AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene29840

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29840.t1 MTR_3g074130 98.058 206 3 1 1 205 135 340 8.36e-150 419
MS.gene29840.t1 MTR_5g062700 57.477 214 71 4 6 205 164 371 4.95e-71 220
MS.gene29840.t1 MTR_8g090350 54.976 211 65 7 1 205 100 286 9.12e-65 201
MS.gene29840.t1 MTR_1g090170 48.366 153 65 5 13 157 150 296 7.45e-38 133
MS.gene29840.t1 MTR_1g090170 63.107 103 29 3 13 112 237 333 2.14e-37 134
MS.gene29840.t1 MTR_2g090235 87.097 62 8 0 12 73 215 276 9.65e-34 124
MS.gene29840.t1 MTR_5g009410 69.231 91 28 0 13 103 115 205 1.01e-28 109
MS.gene29840.t1 MTR_7g092190 56.122 98 39 3 15 111 30 124 1.20e-25 100
MS.gene29840.t1 MTR_7g021010 75.439 57 14 0 15 71 51 107 2.10e-25 97.4
MS.gene29840.t1 MTR_7g021010 75.439 57 14 0 15 71 12 68 5.44e-25 95.1
MS.gene29840.t1 MTR_7g020980 75.439 57 14 0 15 71 51 107 1.07e-24 95.5
MS.gene29840.t1 MTR_1g014780 62.500 64 24 0 9 72 32 95 1.70e-23 94.0
MS.gene29840.t1 MTR_1g014820 33.333 174 89 4 9 178 21 171 1.82e-23 94.7
MS.gene29840.t1 MTR_1g014860 62.500 64 24 0 9 72 16 79 3.08e-23 92.8
MS.gene29840.t1 MTR_3g106290 62.500 64 24 0 8 71 1 64 4.10e-23 92.0
MS.gene29840.t1 MTR_4g008860 62.500 64 24 0 8 71 1 64 5.13e-23 91.7
MS.gene29840.t1 MTR_1g087920 62.162 74 23 1 4 72 61 134 7.76e-23 93.6
MS.gene29840.t1 MTR_2g435590 60.563 71 27 1 2 72 84 153 1.26e-22 92.4
MS.gene29840.t1 MTR_1g014800 61.194 67 25 1 7 72 22 88 2.19e-22 90.9
MS.gene29840.t1 MTR_2g043050 56.000 75 27 1 4 72 2 76 2.65e-22 90.5
MS.gene29840.t1 MTR_3g090760 35.294 204 103 8 6 197 96 282 2.81e-22 92.8
MS.gene29840.t1 MTR_4g086160 66.154 65 18 1 15 75 96 160 3.41e-22 90.5
MS.gene29840.t1 MTR_2g089170 69.492 59 18 0 15 73 65 123 3.71e-22 89.4
MS.gene29840.t1 MTR_5g083340 67.692 65 21 0 15 79 85 149 3.99e-22 93.2
MS.gene29840.t1 MTR_0939s0010 68.333 60 19 0 15 74 65 124 4.31e-22 89.4
MS.gene29840.t1 MTR_2g043030 34.395 157 89 4 12 167 16 159 4.66e-22 89.4
MS.gene29840.t1 MTR_8g092460 64.516 62 22 0 10 71 140 201 4.94e-22 91.7
MS.gene29840.t1 MTR_4g086220 71.930 57 16 0 15 71 96 152 5.11e-22 90.1
MS.gene29840.t1 MTR_4g100380 71.667 60 16 1 13 71 143 202 7.05e-22 90.5
MS.gene29840.t1 MTR_2g103700 49.462 93 46 1 12 103 4 96 7.92e-22 88.2
MS.gene29840.t1 MTR_8g006840 62.319 69 22 2 15 79 125 193 1.65e-21 87.8
MS.gene29840.t1 MTR_3g102100 56.944 72 28 1 2 73 35 103 1.71e-21 87.0
MS.gene29840.t1 MTR_5g009620 68.254 63 20 0 8 70 105 167 2.18e-21 89.7
MS.gene29840.t1 MTR_4g086165 70.175 57 17 0 15 71 82 138 2.20e-21 87.8
MS.gene29840.t1 MTR_4g086190 70.175 57 17 0 15 71 96 152 2.47e-21 88.2
MS.gene29840.t1 MTR_4g088005 60.000 75 26 2 2 72 41 115 2.71e-21 85.1
MS.gene29840.t1 MTR_1g074310 69.492 59 17 1 15 72 21 79 3.76e-21 85.5
MS.gene29840.t1 MTR_4g114570 63.333 60 22 0 12 71 4 63 6.15e-21 86.7
MS.gene29840.t1 MTR_2g078680 67.241 58 19 0 15 72 31 88 8.55e-21 86.3
MS.gene29840.t1 MTR_4g010640 63.333 60 22 0 12 71 4 63 1.12e-20 86.3
MS.gene29840.t1 MTR_8g006815 65.000 60 20 1 15 73 96 155 1.25e-20 85.5
MS.gene29840.t1 MTR_7g081815 67.742 62 19 1 13 73 59 120 1.45e-20 85.5
MS.gene29840.t1 MTR_5g083330 63.077 65 24 0 15 79 35 99 1.97e-20 87.0
MS.gene29840.t1 MTR_8g006825 64.516 62 21 1 13 73 94 155 2.52e-20 85.1
MS.gene29840.t1 MTR_7g081805 67.742 62 19 1 13 73 59 120 2.63e-20 85.1
MS.gene29840.t1 MTR_7g081795 66.154 65 20 2 11 73 55 119 2.92e-20 84.7
MS.gene29840.t1 MTR_1g070070 62.687 67 21 2 15 80 21 84 3.11e-20 83.2
MS.gene29840.t1 MTR_2g015040 65.000 60 20 1 13 71 61 120 3.47e-20 83.6
MS.gene29840.t1 MTR_3g110205 45.361 97 41 2 14 109 42 127 3.64e-20 84.0
MS.gene29840.t1 MTR_5g016750 48.193 83 41 1 2 82 12 94 4.81e-20 83.6
MS.gene29840.t1 MTR_5g012910 60.317 63 25 0 14 76 27 89 5.12e-20 83.6
MS.gene29840.t1 MTR_8g022820 64.912 57 20 0 15 71 123 179 5.44e-20 87.0
MS.gene29840.t1 MTR_8g022820 64.912 57 20 0 15 71 124 180 5.48e-20 87.0
