AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30001

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30001.t1 MTR_7g034535 83.333 702 46 2 10 640 3 704 0.0 1204
MS.gene30001.t1 MTR_4g005190 76.293 696 93 3 10 634 68 762 0.0 1095
MS.gene30001.t1 MTR_4g005270 73.352 698 114 3 10 636 68 764 0.0 1059
MS.gene30001.t1 MTR_0013s0230 73.276 696 115 2 10 634 68 763 0.0 1055
MS.gene30001.t1 MTR_8g017020 67.239 699 157 3 7 634 31 728 0.0 989
MS.gene30001.t1 MTR_8g016975 68.103 696 150 3 10 634 68 762 0.0 989
MS.gene30001.t1 MTR_8g016960 66.714 697 153 4 10 634 68 757 0.0 965
MS.gene30001.t1 MTR_3g436160 70.963 675 120 4 26 629 27 696 0.0 958
MS.gene30001.t1 MTR_4g005190 75.667 600 75 2 10 538 68 667 0.0 942
MS.gene30001.t1 MTR_6g093180 52.746 692 254 4 12 632 68 757 0.0 756
MS.gene30001.t1 MTR_6g034985 51.445 692 263 5 12 632 68 757 0.0 728
MS.gene30001.t1 MTR_5g008810 51.599 688 258 5 12 627 69 753 0.0 704
MS.gene30001.t1 MTR_6g035010 48.472 687 281 5 10 625 66 750 0.0 674
MS.gene30001.t1 MTR_6g088140 47.550 694 286 8 11 629 51 741 0.0 647
MS.gene30001.t1 MTR_6g093100 47.783 699 278 9 15 629 80 775 0.0 645
MS.gene30001.t1 MTR_7g062020 47.024 672 280 6 31 629 99 767 0.0 633
MS.gene30001.t1 MTR_6g088140 46.281 605 249 6 11 541 51 653 0.0 553
MS.gene30001.t1 MTR_8g016940 66.250 240 80 1 395 634 33 271 5.31e-110 332
MS.gene30001.t1 MTR_8g016570 58.108 74 26 1 567 635 28 101 1.03e-22 94.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30001.t1 AT1G78955 63.429 700 184 3 11 639 70 768 0.0 919
MS.gene30001.t1 AT1G78955 63.429 700 184 3 11 639 5 703 0.0 918
MS.gene30001.t1 AT1G78950 65.217 690 168 3 11 629 79 767 0.0 914
MS.gene30001.t1 AT1G78950 65.217 690 168 3 11 629 70 758 0.0 914
MS.gene30001.t1 AT1G78960 61.370 686 193 3 11 625 70 754 0.0 886
MS.gene30001.t1 AT1G78960 61.370 686 193 3 11 625 70 754 0.0 886
MS.gene30001.t1 AT1G78960 61.370 686 193 3 11 625 70 754 0.0 886
MS.gene30001.t1 AT1G66960 59.684 697 206 4 3 625 59 754 0.0 866
MS.gene30001.t1 AT1G66960 59.684 697 206 4 3 625 59 754 0.0 866
MS.gene30001.t1 AT1G66960 59.684 697 206 4 3 625 68 763 0.0 866
MS.gene30001.t1 AT1G66960 59.684 697 206 4 3 625 59 754 0.0 866
MS.gene30001.t1 AT1G78955 63.817 655 165 3 11 594 5 658 0.0 863
MS.gene30001.t1 AT1G78960 61.069 655 183 3 11 594 70 723 0.0 839
MS.gene30001.t1 AT1G78970 60.320 688 198 5 11 627 70 753 0.0 837
MS.gene30001.t1 AT1G78970 60.320 688 198 5 11 627 70 753 0.0 837
MS.gene30001.t1 AT1G78970 60.320 688 198 5 11 627 70 753 0.0 837
MS.gene30001.t1 AT1G78955 63.289 602 150 2 11 541 5 606 0.0 785
MS.gene30001.t1 AT1G78960 61.258 604 162 3 93 625 1 603 0.0 779
MS.gene30001.t1 AT1G78955 62.795 594 149 3 117 639 1 593 0.0 760
MS.gene30001.t1 AT5G36150 49.710 690 275 3 11 629 70 758 0.0 725
MS.gene30001.t1 AT5G36150 49.710 690 275 3 11 629 70 758 0.0 725
MS.gene30001.t1 AT5G48010 50.930 699 260 8 11 628 70 766 0.0 723
MS.gene30001.t1 AT2G07050 50.870 690 264 5 12 629 69 755 0.0 720
MS.gene30001.t1 AT1G78500 51.146 698 261 6 11 629 70 766 0.0 716
MS.gene30001.t1 AT1G78500 51.146 698 261 6 11 629 70 766 0.0 716
MS.gene30001.t1 AT4G15370 50.290 690 260 7 11 625 70 751 0.0 712
MS.gene30001.t1 AT4G15370 50.072 693 260 7 11 625 70 754 0.0 711
MS.gene30001.t1 AT4G15340 50.860 698 262 7 11 628 70 766 0.0 706
MS.gene30001.t1 AT5G48010 50.215 699 257 9 11 628 70 758 0.0 705
MS.gene30001.t1 AT5G42600 50.362 691 269 5 11 629 70 758 0.0 704
MS.gene30001.t1 AT2G07050 51.355 664 248 5 38 629 4 664 0.0 702
MS.gene30001.t1 AT3G45130 48.744 677 270 6 23 625 78 751 0.0 631
MS.gene30001.t1 AT3G45130 48.744 677 270 6 23 625 78 751 0.0 631
MS.gene30001.t1 AT3G45130 48.744 677 270 6 23 625 78 751 0.0 631
MS.gene30001.t1 AT3G45130 48.744 677 270 6 23 625 78 751 0.0 631
MS.gene30001.t1 AT3G45130 48.744 677 270 6 23 625 78 751 0.0 631
MS.gene30001.t1 AT3G29255 46.189 656 250 5 46 629 80 704 0.0 606
MS.gene30001.t1 AT4G15340 47.992 498 183 5 11 432 70 567 1.34e-160 473
MS.gene30001.t1 AT1G78480 44.521 146 49 3 13 142 48 177 5.05e-29 115

Find 139 sgRNAs with CRISPR-Local

Find 454 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATTCTTGCAGGGTAAAA+AGG 0.192507 7.1:-61675840 MS.gene30001:intron
TGGGGAATTTGCTTCATTTA+TGG 0.192754 7.1:-61675469 MS.gene30001:CDS
CTTTGATACAAAATCTGATT+TGG 0.226696 7.1:-61678688 MS.gene30001:CDS
AAATTTAAGCAAGCGATTAA+TGG 0.270561 7.1:-61680471 MS.gene30001:CDS
TATATATGCATGCGAATTCT+TGG 0.292075 7.1:-61679430 MS.gene30001:CDS
TCGTTGGCCTTTCAACAAAT+TGG 0.314876 7.1:-61678630 MS.gene30001:CDS
CGAACCCAGCATCCCATTCT+TGG 0.330599 7.1:+61676688 None:intergenic
ATAACTAAAGCTTGAATTGC+TGG 0.340316 7.1:+61675604 None:intergenic
ATGTCTATGTCTTACTTGTA+TGG 0.352358 7.1:-61678921 MS.gene30001:CDS
TTTGATACAAAATCTGATTT+GGG 0.357650 7.1:-61678687 MS.gene30001:CDS
TTTGTACAACATTTGATTGT+TGG 0.359225 7.1:+61675178 None:intergenic
TGGTTCATGGTATGGAAGTT+GGG 0.361550 7.1:-61675488 MS.gene30001:CDS
ATCTCTTTCTTCCTATGCTC+TGG 0.363167 7.1:+61675565 None:intergenic
CATTACGGGACATCTTGATT+TGG 0.363637 7.1:-61679708 MS.gene30001:CDS
GCCAATCACCCTCTTCCAAT+TGG 0.365781 7.1:+61674719 None:intergenic
CTTGGTGTATTTGATTGGTC+TGG 0.373298 7.1:-61679143 MS.gene30001:CDS
CCCAATTGGAAGAGGGTGAT+TGG 0.374695 7.1:-61674720 MS.gene30001:CDS
CATTGGCCTGCTCAAATTGC+TGG 0.379850 7.1:-61680348 MS.gene30001:CDS
CAGGTTAGGGACAACCCTTC+AGG 0.380759 7.1:-61676290 MS.gene30001:CDS
AGATCCTACAAATGGAAGTT+TGG 0.381029 7.1:+61680652 None:intergenic
ATACATACAATGTAGAGTTT+TGG 0.383069 7.1:-61676714 MS.gene30001:intron
TTAATTAACATGAACCTGTT+GGG 0.387219 7.1:+61674696 None:intergenic
AATTTCTTCAATTAAGTTTG+TGG 0.395135 7.1:+61676647 None:intergenic
ACAAAGAGAGGATGGTGGTT+GGG 0.397928 7.1:-61675353 MS.gene30001:CDS
TATGCTTCATTGTTACTTGA+AGG 0.399431 7.1:+61678594 None:intergenic
TTTACGAATCGCAACAGAAT+TGG 0.400070 7.1:+61675399 None:intergenic
CTTGTGCAAGAGCAAGAAAC+TGG 0.401454 7.1:-61679378 MS.gene30001:CDS
ATGGTTCATGGTATGGAAGT+TGG 0.403489 7.1:-61675489 MS.gene30001:CDS
AGATACTTGGTGTATTTGAT+TGG 0.408450 7.1:-61679148 MS.gene30001:CDS
GTGTAACACATATACCTTCA+TGG 0.413324 7.1:-61679339 MS.gene30001:CDS
TCGTTACATATATTGTCATC+AGG 0.428039 7.1:-61679654 MS.gene30001:intron
CTAATTGAACCTGGATGCAT+TGG 0.439001 7.1:+61679074 None:intergenic
CTCATGAGTTTAATTTATGC+TGG 0.439245 7.1:-61675144 MS.gene30001:CDS
ATTTCTCATCAATTCCCAAT+TGG 0.441683 7.1:-61674734 MS.gene30001:CDS
AACCATGGGGTCTGTCGAAA+AGG 0.444007 7.1:-61678540 MS.gene30001:intron
GGTAGCCAAGAATGGGATGC+TGG 0.444230 7.1:-61676693 MS.gene30001:CDS
CTTGTATGGGAAGAGGTTTG+TGG 0.445700 7.1:-61678907 MS.gene30001:CDS
CCAATCACCCTCTTCCAATT+GGG 0.447932 7.1:+61674720 None:intergenic
CTTGGTGGTTTAGCAGCTGC+TGG 0.449094 7.1:-61675433 MS.gene30001:CDS
TTTCTTTATCTGTAGATACT+TGG 0.461398 7.1:-61679161 MS.gene30001:intron
CAAAGAGAGGATGGTGGTTG+GGG 0.465183 7.1:-61675352 MS.gene30001:CDS
TGTAACACATATACCTTCAT+GGG 0.466293 7.1:-61679338 MS.gene30001:CDS
CTTAATGAAATCATGTCCTC+TGG 0.468515 7.1:+61676611 None:intergenic
CACCTTTGCACATAGGTGAC+GGG 0.471590 7.1:+61678806 None:intergenic
AAAGATGATGGTTCATGGTA+TGG 0.471672 7.1:-61675496 MS.gene30001:CDS
GAGTTTAATTTATGCTGGCC+AGG 0.472869 7.1:-61675139 MS.gene30001:intron
TATGTTCCATTGTCTTCCAC+TGG 0.474824 7.1:-61674242 MS.gene30001:CDS
TTGTATGGGAAGAGGTTTGT+GGG 0.474929 7.1:-61678906 MS.gene30001:CDS
