Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30747.t1 | XP_003601141.2 | 98.6 | 577 | 6 | 1 | 1 | 575 | 1 | 577 | 0.00E+00 | 1164.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30747.t1 | Q84WV0 | 74.3 | 501 | 117 | 3 | 83 | 571 | 91 | 591 | 3.2e-221 | 769.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30747.t1 | G7J467 | 98.6 | 577 | 6 | 1 | 1 | 575 | 1 | 577 | 0.0e+00 | 1164.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052641 | MS.gene30747 | 0.970263 | 2.37E-131 | -1.69E-46 |
| MS.gene055505 | MS.gene30747 | 0.831897 | 1.29E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30747.t1 | MTR_3g073470 | 98.614 | 577 | 6 | 1 | 1 | 575 | 1 | 577 | 0.0 | 1189 |
| MS.gene30747.t1 | MTR_2g006570 | 68.070 | 570 | 153 | 7 | 28 | 574 | 29 | 592 | 0.0 | 794 |
| MS.gene30747.t1 | MTR_2g006570 | 77.435 | 421 | 92 | 1 | 157 | 574 | 1 | 421 | 0.0 | 700 |
| MS.gene30747.t1 | MTR_3g084310 | 64.208 | 461 | 157 | 2 | 116 | 573 | 7 | 462 | 0.0 | 632 |
| MS.gene30747.t1 | MTR_8g081510 | 63.774 | 461 | 159 | 2 | 116 | 573 | 7 | 462 | 0.0 | 627 |
| MS.gene30747.t1 | MTR_3g084310 | 66.209 | 364 | 118 | 1 | 116 | 479 | 7 | 365 | 0.0 | 521 |
| MS.gene30747.t1 | MTR_5g030950 | 53.079 | 471 | 203 | 6 | 114 | 573 | 46 | 509 | 2.96e-169 | 491 |
| MS.gene30747.t1 | MTR_5g067060 | 52.371 | 464 | 206 | 5 | 118 | 573 | 42 | 498 | 5.50e-169 | 489 |
| MS.gene30747.t1 | MTR_2g018290 | 50.000 | 464 | 202 | 6 | 121 | 572 | 87 | 532 | 5.44e-158 | 462 |
| MS.gene30747.t1 | MTR_7g108420 | 42.438 | 443 | 206 | 9 | 146 | 573 | 1 | 409 | 2.87e-103 | 318 |
| MS.gene30747.t1 | MTR_7g012360 | 90.476 | 63 | 6 | 0 | 15 | 77 | 1 | 63 | 1.37e-32 | 119 |
| MS.gene30747.t1 | MTR_2g438370 | 82.609 | 69 | 10 | 1 | 53 | 119 | 2 | 70 | 1.30e-31 | 118 |
| MS.gene30747.t1 | MTR_2g438370 | 85.000 | 40 | 6 | 0 | 236 | 275 | 65 | 104 | 3.18e-15 | 72.0 |
| MS.gene30747.t1 | MTR_7g017460 | 88.710 | 62 | 7 | 0 | 15 | 76 | 1 | 62 | 2.15e-30 | 115 |
| MS.gene30747.t1 | MTR_7g090490 | 90.164 | 61 | 6 | 0 | 15 | 75 | 1 | 61 | 5.24e-26 | 101 |
| MS.gene30747.t1 | MTR_1g073580 | 43.182 | 88 | 45 | 2 | 266 | 353 | 1 | 83 | 4.90e-17 | 81.3 |
| MS.gene30747.t1 | MTR_3g062030 | 44.156 | 77 | 39 | 1 | 388 | 464 | 13 | 85 | 1.62e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30747.t1 | AT1G22020 | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| MS.gene30747.t1 | AT1G22020 | 65.882 | 595 | 179 | 8 | 3 | 574 | 5 | 598 | 0.0 | 780 |
