTCGGCTATAACCAA+CGG 0.662538 7.2:-3946796 None:intergenic
CTAGGGTTAGGGTTACTCAC+CGG 0.664188 7.2:-3945011 None:intergenic
TTGGGGAAGAAAGTAATAGG+GGG 0.665919 7.2:+3948837 MS.gene29354:CDS
GATGAAGCTAGTAGAAGGCG+AGG 0.666479 7.2:+3945494 MS.gene29354:CDS
AGAATTGGCGAACACCTACA+GGG 0.667650 7.2:-3947827 None:intergenic
TCTGAAGCTACAAAGGTTAG+GGG 0.669816 7.2:+3948608 MS.gene29354:CDS
AAATTTCTCTGTATCGACGG+TGG 0.670702 7.2:-3945117 None:intergenic
GATGGAAGTGATGTTTGGGG+AGG 0.673613 7.2:-3948380 None:intergenic
TGAATGATTATGAACCTGAT+GGG 0.680180 7.2:+3945594 MS.gene29354:CDS
ACTGCAGGATCCTTGACCCG+AGG 0.686114 7.2:-3948653 None:intergenic
ATGATCCTGCAAAAGCTGGG+CGG 0.711876 7.2:+3948027 MS.gene29354:CDS
AAGTGAAATCTCATCCATGG+TGG 0.716146 7.2:+3945267 MS.gene29354:CDS
TTCCCAATTAACATACAAGG+AGG 0.733188 7.2:+3946915 MS.gene29354:CDS
AGGAAACTTGATCACCAGTG+TGG 0.737006 7.2:-3948360 None:intergenic
GTTATAGCCGAAACTCTGGG+TGG 0.742888 7.2:+3946802 MS.gene29354:CDS
AAGTAAGTAAGTCACACCTG+TGG 0.764882 7.2:-3948564 None:intergenic
ACAGATGGAAGTGATGTTTG+GGG 0.789474 7.2:-3948383 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATACAAAAAAAAAAAGAAG+GGG - chr7.2:3946759-3946778 None:intergenic 15.0%
!! GAATACAAAAAAAAAAAGAA+GGG - chr7.2:3946760-3946779 None:intergenic 15.0%
!! TGAATACAAAAAAAAAAAGA+AGG - chr7.2:3946761-3946780 None:intergenic 15.0%
!! TTGTTATGTTTATTTATTAG+TGG + chr7.2:3946052-3946071 MS.gene29354:intron 15.0%
!!! AATTTTGTTTTGAAATTTTC+TGG + chr7.2:3946319-3946338 MS.gene29354:intron 15.0%
!!! GAATTATTTAGTTTTTGTTA+GGG + chr7.2:3945925-3945944 MS.gene29354:intron 15.0%
!!! TGAATTATTTAGTTTTTGTT+AGG + chr7.2:3945924-3945943 MS.gene29354:intron 15.0%
!! AAAAAAATCTAAACTTACAG+CGG + chr7.2:3947550-3947569 MS.gene29354:CDS 20.0%
!! ATTTAAGGAGAATTCAAAAA+AGG + chr7.2:3946852-3946871 MS.gene29354:CDS 20.0%
!! GAAGAAAATCAAAGATATAA+AGG + chr7.2:3948097-3948116 MS.gene29354:CDS 20.0%
!! TACCAAATCTGTTAAATTTA+AGG + chr7.2:3946837-3946856 MS.gene29354:CDS 20.0%
!! TATTTAAATACTTCTTTCTG+CGG + chr7.2:3945971-3945990 MS.gene29354:intron 20.0%
!!! AGCTTTATTTATTTCAGAAT+AGG + chr7.2:3946956-3946975 MS.gene29354:CDS 20.0%
!!! CATTAACAGAGATTTTTTAT+CGG - chr7.2:3945150-3945169 None:intergenic 20.0%
!!! GCTTTATTTATTTCAGAATA+GGG + chr7.2:3946957-3946976 MS.gene29354:CDS 20.0%
!!! TATTGATTTTGTTCAGAATA+AGG + chr7.2:3945727-3945746 MS.gene29354:CDS 20.0%
! ACAAAATCAAGAGTTTCAAT+TGG - chr7.2:3945665-3945684 None:intergenic 25.0%
! CGATAAAAAATCTCTGTTAA+TGG + chr7.2:3945148-3945167 MS.gene29354:CDS 25.0%
! CTCCTTAAATTTAACAGATT+TGG - chr7.2:3946842-3946861 None:intergenic 25.0%
! GAAAGTTCAAGGTTATTATT+CGG + chr7.2:3945565-3945584 MS.gene29354:CDS 25.0%
! GTGTAAAATTCATGTTAGTT+GGG + chr7.2:3948819-3948838 MS.gene29354:CDS 25.0%
! TACCATTAATAGTTCTTGAT+AGG + chr7.2:3946408-3946427 MS.gene29354:intron 25.0%
! TACCTATCAAGAACTATTAA+TGG - chr7.2:3946413-3946432 None:intergenic 25.0%
! TGTAAAATTCATGTTAGTTG+GGG + chr7.2:3948820-3948839 MS.gene29354:CDS 25.0%
! TTAACATATCTATAGAAGTG+CGG - chr7.2:3946654-3946673 None:intergenic 25.0%
!! ACTAAATTTTTGTAGATCCA+TGG + chr7.2:3946165-3946184 MS.gene29354:intron 25.0%
!! AGATCTAGCTTAAATATCTA+AGG - chr7.2:3946260-3946279 None:intergenic 25.0%
!! TAGAAACCCTGATAATTTTA+GGG + chr7.2:3945538-3945557 MS.gene29354:CDS 25.0%
!! TCTTGATTTTGTTAGAGATT+TGG + chr7.2:3945673-3945692 MS.gene29354:CDS 25.0%
!! TTTTTATTACCCACCATTAA+TGG - chr7.2:3948866-3948885 None:intergenic 25.0%
!!! AAATTTTCTGGTTGATATTC+TGG + chr7.2:3946331-3946350 MS.gene29354:intron 25.0%
!!! GTTTGGTAATGAAAAAATTG+AGG + chr7.2:3946455-3946474 MS.gene29354:intron 25.0%
!!! TTTGATTTTGAGAAATCCTA+GGG - chr7.2:3945031-3945050 None:intergenic 25.0%
AAAAGACACACATCAAGTTA+AGG + chr7.2:3947401-3947420 MS.gene29354:CDS 30.0%
AAAGACACACATCAAGTTAA+GGG + chr7.2:3947402-3947421 MS.gene29354:CDS 30.0%
AGGAGAATTCAAAAAAGGAT+AGG + chr7.2:3946857-3946876 MS.gene29354:CDS 30.0%
AGGTCTATTAAGAATGTGTT+GGG + chr7.2:3946505-3946524 MS.gene29354:intron 30.0%
AGTGTAGAGAAGAAGATAAA+AGG + chr7.2:3947465-3947484 MS.gene29354:CDS 30.0%
ATCAAATTGCTCAAAAACGA+AGG - chr7.2:3946140-3946159 None:intergenic 30.0%
ATCTAAACTGCAAGAAGAAT+TGG - chr7.2:3947845-3947864 None:intergenic 30.0%
ATGAGAATAAGACAGACAAT+AGG + chr7.2:3946550-3946569 MS.gene29354:intron 30.0%
ATGAGAATGTTAAACATGAC+AGG + chr7.2:3947304-3947323 MS.gene29354:CDS 30.0%