ATCTCTTTGCGATACTCTTG+TGG 0.477953 7.1:+61679680 None:intergenic
AGAGGGTGATTGGCCCCAAC+AGG 0.478137 7.1:-61674710 MS.gene30001:intron
GAAGGAAGGATCCAAAACTC+TGG 0.482022 7.1:+61679104 None:intergenic
ATGCATCGTCATATTTCTAA+AGG 0.486909 7.1:-61676254 MS.gene30001:CDS
TCTCTTACCAATTTGTTGAA+AGG 0.487619 7.1:+61678623 None:intergenic
AAAAGGGTGGTATGTCATCA+TGG 0.489922 7.1:-61675823 MS.gene30001:CDS
AACCATTCTTGAGCTCGTGC+CGG 0.489934 7.1:+61675797 None:intergenic
TGCAAACTAGTGATGGTCAT+TGG 0.495361 7.1:-61680365 MS.gene30001:CDS
TATTTATTGTAGGGAATCAC+AGG 0.496137 7.1:-61674347 MS.gene30001:intron
TCATTTCTTCCAATGCATCC+AGG 0.497270 7.1:-61679083 MS.gene30001:intron
ATTTCTGATGGCACCGCAGA+TGG 0.501305 7.1:-61676194 MS.gene30001:CDS
TGTCTTACTTGTATGGGAAG+AGG 0.506519 7.1:-61678914 MS.gene30001:CDS
TGATTTCATTAAGAAATCTC+AGG 0.511905 7.1:-61676601 MS.gene30001:intron
TCTCTTTGCGATACTCTTGT+GGG 0.513688 7.1:+61679681 None:intergenic
ATGCTTCATTGTTACTTGAA+GGG 0.514618 7.1:+61678595 None:intergenic
GAAGAATGAAGATGGAGGGT+GGG 0.515233 7.1:-61679500 MS.gene30001:intron
GGATGCATTGGAAGAAATGA+AGG 0.515941 7.1:+61679086 None:intergenic
CATCAATTCCCAATTGGAAG+AGG 0.517752 7.1:-61674728 MS.gene30001:CDS
AAGGAAGGATCCAAAACTCT+GGG 0.518131 7.1:+61679105 None:intergenic
ACTCAGCTAAAGCCCACAAT+GGG 0.529293 7.1:+61674273 None:intergenic
GATTGTTGGCTTTCTTCAAG+TGG 0.529426 7.1:+61675192 None:intergenic
TGAAGAATGAAGATGGAGGG+TGG 0.532533 7.1:-61679501 MS.gene30001:intron
CAAATGTTGTACAAACTGCA+TGG 0.533252 7.1:-61675170 MS.gene30001:CDS
CACAAAGAGAGGATGGTGGT+TGG 0.535338 7.1:-61675354 MS.gene30001:CDS
CATCAGAAATTTGCCATCCA+TGG 0.535950 7.1:+61676207 None:intergenic
AAATGTTGTACAAACTGCAT+GGG 0.536757 7.1:-61675169 MS.gene30001:CDS
AATTAATTGTAGGTAAAATG+TGG 0.537747 7.1:-61678965 MS.gene30001:intron
GCATTGTCTTGACCTCCATC+AGG 0.541398 7.1:+61679400 None:intergenic
AAGAATGAAGATGGAGGGTG+GGG 0.542058 7.1:-61679499 MS.gene30001:CDS
TGACCTTCACCTTTGCACAT+AGG 0.543142 7.1:+61678799 None:intergenic
AGCCGGCACGAGCTCAAGAA+TGG 0.544550 7.1:-61675799 MS.gene30001:CDS
TATGAGTATGTTGAGTGCAC+TGG 0.545103 7.1:-61675628 MS.gene30001:CDS
TCCTACAAATGGAAGTTTGG+AGG 0.547027 7.1:+61680655 None:intergenic
TCACCTTTGCACATAGGTGA+CGG 0.548582 7.1:+61678805 None:intergenic
TGGTATGTCATCATGGGAGC+CGG 0.548872 7.1:-61675816 MS.gene30001:CDS
TGCATGCGAATTCTTGGTGA+AGG 0.550915 7.1:-61679424 MS.gene30001:CDS
ATACTCTTAAAATCTCCTGA+AGG 0.552047 7.1:+61676275 None:intergenic
CAGCACGATGAAGAGGAGTA+AGG 0.552188 7.1:+61674761 None:intergenic
TCTCTGATCAAGACCATGGA+TGG 0.553082 7.1:-61676220 MS.gene30001:CDS
AATGGTGTGAAGATAGAAGA+TGG 0.555542 7.1:-61680453 MS.gene30001:CDS
CTGAGCCACTTATCACTCGT+TGG 0.557395 7.1:-61678646 MS.gene30001:CDS
TAATTAACATGAACCTGTTG+GGG 0.559218 7.1:+61674697 None:intergenic
CACTAGTTTGCAATGCTGCT+AGG 0.560576 7.1:+61680376 None:intergenic
TGTCTATGTCTTACTTGTAT+GGG 0.563638 7.1:-61678920 MS.gene30001:CDS
AGCTACAACGACATTGAGAA+GGG 0.563777 7.1:-61680409 MS.gene30001:CDS
GGTTCATGGTATGGAAGTTG+GGG 0.567893 7.1:-61675487 MS.gene30001:CDS
GTCATATTTCTAAAGGCTCG+TGG 0.569948 7.1:-61676247 MS.gene30001:CDS
AATAGTCGATACATAACCAT+GGG 0.570508 7.1:-61678554 MS.gene30001:CDS
TACTCTTAAAATCTCCTGAA+GGG 0.572787 7.1:+61676276 None:intergenic
ATAGGACCAGCAATTTGAGC+AGG 0.576160 7.1:+61680342 None:intergenic
TCATGTCCTCTGGCAAGTGA+AGG 0.583648 7.1:+61676621 None:intergenic
GTAGCCAAGAATGGGATGCT+GGG 0.584565 7.1:-61676692 MS.gene30001:CDS
TCTTCTCACAACACAAAGAG+AGG 0.584977 7.1:-61675365 MS.gene30001:CDS
AAAGGGTGGTATGTCATCAT+GGG 0.588699 7.1:-61675822 MS.gene30001:CDS
AAAGGCCAACGAGTGATAAG+TGG 0.590254 7.1:+61678641 None:intergenic
CTCACAACACAAAGAGAGGA+TGG 0.591101 7.1:-61675361 MS.gene30001:CDS
GACTATTCTCATCCTCGTAG+TGG 0.592078 7.1:+61678570 None:intergenic
ATTTACCTTCAGACCATCTG+CGG 0.595501 7.1:+61676181 None:intergenic
GCAGCATTGCAAACTAGTGA+TGG 0.596816 7.1:-61680372 MS.gene30001:CDS
AGAAACTGGATTCGTGATCA+CGG 0.598192 7.1:-61679364 MS.gene30001:CDS
CATGGATGGCAAATTTCTGA+TGG 0.598582 7.1:-61676206 MS.gene30001:CDS
ATTCTTGGTGAAGGGCCTGA+TGG 0.599079 7.1:-61679415 MS.gene30001:CDS
TCTCTCAACTGTAATATGAG+TGG 0.603226 7.1:+61678873 None:intergenic
TACTCAGCTAAAGCCCACAA+TGG 0.603816 7.1:+61674272 None:intergenic
ATAAGCTATATCCAGAGCAT+AGG 0.604185 7.1:-61675576 MS.gene30001:CDS
AAGCTACAACGACATTGAGA+AGG 0.604574 7.1:-61680410 MS.gene30001:CDS
AGATAAGTATTCACCAAAGG+AGG 0.608286 7.1:+61680309 None:intergenic
CTTGGTGAAGGGCCTGATGG+AGG 0.612929 7.1:-61679412 MS.gene30001:CDS
AGCCCGTCACCTATGTGCAA+AGG 0.613669 7.1:-61678808 MS.gene30001:intron
ATCAATTCCCAATTGGAAGA+GGG 0.614491 7.1:-61674727 MS.gene30001:CDS
ACAAATGGAAGTTTGGAGGA+AGG 0.622507 7.1:+61680659 None:intergenic
GGGTGGGGTCTACACATTGA+GGG 0.631032 7.1:-61679484 MS.gene30001:CDS
TGGCACCGCAGATGGTCTGA+AGG 0.640126 7.1:-61676186 MS.gene30001:intron
AGGGTGGGGTCTACACATTG+AGG 0.641097 7.1:-61679485 MS.gene30001:CDS
ACTTTCTCTGATCAAGACCA+TGG 0.645283 7.1:-61676224 MS.gene30001:CDS
GCATGCGAATTCTTGGTGAA+GGG 0.645562 7.1:-61679423 MS.gene30001:CDS
GCATTGGAAGAAATGAAGGA+AGG 0.647604 7.1:+61679090 None:intergenic
TTAACTCCAGTGGAAGACAA+TGG 0.647779 7.1:+61674236 None:intergenic
GGAAGGATCCAAAACTCTGG+GGG 0.670148 7.1:+61679107 None:intergenic
GAATAGTCGATACATAACCA+TGG 0.670449 7.1:-61678555 MS.gene30001:CDS
GTTAAGTGCAGTACAAAACA+TGG 0.671218 7.1:+61679453 None:intergenic
AATGGAAGTTTGGAGGAAGG+AGG 0.674296 7.1:+61680662 None:intergenic
ATTAGTCCTTCACTTGCCAG+AGG 0.682770 7.1:-61676627 MS.gene30001:CDS
AATGTTGTACAAACTGCATG+GGG 0.691397 7.1:-61675168 MS.gene30001:CDS
GTAACACATATACCTTCATG+GGG 0.695399 7.1:-61679337 MS.gene30001:CDS
GCTACAACGACATTGAGAAG+GGG 0.704931 7.1:-61680408 MS.gene30001:CDS
AGGAAGGATCCAAAACTCTG+GGG 0.711582 7.1:+61679106 None:intergenic
ACAACACAAAGAGAGGATGG+TGG 0.742113 7.1:-61675358 MS.gene30001:CDS
AACTGGATTCGTGATCACGG+TGG 0.769493 7.1:-61679361 MS.gene30001:CDS
ATAGTCGATACATAACCATG+GGG 0.779304 7.1:-61678553 MS.gene30001:CDS
AATGAAGCATATCCACTACG+AGG 0.801868 7.1:-61678582 MS.gene30001:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATCAATGAAAAATAT+AGG + chr7.1:61678937-61678956 None:intergenic 10.0%
!! ATATATCAATGAAAAATATA+GGG + chr7.1:61678936-61678955 None:intergenic 10.0%
!! TAATACTTACATATTAAATA+AGG - chr7.1:61680206-61680225 MS.gene30001:intron 10.0%
!!! AATCTCATAATTTTTATTTT+AGG + chr7.1:61677494-61677513 None:intergenic 10.0%
!!! ATCTCATAATTTTTATTTTA+GGG + chr7.1:61677493-61677512 None:intergenic 10.0%
!!! ATGTATTTTTTATATCATAA+TGG - chr7.1:61674863-61674882 MS.gene30001:intron 10.0%
!!! CATTTTAATTATATTTTTCT+TGG + chr7.1:61680425-61680444 None:intergenic 10.0%
!!! GTCAAAATATTTTTTTTTTT+AGG - chr7.1:61679787-61679806 MS.gene30001:intron 10.0%
!!! TTTTTTTTTTTCTTTTTCAT+GGG + chr7.1:61674629-61674648 None:intergenic 10.0%
!! AAATAAGATCTATATTATGA+TGG - chr7.1:61677238-61677257 MS.gene30001:intron 15.0%
!! AACTATATACATGTTAATAA+TGG + chr7.1:61676438-61676457 None:intergenic 15.0%
!! AATAAAAAAACAAAACATTG+TGG - chr7.1:61680325-61680344 MS.gene30001:CDS 15.0%
!! AATCTTATGAAAAAGTTAAT+TGG - chr7.1:61676046-61676065 MS.gene30001:intron 15.0%
!! AGAAAAATAAATTTACAACT+TGG - chr7.1:61675031-61675050 MS.gene30001:intron 15.0%
!! ATAAAAAAACAAAACATTGT+GGG - chr7.1:61680326-61680345 MS.gene30001:CDS 15.0%
!! ATATATATTTGCATAACAAA+TGG + chr7.1:61675300-61675319 None:intergenic 15.0%