| MS.gene30747.t1 | AT1G36370 | 65.763 | 590 | 179 | 7 | 3 | 572 | 6 | 592 | 0.0 | 768 |
| MS.gene30747.t1 | AT4G13930 | 63.636 | 462 | 160 | 2 | 115 | 573 | 6 | 462 | 0.0 | 620 |
| MS.gene30747.t1 | AT4G13890 | 62.338 | 462 | 166 | 2 | 115 | 573 | 6 | 462 | 0.0 | 605 |
| MS.gene30747.t1 | AT4G13890 | 63.683 | 391 | 134 | 2 | 115 | 502 | 6 | 391 | 0.0 | 528 |
| MS.gene30747.t1 | AT4G37930 | 52.708 | 480 | 206 | 7 | 108 | 573 | 36 | 508 | 5.83e-173 | 500 |
| MS.gene30747.t1 | AT4G32520 | 51.116 | 493 | 217 | 5 | 89 | 572 | 51 | 528 | 3.03e-171 | 496 |
| MS.gene30747.t1 | AT4G32520 | 51.116 | 493 | 217 | 5 | 89 | 572 | 51 | 528 | 3.03e-171 | 496 |
| MS.gene30747.t1 | AT5G26780 | 52.802 | 464 | 204 | 5 | 118 | 573 | 52 | 508 | 6.16e-168 | 487 |
| MS.gene30747.t1 | AT5G26780 | 52.802 | 464 | 204 | 5 | 118 | 573 | 52 | 508 | 6.16e-168 | 487 |
| MS.gene30747.t1 | AT5G26780 | 51.042 | 480 | 204 | 6 | 118 | 573 | 52 | 524 | 1.35e-163 | 477 |
| MS.gene30747.t1 | AT5G26780 | 51.042 | 480 | 204 | 6 | 118 | 573 | 52 | 524 | 1.35e-163 | 477 |
Find 128 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAATAAGTGTGCCATTTA+TGG | 0.063511 | 3.1:+60187326 | MS.gene30747:CDS |
| TTGATCTTGATTCAAGTAAT+TGG | 0.153213 | 3.1:+60184128 | MS.gene30747:CDS |
| GAATCCTGGTGATAGGATTA+TGG | 0.192344 | 3.1:+60184213 | MS.gene30747:CDS |
| ATAACTGCACTCGGTTTAAT+TGG | 0.195295 | 3.1:+60186122 | MS.gene30747:CDS |
| TCCTGAAATATTTACTATTA+TGG | 0.200046 | 3.1:+60183907 | MS.gene30747:CDS |
| AAGCCTTGCTTCCTTGGTTT+TGG | 0.211435 | 3.1:-60185837 | None:intergenic |
| TCCATAATAGTAAATATTTC+AGG | 0.234594 | 3.1:-60183908 | None:intergenic |
| CATTTATGGTTCTATTTCTT+CGG | 0.243918 | 3.1:+60187340 | MS.gene30747:CDS |
| GAAAAGTTGAGACAGTTTAA+AGG | 0.290864 | 3.1:+60183935 | MS.gene30747:CDS |
| AATGGGATTATGCGAGGTTT+AGG | 0.290968 | 3.1:+60184443 | MS.gene30747:CDS |
| AACCAAACCCTTCTCTTTCA+TGG | 0.293598 | 3.1:+60183645 | MS.gene30747:CDS |
| TGATCTTGATTCAAGTAATT+GGG | 0.295376 | 3.1:+60184129 | MS.gene30747:CDS |
| CGAAGAAATAGAACCATAAA+TGG | 0.297155 | 3.1:-60187339 | None:intergenic |
| GTCAAAGGATTAACCTTATA+AGG | 0.310916 | 3.1:-60184331 | None:intergenic |
| GGATTCTAAGGCTGTGAGTT+GGG | 0.334631 | 3.1:+60183859 | MS.gene30747:CDS |