ATTATCCTGTTCAAAGCTAT+GGG - chr7.2:3947193-3947212 None:intergenic 30.0%
ATTGCTTAATATCTTCGCAT+GGG - chr7.2:3947347-3947366 None:intergenic 30.0%
CGTGTAAAATTCATGTTAGT+TGG + chr7.2:3948818-3948837 MS.gene29354:CDS 30.0%
GTCTAAATTAACATCTCCTA+AGG - chr7.2:3947739-3947758 None:intergenic 30.0%
TATTATCCTGTTCAAAGCTA+TGG - chr7.2:3947194-3947213 None:intergenic 30.0%
TCAACTGCTTTATAATCCAT+GGG - chr7.2:3946198-3946217 None:intergenic 30.0%
TGAATGATTATGAACCTGAT+GGG + chr7.2:3945594-3945613 MS.gene29354:CDS 30.0%
TTTACTACTACTTCCATTAC+CGG - chr7.2:3948789-3948808 None:intergenic 30.0%
! AGGATAGGTACCTTTTTAAA+CGG + chr7.2:3946872-3946891 MS.gene29354:CDS 30.0%
! ATAACTTTTACTCTCCAGAT+GGG - chr7.2:3947286-3947305 None:intergenic 30.0%
! ATCGTTGTGATTTTTATGCT+CGG + chr7.2:3946385-3946404 MS.gene29354:intron 30.0%
! ATGGATTATAAAGCAGTTGA+GGG + chr7.2:3946198-3946217 MS.gene29354:intron 30.0%
! GCTGCATATAAATTTTCTGT+AGG + chr7.2:3948521-3948540 MS.gene29354:CDS 30.0%
! GTAGAAACCCTGATAATTTT+AGG + chr7.2:3945537-3945556 MS.gene29354:CDS 30.0%
! TAACATATCTATAGAAGTGC+GGG - chr7.2:3946653-3946672 None:intergenic 30.0%
! TTCTGAGAATCAGATTAAGA+AGG + chr7.2:3945622-3945641 MS.gene29354:CDS 30.0%
! TTGATGACTTCCAAAATATG+CGG - chr7.2:3948463-3948482 None:intergenic 30.0%
! TTTTGTTCAGAATAAGGCTA+CGG + chr7.2:3945733-3945752 MS.gene29354:CDS 30.0%
!! GTTTGATTTTGAGAAATCCT+AGG - chr7.2:3945032-3945051 None:intergenic 30.0%
AAAAAATTGAGGCGCATCAA+TGG + chr7.2:3946466-3946485 MS.gene29354:intron 35.0%
AACCCTAACCCTAAAATCTT+CGG - chr7.2:3945081-3945100 None:intergenic 35.0%
AAGAAGAAATTGCAGCAAAG+AGG + chr7.2:3948072-3948091 MS.gene29354:CDS 35.0%
AATAATTCAGTACTTCCACC+AGG - chr7.2:3945913-3945932 None:intergenic 35.0%
ACCAGTAGATTTCTTCAAGA+TGG - chr7.2:3948747-3948766 None:intergenic 35.0%
ACTTACTTACTTCGGGAAAT+TGG + chr7.2:3948575-3948594 MS.gene29354:CDS 35.0%
AGAATCAGATTAAGAAGGCT+AGG + chr7.2:3945627-3945646 MS.gene29354:CDS 35.0%
AGTTGGGGAAGAAAGTAATA+GGG + chr7.2:3948835-3948854 MS.gene29354:CDS 35.0%
ATAAAATCCATTGCAACCGA+AGG - chr7.2:3948920-3948939 None:intergenic 35.0%
ATATGATGAGACTTATGCTC+AGG + chr7.2:3945787-3945806 MS.gene29354:CDS 35.0%
ATCCATGGGCAGTAAATTAT+GGG - chr7.2:3947715-3947734 None:intergenic 35.0%
ATGAGGGAAACAAATTGGTT+TGG + chr7.2:3946438-3946457 MS.gene29354:intron 35.0%
ATTGAAAGAAAGATCCCTGT+AGG + chr7.2:3947813-3947832 MS.gene29354:CDS 35.0%
CAAAACCTCATCTTGAAAAG+GGG + chr7.2:3947142-3947161 MS.gene29354:CDS 35.0%
CAGGTCTATTAAGAATGTGT+TGG + chr7.2:3946504-3946523 MS.gene29354:intron 35.0%
CTCAACTGCTTTATAATCCA+TGG - chr7.2:3946199-3946218 None:intergenic 35.0%
CTCCTCCTTGTATGTTAATT+GGG - chr7.2:3946920-3946939 None:intergenic 35.0%
CTCTTCCCAATTAACATACA+AGG + chr7.2:3946912-3946931 MS.gene29354:CDS 35.0%
CTTAACATCAGCAGTAGATT+TGG - chr7.2:3947937-3947956 None:intergenic 35.0%
CTTACTTACTTCGGGAAATT+GGG + chr7.2:3948576-3948595 MS.gene29354:CDS 35.0%
CTTGATAGGTATCAACATGA+GGG + chr7.2:3946422-3946441 MS.gene29354:intron 35.0%
GAAAAGTGAAATCTCATCCA+TGG + chr7.2:3945264-3945283 MS.gene29354:CDS 35.0%
GAATCAGATTAAGAAGGCTA+GGG + chr7.2:3945628-3945647 MS.gene29354:CDS 35.0%
GAGAATTATCGTGTTGTGAT+TGG - chr7.2:3944980-3944999 None:intergenic 35.0%
GATCATCTCTCCGTTTAAAA+AGG - chr7.2:3946885-3946904 None:intergenic 35.0%
GATTGCTTAATATCTTCGCA+TGG - chr7.2:3947348-3947367 None:intergenic 35.0%
GCAAAACCTCATCTTGAAAA+GGG + chr7.2:3947141-3947160 MS.gene29354:CDS 35.0%
GGAGTGATGTATAGTGTAAA+TGG + chr7.2:3945995-3946014 MS.gene29354:intron 35.0%
GGTCTATTAAGAATGTGTTG+GGG + chr7.2:3946506-3946525 MS.gene29354:intron 35.0%
GTGAATGATTATGAACCTGA+TGG + chr7.2:3945593-3945612 MS.gene29354:CDS 35.0%
TAAATAAAGCTCAGCTGCAT+CGG - chr7.2:3946947-3946966 None:intergenic 35.0%
TAGTTGGGGAAGAAAGTAAT+AGG + chr7.2:3948834-3948853 MS.gene29354:CDS 35.0%
TATCCATGGGCAGTAAATTA+TGG - chr7.2:3947716-3947735 None:intergenic 35.0%
TATTCCATCAGAACAAATGC+AGG + chr7.2:3947677-3947696 MS.gene29354:CDS 35.0%
TCAACATGAGGGAAACAAAT+TGG + chr7.2:3946433-3946452 MS.gene29354:intron 35.0%
TCATCAACAGTGCTTTGTAA+TGG - chr7.2:3947249-3947268 None:intergenic 35.0%
TCCATCTTGAAGAAATCTAC+TGG + chr7.2:3948743-3948762 MS.gene29354:CDS 35.0%
TCGTAGCCCTAAAATTATCA+GGG - chr7.2:3945547-3945566 None:intergenic 35.0%
TCTCCTCCTTGTATGTTAAT+TGG - chr7.2:3946921-3946940 None:intergenic 35.0%
TCTTGATAGGTATCAACATG+AGG + chr7.2:3946421-3946440 MS.gene29354:intron 35.0%