MS.gene29840.t1 MTR_8g022820 64.912 57 20 0 15 71 124 180 5.48e-20 87.0
MS.gene29840.t1 MTR_3g105510 57.576 66 28 0 5 70 27 92 7.38e-20 84.7
MS.gene29840.t1 MTR_7g117690 61.017 59 23 0 14 72 27 85 8.03e-20 82.8
MS.gene29840.t1 MTR_2g105380 64.912 57 20 0 15 71 117 173 8.72e-20 86.3
MS.gene29840.t1 MTR_2g043040 57.377 61 26 0 12 72 16 76 8.73e-20 84.0
MS.gene29840.t1 MTR_6g088405 63.333 60 22 0 14 73 43 102 9.71e-20 83.6
MS.gene29840.t1 MTR_1g074230 68.333 60 16 2 15 72 19 77 9.82e-20 81.6
MS.gene29840.t1 MTR_5g085070 62.295 61 23 0 15 75 51 111 9.88e-20 85.1
MS.gene29840.t1 MTR_1g048610 66.667 60 19 1 13 71 87 146 1.01e-19 84.0
MS.gene29840.t1 MTR_2g014300 61.538 65 25 0 15 79 15 79 1.01e-19 82.4
MS.gene29840.t1 MTR_1g028560 69.643 56 17 0 15 70 115 170 1.09e-19 85.9
MS.gene29840.t1 MTR_4g035430 52.113 71 29 1 6 71 18 88 1.20e-19 83.6
MS.gene29840.t1 MTR_5g082950 71.429 56 16 0 15 70 66 121 1.42e-19 85.1
MS.gene29840.t1 MTR_7g046260 62.712 59 22 0 15 73 61 119 1.98e-19 83.2
MS.gene29840.t1 MTR_1g019110 60.656 61 24 0 13 73 42 102 2.12e-19 82.0
MS.gene29840.t1 MTR_7g028925 59.375 64 23 1 9 72 23 83 2.30e-19 79.3
MS.gene29840.t1 MTR_4g111915 51.807 83 39 1 13 94 51 133 2.31e-19 80.9
MS.gene29840.t1 MTR_4g078710 63.158 57 21 0 15 71 28 84 3.44e-19 82.4
MS.gene29840.t1 MTR_8g006410 54.795 73 31 1 4 76 43 113 3.50e-19 82.0
MS.gene29840.t1 MTR_4g112490 54.430 79 35 1 13 90 51 129 3.59e-19 82.0
MS.gene29840.t1 MTR_8g099215 67.241 58 19 0 13 70 105 162 3.78e-19 84.0
MS.gene29840.t1 MTR_4g054360 62.295 61 22 1 12 71 121 181 4.74e-19 82.8
MS.gene29840.t1 MTR_2g101340 53.968 63 29 0 14 76 40 102 4.75e-19 81.6
MS.gene29840.t1 MTR_2g015050 68.333 60 18 1 13 71 132 191 5.37e-19 82.8
MS.gene29840.t1 MTR_5g085100 62.295 61 23 0 15 75 46 106 6.17e-19 82.8
MS.gene29840.t1 MTR_8g027465 52.239 67 32 0 14 80 38 104 6.53e-19 80.5
MS.gene29840.t1 MTR_4g100420 68.966 58 17 1 15 71 157 214 7.26e-19 82.8
MS.gene29840.t1 MTR_4g054740 61.667 60 22 1 13 71 95 154 7.91e-19 81.6
MS.gene29840.t1 MTR_8g013860 59.322 59 24 0 15 73 47 105 9.11e-19 80.9
MS.gene29840.t1 MTR_3g053690 64.912 57 20 0 15 71 27 83 9.29e-19 81.3
MS.gene29840.t1 MTR_8g102800 60.000 60 24 0 14 73 36 95 1.31e-18 81.3
MS.gene29840.t1 MTR_2g014340 63.158 57 21 0 15 71 19 75 1.49e-18 80.1
MS.gene29840.t1 MTR_2g043020 54.098 61 28 0 12 72 16 76 1.57e-18 80.1
MS.gene29840.t1 MTR_4g100450 67.241 58 18 1 15 71 154 211 2.06e-18 81.6
MS.gene29840.t1 MTR_7g084370 66.071 56 19 0 15 70 42 97 2.67e-18 81.3
MS.gene29840.t1 MTR_4g100650 59.322 59 24 0 15 73 74 132 2.93e-18 80.5
MS.gene29840.t1 MTR_8g069360 62.712 59 22 0 12 70 41 99 4.20e-18 82.0
MS.gene29840.t1 MTR_5g075570 64.912 57 20 0 15 71 124 180 4.64e-18 80.5
MS.gene29840.t1 MTR_7g070220 65.079 63 15 1 15 70 78 140 6.54e-18 81.6
MS.gene29840.t1 MTR_2g438180 67.797 59 18 1 15 72 14 72 7.00e-18 76.6
MS.gene29840.t1 MTR_5g032820 66.071 56 19 0 15 70 46 101 8.75e-18 80.5
MS.gene29840.t1 MTR_4g119270 60.714 56 22 0 15 70 53 108 1.10e-17 80.1
MS.gene29840.t1 MTR_3g105480 62.963 54 20 0 17 70 33 86 1.83e-17 77.8
MS.gene29840.t1 MTR_7g096700 60.938 64 23 2 11 72 15 78 2.08e-17 75.9
MS.gene29840.t1 MTR_1g070035 61.017 59 22 1 13 70 75 133 2.52e-17 77.4
MS.gene29840.t1 MTR_1g097190 53.521 71 30 2 8 75 16 86 3.07e-17 75.1
MS.gene29840.t1 MTR_6g465460 54.930 71 30 1 2 70 39 109 3.24e-17 77.8
MS.gene29840.t1 MTR_6g465450 53.521 71 31 1 2 70 39 109 3.36e-17 77.4
MS.gene29840.t1 MTR_7g096750 63.793 58 20 1 15 71 20 77 4.61e-17 74.7
MS.gene29840.t1 MTR_1g074250 60.000 60 22 1 15 72 19 78 4.91e-17 74.3
MS.gene29840.t1 MTR_1g090290 59.016 61 24 1 12 71 110 170 6.42e-17 75.9
MS.gene29840.t1 MTR_2g019750 58.929 56 23 0 15 70 50 105 7.99e-17 77.4
MS.gene29840.t1 MTR_1g069985 61.017 59 22 1 13 70 73 131 9.48e-17 75.9
MS.gene29840.t1 MTR_6g465430 53.521 71 31 1 2 70 39 109 9.58e-17 76.3
MS.gene29840.t1 MTR_6g465530 47.619 84 33 1 14 97 32 104 1.29e-16 75.1