!! TATATATTTGCATAACAAAT+GGG + chr7.1:61675299-61675318 None:intergenic 15.0%
!!! AATAAAAGTATCAATTTCAT+TGG + chr7.1:61678569-61678588 None:intergenic 15.0%
!!! AATTTTGTCTTATTTATTGT+AGG - chr7.1:61680525-61680544 MS.gene30001:intron 15.0%
!!! AGAATATTTAAGATTAGAAT+AGG - chr7.1:61676655-61676674 MS.gene30001:CDS 15.0%
!!! ATTTTGTCTTATTTATTGTA+GGG - chr7.1:61680526-61680545 MS.gene30001:intron 15.0%
!!! CTTTTTTTTTTTCTTTTTCA+TGG + chr7.1:61674630-61674649 None:intergenic 15.0%
!!! GTTTAATTTTCGTAAATTAA+AGG + chr7.1:61678348-61678367 None:intergenic 15.0%
!!! TCTCATAATTTTTATTTTAG+GGG + chr7.1:61677492-61677511 None:intergenic 15.0%
!!! TTAGTATTTTCTTTTTCTAA+CGG + chr7.1:61674735-61674754 None:intergenic 15.0%
!!! TTATTTTCATGTGTAATTTT+TGG + chr7.1:61677224-61677243 None:intergenic 15.0%
!!! TTTTCACATTAATTAATTGT+AGG - chr7.1:61675907-61675926 MS.gene30001:intron 15.0%
!!! TTTTCATCAAAATTTACTTT+TGG - chr7.1:61679916-61679935 MS.gene30001:intron 15.0%
!! AATTAATTGTAGGTAAAATG+TGG - chr7.1:61675917-61675936 MS.gene30001:intron 20.0%
!! AATTTCTTCAATTAAGTTTG+TGG + chr7.1:61678238-61678257 None:intergenic 20.0%
!! AGAATATTCAAGATTAGAAT+AGG - chr7.1:61677958-61677977 MS.gene30001:intron 20.0%
!! ATATAGTAGTAAATAGTTAG+TGG + chr7.1:61675688-61675707 None:intergenic 20.0%
!! CTAGATTATACATGTAATAT+AGG - chr7.1:61678078-61678097 MS.gene30001:intron 20.0%
!! CTATATTACATGTATAATCT+AGG + chr7.1:61678080-61678099 None:intergenic 20.0%
!! CTCATATATAATACCTTAAA+AGG - chr7.1:61677052-61677071 MS.gene30001:intron 20.0%
!! CTTTAAATGATAACATACAT+AGG - chr7.1:61676113-61676132 MS.gene30001:intron 20.0%
!! GAAATACTTCAAAATTAAAC+AGG + chr7.1:61677638-61677657 None:intergenic 20.0%
!! TACTTACATATTAAATAAGG+AGG - chr7.1:61680209-61680228 MS.gene30001:intron 20.0%
!! TATTAAGTCAGATTGTAAAA+AGG + chr7.1:61678047-61678066 None:intergenic 20.0%
!! TCTTTCTAATTCTTGTATAT+AGG - chr7.1:61680088-61680107 MS.gene30001:intron 20.0%
!! TTAACATGTATATAGTTATC+AGG - chr7.1:61676441-61676460 MS.gene30001:intron 20.0%
!! TTAAGATTCATTTGCATTTA+TGG + chr7.1:61680051-61680070 None:intergenic 20.0%
!! TTTGATACAAAATCTGATTT+GGG - chr7.1:61676195-61676214 MS.gene30001:CDS 20.0%
!!! AAAATTGAGTTTTGATTTCA+TGG + chr7.1:61680466-61680485 None:intergenic 20.0%
!!! AAACAATAAAGAGTATTACA+GGG - chr7.1:61674657-61674676 MS.gene30001:intron 20.0%
!!! AAGAAAAAAGTAACAGATTT+TGG - chr7.1:61676678-61676697 MS.gene30001:CDS 20.0%
!!! AATTGATACTTTTATTTCAC+AGG - chr7.1:61678573-61678592 MS.gene30001:CDS 20.0%
!!! AATTTTCGTAAATTAAAGGA+AGG + chr7.1:61678344-61678363 None:intergenic 20.0%
!!! ATAATTATTATTTACTGGCT+TGG + chr7.1:61678434-61678453 None:intergenic 20.0%
!!! ATTTTTTACATTTAGGGTTT+AGG - chr7.1:61675589-61675608 MS.gene30001:CDS 20.0%
!!! GGTACAATTTTTTACATTTA+GGG - chr7.1:61675583-61675602 MS.gene30001:CDS 20.0%
!!! TATTGAAGTTGATAACAAAA+GGG + chr7.1:61674336-61674355 None:intergenic 20.0%
!!! TCCAAAATAATCTTTTTGAT+TGG + chr7.1:61677517-61677536 None:intergenic 20.0%
!!! TCCAATCAAAAAGATTATTT+TGG - chr7.1:61677513-61677532 MS.gene30001:intron 20.0%
!!! TTATTGAAGTTGATAACAAA+AGG + chr7.1:61674337-61674356 None:intergenic 20.0%
! AAACACTAACAAATTAAGGA+TGG - chr7.1:61674276-61674295 MS.gene30001:CDS 25.0%
! AAAGATCTTCCTGTATAATA+CGG + chr7.1:61676162-61676181 None:intergenic 25.0%
! AAATGATAACATACATAGGA+GGG - chr7.1:61676117-61676136 MS.gene30001:intron 25.0%
! AAATTTAAGCAAGCGATTAA+TGG - chr7.1:61674411-61674430 MS.gene30001:intron 25.0%
! ACAGAAACACTAACAAATTA+AGG - chr7.1:61674272-61674291 MS.gene30001:CDS 25.0%
! AGAAATTTGTGAATAGACAT+AGG + chr7.1:61676901-61676920 None:intergenic 25.0%
! ATGCAAATGAATCTTAACAT+TGG - chr7.1:61680054-61680073 MS.gene30001:intron 25.0%
! ATTAATTAACATGAACCTGT+TGG + chr7.1:61680190-61680209 None:intergenic 25.0%
! ATTTGATTATACAATGCTAC+TGG + chr7.1:61680308-61680327 None:intergenic 25.0%
! CAATACCGAAATTGATATAT+AGG - chr7.1:61680253-61680272 MS.gene30001:intron 25.0%
! CAGATAAAGAAAACATTTGA+AGG + chr7.1:61675713-61675732 None:intergenic 25.0%
! CTAAAGATCTTGTTGAATAT+GGG - chr7.1:61677308-61677327 MS.gene30001:intron 25.0%
! CTTTGATACAAAATCTGATT+TGG - chr7.1:61676194-61676213 MS.gene30001:CDS 25.0%
! GAACTTTATCTCAAATTTCA+TGG + chr7.1:61675342-61675361 None:intergenic 25.0%
! GAATGAAAGAAAAAGGTAAA+TGG + chr7.1:61679029-61679048 None:intergenic 25.0%
! TAAATGATAACATACATAGG+AGG - chr7.1:61676116-61676135 MS.gene30001:intron 25.0%
! TAAATTAATCACTACACAAG+TGG + chr7.1:61680368-61680387 None:intergenic 25.0%
! TACAATTTCTGCGAAAAATT+CGG + chr7.1:61679228-61679247 None:intergenic 25.0%
! TATGAAAAAAATACTCTCTC+CGG - chr7.1:61674806-61674825 MS.gene30001:intron 25.0%
! TCAAAAAGATCATGCTAAAT+TGG + chr7.1:61676820-61676839 None:intergenic 25.0%
! TCCTTCCTATATATCAATTT+CGG + chr7.1:61680261-61680280 None:intergenic 25.0%
! TCTAAAGATCTTGTTGAATA+TGG - chr7.1:61677307-61677326 MS.gene30001:intron 25.0%
! TGATTTCATTAAGAAATCTC+AGG - chr7.1:61678281-61678300 MS.gene30001:intron 25.0%
! TTAATTAACATGAACCTGTT+GGG + chr7.1:61680189-61680208 None:intergenic 25.0%
! TTTCTTTATCTGTAGATACT+TGG - chr7.1:61675721-61675740 MS.gene30001:intron 25.0%
! TTTGTACAACATTTGATTGT+TGG + chr7.1:61679707-61679726 None:intergenic 25.0%
!! AAGATTTTTACGTACCTTTT+TGG + chr7.1:61676793-61676812 None:intergenic 25.0%
!! AAGGAATATTATTGCAGTTT+TGG + chr7.1:61677557-61677576 None:intergenic 25.0%
!! ATACATACAATGTAGAGTTT+TGG - chr7.1:61678168-61678187 MS.gene30001:intron 25.0%
!! ATAGGAAGAAAGACAAATTT+TGG - chr7.1:61677976-61677995 MS.gene30001:intron 25.0%
!! CAAATCAGATTTTGTATCAA+AGG + chr7.1:61676196-61676215 None:intergenic 25.0%
!! GTTTTTAATAAGCTAAGAGT+AGG - chr7.1:61674598-61674617 MS.gene30001:intron 25.0%
!! TAGGAAGAAAGACAAATTTT+GGG - chr7.1:61677977-61677996 MS.gene30001:intron 25.0%
!!! AACAATAAAGAGTATTACAG+GGG - chr7.1:61674658-61674677 MS.gene30001:intron 25.0%
!!! AACTCAATATGAACCTTTTT+TGG + chr7.1:61679575-61679594 None:intergenic 25.0%
!!! ACTCAATATGAACCTTTTTT+GGG + chr7.1:61679574-61679593 None:intergenic 25.0%
!!! AGGTTAATTGTTTTTAGCTA+AGG - chr7.1:61674686-61674705 MS.gene30001:intron 25.0%
!!! ATACTTTTATTTCACAGGTT+AGG - chr7.1:61678578-61678597 MS.gene30001:CDS 25.0%
!!! ATTGAAGTTGATAACAAAAG+GGG + chr7.1:61674335-61674354 None:intergenic 25.0%
!!! CAACTTTGTTATTTATTTGC+AGG - chr7.1:61679190-61679209 MS.gene30001:intron 25.0%
!!! CATATTTCATTTTTGCTTCT+TGG - chr7.1:61674365-61674384 MS.gene30001:intron 25.0%
!!! CGGTACAATTTTTTACATTT+AGG - chr7.1:61675582-61675601 MS.gene30001:CDS 25.0%
!!! GAAACAATAAAGAGTATTAC+AGG - chr7.1:61674656-61674675 MS.gene30001:intron 25.0%
!!! GGTTAATTGTTTTTAGCTAA+GGG - chr7.1:61674687-61674706 MS.gene30001:intron 25.0%
!!! GGTTTTTTGTGTTTACATTA+CGG - chr7.1:61675159-61675178 MS.gene30001:CDS 25.0%
!!! GTTTTTTGTGTTTACATTAC+GGG - chr7.1:61675160-61675179 MS.gene30001:CDS 25.0%
!!! TACTTTTATTTCACAGGTTA+GGG - chr7.1:61678579-61678598 MS.gene30001:CDS 25.0%
!!! TCTTCTTTCTTTTTAGCATA+TGG + chr7.1:61677384-61677403 None:intergenic 25.0%
!!! TTTCTTTTGAAGAATGAAGA+TGG - chr7.1:61675374-61675393 MS.gene30001:CDS 25.0%
!!! TTTTTTCTTTTTCATGGGTT+AGG + chr7.1:61674624-61674643 None:intergenic 25.0%
AAAAACAAAACATTGTGGGT+AGG - chr7.1:61680330-61680349 MS.gene30001:CDS 30.0%
AAATGTTGTACAAACTGCAT+GGG - chr7.1:61679713-61679732 MS.gene30001:CDS 30.0%
AATAGTCGATACATAACCAT+GGG - chr7.1:61676328-61676347 MS.gene30001:intron 30.0%