TCTTTGCTGCAATTTCTTCT+TGG - chr7.2:3948073-3948092 None:intergenic 35.0%
TGCAAAACCTCATCTTGAAA+AGG + chr7.2:3947140-3947159 MS.gene29354:CDS 35.0%
TGGATTATAAAGCAGTTGAG+GGG + chr7.2:3946199-3946218 MS.gene29354:intron 35.0%
TTAAATACTTCTTTCTGCGG+TGG + chr7.2:3945974-3945993 MS.gene29354:intron 35.0%
TTACTTACTTCGGGAAATTG+GGG + chr7.2:3948577-3948596 MS.gene29354:CDS 35.0%
TTCCCAATTAACATACAAGG+AGG + chr7.2:3946915-3946934 MS.gene29354:CDS 35.0%
TTCGAGAACATTTGTGAAAG+CGG + chr7.2:3945457-3945476 MS.gene29354:CDS 35.0%
TTCGTAGCCCTAAAATTATC+AGG - chr7.2:3945548-3945567 None:intergenic 35.0%
TTCTCAGAATAAAACCCATC+AGG - chr7.2:3945611-3945630 None:intergenic 35.0%
TTCTTCGGTGATAGTAGTTA+CGG + chr7.2:3945368-3945387 MS.gene29354:CDS 35.0%
TTGAAGTTGGCGATTTAGTT+TGG + chr7.2:3945240-3945259 MS.gene29354:CDS 35.0%
TTTCTTTCAATGCCATGGAA+AGG - chr7.2:3947804-3947823 None:intergenic 35.0%
TTTGAGAAATCCTAGGGTTA+GGG - chr7.2:3945025-3945044 None:intergenic 35.0%
! AACATATCTATAGAAGTGCG+GGG - chr7.2:3946652-3946671 None:intergenic 35.0%
! AAGTAGATCTGATTTGTCTG+GGG + chr7.2:3947218-3947237 MS.gene29354:CDS 35.0%
! AGATTCAGAAGTTTTCTGAC+TGG - chr7.2:3948237-3948256 None:intergenic 35.0%
! AGCTTCAGAAGTTTTCTGAT+TGG - chr7.2:3948147-3948166 None:intergenic 35.0%
! ATCTGAAGCTACAAAGGTTA+GGG + chr7.2:3948607-3948626 MS.gene29354:CDS 35.0%
! ATGAGGTTTTGCATCTAAGT+TGG - chr7.2:3947133-3947152 None:intergenic 35.0%
! CAAGTAGATCTGATTTGTCT+GGG + chr7.2:3947217-3947236 MS.gene29354:CDS 35.0%
! CATAACTTTTACTCTCCAGA+TGG - chr7.2:3947287-3947306 None:intergenic 35.0%
! CATGGATTATAAAGCAGTTG+AGG + chr7.2:3946197-3946216 MS.gene29354:intron 35.0%
! TCAAGTAGATCTGATTTGTC+TGG + chr7.2:3947216-3947235 MS.gene29354:CDS 35.0%
! TGAAGTTGGCGATTTAGTTT+GGG + chr7.2:3945241-3945260 MS.gene29354:CDS 35.0%
! TGTTTTACAGGTTTCACAAG+CGG - chr7.2:3947996-3948015 None:intergenic 35.0%
! TTTGGACGAACATGTTTTAC+AGG - chr7.2:3948008-3948027 None:intergenic 35.0%
!! ATCAGAAAACTTCTGAAGCT+CGG + chr7.2:3948147-3948166 MS.gene29354:CDS 35.0%
!! CATGTATTGGTTGCTTTCTT+CGG + chr7.2:3945353-3945372 MS.gene29354:CDS 35.0%
!! GGTAATGGAAGTAGTAGTAA+AGG + chr7.2:3948788-3948807 MS.gene29354:CDS 35.0%
!! TAGAAAATCATGCTGACTCA+GGG + chr7.2:3947010-3947029 MS.gene29354:CDS 35.0%
!! TTAGAAAATCATGCTGACTC+AGG + chr7.2:3947009-3947028 MS.gene29354:CDS 35.0%
!! TTTTGAGAAATCCTAGGGTT+AGG - chr7.2:3945026-3945045 None:intergenic 35.0%
!!! AGAGATTTTTTATCGGAACC+GGG - chr7.2:3945143-3945162 None:intergenic 35.0%
!!! CAGAGATTTTTTATCGGAAC+CGG - chr7.2:3945144-3945163 None:intergenic 35.0%
!!! CTAGGTTATGGTTTTGAAGT+TGG + chr7.2:3945227-3945246 MS.gene29354:CDS 35.0%
!!! GAGATGATGCTAAGCTTTTT+TGG - chr7.2:3947878-3947897 None:intergenic 35.0%
AAAAATACAGTCCAGCAGTC+AGG - chr7.2:3946106-3946125 None:intergenic 40.0%
AAATAAAGCTCAGCTGCATC+GGG - chr7.2:3946946-3946965 None:intergenic 40.0%
AAGTAAGTAAGTCACACCTG+TGG - chr7.2:3948567-3948586 None:intergenic 40.0%
AAGTGAAATCTCATCCATGG+TGG + chr7.2:3945267-3945286 MS.gene29354:CDS 40.0%
AATCCATGGGAAATTAGCCA+TGG - chr7.2:3946185-3946204 None:intergenic 40.0%
ACAGATGGAAGTGATGTTTG+GGG - chr7.2:3948386-3948405 None:intergenic 40.0%
ACCATAACCTAGATCCGTTT+CGG - chr7.2:3945219-3945238 None:intergenic 40.0%
AGAGTTTCGGCTATAACCAA+CGG - chr7.2:3946799-3946818 None:intergenic 40.0%
AGGCTACGGTTTATGCTTAT+CGG + chr7.2:3945747-3945766 MS.gene29354:CDS 40.0%
AGGTGTGACTTACTTACTTC+GGG + chr7.2:3948568-3948587 MS.gene29354:CDS 40.0%
AGTGGAGATATTTCCCTATC+CGG + chr7.2:3946070-3946089 MS.gene29354:intron 40.0%
ATTTCTTCTTGGCGATCAGA+AGG - chr7.2:3948062-3948081 None:intergenic 40.0%
CAAAGAAGCTTCAATTGGTC+AGG + chr7.2:3947071-3947090 MS.gene29354:CDS 40.0%
CAAATGATCCTGCAAAAGCT+GGG + chr7.2:3948024-3948043 MS.gene29354:CDS 40.0%
CAAGTTTGTGAAAGCAGACT+CGG + chr7.2:3948298-3948317 MS.gene29354:CDS 40.0%
CACAAACTTGGATGGAACTT+GGG - chr7.2:3948288-3948307 None:intergenic 40.0%
CACAGATGGAAGTGATGTTT+GGG - chr7.2:3948387-3948406 None:intergenic 40.0%
CAGGTGTGACTTACTTACTT+CGG + chr7.2:3948567-3948586 MS.gene29354:CDS 40.0%
CTGACCAATTGAAGCTTCTT+TGG - chr7.2:3947073-3947092 None:intergenic 40.0%
CTGAGATTTCTCCGCAAAAT+TGG - chr7.2:3945429-3945448 None:intergenic 40.0%
CTGTGGAAGAATAGGTTTCT+GGG - chr7.2:3948705-3948724 None:intergenic 40.0%
CTTGGACTCTTCTGTTATTG+AGG + chr7.2:3947509-3947528 MS.gene29354:CDS 40.0%
CTTTGGACCAATGGATCAAT+CGG + chr7.2:3948433-3948452 MS.gene29354:CDS 40.0%