MS.gene29840.t1 MTR_1g070020 57.143 63 26 1 9 70 64 126 1.65e-16 75.1
MS.gene29840.t1 MTR_4g054860 58.333 60 24 1 13 71 129 188 1.72e-16 76.3
MS.gene29840.t1 MTR_6g465510 61.404 57 22 0 14 70 32 88 1.86e-16 74.7
MS.gene29840.t1 MTR_1g070000 61.818 55 20 1 17 70 86 140 2.29e-16 74.7
MS.gene29840.t1 MTR_6g465690 59.649 57 23 0 14 70 62 118 2.95e-16 75.1
MS.gene29840.t1 MTR_7g085810 58.065 62 26 0 9 70 24 85 3.36e-16 75.1
MS.gene29840.t1 MTR_6g465420 52.113 71 32 1 2 70 39 109 3.61e-16 75.1
MS.gene29840.t1 MTR_1g070015 61.404 57 21 1 15 70 84 140 3.86e-16 74.3
MS.gene29840.t1 MTR_6g466000 59.649 57 23 0 14 70 56 112 4.03e-16 74.3
MS.gene29840.t1 MTR_1g101600 61.404 57 22 0 14 70 40 96 4.51e-16 73.6
MS.gene29840.t1 MTR_8g032610 60.345 58 23 0 13 70 25 82 4.76e-16 75.1
MS.gene29840.t1 MTR_6g012970 56.923 65 28 0 6 70 29 93 4.95e-16 75.9
MS.gene29840.t1 MTR_7g011630 54.286 70 32 0 1 70 28 97 6.66e-16 75.5
MS.gene29840.t1 MTR_5g008790 51.562 64 29 1 12 73 15 78 6.93e-16 72.4
MS.gene29840.t1 MTR_2g016730 64.286 56 20 0 15 70 23 78 8.32e-16 74.7
MS.gene29840.t1 MTR_1g070045 54.412 68 30 1 4 70 55 122 1.01e-15 72.0
MS.gene29840.t1 MTR_3g107380 46.602 103 44 2 12 103 5 107 1.22e-15 72.4
MS.gene29840.t1 MTR_5g008470 39.535 86 39 1 17 102 77 149 1.41e-15 72.0
MS.gene29840.t1 MTR_1g006660 60.656 61 24 0 14 74 46 106 2.93e-15 72.4
MS.gene29840.t1 MTR_4g082345 58.730 63 26 0 8 70 41 103 3.06e-15 73.2
MS.gene29840.t1 MTR_5g008590 66.102 59 20 0 15 73 11 69 3.08e-15 71.2
MS.gene29840.t1 MTR_6g466130 59.649 57 23 0 14 70 65 121 3.31e-15 72.0
MS.gene29840.t1 MTR_6g466020 56.140 57 25 0 14 70 42 98 4.87e-15 70.5
MS.gene29840.t1 MTR_1g023170 69.492 59 18 0 15 73 40 98 5.01e-15 72.0
MS.gene29840.t1 MTR_6g465850 59.649 57 23 0 14 70 62 118 5.86e-15 72.0
MS.gene29840.t1 MTR_6g088425 61.667 60 23 0 14 73 48 107 8.37e-15 70.9
MS.gene29840.t1 MTR_8g085960 58.929 56 23 0 15 70 25 80 9.00e-15 70.9
MS.gene29840.t1 MTR_4g102670 58.621 58 23 1 15 72 15 71 2.11e-14 68.6
MS.gene29840.t1 MTR_1g069960 66.102 59 19 1 15 72 27 85 3.01e-14 67.4
MS.gene29840.t1 MTR_6g029180 58.929 56 23 0 15 70 33 88 5.48e-14 69.7
MS.gene29840.t1 MTR_5g008540 43.750 80 43 1 2 79 11 90 8.13e-14 65.1
MS.gene29840.t1 MTR_3g098580 49.474 95 45 2 6 100 69 160 8.27e-14 68.6
MS.gene29840.t1 MTR_5g010930 48.052 77 32 2 2 70 34 110 1.04e-13 67.8
MS.gene29840.t1 MTR_3g112440 61.644 73 27 1 1 73 26 97 1.24e-13 67.4
MS.gene29840.t1 MTR_7g096810 59.091 66 26 1 15 79 13 78 1.57e-13 65.1
MS.gene29840.t1 MTR_5g010940 48.052 77 32 2 2 70 39 115 1.81e-13 67.0
MS.gene29840.t1 MTR_3g095190 68.421 57 18 0 15 71 170 226 2.13e-13 68.2
MS.gene29840.t1 MTR_1g012470 61.404 57 22 0 15 71 7 63 2.40e-13 66.2
MS.gene29840.t1 MTR_5g010910 48.052 77 32 2 2 70 34 110 3.05e-13 66.2
MS.gene29840.t1 MTR_7g096780 41.045 134 64 3 2 130 68 191 4.70e-13 65.9
MS.gene29840.t1 MTR_1g069945 62.500 64 23 1 9 71 95 158 7.55e-13 65.5
MS.gene29840.t1 MTR_2g085015 53.333 60 26 2 14 71 46 105 8.63e-13 65.1
MS.gene29840.t1 MTR_1g105400 50.909 55 27 0 10 64 110 164 1.06e-12 66.2
MS.gene29840.t1 MTR_1g040430 58.000 50 20 1 23 71 119 168 4.29e-12 62.8
MS.gene29840.t1 MTR_5g008550 50.000 68 33 1 6 73 13 79 4.57e-12 62.8
MS.gene29840.t1 MTR_1g110970 51.667 60 25 2 15 70 97 156 4.67e-12 64.3
MS.gene29840.t1 MTR_1g074370 65.000 60 20 1 13 71 71 130 4.69e-12 62.8
MS.gene29840.t1 MTR_3g017420 53.061 49 23 0 23 71 3 51 4.96e-12 59.7
MS.gene29840.t1 MTR_1g069940 60.938 64 24 1 9 71 89 152 5.43e-12 63.2
MS.gene29840.t1 MTR_5g057810 45.122 82 37 1 8 81 81 162 6.02e-12 63.5
MS.gene29840.t1 MTR_5g057647 45.122 82 37 1 8 81 81 162 6.02e-12 63.5
MS.gene29840.t1 MTR_8g023680 63.415 41 15 0 15 55 116 156 7.89e-12 63.5
MS.gene29840.t1 MTR_8g023700 61.905 42 16 0 14 55 116 157 1.30e-11 63.2
MS.gene29840.t1 MTR_5g085125 52.632 57 27 0 15 71 16 72 1.47e-11 60.8