AATGATAACATACATAGGAG+GGG - chr7.1:61676118-61676137 MS.gene30001:intron 30.0%
ACCCTTCACAATTTAAGTAA+GGG + chr7.1:61676876-61676895 None:intergenic 30.0%
ACCGAAATTGATATATAGGA+AGG - chr7.1:61680257-61680276 MS.gene30001:intron 30.0%
ACCTTATATATACTTGAGAC+CGG + chr7.1:61674828-61674847 None:intergenic 30.0%
ACTTAGTATAAACCTGGAAA+TGG - chr7.1:61677018-61677037 MS.gene30001:intron 30.0%
AGTCAAAAGTAAGTAACAAG+TGG + chr7.1:61675107-61675126 None:intergenic 30.0%
ATAACTAAAGCTTGAATTGC+TGG + chr7.1:61679281-61679300 None:intergenic 30.0%
ATACTCTTAAAATCTCCTGA+AGG + chr7.1:61678610-61678629 None:intergenic 30.0%
ATCCCTTACTTAAATTGTGA+AGG - chr7.1:61676871-61676890 MS.gene30001:intron 30.0%
ATGTCTATGTCTTACTTGTA+TGG - chr7.1:61675961-61675980 MS.gene30001:intron 30.0%
ATTCTGTTATTGCTTCACAA+AGG - chr7.1:61678015-61678034 MS.gene30001:intron 30.0%
ATTGAATAGTAGAACTTTCC+TGG + chr7.1:61678907-61678926 None:intergenic 30.0%
ATTGTGAGCTAAGCATAAAT+AGG + chr7.1:61680237-61680256 None:intergenic 30.0%
ATTTAAGTAAGGGATACATC+AGG + chr7.1:61676866-61676885 None:intergenic 30.0%
ATTTCTCATCAATTCCCAAT+TGG - chr7.1:61680148-61680167 MS.gene30001:intron 30.0%
CAAAGATAAGTATTCACCAA+AGG + chr7.1:61674579-61674598 None:intergenic 30.0%
CACCAAAGAGTTTATATTTG+TGG + chr7.1:61678783-61678802 None:intergenic 30.0%
CACCACAAATATAAACTCTT+TGG - chr7.1:61678778-61678797 MS.gene30001:intron 30.0%
CATAATCAACTAATTGAACC+TGG + chr7.1:61675820-61675839 None:intergenic 30.0%
CATCAATTACATACCAACAA+TGG + chr7.1:61677740-61677759 None:intergenic 30.0%
CATTGTTGGTATGTAATTGA+TGG - chr7.1:61677738-61677757 MS.gene30001:intron 30.0%
CTGTATAATACGGCATAAAA+TGG + chr7.1:61676152-61676171 None:intergenic 30.0%
GAAGATACACAAAAAGATGA+TGG - chr7.1:61679374-61679393 MS.gene30001:CDS 30.0%
GTAAATTAAAGGAAGGAGAA+CGG + chr7.1:61678337-61678356 None:intergenic 30.0%
GTATAGAGATTTCATTCACT+TGG + chr7.1:61677124-61677143 None:intergenic 30.0%
GTATGCTCTTCATGATTTAA+AGG - chr7.1:61679765-61679784 MS.gene30001:intron 30.0%
GTGAATTTGTATGCTGAAAT+TGG + chr7.1:61675277-61675296 None:intergenic 30.0%
GTTGAATATGGGTGTTTAAA+GGG - chr7.1:61677319-61677338 MS.gene30001:intron 30.0%
TAATTAACATGAACCTGTTG+GGG + chr7.1:61680188-61680207 None:intergenic 30.0%
TACAAGTAACATGCTAAGTA+AGG - chr7.1:61674947-61674966 MS.gene30001:intron 30.0%
TACTCTTAAAATCTCCTGAA+GGG + chr7.1:61678609-61678628 None:intergenic 30.0%
TATATATGCATGCGAATTCT+TGG - chr7.1:61675452-61675471 MS.gene30001:CDS 30.0%
TATTTATTGTAGGGAATCAC+AGG - chr7.1:61680535-61680554 MS.gene30001:intron 30.0%
TCAAATTTCATGGCTAATCA+AGG + chr7.1:61675332-61675351 None:intergenic 30.0%
TCCCTTACTTAAATTGTGAA+GGG - chr7.1:61676872-61676891 MS.gene30001:intron 30.0%
TCGGATAAACATGATTCATT+GGG + chr7.1:61678372-61678391 None:intergenic 30.0%
TCGTTACATATATTGTCATC+AGG - chr7.1:61675228-61675247 MS.gene30001:intron 30.0%
TGCATTTATGGTAATAGTTG+TGG + chr7.1:61680039-61680058 None:intergenic 30.0%
TGTAACACATATACCTTCAT+GGG - chr7.1:61675544-61675563 MS.gene30001:CDS 30.0%
TGTCTATGTCTTACTTGTAT+GGG - chr7.1:61675962-61675981 MS.gene30001:intron 30.0%
TGTTGAATATGGGTGTTTAA+AGG - chr7.1:61677318-61677337 MS.gene30001:intron 30.0%
TTAGCACACATATTGTTCAA+AGG + chr7.1:61678537-61678556 None:intergenic 30.0%
TTCGGATAAACATGATTCAT+TGG + chr7.1:61678373-61678392 None:intergenic 30.0%
TTCTGTTATTGCTTCACAAA+GGG - chr7.1:61678016-61678035 MS.gene30001:intron 30.0%
TTGAGATAAAGTTCTTCATG+TGG - chr7.1:61675348-61675367 MS.gene30001:CDS 30.0%
TTGGCATGTTTAGACAAAAT+TGG - chr7.1:61677927-61677946 MS.gene30001:intron 30.0%
TTTATGTATGCTTGCTTGTT+GGG - chr7.1:61676465-61676484 MS.gene30001:intron 30.0%
! AACTGTTTCTCACTCAAATT+AGG - chr7.1:61680009-61680028 MS.gene30001:intron 30.0%
! ATACATCAGGTTGCATAAAT+AGG + chr7.1:61676853-61676872 None:intergenic 30.0%
! ATAGAGATATTTTCCCATTG+TGG - chr7.1:61680596-61680615 MS.gene30001:intron 30.0%
! ATCTATATTATGATGGAGAC+CGG - chr7.1:61677245-61677264 MS.gene30001:intron 30.0%
! ATGCATCGTCATATTTCTAA+AGG - chr7.1:61678628-61678647 MS.gene30001:CDS 30.0%
! ATGCTTCATTGTTACTTGAA+GGG + chr7.1:61676290-61676309 None:intergenic 30.0%
! ATTCTTCTTCTTTGGTAACT+TGG - chr7.1:61675065-61675084 MS.gene30001:intron 30.0%
! CATCTTTTTGTGTATCTTCA+AGG + chr7.1:61679373-61679392 None:intergenic 30.0%
! CATTTTATGCCGTATTATAC+AGG - chr7.1:61676150-61676169 MS.gene30001:intron 30.0%
! CTCATGAGTTTAATTTATGC+TGG - chr7.1:61679738-61679757 MS.gene30001:intron 30.0%
! CTTTTTCTTTCATTCTTGCA+GGG - chr7.1:61679034-61679053 MS.gene30001:intron 30.0%
! TACATCAGGTTGCATAAATA+GGG + chr7.1:61676852-61676871 None:intergenic 30.0%
! TAGAGATATTTTCCCATTGT+GGG - chr7.1:61680597-61680616 MS.gene30001:intron 30.0%
! TATGCTTCATTGTTACTTGA+AGG + chr7.1:61676291-61676310 None:intergenic 30.0%
! TCAGATTTTGTATCAAAGGA+CGG + chr7.1:61676192-61676211 None:intergenic 30.0%
! TGATCTAGTTGGAATTTTGT+TGG + chr7.1:61677440-61677459 None:intergenic 30.0%
! TGTAGTGTTTAGTTTAAGAG+AGG + chr7.1:61675009-61675028 None:intergenic 30.0%
! TGTTACTTGTAATGCAAGTA+AGG + chr7.1:61674938-61674957 None:intergenic 30.0%
!! AGATACTTGGTGTATTTGAT+TGG - chr7.1:61675734-61675753 MS.gene30001:intron 30.0%
!! TCTCTTACCAATTTGTTGAA+AGG + chr7.1:61676262-61676281 None:intergenic 30.0%
!! TGCTAAAACTAGTTGTTTTG+TGG + chr7.1:61676770-61676789 None:intergenic 30.0%
!! TTGAAGTTGATAACAAAAGG+GGG + chr7.1:61674334-61674353 None:intergenic 30.0%
!! TTTTGAAGAATGAAGATGGA+GGG - chr7.1:61675378-61675397 MS.gene30001:CDS 30.0%
!! TTTTGACTATTTGATCAAGC+TGG - chr7.1:61675119-61675138 MS.gene30001:intron 30.0%
!!! AACTAGTTTTAGCACCAAAA+AGG - chr7.1:61676776-61676795 MS.gene30001:intron 30.0%
!!! TATGGTACTTATTTTGCTCT+TGG - chr7.1:61679431-61679450 MS.gene30001:CDS 30.0%
!!! TGTTTTTAGCTAAGGGATAA+AGG - chr7.1:61674694-61674713 MS.gene30001:intron 30.0%
!!! TTTTTCAAGTTTAACTCCAG+TGG + chr7.1:61680659-61680678 None:intergenic 30.0%
AAAAAATTGTACCGAAAGCC+AGG + chr7.1:61675576-61675595 None:intergenic 35.0%
AAAGGAGGAGTGAAAAACAT+AGG + chr7.1:61674561-61674580 None:intergenic 35.0%
AAGGATTCACCAGAAAAATC+AGG + chr7.1:61677769-61677788 None:intergenic 35.0%
AATACCTTTCTCCTTCATGA+AGG - chr7.1:61677801-61677820 MS.gene30001:intron 35.0%
AATGGTGTGAAGATAGAAGA+TGG - chr7.1:61674429-61674448 MS.gene30001:intron 35.0%
AATGTTGTACAAACTGCATG+GGG - chr7.1:61679714-61679733 MS.gene30001:CDS 35.0%
AATTTCTGCGAAAAATTCGG+TGG + chr7.1:61679225-61679244 None:intergenic 35.0%
ACAGAAATGGTTCAAGAAAG+TGG + chr7.1:61677714-61677733 None:intergenic 35.0%
ACTGAATCATATAACCTCTC+TGG + chr7.1:61678866-61678885 None:intergenic 35.0%
ACTTTGTCAAGACACTCTAA+TGG - chr7.1:61680396-61680415 MS.gene30001:CDS 35.0%
AGATAAAGTTCTTCATGTGG+TGG - chr7.1:61675351-61675370 MS.gene30001:CDS 35.0%
AGATAAGTATTCACCAAAGG+AGG + chr7.1:61674576-61674595 None:intergenic 35.0%
AGATCCTACAAATGGAAGTT+TGG + chr7.1:61674233-61674252 None:intergenic 35.0%
AGTATAAACCTGGAAATGGA+AGG - chr7.1:61677022-61677041 MS.gene30001:intron 35.0%
ATAAGCTATATCCAGAGCAT+AGG - chr7.1:61679306-61679325 MS.gene30001:intron 35.0%
ATACCAATTTCAAGCATCAG+TGG + chr7.1:61677086-61677105 None:intergenic 35.0%
ATAGTCGATACATAACCATG+GGG - chr7.1:61676329-61676348 MS.gene30001:intron 35.0%
ATCAATTCCCAATTGGAAGA+GGG - chr7.1:61680155-61680174 MS.gene30001:intron 35.0%
ATTACTCAAGACCTTCATGA+AGG + chr7.1:61677815-61677834 None:intergenic 35.0%