GAATAAGACAGACAATAGGC+TGG + chr7.2:3946554-3946573 MS.gene29354:intron 40.0%
GAGAAGAGAAGGTCATGTAT+TGG + chr7.2:3945340-3945359 MS.gene29354:CDS 40.0%
GATGCCAAAGAAGCTTCAAT+TGG + chr7.2:3947066-3947085 MS.gene29354:CDS 40.0%
GCTTGATTGTATATATGCCC+CGG - chr7.2:3945293-3945312 None:intergenic 40.0%
GGAAAATCTGTACACTTGTC+AGG + chr7.2:3947606-3947625 MS.gene29354:CDS 40.0%
GGATCTTTCTTTCAATGCCA+TGG - chr7.2:3947809-3947828 None:intergenic 40.0%
GGGAAATTTCTCTGTATCGA+CGG - chr7.2:3945123-3945142 None:intergenic 40.0%
GGTTTATGCTTATCGGAAAG+CGG + chr7.2:3945754-3945773 MS.gene29354:CDS 40.0%
GTACTTCCACCAGGAAATTA+AGG - chr7.2:3945904-3945923 None:intergenic 40.0%
GTAGGAAACCCATCCTTATT+CGG + chr7.2:3948539-3948558 MS.gene29354:CDS 40.0%
GTCAGAAAACTTTCGAAGCT+CGG + chr7.2:3948192-3948211 MS.gene29354:CDS 40.0%
GTCGATACAGAGAAATTTCC+CGG + chr7.2:3945122-3945141 MS.gene29354:CDS 40.0%
GTTAATTGGGAAGAGTCACT+TGG - chr7.2:3946907-3946926 None:intergenic 40.0%
GTTGGGGAAGAAAGTAATAG+GGG + chr7.2:3948836-3948855 MS.gene29354:CDS 40.0%
TAGACCTGTCTTCATATTGC+AGG - chr7.2:3946492-3946511 None:intergenic 40.0%
TCACAAACTTGGATGGAACT+TGG - chr7.2:3948289-3948308 None:intergenic 40.0%
TCCACCAGGAAATTAAGGAA+GGG - chr7.2:3945899-3945918 None:intergenic 40.0%
TCTACCTGCATTTGTTCTGA+TGG - chr7.2:3947684-3947703 None:intergenic 40.0%
TCTGATGGAATACCTTCTCT+AGG - chr7.2:3947669-3947688 None:intergenic 40.0%
TCTGCTTTCACAAACTTGGA+TGG - chr7.2:3948296-3948315 None:intergenic 40.0%
TGCAAATCACCCAAAAGTTG+TGG - chr7.2:3947765-3947784 None:intergenic 40.0%
TTCCACCAGGAAATTAAGGA+AGG - chr7.2:3945900-3945919 None:intergenic 40.0%
TTGGGGAAGAAAGTAATAGG+GGG + chr7.2:3948837-3948856 MS.gene29354:CDS 40.0%
TTGGTTATAGCCGAAACTCT+GGG + chr7.2:3946799-3946818 MS.gene29354:CDS 40.0%
TTGTATTCAGCTCCTTTGAG+TGG + chr7.2:3946772-3946791 MS.gene29354:intron 40.0%
TTGTGATGCTTTGCTTCAAC+TGG - chr7.2:3947441-3947460 None:intergenic 40.0%
TTTGGACCAATGGATCAATC+GGG + chr7.2:3948434-3948453 MS.gene29354:CDS 40.0%
! AAATCTACTGGTGATGAGTC+AGG + chr7.2:3948755-3948774 MS.gene29354:CDS 40.0%
! AAATTTCTCTGTATCGACGG+TGG - chr7.2:3945120-3945139 None:intergenic 40.0%
! AACATCTCCTAAGGTATCCA+TGG - chr7.2:3947730-3947749 None:intergenic 40.0%
! AATCGGGTTTCCGCATATTT+TGG + chr7.2:3948450-3948469 MS.gene29354:CDS 40.0%
! AATGCTAATTTGTCCGATGC+CGG + chr7.2:3948890-3948909 MS.gene29354:CDS 40.0%
! ACATCTCCTAAGGTATCCAT+GGG - chr7.2:3947729-3947748 None:intergenic 40.0%
! AGCTTCGAAAGTTTTCTGAC+TGG - chr7.2:3948192-3948211 None:intergenic 40.0%
! CATCTGAAGCTACAAAGGTT+AGG + chr7.2:3948606-3948625 MS.gene29354:CDS 40.0%
! CTGTTGATGAAGCTAGTAGA+AGG + chr7.2:3945489-3945508 MS.gene29354:CDS 40.0%
! CTTGCTTTGAATCCTTTCCA+TGG + chr7.2:3947789-3947808 MS.gene29354:CDS 40.0%
! GAAGCTCTGACATGATCATT+AGG - chr7.2:3947972-3947991 None:intergenic 40.0%
! GACAAGTGTACAGATTTTCC+AGG - chr7.2:3947606-3947625 None:intergenic 40.0%
! GATTTGGTAACACGAACTTC+TGG - chr7.2:3947921-3947940 None:intergenic 40.0%
! GCATGATTTTCTAAACTGCG+AGG - chr7.2:3947003-3947022 None:intergenic 40.0%
! GTTTTACAGGTTTCACAAGC+GGG - chr7.2:3947995-3948014 None:intergenic 40.0%
! TCCTTCCTCCGAAGATTTTA+GGG + chr7.2:3945070-3945089 MS.gene29354:CDS 40.0%
! TCCTTTCGAAGCCAATTTTG+CGG + chr7.2:3945415-3945434 MS.gene29354:CDS 40.0%
! TCTGAAGCTACAAAGGTTAG+GGG + chr7.2:3948608-3948627 MS.gene29354:CDS 40.0%
! TTAGACGTGCCACAACTTTT+GGG + chr7.2:3947753-3947772 MS.gene29354:CDS 40.0%
! TTCAGAAGTTTTCTGACTGG+AGG - chr7.2:3948234-3948253 None:intergenic 40.0%
! TTCTGCATCTGAAGCTACAA+AGG + chr7.2:3948601-3948620 MS.gene29354:CDS 40.0%
! TTTAGACGTGCCACAACTTT+TGG + chr7.2:3947752-3947771 MS.gene29354:CDS 40.0%
! TTTAGGGCTACGAAAGTTCA+AGG + chr7.2:3945554-3945573 MS.gene29354:CDS 40.0%
! TTTTACAGGTTTCACAAGCG+GGG - chr7.2:3947994-3948013 None:intergenic 40.0%
!! AGGTTTTGCATCTAAGTTGG+TGG - chr7.2:3947130-3947149 None:intergenic 40.0%
!! ATCTTCCCCTTTTCAAGATG+AGG - chr7.2:3947150-3947169 None:intergenic 40.0%
!! GAAGTTGGCGATTTAGTTTG+GGG + chr7.2:3945242-3945261 MS.gene29354:CDS 40.0%
!! TCAGGGTTTGTTAGTCATGA+TGG + chr7.2:3947027-3947046 MS.gene29354:CDS 40.0%
!!! CTCCGAAGATTTTAGGGTTA+GGG + chr7.2:3945076-3945095 MS.gene29354:CDS 40.0%
AACTTGATCACCAGTGTGGT+CGG - chr7.2:3948359-3948378 None:intergenic 45.0%
AAGAATTGGCGAACACCTAC+AGG - chr7.2:3947831-3947850 None:intergenic 45.0%
ACAAAGGTTAGGGGTGATGA+TGG + chr7.2:3948617-3948636 MS.gene29354:CDS 45.0%