MS.gene29840.t1 MTR_3g062440 52.778 72 31 2 2 72 104 173 1.52e-11 62.0
MS.gene29840.t1 MTR_6g033255 67.213 61 20 0 13 73 18 78 1.81e-11 61.2
MS.gene29840.t1 MTR_1g043350 61.290 62 23 1 10 70 77 138 2.38e-11 61.2
MS.gene29840.t1 MTR_7g096830 60.000 60 23 1 13 71 96 155 7.40e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene29840.t1 AT1G78080 65.842 202 55 5 6 205 143 332 4.33e-83 250
MS.gene29840.t1 AT1G22190 56.872 211 59 7 1 205 69 253 1.10e-65 203
MS.gene29840.t1 AT2G22200 47.442 215 87 6 1 205 57 255 6.09e-54 173
MS.gene29840.t1 AT1G36060 51.244 201 75 6 6 205 134 312 6.30e-52 169
MS.gene29840.t1 AT4G39780 46.667 195 83 4 13 205 91 266 1.53e-50 165
MS.gene29840.t1 AT5G65130 46.860 207 62 8 9 205 107 275 1.15e-45 152
MS.gene29840.t1 AT5G65130 46.860 207 62 8 9 205 105 273 1.61e-45 152
MS.gene29840.t1 AT4G13620 81.159 69 13 0 8 76 225 293 4.69e-37 133
MS.gene29840.t1 AT2G20880 85.484 62 9 0 12 73 184 245 1.21e-32 120
MS.gene29840.t1 AT1G64380 56.452 124 52 2 6 128 127 249 1.22e-30 115
MS.gene29840.t1 AT4G28140 80.000 60 12 0 12 71 140 199 1.15e-28 108
MS.gene29840.t1 AT3G16770 61.429 70 27 0 6 75 70 139 1.07e-24 97.4
MS.gene29840.t1 AT2G33710 75.439 57 14 0 15 71 70 126 1.71e-24 96.3
MS.gene29840.t1 AT2G33710 75.439 57 14 0 15 71 70 126 1.81e-24 96.7
MS.gene29840.t1 AT3G57600 61.538 78 30 0 15 92 28 105 1.57e-23 95.1
MS.gene29840.t1 AT5G13330 71.186 59 17 0 13 71 37 95 3.94e-23 92.4
MS.gene29840.t1 AT5G25390 49.474 95 45 1 12 103 4 98 5.84e-23 91.7
MS.gene29840.t1 AT4G11140 71.930 57 16 0 15 71 87 143 7.75e-23 93.6
MS.gene29840.t1 AT2G47520 67.213 61 20 0 14 74 49 109 9.81e-23 90.5
MS.gene29840.t1 AT5G25190 60.938 64 25 0 8 71 1 64 2.51e-22 89.7
MS.gene29840.t1 AT5G61890 65.152 66 23 0 13 78 88 153 4.26e-22 90.5
MS.gene29840.t1 AT1G15360 66.667 60 20 0 12 71 4 63 4.38e-22 89.4
MS.gene29840.t1 AT1G15360 66.667 60 20 0 12 71 4 63 4.38e-22 89.4
MS.gene29840.t1 AT4G27950 60.811 74 23 1 3 70 100 173 4.59e-22 92.0
MS.gene29840.t1 AT1G19210 58.209 67 28 0 6 72 3 69 6.57e-22 88.6
MS.gene29840.t1 AT5G21960 67.241 58 19 0 15 72 7 64 2.11e-21 88.2
MS.gene29840.t1 AT1G46768 62.500 64 24 0 13 76 29 92 2.34e-21 86.3
MS.gene29840.t1 AT1G46768 62.500 64 24 0 13 76 29 92 2.34e-21 86.3
MS.gene29840.t1 AT4G17500 65.152 66 22 1 13 77 146 211 2.36e-21 89.0
MS.gene29840.t1 AT1G71450 64.407 59 21 0 15 73 24 82 2.43e-21 87.0
MS.gene29840.t1 AT3G11020 64.286 70 19 1 15 84 78 141 2.45e-21 90.1
MS.gene29840.t1 AT1G46768 62.500 64 24 0 13 76 29 92 2.83e-21 85.9
MS.gene29840.t1 AT2G46310 62.121 66 25 0 5 70 89 154 2.83e-21 89.4
MS.gene29840.t1 AT1G75490 71.930 57 16 0 15 71 42 98 3.03e-21 87.4
MS.gene29840.t1 AT4G36900 58.209 67 28 0 7 73 22 88 6.19e-21 86.3
MS.gene29840.t1 AT5G53290 65.625 64 22 0 7 70 117 180 6.63e-21 89.4
MS.gene29840.t1 AT2G23340 57.353 68 29 0 6 73 19 86 7.07e-21 85.9
MS.gene29840.t1 AT5G47220 70.000 60 17 1 13 71 115 174 9.29e-21 87.0
MS.gene29840.t1 AT4G06746 59.375 64 26 0 8 71 29 92 1.01e-20 84.7
MS.gene29840.t1 AT2G40340 62.500 64 24 0 15 78 14 77 1.03e-20 87.8
MS.gene29840.t1 AT2G40340 62.500 64 24 0 15 78 14 77 1.03e-20 87.8
MS.gene29840.t1 AT2G40340 62.500 64 24 0 15 78 14 77 1.03e-20 87.8
MS.gene29840.t1 AT3G23230 69.492 59 17 1 15 72 20 78 1.18e-20 84.3
MS.gene29840.t1 AT5G67190 60.938 64 25 0 10 73 16 79 1.21e-20 85.5
MS.gene29840.t1 AT1G74930 62.069 58 22 0 15 72 21 78 1.32e-20 85.5
MS.gene29840.t1 AT5G25390 48.421 95 43 2 12 103 4 95 1.49e-20 85.1
MS.gene29840.t1 AT5G05410 70.175 57 17 0 15 71 79 135 1.77e-20 87.4
MS.gene29840.t1 AT2G40340 62.500 64 24 0 15 78 72 135 1.80e-20 87.4
MS.gene29840.t1 AT2G44840 65.000 60 20 1 15 73 92 151 1.85e-20 85.9
MS.gene29840.t1 AT5G43410 55.556 81 35 1 1 80 1 81 1.96e-20 83.2
MS.gene29840.t1 AT2G40340 62.500 64 24 0 15 78 72 135 2.39e-20 87.4
MS.gene29840.t1 AT2G40340 62.500 64 24 0 15 78 79 142 2.56e-20 87.4
MS.gene29840.t1 AT5G05410 70.175 57 17 0 15 71 79 135 3.11e-20 87.0