ATTTCTGCGAAAAATTCGGT+GGG + chr7.1:61679224-61679243 None:intergenic 35.0%
CAAATGTTGTACAAACTGCA+TGG - chr7.1:61679712-61679731 MS.gene30001:CDS 35.0%
CAAGAACTATTCATGTTGCA+AGG + chr7.1:61677201-61677220 None:intergenic 35.0%
CACCCTTCACAATTTAAGTA+AGG + chr7.1:61676877-61676896 None:intergenic 35.0%
CACTTCACTTAGTATAAACC+TGG - chr7.1:61677012-61677031 MS.gene30001:intron 35.0%
CCTGCAAGAATGAAAGAAAA+AGG + chr7.1:61679036-61679055 None:intergenic 35.0%
CGAAGTTAATGAAGTTCACT+GGG + chr7.1:61677273-61677292 None:intergenic 35.0%
CTATCTTTCATGCCCAAAAA+AGG - chr7.1:61679559-61679578 MS.gene30001:intron 35.0%
CTCAAGAATGGTTAGAAGTA+AGG - chr7.1:61679095-61679114 MS.gene30001:CDS 35.0%
CTGGATGAAACACAAATTTC+AGG - chr7.1:61675138-61675157 MS.gene30001:intron 35.0%
CTTAATGAAATCATGTCCTC+TGG + chr7.1:61678274-61678293 None:intergenic 35.0%
CTTTATGTATGCTTGCTTGT+TGG - chr7.1:61676464-61676483 MS.gene30001:intron 35.0%
CTTTGTCAAGACACTCTAAT+GGG - chr7.1:61680397-61680416 MS.gene30001:CDS 35.0%
GAATAGTCGATACATAACCA+TGG - chr7.1:61676327-61676346 MS.gene30001:intron 35.0%
GCACACATAGAATAACACAA+GGG - chr7.1:61674897-61674916 MS.gene30001:intron 35.0%
GTAACACATATACCTTCATG+GGG - chr7.1:61675545-61675564 MS.gene30001:CDS 35.0%
GTGTAACACATATACCTTCA+TGG - chr7.1:61675543-61675562 MS.gene30001:CDS 35.0%
GTGTCTTGACAAAGTTAAGA+TGG + chr7.1:61680391-61680410 None:intergenic 35.0%
GTTAAGTGCAGTACAAAACA+TGG + chr7.1:61675432-61675451 None:intergenic 35.0%
TACCAAAGAAGAAGAATGCA+CGG + chr7.1:61675062-61675081 None:intergenic 35.0%
TACCAATTTCAAGCATCAGT+GGG + chr7.1:61677085-61677104 None:intergenic 35.0%
TATTTGTGGGTTTCAGAAGA+TGG - chr7.1:61676541-61676560 MS.gene30001:intron 35.0%
TCATTCTTGCAGGGTAAAAA+GGG - chr7.1:61679043-61679062 MS.gene30001:intron 35.0%
TCCGGTCTCAAGTATATATA+AGG - chr7.1:61674824-61674843 MS.gene30001:intron 35.0%
TCGAAGTTAATGAAGTTCAC+TGG + chr7.1:61677274-61677293 None:intergenic 35.0%
TCTCTCAACTGTAATATGAG+TGG + chr7.1:61676012-61676031 None:intergenic 35.0%
TGGATGATAGATCCTACAAA+TGG + chr7.1:61674241-61674260 None:intergenic 35.0%
TTCATTCTTGCAGGGTAAAA+AGG - chr7.1:61679042-61679061 MS.gene30001:intron 35.0%
TTGTCTAAACATGCCAACAT+TGG + chr7.1:61677924-61677943 None:intergenic 35.0%
TTTACGAATCGCAACAGAAT+TGG + chr7.1:61679486-61679505 None:intergenic 35.0%
TTTGTCAAGACACTCTAATG+GGG - chr7.1:61680398-61680417 MS.gene30001:CDS 35.0%
! AAAGATGATGGTTCATGGTA+TGG - chr7.1:61679386-61679405 MS.gene30001:CDS 35.0%
! AGATTTTGTATCAAAGGACG+GGG + chr7.1:61676190-61676209 None:intergenic 35.0%
! CACAAAAAGATGATGGTTCA+TGG - chr7.1:61679381-61679400 MS.gene30001:CDS 35.0%
! CAGATTTTGTATCAAAGGAC+GGG + chr7.1:61676191-61676210 None:intergenic 35.0%
! CCTTTTTCTTTCATTCTTGC+AGG - chr7.1:61679033-61679052 MS.gene30001:intron 35.0%
! CTAGTTGGAATTTTGTTGGA+AGG + chr7.1:61677436-61677455 None:intergenic 35.0%
! TAAATCATGAAGAGCATACC+TGG + chr7.1:61679764-61679783 None:intergenic 35.0%
! TATGTTTTTCACTCCTCCTT+TGG - chr7.1:61674560-61674579 MS.gene30001:intron 35.0%
! TATTTTCTCTCGTTTCTTCG+TGG + chr7.1:61675652-61675671 None:intergenic 35.0%
! TCTGAAACCCACAAATAATC+CGG + chr7.1:61676538-61676557 None:intergenic 35.0%
! TGGGGAATTTGCTTCATTTA+TGG - chr7.1:61679413-61679432 MS.gene30001:CDS 35.0%
! TTCATGAAGGAGAAAGGTAT+TGG + chr7.1:61677802-61677821 None:intergenic 35.0%
! TTTTAGCATATGGACGATTG+TGG + chr7.1:61677374-61677393 None:intergenic 35.0%
! TTTTTGCTTCTTGGCATTGT+AGG - chr7.1:61674374-61674393 MS.gene30001:intron 35.0%
!! ATTTTAGGGGATGACAAAGA+TGG + chr7.1:61677479-61677498 None:intergenic 35.0%
!! CGAAGCTTTGAAACAACTAA+AGG + chr7.1:61676954-61676973 None:intergenic 35.0%
!! CTTTTGAAGAATGAAGATGG+AGG - chr7.1:61675377-61675396 MS.gene30001:CDS 35.0%
!! TGAAGTTGATAACAAAAGGG+GGG + chr7.1:61674333-61674352 None:intergenic 35.0%
!! TTTCAAGAAGCATCTTGCTA+GGG - chr7.1:61676510-61676529 MS.gene30001:intron 35.0%
!!! GATTATTTTGGATAAAGCCG+AGG - chr7.1:61677525-61677544 MS.gene30001:intron 35.0%
AAAAGGGTGGTATGTCATCA+TGG - chr7.1:61679059-61679078 MS.gene30001:intron 40.0%
AAAGGGTGGTATGTCATCAT+GGG - chr7.1:61679060-61679079 MS.gene30001:intron 40.0%
AAGACCTTCATGAAGGAGAA+AGG + chr7.1:61677808-61677827 None:intergenic 40.0%
AAGCTACAACGACATTGAGA+AGG - chr7.1:61674472-61674491 MS.gene30001:intron 40.0%
AAGGAAGGATCCAAAACTCT+GGG + chr7.1:61675780-61675799 None:intergenic 40.0%
AATGAAGCATATCCACTACG+AGG - chr7.1:61676300-61676319 MS.gene30001:intron 40.0%
ACAAATGGAAGTTTGGAGGA+AGG + chr7.1:61674226-61674245 None:intergenic 40.0%
ACCAAAGAAGAAGAATGCAC+GGG + chr7.1:61675061-61675080 None:intergenic 40.0%
ACTTTCTCTGATCAAGACCA+TGG - chr7.1:61678658-61678677 MS.gene30001:CDS 40.0%
AGAAACTGGATTCGTGATCA+CGG - chr7.1:61675518-61675537 MS.gene30001:CDS 40.0%
AGAGATTGTGGGTGAAAAGA+TGG - chr7.1:61678838-61678857 MS.gene30001:CDS 40.0%
AGCTACAACGACATTGAGAA+GGG - chr7.1:61674473-61674492 MS.gene30001:intron 40.0%
AGTTGTGTGCAGAGGATATT+TGG + chr7.1:61679993-61680012 None:intergenic 40.0%
ATCTCTTTCTTCCTATGCTC+TGG + chr7.1:61679320-61679339 None:intergenic 40.0%
ATCTCTTTGCGATACTCTTG+TGG + chr7.1:61675205-61675224 None:intergenic 40.0%
ATGGTTCATGGTATGGAAGT+TGG - chr7.1:61679393-61679412 MS.gene30001:CDS 40.0%
ATTCTTTAACTAATGCCCCG+AGG + chr7.1:61679830-61679849 None:intergenic 40.0%
ATTTACCTTCAGACCATCTG+CGG + chr7.1:61678704-61678723 None:intergenic 40.0%
CATCAATTCCCAATTGGAAG+AGG - chr7.1:61680154-61680173 MS.gene30001:intron 40.0%
CATCAGAAATTTGCCATCCA+TGG + chr7.1:61678678-61678697 None:intergenic 40.0%
CATGGATGGCAAATTTCTGA+TGG - chr7.1:61678676-61678695 MS.gene30001:CDS 40.0%
CATTACGGGACATCTTGATT+TGG - chr7.1:61675174-61675193 MS.gene30001:CDS 40.0%
CGCACACATAGAATAACACA+AGG - chr7.1:61674896-61674915 MS.gene30001:intron 40.0%
CTAATTGAACCTGGATGCAT+TGG + chr7.1:61675811-61675830 None:intergenic 40.0%
CTGAAACCCACAAATAATCC+GGG + chr7.1:61676537-61676556 None:intergenic 40.0%
GAAAGTGGAATTGCCAATGT+TGG + chr7.1:61677699-61677718 None:intergenic 40.0%
GCATTGGAAGAAATGAAGGA+AGG + chr7.1:61675795-61675814 None:intergenic 40.0%
GGATGCATTGGAAGAAATGA+AGG + chr7.1:61675799-61675818 None:intergenic 40.0%
TAATGAAGTTCACTGGGATC+CGG + chr7.1:61677267-61677286 None:intergenic 40.0%
TAGTTTAAGAGAGGACTGCT+AGG + chr7.1:61675000-61675019 None:intergenic 40.0%
TATGAGTATGTTGAGTGCAC+TGG - chr7.1:61679254-61679273 MS.gene30001:intron 40.0%
TATGTTCCATTGTCTTCCAC+TGG - chr7.1:61680640-61680659 MS.gene30001:intron 40.0%
TCATTTCTTCCAATGCATCC+AGG - chr7.1:61675799-61675818 MS.gene30001:CDS 40.0%
TCCTACAAATGGAAGTTTGG+AGG + chr7.1:61674230-61674249 None:intergenic 40.0%
TCCTCCAAACTTCCATTTGT+AGG - chr7.1:61674226-61674245 MS.gene30001:CDS 40.0%
TCTCTTTGCGATACTCTTGT+GGG + chr7.1:61675204-61675223 None:intergenic 40.0%
TCTTCTCACAACACAAAGAG+AGG - chr7.1:61679517-61679536 MS.gene30001:intron 40.0%
TGCAAACTAGTGATGGTCAT+TGG - chr7.1:61674517-61674536 MS.gene30001:intron 40.0%
TGGTTCATGGTATGGAAGTT+GGG - chr7.1:61679394-61679413 MS.gene30001:CDS 40.0%
TGTCTTACTTGTATGGGAAG+AGG - chr7.1:61675968-61675987 MS.gene30001:intron 40.0%
TTAACTCCAGTGGAAGACAA+TGG + chr7.1:61680649-61680668 None:intergenic 40.0%
TTGTATGGGAAGAGGTTTGT+GGG - chr7.1:61675976-61675995 MS.gene30001:intron 40.0%
TTGTTTGACCATCAAACTCC+TGG - chr7.1:61677148-61677167 MS.gene30001:intron 40.0%
! AATTTTGCAGCACGATGAAG+AGG + chr7.1:61680131-61680150 None:intergenic 40.0%