ACCAGGAAATTAAGGAAGGG+CGG - chr7.2:3945896-3945915 None:intergenic 45.0%
ACCCTAAAATCTTCGGAGGA+AGG - chr7.2:3945074-3945093 None:intergenic 45.0%
ACCGAAACGGATCTAGGTTA+TGG + chr7.2:3945215-3945234 MS.gene29354:CDS 45.0%
AGAATTGGCGAACACCTACA+GGG - chr7.2:3947830-3947849 None:intergenic 45.0%
AGGAAACTTGATCACCAGTG+TGG - chr7.2:3948363-3948382 None:intergenic 45.0%
ATAACCAACGGACCACTCAA+AGG - chr7.2:3946787-3946806 None:intergenic 45.0%
ATGGCCTGCAATATGAAGAC+AGG + chr7.2:3946485-3946504 MS.gene29354:intron 45.0%
ATGGGGTCAATGAAACACCT+CGG + chr7.2:3948636-3948655 MS.gene29354:CDS 45.0%
ATGGGTCGTTTCTTCAGAGT+AGG - chr7.2:3947175-3947194 None:intergenic 45.0%
CAAAGGTTAGGGGTGATGAT+GGG + chr7.2:3948618-3948637 MS.gene29354:CDS 45.0%
CAACACGATAATTCTCCAGC+TGG + chr7.2:3944984-3945003 MS.gene29354:CDS 45.0%
CCAAACATCACTTCCATCTG+TGG + chr7.2:3948385-3948404 MS.gene29354:CDS 45.0%
CCAAATGATCCTGCAAAAGC+TGG + chr7.2:3948023-3948042 MS.gene29354:CDS 45.0%
CCACAGATGGAAGTGATGTT+TGG - chr7.2:3948388-3948407 None:intergenic 45.0%
CCTAACCCTAAAATCTTCGG+AGG - chr7.2:3945078-3945097 None:intergenic 45.0%
CGAGTCTGCTTTCACAAACT+TGG - chr7.2:3948300-3948319 None:intergenic 45.0%
GAACTTCTGACTGTTGCTGA+TGG + chr7.2:3947375-3947394 MS.gene29354:CDS 45.0%
GACATCTCAATCATCCCATC+TGG + chr7.2:3947269-3947288 MS.gene29354:CDS 45.0%
GAGAACATTTGTGAAAGCGG+TGG + chr7.2:3945460-3945479 MS.gene29354:CDS 45.0%
GATCCATGGCTAATTTCCCA+TGG + chr7.2:3946179-3946198 MS.gene29354:intron 45.0%
GATGGAATACCTTCTCTAGG+AGG - chr7.2:3947666-3947685 None:intergenic 45.0%
GCTGTGGAAGAATAGGTTTC+TGG - chr7.2:3948706-3948725 None:intergenic 45.0%
GTGGAGATATTTCCCTATCC+GGG + chr7.2:3946071-3946090 MS.gene29354:intron 45.0%
GTTGGTTATAGCCGAAACTC+TGG + chr7.2:3946798-3946817 MS.gene29354:CDS 45.0%
TAATAGGGGGGAGCCATTAA+TGG + chr7.2:3948850-3948869 MS.gene29354:CDS 45.0%
TCGGTGATAGTAGTTACGGT+TGG + chr7.2:3945372-3945391 MS.gene29354:CDS 45.0%
TCTAAACTTACAGCGGACGT+CGG + chr7.2:3947557-3947576 MS.gene29354:CDS 45.0%
TCTGAATCTCGACGAGAAGA+TGG + chr7.2:3948248-3948267 MS.gene29354:CDS 45.0%
TGACAGGACTGCAAAACAGT+TGG + chr7.2:3947320-3947339 MS.gene29354:CDS 45.0%
TGCCCATAATTTACTGCCCA+TGG + chr7.2:3947710-3947729 MS.gene29354:CDS 45.0%
TGGGGAAGAAAGTAATAGGG+GGG + chr7.2:3948838-3948857 MS.gene29354:CDS 45.0%
TTACTGCCCATGGATACCTT+AGG + chr7.2:3947720-3947739 MS.gene29354:CDS 45.0%
! AAAGGTTAGGGGTGATGATG+GGG + chr7.2:3948619-3948638 MS.gene29354:CDS 45.0%
! ATCGTTGGCTGTGGAAGAAT+AGG - chr7.2:3948713-3948732 None:intergenic 45.0%
! CCAGCTTTTGCAGGATCATT+TGG - chr7.2:3948026-3948045 None:intergenic 45.0%
! CTCCTTCCTCCGAAGATTTT+AGG + chr7.2:3945069-3945088 MS.gene29354:CDS 45.0%
! CTGGTTAAGACAGGTTTTGC+TGG - chr7.2:3947639-3947658 None:intergenic 45.0%
! CTGTGGTACCGAATAAGGAT+GGG - chr7.2:3948550-3948569 None:intergenic 45.0%
! GAGACTTATGCTCAGGCTTT+TGG + chr7.2:3945794-3945813 MS.gene29354:CDS 45.0%
! TCCGCAAAATTGGCTTCGAA+AGG - chr7.2:3945419-3945438 None:intergenic 45.0%
! TCTAAACTGCGAGGTATCAC+AGG - chr7.2:3946994-3947013 None:intergenic 45.0%
! TCTGGAGCTTCATTCTCTGT+TGG - chr7.2:3947903-3947922 None:intergenic 45.0%
! TCTTCAAGATGGACTTGAGC+TGG - chr7.2:3948736-3948755 None:intergenic 45.0%
! TGGCTTTTGCTCCTCTTGAT+GGG + chr7.2:3945693-3945712 MS.gene29354:CDS 45.0%
!! AACGACCCATAGCTTTGAAC+AGG + chr7.2:3947185-3947204 MS.gene29354:CDS 45.0%
!! AGATGGACGGTCCATTTTTC+TGG - chr7.2:3948324-3948343 None:intergenic 45.0%
!! ATCCGTTTCGGTTTCTGGTT+CGG - chr7.2:3945207-3945226 None:intergenic 45.0%
!! TGCATCTAAGTTGGTGGCTT+GGG - chr7.2:3947124-3947143 None:intergenic 45.0%
!! TTACGGTTGGTTTGAACCAG+CGG + chr7.2:3945385-3945404 MS.gene29354:CDS 45.0%
!! TTGCATCTAAGTTGGTGGCT+TGG - chr7.2:3947125-3947144 None:intergenic 45.0%
!! TTGGCTTTTGCTCCTCTTGA+TGG + chr7.2:3945692-3945711 MS.gene29354:CDS 45.0%
!!! CCTCCGAAGATTTTAGGGTT+AGG + chr7.2:3945075-3945094 MS.gene29354:CDS 45.0%
AAATCTCATCCATGGTGGCC+GGG + chr7.2:3945272-3945291 MS.gene29354:CDS 50.0%
AAGGGCGGTATACCTTTAGG+AGG - chr7.2:3945881-3945900 None:intergenic 50.0%
ACCAGTTTGCCTCCTAGAGA+AGG + chr7.2:3947654-3947673 MS.gene29354:CDS 50.0%
ACCGCCCTTCCTTAATTTCC+TGG + chr7.2:3945892-3945911 MS.gene29354:intron 50.0%
AGCAGACTCGGCCAGAAAAA+TGG + chr7.2:3948310-3948329 MS.gene29354:CDS 50.0%
AGGAAGGGCGGTATACCTTT+AGG - chr7.2:3945884-3945903 None:intergenic 50.0%