MS.gene29840.t1 AT2G35700 37.879 132 65 2 15 140 45 165 3.20e-20 84.3
MS.gene29840.t1 AT3G15210 64.407 59 21 0 15 73 25 83 4.57e-20 84.7
MS.gene29840.t1 AT3G50260 40.952 105 62 0 15 119 21 125 4.74e-20 82.8
MS.gene29840.t1 AT3G61630 65.625 64 22 0 7 70 97 160 5.38e-20 86.3
MS.gene29840.t1 AT3G16280 34.783 184 90 4 14 196 60 214 5.40e-20 84.7
MS.gene29840.t1 AT1G72360 55.405 74 29 1 3 72 60 133 5.82e-20 85.1
MS.gene29840.t1 AT3G16280 35.758 165 87 3 14 177 78 224 6.84e-20 85.1
MS.gene29840.t1 AT5G47230 64.286 70 19 2 8 71 144 213 7.08e-20 85.5
MS.gene29840.t1 AT5G18450 62.857 70 25 1 1 70 21 89 8.91e-20 85.5
MS.gene29840.t1 AT4G23750 67.241 58 19 0 13 70 120 177 1.11e-19 85.9
MS.gene29840.t1 AT4G23750 67.241 58 19 0 13 70 120 177 1.11e-19 85.9
MS.gene29840.t1 AT1G71130 63.235 68 20 1 8 70 72 139 1.27e-19 82.0
MS.gene29840.t1 AT5G51190 68.966 58 17 1 15 71 72 129 2.04e-19 83.2
MS.gene29840.t1 AT5G44210 64.912 57 20 0 15 71 33 89 2.48e-19 82.4
MS.gene29840.t1 AT4G32800 60.000 60 24 0 14 73 18 77 2.97e-19 82.4
MS.gene29840.t1 AT1G72360 58.730 63 26 0 10 72 20 82 3.50e-19 82.0
MS.gene29840.t1 AT1G28360 67.241 58 19 0 15 72 12 69 4.03e-19 81.6
MS.gene29840.t1 AT4G31060 36.842 152 77 6 13 153 25 168 4.66e-19 81.3
MS.gene29840.t1 AT1G72360 58.730 63 26 0 10 72 69 131 4.78e-19 82.8
MS.gene29840.t1 AT5G11590 60.000 60 24 0 14 73 50 109 4.84e-19 82.4
MS.gene29840.t1 AT4G16750 48.193 83 32 1 15 97 40 111 5.61e-19 80.9
MS.gene29840.t1 AT2G44940 54.167 72 31 1 2 73 89 158 6.20e-19 83.2
MS.gene29840.t1 AT5G25810 48.810 84 32 2 14 97 35 107 6.60e-19 81.6
MS.gene29840.t1 AT1G03800 53.425 73 33 1 5 77 44 115 6.72e-19 82.0
MS.gene29840.t1 AT2G25820 49.383 81 30 1 14 94 25 94 7.05e-19 81.6
MS.gene29840.t1 AT3G23240 56.757 74 31 1 7 79 74 147 7.25e-19 81.6
MS.gene29840.t1 AT3G20310 59.701 67 25 1 5 71 19 83 8.83e-19 81.6
MS.gene29840.t1 AT5G18560 39.716 141 62 6 15 138 55 189 1.05e-18 83.2
MS.gene29840.t1 AT5G13910 64.286 56 20 0 15 70 20 75 1.48e-18 80.5
MS.gene29840.t1 AT2G31230 65.517 58 19 1 15 71 86 143 1.70e-18 80.9
MS.gene29840.t1 AT1G28160 66.071 56 19 0 15 70 39 94 1.77e-18 80.9
MS.gene29840.t1 AT1G28370 63.158 57 21 0 15 71 20 76 2.46e-18 79.0
MS.gene29840.t1 AT4G17490 68.966 58 17 1 15 71 137 194 2.91e-18 80.9
MS.gene29840.t1 AT1G01250 58.621 58 24 0 14 71 44 101 4.08e-18 79.0
MS.gene29840.t1 AT3G60490 59.322 59 24 0 15 73 71 129 4.70e-18 80.1
MS.gene29840.t1 AT2G36450 63.333 60 21 1 14 72 14 73 5.10e-18 78.6
MS.gene29840.t1 AT2G40350 62.712 59 22 0 15 73 74 132 5.89e-18 77.8
MS.gene29840.t1 AT1G28370 63.158 57 21 0 15 71 58 114 5.93e-18 78.6
MS.gene29840.t1 AT1G12980 58.209 67 27 1 4 70 47 112 6.47e-18 80.5
MS.gene29840.t1 AT2G40350 62.712 59 22 0 15 73 67 125 7.04e-18 77.4
MS.gene29840.t1 AT4G25490 64.912 57 20 0 14 70 47 103 7.40e-18 78.6
MS.gene29840.t1 AT4G25470 62.712 59 22 0 14 72 50 108 8.67e-18 78.6
MS.gene29840.t1 AT1G21910 59.649 57 23 0 15 71 50 106 1.20e-17 78.6
MS.gene29840.t1 AT5G61600 63.793 58 20 1 15 71 88 145 1.41e-17 78.6
MS.gene29840.t1 AT1G24590 64.407 59 21 0 12 70 55 113 1.78e-17 79.3
MS.gene29840.t1 AT1G71520 55.556 63 24 1 15 73 14 76 2.29e-17 75.9
MS.gene29840.t1 AT1G50640 57.353 68 27 1 4 71 19 84 3.17e-17 77.4
MS.gene29840.t1 AT1G22810 55.738 61 25 1 15 73 14 74 3.22e-17 75.5
MS.gene29840.t1 AT4G25480 61.017 59 23 0 14 72 50 108 3.66e-17 77.0
MS.gene29840.t1 AT5G51990 61.404 57 22 0 14 70 53 109 1.78e-16 75.1
MS.gene29840.t1 AT1G22985 62.295 61 20 1 13 70 73 133 1.84e-16 73.6
MS.gene29840.t1 AT4G18450 60.656 61 23 1 4 63 99 159 1.85e-16 76.3
MS.gene29840.t1 AT1G12890 60.714 56 22 0 15 70 21 76 3.45e-16 74.3
MS.gene29840.t1 AT5G07580 60.656 61 23 1 12 71 107 167 4.71e-16 73.6
MS.gene29840.t1 AT5G19790 62.069 58 22 0 15 72 22 79 5.63e-16 74.3
MS.gene29840.t1 AT4G34410 63.077 65 24 0 15 79 136 200 1.14e-15 73.6
MS.gene29840.t1 AT1G43160 66.154 65 21 1 7 71 54 117 2.29e-15 71.6