! AGAGTATTACAGGGGATAGT+AGG - chr7.1:61674666-61674685 MS.gene30001:intron 40.0%
! ATCTTTTCACCCACAATCTC+TGG + chr7.1:61678839-61678858 None:intergenic 40.0%
! ATGGCTGATCCTGATTTTTC+TGG - chr7.1:61677757-61677776 MS.gene30001:intron 40.0%
! CTTGGTGTATTTGATTGGTC+TGG - chr7.1:61675739-61675758 MS.gene30001:intron 40.0%
! GAGTTTAATTTATGCTGGCC+AGG - chr7.1:61679743-61679762 MS.gene30001:intron 40.0%
! GGAGTTTGATGGTCAAACAA+AGG + chr7.1:61677148-61677167 None:intergenic 40.0%
! GTCATATTTCTAAAGGCTCG+TGG - chr7.1:61678635-61678654 MS.gene30001:CDS 40.0%
! GTTGGAATTTTGTTGGAAGG+AGG + chr7.1:61677433-61677452 None:intergenic 40.0%
! TGTTTCTGTGCAATGCATGA+TGG + chr7.1:61674261-61674280 None:intergenic 40.0%
!! AGAGTTTTGGTAGCCAAGAA+TGG - chr7.1:61678181-61678200 MS.gene30001:intron 40.0%
!! AGGTATTGGTTGGGAAAAGA+AGG + chr7.1:61677788-61677807 None:intergenic 40.0%
!! CTTTCAAGAAGCATCTTGCT+AGG - chr7.1:61676509-61676528 MS.gene30001:intron 40.0%
!! GAAGGAGAAAGGTATTGGTT+GGG + chr7.1:61677797-61677816 None:intergenic 40.0%
!! GAGTTTTGGTAGCCAAGAAT+GGG - chr7.1:61678182-61678201 MS.gene30001:intron 40.0%
!! GATTGTTGGCTTTCTTCAAG+TGG + chr7.1:61679693-61679712 None:intergenic 40.0%
!! GGTTCTCATTTTGGTGACAA+AGG + chr7.1:61677576-61677595 None:intergenic 40.0%
!! TCGTTGGCCTTTCAACAAAT+TGG - chr7.1:61676252-61676271 MS.gene30001:CDS 40.0%
!! TGAAGGAGAAAGGTATTGGT+TGG + chr7.1:61677798-61677817 None:intergenic 40.0%
!! TGAAGTGTTGATCGAAGAAG+TGG + chr7.1:61676999-61677018 None:intergenic 40.0%
!! TGGTAACTTGGAAGTGTCAA+CGG - chr7.1:61675077-61675096 MS.gene30001:intron 40.0%
!! TTCTTGAAAGCATCTCCATC+TGG + chr7.1:61676499-61676518 None:intergenic 40.0%
!!! GGTACTTATTTTGCTCTTGG+TGG - chr7.1:61679434-61679453 MS.gene30001:CDS 40.0%
!!! TGCAGTTTTGGTTAAGTCCT+CGG + chr7.1:61677545-61677564 None:intergenic 40.0%
!!! TGCTACTCTGGTTCTCATTT+TGG + chr7.1:61677585-61677604 None:intergenic 40.0%
AAAGGCCAACGAGTGATAAG+TGG + chr7.1:61676244-61676263 None:intergenic 45.0%
AAGAATGAAGATGGAGGGTG+GGG - chr7.1:61675383-61675402 MS.gene30001:CDS 45.0%
AAGCTTCGCCTCTGTCTTTA+AGG - chr7.1:61676966-61676985 MS.gene30001:intron 45.0%
AATGATAACCAGTGCCCCAA+GGG + chr7.1:61679956-61679975 None:intergenic 45.0%
AATGGAAGTTTGGAGGAAGG+AGG + chr7.1:61674223-61674242 None:intergenic 45.0%
AATGTTGCCTCCAGAGATTG+TGG - chr7.1:61678826-61678845 MS.gene30001:CDS 45.0%
ACAACACAAAGAGAGGATGG+TGG - chr7.1:61679524-61679543 MS.gene30001:intron 45.0%
ACCATCAAACTCCTGGTGAT+AGG - chr7.1:61677155-61677174 MS.gene30001:intron 45.0%
ACCTATCACCAGGAGTTTGA+TGG + chr7.1:61677159-61677178 None:intergenic 45.0%
ACTCAGCTAAAGCCCACAAT+GGG + chr7.1:61680612-61680631 None:intergenic 45.0%
AGAAGATGGAATGACCATGC+AGG - chr7.1:61676555-61676574 MS.gene30001:intron 45.0%
AGGAAGGATCCAAAACTCTG+GGG + chr7.1:61675779-61675798 None:intergenic 45.0%
AGGTGTGTGAATTCGTGAGT+AGG + chr7.1:61677618-61677637 None:intergenic 45.0%
AGTGGAATTGCCAATGTTGG+AGG + chr7.1:61677696-61677715 None:intergenic 45.0%
ATAGGACCAGCAATTTGAGC+AGG + chr7.1:61674543-61674562 None:intergenic 45.0%
ATGTTGCCTCCAGAGATTGT+GGG - chr7.1:61678827-61678846 MS.gene30001:CDS 45.0%
ATTAGTCCTTCACTTGCCAG+AGG - chr7.1:61678255-61678274 MS.gene30001:intron 45.0%
CCAACAATGGCGAACAGAAA+TGG + chr7.1:61677727-61677746 None:intergenic 45.0%
CCAATCACCCTCTTCCAATT+GGG + chr7.1:61680165-61680184 None:intergenic 45.0%
CCATTTCTGTTCGCCATTGT+TGG - chr7.1:61677724-61677743 MS.gene30001:intron 45.0%
CTCACAACACAAAGAGAGGA+TGG - chr7.1:61679521-61679540 MS.gene30001:intron 45.0%
CTTGTATGGGAAGAGGTTTG+TGG - chr7.1:61675975-61675994 MS.gene30001:intron 45.0%
CTTGTGCAAGAGCAAGAAAC+TGG - chr7.1:61675504-61675523 MS.gene30001:CDS 45.0%
GAAGAATGAAGATGGAGGGT+GGG - chr7.1:61675382-61675401 MS.gene30001:CDS 45.0%
GAAGGAAGGATCCAAAACTC+TGG + chr7.1:61675781-61675800 None:intergenic 45.0%
GACTATTCTCATCCTCGTAG+TGG + chr7.1:61676315-61676334 None:intergenic 45.0%
GCAGCATTGCAAACTAGTGA+TGG - chr7.1:61674510-61674529 MS.gene30001:intron 45.0%
GCATGCGAATTCTTGGTGAA+GGG - chr7.1:61675459-61675478 MS.gene30001:CDS 45.0%
GCTACAACGACATTGAGAAG+GGG - chr7.1:61674474-61674493 MS.gene30001:intron 45.0%
GGAGCAACACATGGATAACA+TGG + chr7.1:61677903-61677922 None:intergenic 45.0%
GGTGTGTGAATTCGTGAGTA+GGG + chr7.1:61677617-61677636 None:intergenic 45.0%
GGTTCATGGTATGGAAGTTG+GGG - chr7.1:61679395-61679414 MS.gene30001:CDS 45.0%
GTGAAAAGATGGAACCAGAG+AGG - chr7.1:61678849-61678868 MS.gene30001:CDS 45.0%
GTGGAATTGCCAATGTTGGA+GGG + chr7.1:61677695-61677714 None:intergenic 45.0%
TACCTTCATGGGGAAAAACC+TGG - chr7.1:61675555-61675574 MS.gene30001:CDS 45.0%
TACTCAGCTAAAGCCCACAA+TGG + chr7.1:61680613-61680632 None:intergenic 45.0%
TAGGGTCCCGGATTATTTGT+GGG - chr7.1:61676528-61676547 MS.gene30001:intron 45.0%
TCACCTATGTGCAAAGGTGA+AGG - chr7.1:61676080-61676099 MS.gene30001:intron 45.0%
TCACCTTTGCACATAGGTGA+CGG + chr7.1:61676080-61676099 None:intergenic 45.0%
TCCCGTGCATTCTTCTTCTT+TGG - chr7.1:61675057-61675076 MS.gene30001:intron 45.0%
TCGCAACGGAATGATCTAGT+TGG + chr7.1:61677451-61677470 None:intergenic 45.0%
TCTCTGATCAAGACCATGGA+TGG - chr7.1:61678662-61678681 MS.gene30001:CDS 45.0%
TGAAGAATGAAGATGGAGGG+TGG - chr7.1:61675381-61675400 MS.gene30001:CDS 45.0%
TGACCTTCACCTTTGCACAT+AGG + chr7.1:61676086-61676105 None:intergenic 45.0%
TGAGAAACAGTTGTGTGCAG+AGG + chr7.1:61680001-61680020 None:intergenic 45.0%
TGCATGCGAATTCTTGGTGA+AGG - chr7.1:61675458-61675477 MS.gene30001:CDS 45.0%
TGTGAATTCGTGAGTAGGGA+GGG + chr7.1:61677613-61677632 None:intergenic 45.0%
TTCTTGCAGGGTAAAAAGGG+TGG - chr7.1:61679046-61679065 MS.gene30001:intron 45.0%
TTCTTGCTAACCAGTGTCCT+CGG - chr7.1:61679810-61679829 MS.gene30001:intron 45.0%
! ACAAAGAGAGGATGGTGGTT+GGG - chr7.1:61679529-61679548 MS.gene30001:intron 45.0%
! ATGGGGAAAAACCTGGCTTT+CGG - chr7.1:61675562-61675581 MS.gene30001:CDS 45.0%
! ATGTATGCTTGCTTGTTGGG+TGG - chr7.1:61676468-61676487 MS.gene30001:intron 45.0%
! CACTAGTTTGCAATGCTGCT+AGG + chr7.1:61674509-61674528 None:intergenic 45.0%
! GGAAGGAGGAGCAATTTTGT+TGG + chr7.1:61677419-61677438 None:intergenic 45.0%
! TCCATGTGTTGCTCCAATGT+TGG - chr7.1:61677908-61677927 MS.gene30001:intron 45.0%
! TTTTCACCCACAATCTCTGG+AGG + chr7.1:61678836-61678855 None:intergenic 45.0%
!! GAGTATGAGAGTGCCAAACT+CGG - chr7.1:61676700-61676719 MS.gene30001:CDS 45.0%
!! GCAATTTTGTTGGTGAGAGG+AGG + chr7.1:61677409-61677428 None:intergenic 45.0%
!! GGAGCAATTTTGTTGGTGAG+AGG + chr7.1:61677412-61677431 None:intergenic 45.0%
!! CAAAATTAAAATTAATAAAT+AGG + chr7.1:61680512-61680531 None:intergenic 5.0%
!! TAATTATAATTATTATTTAC+TGG + chr7.1:61678439-61678458 None:intergenic 5.0%
!!! ATTAAATTTTTCTTAAAATT+CGG + chr7.1:61678391-61678410 None:intergenic 5.0%
!!! TTTTTAAAAATATAATGTTT+TGG + chr7.1:61674773-61674792 None:intergenic 5.0%
AACCATGGGGTCTGTCGAAA+AGG - chr7.1:61676342-61676361 MS.gene30001:intron 50.0%
AACCATTCTTGAGCTCGTGC+CGG + chr7.1:61679088-61679107 None:intergenic 50.0%
AACTCGGAGTCATGAGACAC+TGG - chr7.1:61676716-61676735 MS.gene30001:intron 50.0%
AACTGGATTCGTGATCACGG+TGG - chr7.1:61675521-61675540 MS.gene30001:CDS 50.0%
AACTTTCCTGGAGCGACAAC+AGG + chr7.1:61678895-61678914 None:intergenic 50.0%
ACGCATGAGAACCTATCACC+AGG + chr7.1:61677169-61677188 None:intergenic 50.0%
AGGGGATGACAAAGATGGAG+AGG + chr7.1:61677474-61677493 None:intergenic 50.0%
ATGCTTAACCATCGCCCTTG+GGG - chr7.1:61679939-61679958 MS.gene30001:intron 50.0%