AGGTGAACAAGTCCCGGATA+GGG - chr7.2:3946086-3946105 None:intergenic 50.0%
ATCGACGGTGGATGTATCGT+CGG - chr7.2:3945108-3945127 None:intergenic 50.0%
ATGATCCTGCAAAAGCTGGG+CGG + chr7.2:3948027-3948046 MS.gene29354:CDS 50.0%
ATGGACTTGAGCTGGATCGT+TGG - chr7.2:3948728-3948747 None:intergenic 50.0%
CAATGAAACACCTCGGGTCA+AGG + chr7.2:3948643-3948662 MS.gene29354:CDS 50.0%
CACCGAACCAGAAACCGAAA+CGG + chr7.2:3945202-3945221 MS.gene29354:CDS 50.0%
CCAGAAACCGAAACGGATCT+AGG + chr7.2:3945209-3945228 MS.gene29354:CDS 50.0%
CCATCCTTATTCGGTACCAC+AGG + chr7.2:3948548-3948567 MS.gene29354:CDS 50.0%
CCTAGATCCGTTTCGGTTTC+TGG - chr7.2:3945212-3945231 None:intergenic 50.0%
CGGAAACCCGATTGATCCAT+TGG - chr7.2:3948443-3948462 None:intergenic 50.0%
CTAGGGTTAGGGTTACTCAC+CGG - chr7.2:3945014-3945033 None:intergenic 50.0%
CTGTCTTGCAGGCTGATTGA+GGG - chr7.2:3945858-3945877 None:intergenic 50.0%
CTTCTGACTGTTGCTGATGG+AGG + chr7.2:3947378-3947397 MS.gene29354:CDS 50.0%
GAAATCTCATCCATGGTGGC+CGG + chr7.2:3945271-3945290 MS.gene29354:CDS 50.0%
GATGAAGCTAGTAGAAGGCG+AGG + chr7.2:3945494-3945513 MS.gene29354:CDS 50.0%
GATGGAAGTGATGTTTGGGG+AGG - chr7.2:3948383-3948402 None:intergenic 50.0%
GCCCTTCCTTAATTTCCTGG+TGG + chr7.2:3945895-3945914 MS.gene29354:intron 50.0%
GCTGGACTGTCTTAGATGGA+CGG - chr7.2:3948337-3948356 None:intergenic 50.0%
GGAAGGAGCAAGTTCGTCTT+CGG - chr7.2:3945057-3945076 None:intergenic 50.0%
GGAGCTTCATTCTCTGTTGG+TGG - chr7.2:3947900-3947919 None:intergenic 50.0%
GGAGGCAAACTGGTTAAGAC+AGG - chr7.2:3947648-3947667 None:intergenic 50.0%
GTTATAGCCGAAACTCTGGG+TGG + chr7.2:3946802-3946821 MS.gene29354:CDS 50.0%
TAATTCTCCAGCTGGAGCTC+CGG + chr7.2:3944992-3945011 MS.gene29354:CDS 50.0%
TAGAAGGCGAGGTCTTGGAT+TGG + chr7.2:3945505-3945524 MS.gene29354:CDS 50.0%
TCCATCTGTGGCAGAACTGA+AGG + chr7.2:3948397-3948416 MS.gene29354:CDS 50.0%
TCGAAAGGAATAAGCTCCGC+TGG - chr7.2:3945404-3945423 None:intergenic 50.0%
TGAAGCTCGGCGTGAAGATA+AGG + chr7.2:3948160-3948179 MS.gene29354:CDS 50.0%
TGCAAAAGCTGGGCGGAAAA+GGG + chr7.2:3948034-3948053 MS.gene29354:CDS 50.0%
TGGGGTCAATGAAACACCTC+GGG + chr7.2:3948637-3948656 MS.gene29354:CDS 50.0%
TGTCTTGCAGGCTGATTGAG+GGG - chr7.2:3945857-3945876 None:intergenic 50.0%
TTGGATGGAACTTGGGACAC+AGG - chr7.2:3948281-3948300 None:intergenic 50.0%
TTTCCCACCACCCAGAGTTT+CGG - chr7.2:3946812-3946831 None:intergenic 50.0%
! ACCTTCTCTAGGAGGCAAAC+TGG - chr7.2:3947658-3947677 None:intergenic 50.0%
! ACTGGTGATGAGTCAGGTCA+GGG + chr7.2:3948761-3948780 MS.gene29354:CDS 50.0%
! CACACCTGTGGTACCGAATA+AGG - chr7.2:3948555-3948574 None:intergenic 50.0%
! CCTGTGGTACCGAATAAGGA+TGG - chr7.2:3948551-3948570 None:intergenic 50.0%
! GGCTTTTGCTCCTCTTGATG+GGG + chr7.2:3945694-3945713 MS.gene29354:CDS 50.0%
! GTTTGCTCGCTTTGGACCAA+TGG + chr7.2:3948424-3948443 MS.gene29354:CDS 50.0%
! TACTGGTGATGAGTCAGGTC+AGG + chr7.2:3948760-3948779 MS.gene29354:CDS 50.0%
! TGATTGAGGGGCACATTCTG+AGG - chr7.2:3945845-3945864 None:intergenic 50.0%
!! GCATCTAAGTTGGTGGCTTG+GGG - chr7.2:3947123-3947142 None:intergenic 50.0%
!! GTCTGTTTCTGAGCTACTGC+AGG - chr7.2:3948671-3948690 None:intergenic 50.0%
!!! CTCAGGCTTTTGGAGTACAG+CGG + chr7.2:3945804-3945823 MS.gene29354:CDS 50.0%
AATCTCATCCATGGTGGCCG+GGG + chr7.2:3945273-3945292 MS.gene29354:CDS 55.0%
AGCTCCTTTGAGTGGTCCGT+TGG + chr7.2:3946780-3946799 MS.gene29354:intron 55.0%
AGGAGCAAGTTCGTCTTCGG+AGG - chr7.2:3945054-3945073 None:intergenic 55.0%
AGGGGGGAGCCATTAATGGT+GGG + chr7.2:3948854-3948873 MS.gene29354:CDS 55.0%
ATAGCCGAAACTCTGGGTGG+TGG + chr7.2:3946805-3946824 MS.gene29354:CDS 55.0%
CAAAAGCTGGGCGGAAAAGG+GGG + chr7.2:3948036-3948055 MS.gene29354:CDS 55.0%
CAGGTGAACAAGTCCCGGAT+AGG - chr7.2:3946087-3946106 None:intergenic 55.0%
CCAGGAGCAGAATGCTTCTC+CGG - chr7.2:3947588-3947607 None:intergenic 55.0%
CCTGCAAGACAGCCTCCTAA+AGG + chr7.2:3945866-3945885 MS.gene29354:CDS 55.0%
CGAAGCTCGGCGAGAAGATA+AGG + chr7.2:3948205-3948224 MS.gene29354:CDS 55.0%
CGGTGAGTAACCCTAACCCT+AGG + chr7.2:3945012-3945031 MS.gene29354:CDS 55.0%
CTGCAAAAGCTGGGCGGAAA+AGG + chr7.2:3948033-3948052 MS.gene29354:CDS 55.0%
CTTCCATGCTCCCCATCAAG+AGG - chr7.2:3945707-3945726 None:intergenic 55.0%
GAAGAGTCCAAGTCAGCTGC+AGG - chr7.2:3947501-3947520 None:intergenic 55.0%
GAGCAGAATGCTTCTCCGGT+TGG - chr7.2:3947584-3947603 None:intergenic 55.0%
GATGAGTCAGGTCAGGGTAC+CGG + chr7.2:3948767-3948786 MS.gene29354:CDS 55.0%