MS.gene29840.t1 AT5G07310 67.797 59 19 0 13 71 90 148 4.61e-15 72.0
MS.gene29840.t1 AT5G50080 67.797 59 19 0 13 71 84 142 5.63e-15 71.2
MS.gene29840.t1 AT5G50080 67.797 59 19 0 13 71 75 133 7.18e-15 70.9
MS.gene29840.t1 AT5G64750 62.963 54 19 1 22 74 192 245 9.13e-15 72.4
MS.gene29840.t1 AT1G68550 62.295 61 21 1 4 64 102 160 1.01e-14 71.6
MS.gene29840.t1 AT1G68550 62.295 61 21 1 4 64 102 160 1.01e-14 71.6
MS.gene29840.t1 AT1G77200 61.017 59 23 0 15 73 43 101 1.04e-14 70.9
MS.gene29840.t1 AT5G11190 46.392 97 47 2 15 106 7 103 1.48e-14 69.3
MS.gene29840.t1 AT2G38340 58.108 74 23 1 6 71 61 134 1.60e-14 70.1
MS.gene29840.t1 AT1G33760 45.631 103 46 1 15 117 20 112 4.01e-14 68.2
MS.gene29840.t1 AT1G12610 49.296 71 34 1 2 70 15 85 5.24e-14 68.2
MS.gene29840.t1 AT1G63030 49.296 71 34 1 2 70 15 85 8.22e-14 67.0
MS.gene29840.t1 AT1G63030 49.296 71 34 1 2 70 15 85 8.22e-14 67.0
MS.gene29840.t1 AT2G40220 71.429 56 16 0 15 70 55 110 1.12e-13 68.9
MS.gene29840.t1 AT1G77640 59.016 61 25 0 13 73 41 101 8.54e-13 65.5
MS.gene29840.t1 AT3G14230 65.574 61 21 0 15 75 123 183 4.58e-12 64.3
MS.gene29840.t1 AT3G14230 65.574 61 21 0 15 75 124 184 4.59e-12 64.3
MS.gene29840.t1 AT3G14230 65.574 61 21 0 15 75 128 188 5.00e-12 64.3
MS.gene29840.t1 AT1G06160 65.000 60 20 1 13 71 80 139 9.19e-12 62.8
MS.gene29840.t1 AT1G53170 56.716 67 23 1 15 81 31 91 1.19e-11 61.2
MS.gene29840.t1 AT3G25890 56.897 58 19 2 7 64 127 178 1.38e-11 62.8
MS.gene29840.t1 AT3G25890 56.897 58 19 2 7 64 127 178 1.38e-11 62.8
MS.gene29840.t1 AT1G04370 61.538 65 24 1 15 78 20 84 1.69e-11 59.7
MS.gene29840.t1 AT1G53910 66.667 57 19 0 15 71 125 181 2.21e-11 62.4
MS.gene29840.t1 AT1G53910 66.667 57 19 0 15 71 125 181 2.21e-11 62.4
MS.gene29840.t1 AT1G53910 66.667 57 19 0 15 71 123 179 2.29e-11 62.4
MS.gene29840.t1 AT5G61590 62.295 61 22 1 12 71 104 164 2.98e-11 60.5
MS.gene29840.t1 AT3G23220 61.017 59 22 1 15 72 14 72 4.22e-11 58.9

Find 61 sgRNAs with CRISPR-Local

Find 58 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAACCTTGGTGTTTCAAATT+TGG 0.125662 3.4:-72734087 None:intergenic
AAACACCAAGGTTCAATTAT+TGG 0.192299 3.4:+72734096 MS.gene29840:CDS
CCACTTTCTGATCTTACTTT+TGG 0.243386 3.4:+72734381 MS.gene29840:CDS
CGCTTCTAAGGTGGTTTCTA+AGG 0.249824 3.4:+72734257 MS.gene29840:CDS
CATAACCTCGTACGGTTCTT+AGG 0.263220 3.4:-72733973 None:intergenic
TCAATTATTGGTGGTGAATT+TGG 0.266271 3.4:+72734108 MS.gene29840:CDS
GACAAAGGCACTGGGGAAAA+TGG 0.284535 3.4:+72733932 MS.gene29840:CDS
CACAGCTGAAGAAGCTGCTT+TGG 0.295262 3.4:+72734011 MS.gene29840:CDS
ACCCTTCTTATGAGATTGAT+TGG 0.323485 3.4:+72734460 MS.gene29840:CDS
CTACCACCCACATGCTTCAT+AGG 0.359167 3.4:-72733874 None:intergenic
CTAAGAACCGTACGAGGTTA+TGG 0.364074 3.4:+72733974 MS.gene29840:CDS
GAAGGCGAAAGCCGCTTCTA+AGG 0.378186 3.4:+72734245 MS.gene29840:CDS
TTTAGCTGAGATGCAGAAAC+AGG 0.382190 3.4:+72734188 MS.gene29840:CDS
TTCGCTGCCGGCGTCTTCTT+AGG 0.384904 3.4:-72734225 None:intergenic
TTGTAAGGTTGAAGCAGTTT+CGG 0.399604 3.4:+72734323 MS.gene29840:CDS
GCGGCTTTCGCCTTCGCTGC+CGG 0.406631 3.4:-72734237 None:intergenic
CACTCCTCTGTATAGCTTCG+TGG 0.429543 3.4:-72733908 None:intergenic
CCCTTCTTATGAGATTGATT+GGG 0.440117 3.4:+72734461 MS.gene29840:CDS
GTCTGTTGATGATTTGAAGA+AGG 0.443769 3.4:+72734281 MS.gene29840:CDS
AGAGCCAGAGGAGTGTTGTA+AGG 0.456283 3.4:+72734308 MS.gene29840:CDS
ACAAAGGCACTGGGGAAAAT+GGG 0.471083 3.4:+72733933 MS.gene29840:CDS
TCCCAATCAATCTCATAAGA+AGG 0.478799 3.4:-72734462 None:intergenic
TAAGAAGACGCCGGCAGCGA+AGG 0.489385 3.4:+72734227 MS.gene29840:CDS
AGCTACGTGGTGACTTTGCT+AGG 0.502439 3.4:+72734055 MS.gene29840:CDS
ACTCCTCTGTATAGCTTCGT+GGG 0.515818 3.4:-72733907 None:intergenic
CACCACCAATAATTGAACCT+TGG 0.527953 3.4:-72734101 None:intergenic
GAGGAGTGAGACAAAGGCAC+TGG 0.531370 3.4:+72733923 MS.gene29840:CDS
AGCTTCTTCAGCTGTGTCAA+AGG 0.541181 3.4:-72734004 None:intergenic
AGCTTAGCATCAACAGAAGA+AGG 0.541694 3.4:-72734147 None:intergenic