ATTCTTGGTGAAGGGCCTGA+TGG - chr7.1:61675467-61675486 MS.gene30001:CDS 50.0%
ATTTCTGATGGCACCGCAGA+TGG - chr7.1:61678688-61678707 MS.gene30001:CDS 50.0%
CAAAGATGGAGAGGTCGCAA+CGG + chr7.1:61677465-61677484 None:intergenic 50.0%
CACCTTTGCACATAGGTGAC+GGG + chr7.1:61676079-61676098 None:intergenic 50.0%
CAGCACGATGAAGAGGAGTA+AGG + chr7.1:61680124-61680143 None:intergenic 50.0%
CCCAATTGGAAGAGGGTGAT+TGG - chr7.1:61680162-61680181 MS.gene30001:intron 50.0%
CGCCCACTGATGCTTGAAAT+TGG - chr7.1:61677080-61677099 MS.gene30001:intron 50.0%
CTAGGGTCCCGGATTATTTG+TGG - chr7.1:61676527-61676546 MS.gene30001:intron 50.0%
CTGAGCCACTTATCACTCGT+TGG - chr7.1:61676236-61676255 MS.gene30001:CDS 50.0%
GAATGATAACCAGTGCCCCA+AGG + chr7.1:61679957-61679976 None:intergenic 50.0%
GAGCTTCTCCTTCCATTTCC+AGG + chr7.1:61677033-61677052 None:intergenic 50.0%
GATGCTTAACCATCGCCCTT+GGG - chr7.1:61679938-61679957 MS.gene30001:intron 50.0%
GCACAGGACCTTAAAGACAG+AGG + chr7.1:61676977-61676996 None:intergenic 50.0%
GCATTGTCTTGACCTCCATC+AGG + chr7.1:61675485-61675504 None:intergenic 50.0%
GCCAACATTGGAGCAACACA+TGG + chr7.1:61677912-61677931 None:intergenic 50.0%
GCCAATCACCCTCTTCCAAT+TGG + chr7.1:61680166-61680185 None:intergenic 50.0%
GGAAGGATCCAAAACTCTGG+GGG + chr7.1:61675778-61675797 None:intergenic 50.0%
GGATCAGTTCCCTCCAACAT+TGG - chr7.1:61677683-61677702 MS.gene30001:intron 50.0%
GTAGCCAAGAATGGGATGCT+GGG - chr7.1:61678190-61678209 MS.gene30001:intron 50.0%
GTGTCTCATGACTCCGAGTT+TGG + chr7.1:61676716-61676735 None:intergenic 50.0%
GTGTGAATTCGTGAGTAGGG+AGG + chr7.1:61677614-61677633 None:intergenic 50.0%
GTTGATCGAAGAAGTGGCAC+AGG + chr7.1:61676993-61677012 None:intergenic 50.0%
TCATGTCCTCTGGCAAGTGA+AGG + chr7.1:61678264-61678283 None:intergenic 50.0%
TCTTGCTAACCAGTGTCCTC+GGG - chr7.1:61679811-61679830 MS.gene30001:intron 50.0%
TGGTATGTCATCATGGGAGC+CGG - chr7.1:61679066-61679085 MS.gene30001:intron 50.0%
TGTTGGAGGGAACTGATCCA+AGG + chr7.1:61677682-61677701 None:intergenic 50.0%
TGTTGGGTGGAAGATCCAGA+TGG - chr7.1:61676481-61676500 MS.gene30001:intron 50.0%
! AGCCAGGTTTTTCCCCATGA+AGG + chr7.1:61675560-61675579 None:intergenic 50.0%
! AGTGGGCGATGCTCCTTTTA+AGG + chr7.1:61677068-61677087 None:intergenic 50.0%
! ATCCAAAACTCTGGGGGCAT+TGG + chr7.1:61675772-61675791 None:intergenic 50.0%
! ATCCAATGCCCCCAGAGTTT+TGG - chr7.1:61675767-61675786 MS.gene30001:intron 50.0%
! CAAAGAGAGGATGGTGGTTG+GGG - chr7.1:61679530-61679549 MS.gene30001:intron 50.0%
! CACAAAGAGAGGATGGTGGT+TGG - chr7.1:61679528-61679547 MS.gene30001:intron 50.0%
! CATTGGCCTGCTCAAATTGC+TGG - chr7.1:61674534-61674553 MS.gene30001:intron 50.0%
! TACCTTTTCGACAGACCCCA+TGG + chr7.1:61676347-61676366 None:intergenic 50.0%
!! GCTCACTTGCTGCTTTCACA+GGG + chr7.1:61676932-61676951 None:intergenic 50.0%
AACTAATGCCCCGAGGACAC+TGG + chr7.1:61679823-61679842 None:intergenic 55.0%
AGCCCGTCACCTATGTGCAA+AGG - chr7.1:61676074-61676093 MS.gene30001:intron 55.0%
AGGGTGGGGTCTACACATTG+AGG - chr7.1:61675397-61675416 MS.gene30001:CDS 55.0%
CAATCTCCTGTTGTCGCTCC+AGG - chr7.1:61678886-61678905 MS.gene30001:CDS 55.0%
CACACACACACACACCTGCA+TGG + chr7.1:61676572-61676591 None:intergenic 55.0%
CAGGTTAGGGACAACCCTTC+AGG - chr7.1:61678592-61678611 MS.gene30001:CDS 55.0%
CGAACCCAGCATCCCATTCT+TGG + chr7.1:61678197-61678216 None:intergenic 55.0%
CTTGCTAACCAGTGTCCTCG+GGG - chr7.1:61679812-61679831 MS.gene30001:intron 55.0%
GGAGGGAACTGATCCAAGGT+GGG + chr7.1:61677678-61677697 None:intergenic 55.0%
GGATGCTTAACCATCGCCCT+TGG - chr7.1:61679937-61679956 MS.gene30001:intron 55.0%
GGGTGGGGTCTACACATTGA+GGG - chr7.1:61675398-61675417 MS.gene30001:CDS 55.0%
GGTAGCCAAGAATGGGATGC+TGG - chr7.1:61678189-61678208 MS.gene30001:intron 55.0%
TGGAGGGAACTGATCCAAGG+TGG + chr7.1:61677679-61677698 None:intergenic 55.0%
! CTTGGTGGTTTAGCAGCTGC+TGG - chr7.1:61679449-61679468 MS.gene30001:CDS 55.0%
! GAAGCATCTTGCTAGGGTCC+CGG - chr7.1:61676516-61676535 MS.gene30001:intron 55.0%
! GGGAGGGATAAGTGCTACTC+TGG + chr7.1:61677597-61677616 None:intergenic 55.0%
!! GGCTCACTTGCTGCTTTCAC+AGG + chr7.1:61676933-61676952 None:intergenic 55.0%
AGCCGGCACGAGCTCAAGAA+TGG - chr7.1:61679083-61679102 MS.gene30001:intron 60.0%
CTCGAGCAATCCACCCACCT+TGG - chr7.1:61677662-61677681 MS.gene30001:intron 60.0%
CTTGGTGAAGGGCCTGATGG+AGG - chr7.1:61675470-61675489 MS.gene30001:CDS 60.0%
GGGAACTGATCCAAGGTGGG+TGG + chr7.1:61677675-61677694 None:intergenic 60.0%
TGGCACCGCAGATGGTCTGA+AGG - chr7.1:61678696-61678715 MS.gene30001:CDS 60.0%
! AGAGGGTGATTGGCCCCAAC+AGG - chr7.1:61680172-61680191 MS.gene30001:intron 60.0%
!! AGGTGGGTGGATTGCTCGAG+AGG + chr7.1:61677662-61677681 None:intergenic 60.0%
AACCAGTGCCCCAAGGGCGA+TGG + chr7.1:61679950-61679969 None:intergenic 65.0%
AACCATCGCCCTTGGGGCAC+TGG - chr7.1:61679945-61679964 MS.gene30001:intron 65.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 61674217 61680687 61674217 ID=MS.gene30001
chr7.1 mRNA 61674217 61680687 61674217 ID=MS.gene30001.t1;Parent=MS.gene30001
chr7.1 exon 61680661 61680687 61680661 ID=MS.gene30001.t1.exon1;Parent=MS.gene30001.t1
chr7.1 CDS 61680661 61680687 61680661 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61680323 61680508 61680323 ID=MS.gene30001.t1.exon2;Parent=MS.gene30001.t1
chr7.1 CDS 61680323 61680508 61680323 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61679655 61679744 61679655 ID=MS.gene30001.t1.exon3;Parent=MS.gene30001.t1
chr7.1 CDS 61679655 61679744 61679655 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61679321 61679518 61679321 ID=MS.gene30001.t1.exon4;Parent=MS.gene30001.t1
chr7.1 CDS 61679321 61679518 61679321 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61679084 61679168 61679084 ID=MS.gene30001.t1.exon5;Parent=MS.gene30001.t1
chr7.1 CDS 61679084 61679168 61679084 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61678809 61678975 61678809 ID=MS.gene30001.t1.exon6;Parent=MS.gene30001.t1
chr7.1 CDS 61678809 61678975 61678809 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61678541 61678732 61678541 ID=MS.gene30001.t1.exon7;Parent=MS.gene30001.t1
chr7.1 CDS 61678541 61678732 61678541 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61676602 61676721 61676602 ID=MS.gene30001.t1.exon8;Parent=MS.gene30001.t1
chr7.1 CDS 61676602 61676721 61676602 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61676187 61676309 61676187 ID=MS.gene30001.t1.exon9;Parent=MS.gene30001.t1
chr7.1 CDS 61676187 61676309 61676187 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61675793 61675849 61675793 ID=MS.gene30001.t1.exon10;Parent=MS.gene30001.t1
chr7.1 CDS 61675793 61675849 61675793 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61675324 61675692 61675324 ID=MS.gene30001.t1.exon11;Parent=MS.gene30001.t1
chr7.1 CDS 61675324 61675692 61675324 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61675140 61675223 61675140 ID=MS.gene30001.t1.exon12;Parent=MS.gene30001.t1
chr7.1 CDS 61675140 61675223 61675140 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61674711 61674794 61674711 ID=MS.gene30001.t1.exon13;Parent=MS.gene30001.t1
chr7.1 CDS 61674711 61674794 61674711 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
chr7.1 exon 61674217 61674357 61674217 ID=MS.gene30001.t1.exon14;Parent=MS.gene30001.t1
chr7.1 CDS 61674217 61674357 61674217 ID=cds.MS.gene30001.t1;Parent=MS.gene30001.t1