GCAAAAGCTGGGCGGAAAAG+GGG + chr7.2:3948035-3948054 MS.gene29354:CDS 55.0%
GCAGTCAGGTGAACAAGTCC+CGG - chr7.2:3946092-3946111 None:intergenic 55.0%
GCCTTCAGTTCTGCCACAGA+TGG - chr7.2:3948401-3948420 None:intergenic 55.0%
GCTAGTAGAAGGCGAGGTCT+TGG + chr7.2:3945500-3945519 MS.gene29354:CDS 55.0%
GCTGTCTTGCAGGCTGATTG+AGG - chr7.2:3945859-3945878 None:intergenic 55.0%
GTCGGCTGGACTGTCTTAGA+TGG - chr7.2:3948341-3948360 None:intergenic 55.0%
TAGCCGAAACTCTGGGTGGT+GGG + chr7.2:3946806-3946825 MS.gene29354:CDS 55.0%
TAGGGGGGAGCCATTAATGG+TGG + chr7.2:3948853-3948872 MS.gene29354:CDS 55.0%
TATATATGCCCCGGCCACCA+TGG - chr7.2:3945284-3945303 None:intergenic 55.0%
TGAGGAGGAGTGGGCAACAA+AGG - chr7.2:3948989-3949008 None:intergenic 55.0%
TGGTCCAAAGCGAGCAAACC+TGG - chr7.2:3948423-3948442 None:intergenic 55.0%
TTGTTGCCCACTCCTCCTCA+AGG + chr7.2:3948989-3949008 MS.gene29354:CDS 55.0%
! AAGGCCAGGTTTGCTCGCTT+TGG + chr7.2:3948416-3948435 MS.gene29354:CDS 55.0%
! CATTGCAACCGAAGGTGCAC+CGG - chr7.2:3948912-3948931 None:intergenic 55.0%
! CCTTTAGGAGGCTGTCTTGC+AGG - chr7.2:3945869-3945888 None:intergenic 55.0%
! CTTTTCCGCCCAGCTTTTGC+AGG - chr7.2:3948035-3948054 None:intergenic 55.0%
! GGACTTGTTCACCTGACTGC+TGG + chr7.2:3946092-3946111 MS.gene29354:intron 55.0%
! TTGAGCTGGATCGTTGGCTG+TGG - chr7.2:3948722-3948741 None:intergenic 55.0%
!! GCACATTCTGAGGCCGAGAA+GGG - chr7.2:3945835-3945854 None:intergenic 55.0%
!! TCAGGTCAGGGTACCGGTAA+TGG + chr7.2:3948773-3948792 MS.gene29354:CDS 55.0%
ACTGCAGGATCCTTGACCCG+AGG - chr7.2:3948656-3948675 None:intergenic 60.0%
CAAGCGACCTGCAGCTGACT+TGG + chr7.2:3947491-3947510 MS.gene29354:CDS 60.0%
CAGGCTGAAGCAGCAAGCAG+TGG + chr7.2:3947090-3947109 MS.gene29354:CDS 60.0%
CGGTGCACCTTCGGTTGCAA+TGG + chr7.2:3948910-3948929 MS.gene29354:CDS 60.0%
CTGTGGCAGAACTGAAGGCC+AGG + chr7.2:3948402-3948421 MS.gene29354:CDS 60.0%
CTTCTCGCGCGACGAACAGA+AGG - chr7.2:3945326-3945345 None:intergenic 60.0%
GACGGTGGATGTATCGTCGG+AGG - chr7.2:3945105-3945124 None:intergenic 60.0%
GCTCCTCTTGATGGGGAGCA+TGG + chr7.2:3945701-3945720 MS.gene29354:CDS 60.0%
GGAGGAGTGGGCAACAAAGG+TGG - chr7.2:3948986-3949005 None:intergenic 60.0%
GTTCGTCGCGCGAGAAGAGA+AGG + chr7.2:3945329-3945348 MS.gene29354:CDS 60.0%
TGATCACCAGTGTGGTCGGC+TGG - chr7.2:3948355-3948374 None:intergenic 60.0%
TTACTCACCGGAGCTCCAGC+TGG - chr7.2:3945002-3945021 None:intergenic 60.0%
! AACCGAAGGTGCACCGGCAT+CGG - chr7.2:3948906-3948925 None:intergenic 60.0%
! CGAGGTATCACAGGCACAGG+TGG - chr7.2:3946985-3947004 None:intergenic 60.0%
! CTGCGAGGTATCACAGGCAC+AGG - chr7.2:3946988-3947007 None:intergenic 60.0%
!! CCGGAGAAGCATTCTGCTCC+TGG + chr7.2:3947585-3947604 MS.gene29354:CDS 60.0%
!! GGCACATTCTGAGGCCGAGA+AGG - chr7.2:3945836-3945855 None:intergenic 60.0%
ACAGCGGACGTCGGACCAAC+CGG + chr7.2:3947566-3947585 MS.gene29354:CDS 65.0%
GACAGTCCAGCCGACCACAC+TGG + chr7.2:3948346-3948365 MS.gene29354:CDS 65.0%
GTCCGATGCCGGTGCACCTT+CGG + chr7.2:3948901-3948920 MS.gene29354:CDS 65.0%
TACAGCGGTCGCGCCCTTCT+CGG + chr7.2:3945819-3945838 MS.gene29354:CDS 65.0%


Chromosome Type Strat End Strand Name
chr7.2 gene 3944957 3949008 3944957 ID=MS.gene29354
chr7.2 mRNA 3944957 3949008 3944957 ID=MS.gene29354.t1;Parent=MS.gene29354
chr7.2 exon 3944957 3945887 3944957 ID=MS.gene29354.t1.exon1;Parent=MS.gene29354.t1
chr7.2 CDS 3944957 3945887 3944957 ID=cds.MS.gene29354.t1;Parent=MS.gene29354.t1
chr7.2 exon 3946782 3949008 3946782 ID=MS.gene29354.t1.exon2;Parent=MS.gene29354.t1
chr7.2 CDS 3946782 3949008 3946782 ID=cds.MS.gene29354.t1;Parent=MS.gene29354.t1
Gene Sequence

>MS.gene29354

ATGAGCGACTCTTCTCGATTCCAATCACAACACGATAATTCTCCAGCTGGAGCTCCGGTGAGTAACCCTAACCCTAGGATTTCTCAAAATCAAACCTCCGAAGACGAACTTGCTCCTTCCTCCGAAGATTTTAGGGTTAGGGTTTCCTCCGACGATACATCCACCGTCGATACAGAGAAATTTCCCGGTTCCGATAAAAAATCTCTGTTAATGGAATTCGATGAATACGTAGCTTCAGAGAGAAACACCGAACCAGAAACCGAAACGGATCTAGGTTATGGTTTTGAAGTTGGCGATTTAGTTTGGGGAAAAGTGAAATCTCATCCATGGTGGCCGGGGCATATATACAATCAAGCATTTGCATCACCTTCTGTTCGTCGCGCGAGAAGAGAAGGTCATGTATTGGTTGCTTTCTTCGGTGATAGTAGTTACGGTTGGTTTGAACCAGCGGAGCTTATTCCTTTCGAAGCCAATTTTGCGGAGAAATCTCAGCAGACGTATTCGAGAACATTTGTGAAAGCGGTGGAAGAAGCTGTTGATGAAGCTAGTAGAAGGCGAGGTCTTGGATTGGCTTGTAAGTGTAGAAACCCTGATAATTTTAGGGCTACGAAAGTTCAAGGTTATTATTCGGTTGATGTGAATGATTATGAACCTGATGGGTTTTATTCTGAGAATCAGATTAAGAAGGCTAGGGATAGTTTTAATCCAATTGAAACTCTTGATTTTGTTAGAGATTTGGCTTTTGCTCCTCTTGATGGGGAGCATGGAAGTATTGATTTTGTTCAGAATAAGGCTACGGTTTATGCTTATCGGAAAGCGGTGTTTGAGCAATATGATGAGACTTATGCTCAGGCTTTTGGAGTACAGCGGTCGCGCCCTTCTCGGCCTCAGAATGTGCCCCTCAATCAGCCTGCAAGACAGCCTCCTAAAGGTATACCGCCCTTCCTTAATTTCCTGGTGGAAGTACTGAATTATTTAGTTTTTGTTAGGGTCTTATTGTAGAATTAGCTGTAGTATTTAAATACTTCTTTCTGCGGTGGAGTGATGTATAGTGTAAATGGAGAATAGATTGACGCAATACAAATAAGATACTTGTTGTTATGTTTATTTATTAGTGGAGATATTTCCCTATCCGGGACTTGTTCACCTGACTGCTGGACTGTATTTTTGTATTTCAGTACCTTCGTTTTTGAGCAATTTGATTGATGACTAAATTTTTGTAGATCCATGGCTAATTTCCCATGGATTATAAAGCAGTTGAGGGGATAAAAATATGCATGTATTATGACTTAATACATGTCCTTAGATATTTAAGCTAGATCTGAAGTTAAATTACAAGTGTTTATACATAGTTTGACTCTAAATTTTGTTTTGAAATTTTCTGGTTGATATTCTGGAGATATGATAACATCAAAAAAGAAAAATTGAATCGTTGTGATTTTTATGCTCGGTACCATTAATAGTTCTTGATAGGTATCAACATGAGGGAAACAAATTGGTTTGGTAATGAAAAAATTGAGGCGCATCAATGGCCTGCAATATGAAGACAGGTCTATTAAGAATGTGTTGGGGAAAGTTAAGTAGCTCTCATTGATGAGAATAAGACAGACAATAGGCTGGTCTATTTGCATTTTATAAGCTTGTGTTAATTTAAACATAAATAAGTTCACATTTTAAGCTTTTGTAATTTATCCCCGCACTTCTATAGATATGTTAATCTTCTTTTTTTAATGAATAACGATCTTACTGTTGTTTCTCAATCTACTCAAAAGCAGCTGCGTATGTTAATGCTACTTTTTCCCCTTCTTTTTTTTTTTGTATTCAGCTCCTTTGAGTGGTCCGTTGGTTATAGCCGAAACTCTGGGTGGTGGGAAAAGCGCTACCAAATCTGTTAAATTTAAGGAGAATTCAAAAAAGGATAGGTACCTTTTTAAACGGAGAGATGATCCAAGTGACTCTTCCCAATTAACATACAAGGAGGAGATACCCGATGCAGCTGAGCTTTATTTATTTCAGAATAGGGCTCCACCTGTGCCTGTGATACCTCGCAGTTTAGAAAATCATGCTGACTCAGGGTTTGTTAGTCATGATGGTGCAACTTCAACTTCAGATGCCAAAGAAGCTTCAATTGGTCAGGCTGAAGCAGCAAGCAGTGGTCTTACACCCCAAGCCACCAACTTAGATGCAAAACCTCATCTTGAAAAGGGGAAGATTGCCTACTCTGAAGAAACGACCCATAGCTTTGAACAGGATAATATTTCAAGTAGATCTGATTTGTCTGGGGAGTTACCATTACAAAGCACTGTTGATGAGACATCTCAATCATCCCATCTGGAGAGTAAAAGTTATGAGAATGTTAAACATGACAGGACTGCAAAACAGTTGGACCCATGCGAAGATATTAAGCAATCAGAGCAAGAACTTCTGACTGTTGCTGATGGAGGAAAAGACACACATCAAGTTAAGGGCGAAATTAGTTTACCAGTTGAAGCAAAGCATCACAAAATTAGTGTAGAGAAGAAGATAAAAGGTCACAAGCGACCTGCAGCTGACTTGGACTCTTCTGTTATTGAGGAGAGAATGAAAAAAAAGAAAAAAAATCTAAACTTACAGCGGACGTCGGACCAACCGGAGAAGCATTCTGCTCCTGGAAAATCTGTACACTTGTCAGGAAATTTACCAGCAAAACCTGTCTTAACCAGTTTGCCTCCTAGAGAAGGTATTCCATCAGAACAAATGCAGGTAGATTTTGCTGCCCATAATTTACTGCCCATGGATACCTTAGGAGATGTTAATTTAGACGTGCCACAACTTTTGGGTGATTTGCAAGCTCTTGCTTTGAATCCTTTCCATGGCATTGAAAGAAAGATCCCTGTAGGTGTTCGCCAATTCTTCTTGCAGTTTAGATCTCTTGTTTACCAAAAAAGCTTAGCATCATCTCCACCAACAGAGAATGAAGCTCCAGAAGTTCGTGTTACCAAATCTACTGCTGATGTTAAGATATCTGACAATCCTAATGATCATGTCAGAGCTTCCCCGCTTGTGAAACCTGTAAAACATGTTCGTCCAAATGATCCTGCAAAAGCTGGGCGGAAAAGGGGGCCTTCTGATCGCCAAGAAGAAATTGCAGCAAAGAGGTTGAAGAAAATCAAAGATATAAAGGCACTAGCTGCTGATAAGACAGCTGCCAATCAGAAAACTTCTGAAGCTCGGCGTGAAGATAAGGCAGCTTCCAGTCAGAAAACTTTCGAAGCTCGGCGAGAAGATAAGGCAGCCTCCAGTCAGAAAACTTCTGAATCTCGACGAGAAGATGGTAAAGAACCTGTGTCCCAAGTTCCATCCAAGTTTGTGAAAGCAGACTCGGCCAGAAAAATGGACCGTCCATCTAAGACAGTCCAGCCGACCACACTGGTGATCAAGTTTCCTCCCCAAACATCACTTCCATCTGTGGCAGAACTGAAGGCCAGGTTTGCTCGCTTTGGACCAATGGATCAATCGGGTTTCCGCATATTTTGGAAGTCATCAACTTGTCGTGTTGTTTTCTTGTACAAGAGTGATGCACAAGCTGCATATAAATTTTCTGTAGGAAACCCATCCTTATTCGGTACCACAGGTGTGACTTACTTACTTCGGGAAATTGGGGATTCTGCATCTGAAGCTACAAAGGTTAGGGGTGATGATGGGGTCAATGAAACACCTCGGGTCAAGGATCCTGCAGTAGCTCAGAAACAGACATCAGTTTCATCCCAGAAACCTATTCTTCCACAGCCAACGATCCAGCTCAAGTCCATCTTGAAGAAATCTACTGGTGATGAGTCAGGTCAGGGTACCGGTAATGGAAGTAGTAGTAAAGGAAACTCACGTGTAAAATTCATGTTAGTTGGGGAAGAAAGTAATAGGGGGGAGCCATTAATGGTGGGTAATAAAAACAACAATGCTAATTTGTCCGATGCCGGTGCACCTTCGGTTGCAATGGATTTTATTAGTAAGAACATTCAAAAGGTCACAACTACTACTTCTTCACAACCACCTTTGTTGCCCACTCCTCCTCA
Protein sequence

>MS.gene29354.t1

MSDSSRFQSQHDNSPAGAPVSNPNPRISQNQTSEDELAPSSEDFRVRVSSDDTSTVDTEKFPGSDKKSLLMEFDEYVASERNTEPETETDLGYGFEVGDLVWGKVKSHPWWPGHIYNQAFASPSVRRARREGHVLVAFFGDSSYGWFEPAELIPFEANFAEKSQQTYSRTFVKAVEEAVDEASRRRGLGLACKCRNPDNFRATKVQGYYSVDVNDYEPDGFYSENQIKKARDSFNPIETLDFVRDLAFAPLDGEHGSIDFVQNKATVYAYRKAVFEQYDETYAQAFGVQRSRPSRPQNVPLNQPARQPPKAPLSGPLVIAETLGGGKSATKSVKFKENSKKDRYLFKRRDDPSDSSQLTYKEEIPDAAELYLFQNRAPPVPVIPRSLENHADSGFVSHDGATSTSDAKEASIGQAEAASSGLTPQATNLDAKPHLEKGKIAYSEETTHSFEQDNISSRSDLSGELPLQSTVDETSQSSHLESKSYENVKHDRTAKQLDPCEDIKQSEQELLTVADGGKDTHQVKGEISLPVEAKHHKISVEKKIKGHKRPAADLDSSVIEERMKKKKKNLNLQRTSDQPEKHSAPGKSVHLSGNLPAKPVLTSLPPREGIPSEQMQVDFAAHNLLPMDTLGDVNLDVPQLLGDLQALALNPFHGIERKIPVGVRQFFLQFRSLVYQKSLASSPPTENEAPEVRVTKSTADVKISDNPNDHVRASPLVKPVKHVRPNDPAKAGRKRGPSDRQEEIAAKRLKKIKDIKALAADKTAANQKTSEARREDKAASSQKTFEARREDKAASSQKTSESRREDGKEPVSQVPSKFVKADSARKMDRPSKTVQPTTLVIKFPPQTSLPSVAELKARFARFGPMDQSGFRIFWKSSTCRVVFLYKSDAQAAYKFSVGNPSLFGTTGVTYLLREIGDSASEATKVRGDDGVNETPRVKDPAVAQKQTSVSSQKPILPQPTIQLKSILKKSTGDESGQGTGNGSSSKGNSRVKFMLVGEESNRGEPLMVGNKNNNANLSDAGAPSVAMDFISKNIQKVTTTTSSQPPLLPTPP