AAGCTTCAAGCTATTTGTGA+AGG 0.548878 3.4:+72734165 MS.gene29840:CDS
TCAACCTTACAACACTCCTC+TGG 0.550117 3.4:-72734312 None:intergenic
AGGAGTGAGACAAAGGCACT+GGG 0.557612 3.4:+72733924 MS.gene29840:CDS
CCCAATCAATCTCATAAGAA+GGG 0.561445 3.4:-72734461 None:intergenic
GCATCAACAGAAGAAGGAAG+AGG 0.563829 3.4:-72734141 None:intergenic
GAAGAAGGATTCAGAGCCAG+AGG 0.565926 3.4:+72734296 MS.gene29840:CDS
ACTGAGAGTGAAGGTTCTGA+AGG 0.574770 3.4:+72734351 MS.gene29840:CDS
CACCAAGGTTCAATTATTGG+TGG 0.582649 3.4:+72734099 MS.gene29840:CDS
TACCAAGCCATAACCTCGTA+CGG 0.584590 3.4:-72733981 None:intergenic
TATACAGAGGAGTGAGACAA+AGG 0.585168 3.4:+72733917 MS.gene29840:CDS
CTTAGAAACCACCTTAGAAG+CGG 0.586662 3.4:-72734256 None:intergenic
TGTTGGTGAGCCACAGTGGG+AGG 0.587402 3.4:+72734407 MS.gene29840:CDS
GTCAATTCCTATGAAGCATG+TGG 0.591838 3.4:+72733867 None:intergenic
CCAAAAGTAAGATCAGAAAG+TGG 0.594128 3.4:-72734381 None:intergenic
TTTCCAAATTTGAAACACCA+AGG 0.597546 3.4:+72734084 MS.gene29840:CDS
TCGGTGATTACTGAGAGTGA+AGG 0.602246 3.4:+72734342 MS.gene29840:CDS
GGCGAAAGCCGCTTCTAAGG+TGG 0.602887 3.4:+72734248 MS.gene29840:CDS
AACCGTACGAGGTTATGGCT+TGG 0.617995 3.4:+72733979 MS.gene29840:CDS
TTAGCTGAGATGCAGAAACA+GGG 0.637834 3.4:+72734189 MS.gene29840:CDS
TGATGTTGGTGAGCCACAGT+GGG 0.640457 3.4:+72734404 MS.gene29840:CDS
TGAGATGCAGAAACAGGGGA+AGG 0.651874 3.4:+72734194 MS.gene29840:CDS
GTTGGTGAGCCACAGTGGGA+GGG 0.654158 3.4:+72734408 MS.gene29840:CDS
TCTGAATCACCCTCCCACTG+TGG 0.654829 3.4:-72734417 None:intergenic
TGAGAAGCCTAAGAAGACGC+CGG 0.658233 3.4:+72734218 MS.gene29840:CDS
TCAATTCCTATGAAGCATGT+GGG 0.662329 3.4:+72733868 None:intergenic
GTGATGTTGGTGAGCCACAG+TGG 0.665421 3.4:+72734403 MS.gene29840:CDS
ATTCCTATGAAGCATGTGGG+TGG 0.671043 3.4:+72733871 None:intergenic
GACTACCTAAGAACCGTACG+AGG 0.695356 3.4:+72733968 MS.gene29840:CDS
TAGCTGAGATGCAGAAACAG+GGG 0.700327 3.4:+72734190 MS.gene29840:CDS
AAACCCACGAAGCTATACAG+AGG 0.751413 3.4:+72733904 MS.gene29840:CDS
GGAGTGAGACAAAGGCACTG+GGG 0.768565 3.4:+72733925 MS.gene29840:CDS
AAAGCTGCTTATAAGCTACG+TGG 0.774181 3.4:+72734042 MS.gene29840:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
AAACACCAAGGTTCAATTAT+TGG + chr3.4:72734096-72734115 MS.gene29840:CDS 30.0%
! TTTCCAAATTTGAAACACCA+AGG + chr3.4:72734084-72734103 MS.gene29840:CDS 30.0%
!! TCAATTATTGGTGGTGAATT+TGG + chr3.4:72734108-72734127 MS.gene29840:CDS 30.0%
AAGCTTCAAGCTATTTGTGA+AGG + chr3.4:72734165-72734184 MS.gene29840:CDS 35.0%
ACCCTTCTTATGAGATTGAT+TGG + chr3.4:72734460-72734479 MS.gene29840:CDS 35.0%
CCAAAAGTAAGATCAGAAAG+TGG - chr3.4:72734384-72734403 None:intergenic 35.0%
CCCAATCAATCTCATAAGAA+GGG - chr3.4:72734464-72734483 None:intergenic 35.0%
CCCTTCTTATGAGATTGATT+GGG + chr3.4:72734461-72734480 MS.gene29840:CDS 35.0%
TCCCAATCAATCTCATAAGA+AGG - chr3.4:72734465-72734484 None:intergenic 35.0%
TTGTAAGGTTGAAGCAGTTT+CGG + chr3.4:72734323-72734342 MS.gene29840:CDS 35.0%
! CCACTTTCTGATCTTACTTT+TGG + chr3.4:72734381-72734400 MS.gene29840:CDS 35.0%
!! GAACCTTGGTGTTTCAAATT+TGG - chr3.4:72734090-72734109 None:intergenic 35.0%
!! GTCTGTTGATGATTTGAAGA+AGG + chr3.4:72734281-72734300 MS.gene29840:CDS 35.0%
!!! GATCTTACTTTTGGTGATGT+TGG + chr3.4:72734390-72734409 MS.gene29840:CDS 35.0%
AAAGCTGCTTATAAGCTACG+TGG + chr3.4:72734042-72734061 MS.gene29840:CDS 40.0%
AGCTTAGCATCAACAGAAGA+AGG - chr3.4:72734150-72734169 None:intergenic 40.0%
CACCAAGGTTCAATTATTGG+TGG + chr3.4:72734099-72734118 MS.gene29840:CDS 40.0%
CACCACCAATAATTGAACCT+TGG - chr3.4:72734104-72734123 None:intergenic 40.0%
CTTAGAAACCACCTTAGAAG+CGG - chr3.4:72734259-72734278 None:intergenic 40.0%
TATACAGAGGAGTGAGACAA+AGG + chr3.4:72733917-72733936 MS.gene29840:CDS 40.0%
TTAGCTGAGATGCAGAAACA+GGG + chr3.4:72734189-72734208 MS.gene29840:CDS 40.0%
TTTAGCTGAGATGCAGAAAC+AGG + chr3.4:72734188-72734207 MS.gene29840:CDS 40.0%
AAACCCACGAAGCTATACAG+AGG + chr3.4:72733904-72733923 MS.gene29840:CDS 45.0%