Gene Sequence

>MS.gene30001

ATGCCTCCTTCCTCCAAACTTCCATTTGTAGGATCTATCATCCATCATGCATTGCACAGAAACACTAACAAATTAAGGATGGAGACAACAATATTTATTATTTTAAAAAATAGCCCCCCTTTTGTTATCAACTTCAATAACTATTATACATATTTCATTTTTGCTTCTTGGCATTGTAGGTTCTTAGAGAAAATAAATTTAAGCAAGCGATTAATGGTGTGAAGATAGAAGATGGAGAAGAGATAACATATGAGAAAGCTACAACGACATTGAGAAGGGGCGCACATCACCTAGCAGCATTGCAAACTAGTGATGGTCATTGGCCTGCTCAAATTGCTGGTCCTATGTTTTTCACTCCTCCTTTGGTGAATACTTATCTTTGTTTTTAATAAGCTAAGAGTAGGCCTAACCCATGAAAAAGAAAAAAAAAAAGACAAAAGAAACAATAAAGAGTATTACAGGGGATAGTAGGTTAATTGTTTTTAGCTAAGGGATAAAGGAGCTAAATTATTTGACCGTTAGAAAAAGAAAATACTAATCTAACAACTAATTACCAAAACATTATATTTTTAAAAAATAAAATAAAGAGTATGAAAAAAATACTCTCTCCGGTCTCAAGTATATATAAGGTACGTATGTTATTATCATGTATTTTTTATATCATAATGGCACGCACGCACGCACACATAGAATAACACAAGGGAGTGATAGTTTATGTCCTTACTTGCATTACAAGTAACATGCTAAGTAAGGATTAATTACACAATTAACAGTAATATTCCTAGCAGTCCTCTCTTAAACTAAACACTACAATAGAAAAATAAATTTACAACTTGGTTGTCCCGTGCATTCTTCTTCTTTGGTAACTTGGAAGTGTCAACGGTGAACCACTTGTTACTTACTTTTGACTATTTGATCAAGCTGGATGAAACACAAATTTCAGGTTTTTTGTGTTTACATTACGGGACATCTTGATTTGGTATTCCCACAAGAGTATCGCAAAGAGATTCTTCGTTACATATATTGTCATCAGGTACATATACAGTTACTTTATGATCCAATTTCAGCATACAAATTCACCCATTTGTTATGCAAATATATATGCTTGTTTTCCTTGATTAGCCATGAAATTTGAGATAAAGTTCTTCATGTGGTGGTTTCTTTTGAAGAATGAAGATGGAGGGTGGGGTCTACACATTGAGGGTAACAGCACCATGTTTTGTACTGCACTTAACTATATATGCATGCGAATTCTTGGTGAAGGGCCTGATGGAGGTCAAGACAATGCTTGTGCAAGAGCAAGAAACTGGATTCGTGATCACGGTGGTGTAACACATATACCTTCATGGGGAAAAACCTGGCTTTCGGTACAATTTTTTACATTTAGGGTTTAGGTTTTTATCAGATATAAAATTGTTATGAAACATGAAATCCACGAAGAAACGAGAGAAAATATTCAACTTTGTATCCACTAACTATTTACTACTATATATCCTTCAAATGTTTTCTTTATCTGTAGATACTTGGTGTATTTGATTGGTCTGGATGCAATCCAATGCCCCCAGAGTTTTGGATCCTTCCTTCATTTCTTCCAATGCATCCAGGTTCAATTAGTTGATTATGTTTTGTTAATTTATATTATGTGTGTGTGAAATGAACAAACATTGACTTGATAGTTTATTCTATCTCATTTTCACATTAATTAATTGTAGGTAAAATGTGGTGTTATTGTCGATTGACATACATGTCTATGTCTTACTTGTATGGGAAGAGGTTTGTGGGTCGAATAACTCCACTCATATTACAGTTGAGAGAAGAACTTCATACTGAATCTTATGAAAAAGTTAATTGGTCGAAAGCCCGTCACCTATGTGCAAAGGTGAAGGTCATAGTTGTCTTTAAATGATAACATACATAGGAGGGGTAAATGATCCATTTTATGCCGTATTATACAGGAAGATCTTTATTATCCCCGTCCTTTGATACAAAATCTGATTTGGGATAGCTTATACATATTCACTGAGCCACTTATCACTCGTTGGCCTTTCAACAAATTGGTAAGAGAAAAAGCCCTTCAAGTAACAATGAAGCATATCCACTACGAGGATGAGAATAGTCGATACATAACCATGGGGTCTGTCGAAAAGGTAAGCATCGTCATAGCAATTAAACATATTGATTATTTAGCTTTTCATAAAATAAAATAATTTCAAATATTCCATTATTAACATGTATATAGTTATCAGGCTTTATGTATGCTTGCTTGTTGGGTGGAAGATCCAGATGGAGATGCTTTCAAGAAGCATCTTGCTAGGGTCCCGGATTATTTGTGGGTTTCAGAAGATGGAATGACCATGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCGTGAGTGTGTGTGTGTGTGTGTGTGTTAAAGTTTAGAATATTTAAGATTAGAATAGGAAGAAAAAAGTAACAGATTTTGGAGTATGAGAGTGCCAAACTCGGAGTCATGAGACACTGGACGAACTCTAGAAGTTGCAACTTAAACGCCACAAAACAACTAGTTTTAGCACCAAAAAGGTACGTAAAAATCTTGCAACCAATTTAGCATGATCTTTTTGACACAAAATACCCTATTTATGCAACCTGATGTATCCCTTACTTAAATTGTGAAGGGTGTCCTATGTCTATTCACAAATTTCTTCATCTGTCCCTGTGAAAGCAGCAAGTGAGCCTTTAGTTGTTTCAAAGCTTCGCCTCTGTCTTTAAGGTCCTGTGCCACTTCTTCGATCAACACTTCACTTAGTATAAACCTGGAAATGGAAGGAGAAGCTCTCATATATAATACCTTAAAAGGAGCATCGCCCACTGATGCTTGAAATTGGTATTATATATGTATTTTTCCAAGTGAATGAAATCTCTATACACCTTTGTTTGACCATCAAACTCCTGGTGATAGGTTCTCATGCGTAGTTATGTTCCTTGCAACATGAATAGTTCTTGCCAAAAATTACACATGAAAATAAGATCTATATTATGATGGAGACCGGATCCCAGTGAACTTCATTAACTTCGAAGCAAATATCTCATCTAAAGATCTTGTTGAATATGGGTGTTTAAAGGGTACAAAATGTTCATATTTACTCGATCTATCCACAATCGTCCATATGCTAAAAAGAAAGAAGATTCCTCCTCTCACCAACAAAATTGCTCCTCCTTCCAACAAAATTCCAACTAGATCATTCCGTTGCGACCTCTCCATCTTTGTCATCCCCTAAAATAAAAATTATGAGATTCCAATCAAAAAGATTATTTTGGATAAAGCCGAGGACTTAACCAAAACTGCAATAATATTCCTTTGTCACCAAAATGAGAACCAGAGTAGCACTTATCCCTCCCTACTCACGAATTCACACACCTGTTTAATTTTGAAGTATTTCTCCTCTCGAGCAATCCACCCACCTTGGATCAGTTCCCTCCAACATTGGCAATTCCACTTTCTTGAACCATTTCTGTTCGCCATTGTTGGTATGTAATTGATGGCTGATCCTGATTTTTCTGGTGAATCCTTCTTTTCCCAACCAATACCTTTCTCCTTCATGAAGGTCTTGAGTAATGTGTTTATTTCTTCAGTGTTTTCGACTTTCAATAGCTGTTTGCTTCAAGAACTCGACTGCAATGTCCATGTTATCCATGTGTTGCTCCAATGTTGGCATGTTTAGACAAAATTGGCAGAGCTTAGAATATTCAAGATTAGAATAGGAAGAAAGACAAATTTTGGGATATGTGAGTAATAGATTCTGTTATTGCTTCACAAAGGGACTCTCCTTTTTACAATCTGACTTAATATTTATATTCTCCTAGATTATACATGTAATATAGGATTAATTATTATTACTATTGTAACTAATGTGATACATTCAATAAATAAATTTTTTTTTTCAATCGCAATACATACAATGTAGAGTTTTGGTAGCCAAGAATGGGATGCTGGGTTCGCTGTTCAAGCTTTGCTTGCCACAAACTTAATTGAAGAAATTAGTCCTTCACTTGCCAGAGGACATGATTTCATTAAGAAATCTCAGGTATACATGCTTAATATTGATGACATAATGACCGTTCTCCTTCCTTTAATTTACGAAAATTAAACTCCCAATGAATCATGTTTATCCGAATTTTAAGAAAAATTTAATGATTACTAAATAGCTAATTACCAAGCCAGTAAATAATAATTATAATTAGTACTAATATTATATTGTTCTAGTTATAGCACATTTGATTTACTATTATCTACTTAGTTAGTGTTCATCATCAGGCCTTTGAACAATATGTGTGCTAATTTTAAAATCCAATGAAATTGATACTTTTATTTCACAGGTTAGGGACAACCCTTCAGGAGATTTTAAGAGTATGCATCGTCATATTTCTAAAGGCTCGTGGACTTTCTCTGATCAAGACCATGGATGGCAAATTTCTGATGGCACCGCAGATGGTCTGAAGGTAAATAACAATATACGCTAGATATGCACAACTTAATTTGTTAAAAACATGCTTTTAAATCACCACAAATATAAACTCTTTGGTGTTTCAGTGTTGTCTACTTTTATCAATGTTGCCTCCAGAGATTGTGGGTGAAAAGATGGAACCAGAGAGGTTATATGATTCAGTCAATCTCCTGTTGTCGCTCCAGGAAAGTTCTACTATTCAATTTTTAGCCCTATATTTTTCATTGATATATTGACTACTTATTGATCTTTCAATATGTTACTTCATCAACGAAAATGCGTGAATCGTGCAAATGAGTTTGACCATTTACCTTTTTCTTTCATTCTTGCAGGGTAAAAAGGGTGGTATGTCATCATGGGAGCCGGCACGAGCTCAAGAATGGTTAGAAGTAAGGATTGTACTAATAAATATAGTCTTGTGTAGTCTCATTAAACACACAAAACACTCAAATTTAATATAAACTAATCAACTTTGTTATTTATTTGCAGGTACTGAATCCCACCGAATTTTTCGCAGAAATTGTAATTGAATATGAGTATGTTGAGTGCACTGGACCAGCAATTCAAGCTTTAGTTATGTTCAATAAGCTATATCCAGAGCATAGGAAGAAAGAGATAGAGATTTTCATTAACAATGCAGTTAGATTCCTTGAAGATACACAAAAAGATGATGGTTCATGGTATGGAAGTTGGGGAATTTGCTTCATTTATGGTACTTATTTTGCTCTTGGTGGTTTAGCAGCTGCTGGAAAGACTTATACCAATTCTGTTGCGATTCGTAAAGCTGTTCAATTTCTTCTCACAACACAAAGAGAGGATGGTGGTTGGGGAGAGAGCTATCTTTCATGCCCAAAAAAGGTTCATATTGAGTTATTATTAGTATTACTAATCATTCTTCAACTTCAACTAGAGTAGAAAATTGTGATTATGTCTTACTAAATTACTAACAATAATGCAGAAATATATACCACTTGAAGAAAGCCAACAATCAAATGTTGTACAAACTGCATGGGGTCTCATGAGTTTAATTTATGCTGGCCAGGTATGCTCTTCATGATTTAAAGGTCAAAATATTTTTTTTTTTAGGTTCTTGCTAACCAGTGTCCTCGGGGCATTAGTTAAAGAATCTACAAATAAAAATGTTGTCTTGTAAATATAAGATGTTACTTTAAACATGTAATAATTACACAATTTTTTCATCAAAATTTACTTTTGGATGCTTAACCATCGCCCTTGGGGCACTGGTTATCATTCTCATTTTTTTTAACCAAATATCCTCTGCACACAACTGTTTCTCACTCAAATTAGGAAGACCACAACTATTACCATAAATGCAAATGAATCTTAACATTGGTGTTTTTCTCTTCTTTCTAATTCTTGTATATAGGCAGAGAGAGACCTTACTCCTCTTCATCGTGCTGCAAAATTTCTCATCAATTCCCAATTGGAAGAGGGTGATTGGCCCCAACAGGTTCATGTTAATTAATACTTACATATTAAATAAGGAGGCTCCTATTTATGCTTAGCTCACAATACCGAAATTGATATATAGGAAGGAATGAATTGTGTCTTGAAAAACAAGCCAGTAGCATTGTATAATCAAATAAAAAAACAAAACATTGTGGGTAGGTGATATCTTTAGCCACTTGTGTAGTGATTAATTTACCATCTTAACTTTGTCAAGACACTCTAATGGGGACCAAGAAAAATATAATTAAAATGCATGCATGCATGCACTTACCATGAAATCAAAACTCAATTTTTTTTTTTTTTGACAAAAAAAATACCTATTTATTAATTTTAATTTTGTCTTATTTATTGTAGGGAATCACAGGAGTAATCTTCAAAAATTGTATGTTGCATTACACAATGTATAGAGATATTTTCCCATTGTGGGCTTTAGCTGAGTATCGTAGATATGTTCCATTGTCTTCCACTGGAGTTAAACTTGAAAAAAAGATTTGA
Protein sequence

>MS.gene30001.t1

MPPSSKLPFVLRENKFKQAINGVKIEDGEEITYEKATTTLRRGAHHLAALQTSDGHWPAQIAGPMFFTPPLVFCVYITGHLDLVFPQEYRKEILRYIYCHQNEDGGWGLHIEGNSTMFCTALNYICMRILGEGPDGGQDNACARARNWIRDHGGVTHIPSWGKTWLSILGVFDWSGCNPMPPEFWILPSFLPMHPGKMWCYCRLTYMSMSYLYGKRFVGRITPLILQLREELHTESYEKVNWSKARHLCAKEDLYYPRPLIQNLIWDSLYIFTEPLITRWPFNKLVREKALQVTMKHIHYEDENSRYITMGSVEKSFGSQEWDAGFAVQALLATNLIEEISPSLARGHDFIKKSQVRDNPSGDFKSMHRHISKGSWTFSDQDHGWQISDGTADGLKGKKGGMSSWEPARAQEWLEVLNPTEFFAEIVIEYEYVECTGPAIQALVMFNKLYPEHRKKEIEIFINNAVRFLEDTQKDDGSWYGSWGICFIYGTYFALGGLAAAGKTYTNSVAIRKAVQFLLTTQREDGGWGESYLSCPKKKYIPLEESQQSNVVQTAWGLMSLIYAGQAERDLTPLHRAAKFLINSQLEEGDWPQQGITGVIFKNCMLHYTMYRDIFPLWALAEYRRYVPLSSTGVKLEKKI