ACTCCTCTGTATAGCTTCGT+GGG - chr3.4:72733910-72733929 None:intergenic 45.0%
AGCTTCTTCAGCTGTGTCAA+AGG - chr3.4:72734007-72734026 None:intergenic 45.0%
CATAACCTCGTACGGTTCTT+AGG - chr3.4:72733976-72733995 None:intergenic 45.0%
CTAAGAACCGTACGAGGTTA+TGG + chr3.4:72733974-72733993 MS.gene29840:CDS 45.0%
GCATCAACAGAAGAAGGAAG+AGG - chr3.4:72734144-72734163 None:intergenic 45.0%
TACCAAGCCATAACCTCGTA+CGG - chr3.4:72733984-72734003 None:intergenic 45.0%
TAGCTGAGATGCAGAAACAG+GGG + chr3.4:72734190-72734209 MS.gene29840:CDS 45.0%
TCAACCTTACAACACTCCTC+TGG - chr3.4:72734315-72734334 None:intergenic 45.0%
TCGGTGATTACTGAGAGTGA+AGG + chr3.4:72734342-72734361 MS.gene29840:CDS 45.0%
! ACTGAGAGTGAAGGTTCTGA+AGG + chr3.4:72734351-72734370 MS.gene29840:CDS 45.0%
!! ACAAAGGCACTGGGGAAAAT+GGG + chr3.4:72733933-72733952 MS.gene29840:CDS 45.0%
!! CGCTTCTAAGGTGGTTTCTA+AGG + chr3.4:72734257-72734276 MS.gene29840:CDS 45.0%
AACCGTACGAGGTTATGGCT+TGG + chr3.4:72733979-72733998 MS.gene29840:CDS 50.0%
AGCTACGTGGTGACTTTGCT+AGG + chr3.4:72734055-72734074 MS.gene29840:CDS 50.0%
CACAGCTGAAGAAGCTGCTT+TGG + chr3.4:72734011-72734030 MS.gene29840:CDS 50.0%
CACTCCTCTGTATAGCTTCG+TGG - chr3.4:72733911-72733930 None:intergenic 50.0%
GAAGAAGGATTCAGAGCCAG+AGG + chr3.4:72734296-72734315 MS.gene29840:CDS 50.0%
GACTACCTAAGAACCGTACG+AGG + chr3.4:72733968-72733987 MS.gene29840:CDS 50.0%
TGAGAAGCCTAAGAAGACGC+CGG + chr3.4:72734218-72734237 MS.gene29840:CDS 50.0%
TGAGATGCAGAAACAGGGGA+AGG + chr3.4:72734194-72734213 MS.gene29840:CDS 50.0%
! TGATGTTGGTGAGCCACAGT+GGG + chr3.4:72734404-72734423 MS.gene29840:CDS 50.0%
!! AGAGCCAGAGGAGTGTTGTA+AGG + chr3.4:72734308-72734327 MS.gene29840:CDS 50.0%
!! AGGAGTGAGACAAAGGCACT+GGG + chr3.4:72733924-72733943 MS.gene29840:CDS 50.0%
!! GACAAAGGCACTGGGGAAAA+TGG + chr3.4:72733932-72733951 MS.gene29840:CDS 50.0%
GAAGGCGAAAGCCGCTTCTA+AGG + chr3.4:72734245-72734264 MS.gene29840:CDS 55.0%
TCTGAATCACCCTCCCACTG+TGG - chr3.4:72734420-72734439 None:intergenic 55.0%
! GAGGAGTGAGACAAAGGCAC+TGG + chr3.4:72733923-72733942 MS.gene29840:CDS 55.0%
! GTGATGTTGGTGAGCCACAG+TGG + chr3.4:72734403-72734422 MS.gene29840:CDS 55.0%
!! GGAGTGAGACAAAGGCACTG+GGG + chr3.4:72733925-72733944 MS.gene29840:CDS 55.0%
TAAGAAGACGCCGGCAGCGA+AGG + chr3.4:72734227-72734246 MS.gene29840:CDS 60.0%
TTCGCTGCCGGCGTCTTCTT+AGG - chr3.4:72734228-72734247 None:intergenic 60.0%
! GGCGAAAGCCGCTTCTAAGG+TGG + chr3.4:72734248-72734267 MS.gene29840:CDS 60.0%
! GTTGGTGAGCCACAGTGGGA+GGG + chr3.4:72734408-72734427 MS.gene29840:CDS 60.0%
! TGTTGGTGAGCCACAGTGGG+AGG + chr3.4:72734407-72734426 MS.gene29840:CDS 60.0%
GCGGCTTTCGCCTTCGCTGC+CGG - chr3.4:72734240-72734259 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 72733877 72734494 72733877 ID=MS.gene29840
chr3.4 mRNA 72733877 72734494 72733877 ID=MS.gene29840.t1;Parent=MS.gene29840
chr3.4 exon 72733877 72734494 72733877 ID=MS.gene29840.t1.exon1;Parent=MS.gene29840.t1
chr3.4 CDS 72733877 72734494 72733877 ID=cds.MS.gene29840.t1;Parent=MS.gene29840.t1
Gene Sequence

>MS.gene29840

ATGAAGCATGTGGGTGGTAGTGTTTCAAAACCCACGAAGCTATACAGAGGAGTGAGACAAAGGCACTGGGGAAAATGGGTTGCTGAGATAAGACTACCTAAGAACCGTACGAGGTTATGGCTTGGTACCTTTGACACAGCTGAAGAAGCTGCTTTGGCTTATGATAAAGCTGCTTATAAGCTACGTGGTGACTTTGCTAGGTTAAATTTTCCAAATTTGAAACACCAAGGTTCAATTATTGGTGGTGAATTTGGTGAGTTTAAGCCTCTTCCTTCTTCTGTTGATGCTAAGCTTCAAGCTATTTGTGAAGGTTTAGCTGAGATGCAGAAACAGGGGAAGGCTGAGAAGCCTAAGAAGACGCCGGCAGCGAAGGCGAAAGCCGCTTCTAAGGTGGTTTCTAAGGAGTCTGTTGATGATTTGAAGAAGGATTCAGAGCCAGAGGAGTGTTGTAAGGTTGAAGCAGTTTCGGTGATTACTGAGAGTGAAGGTTCTGAAGGTTCTTCACCACTTTCTGATCTTACTTTTGGTGATGTTGGTGAGCCACAGTGGGAGGGTGATTCAGAAAATTTTAATTTGCTGAAGTACCCTTCTTATGAGATTGATTGGGATTCTCTGTGA
Protein sequence

>MS.gene29840.t1

MKHVGGSVSKPTKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLKHQGSIIGGEFGEFKPLPSSVDAKLQAICEGLAEMQKQGKAEKPKKTPAAKAKAASKVVSKESVDDLKKDSEPEECCKVEAVSVITESEGSEGSSPLSDLTFGDVGEPQWEGDSENFNLLKYPSYEIDWDSL