| AGAACAAAGCCTTGCTTCCT+TGG | 0.338559 | 3.1:-60185843 | None:intergenic |
| TGAATCCTGGCATTTCAAAC+TGG | 0.339413 | 3.1:-60188236 | None:intergenic |
| AATCCTGGTGATAGGATTAT+GGG | 0.339991 | 3.1:+60184214 | MS.gene30747:CDS |
| TTAGCTGAAGTACATGAATA+AGG | 0.342939 | 3.1:-60184166 | None:intergenic |
| ATGGGTTTGGATTCGGCGTC+TGG | 0.347974 | 3.1:+60184232 | MS.gene30747:CDS |
| CAAGGCTTTGTTCTTAATCA+TGG | 0.348449 | 3.1:+60185852 | MS.gene30747:CDS |
| AATCTCCTCTTGAAACAAAT+AGG | 0.351775 | 3.1:-60183788 | None:intergenic |
| TGGTGATAGGATTATGGGTT+TGG | 0.361837 | 3.1:+60184219 | MS.gene30747:CDS |
| GCGTGTCGCGGTGGATTCTA+AGG | 0.372212 | 3.1:+60183847 | MS.gene30747:CDS |
| AGGAGAAAGCTGTGGATTAT+AGG | 0.379628 | 3.1:+60184380 | MS.gene30747:CDS |
| AGGTGAAACAATTGATTTCA+TGG | 0.382095 | 3.1:+60183760 | MS.gene30747:CDS |
| CAGCCTCTTGATGTCATTGC+AGG | 0.383831 | 3.1:-60188048 | None:intergenic |
| TAGGATTATGGGTTTGGATT+CGG | 0.386569 | 3.1:+60184225 | MS.gene30747:CDS |
| TCTCCAACAAATTCATCAAA+TGG | 0.392870 | 3.1:+60183581 | MS.gene30747:CDS |
| AGAAATCGGGTTGAGACATT+TGG | 0.395148 | 3.1:+60188210 | MS.gene30747:CDS |
| TTGTTTCAAGAGGAGATTAG+AGG | 0.398105 | 3.1:+60183793 | MS.gene30747:CDS |
| GACCCATTTGATGAATTTGT+TGG | 0.403227 | 3.1:-60183584 | None:intergenic |
| CTGATCAATATACTGATTAC+CGG | 0.415617 | 3.1:-60184068 | None:intergenic |
| CGCCATGAAAGAGAAGGGTT+TGG | 0.419762 | 3.1:-60183647 | None:intergenic |
| ATTTATGGTTCTATTTCTTC+GGG | 0.424350 | 3.1:+60187341 | MS.gene30747:CDS |
| CGCAACTTGTTTCAAAGCTA+TGG | 0.434158 | 3.1:-60185973 | None:intergenic |
| TTAACATGAACATTGTTGTC+TGG | 0.437073 | 3.1:-60183686 | None:intergenic |
| GGCTCCCAGTTTGAAATGCC+AGG | 0.438034 | 3.1:+60188231 | MS.gene30747:CDS |
| TGCACAAGCGGGTTTATCAC+TGG | 0.443318 | 3.1:+60183538 | MS.gene30747:CDS |
| CAGTGGTCTTGTTGCGGCTA+AGG | 0.444969 | 3.1:+60184516 | MS.gene30747:CDS |
| TCATGGTGGGAAGAAGGTTT+CGG | 0.463885 | 3.1:+60184282 | MS.gene30747:CDS |
| CTCTGGGATATAACTGCACT+CGG | 0.464654 | 3.1:+60186113 | MS.gene30747:CDS |
| TATAAGGTTAATCCTTTGAC+TGG | 0.469652 | 3.1:+60184334 | MS.gene30747:CDS |
| GACATCAAGAGGCTGTTTAG+AGG | 0.471361 | 3.1:+60188056 | MS.gene30747:CDS |
| GTTGAAAAGAAAATGCAGAT+TGG | 0.472081 | 3.1:+60186061 | MS.gene30747:CDS |
| CTCCAACAAATTCATCAAAT+GGG | 0.472113 | 3.1:+60183582 | MS.gene30747:CDS |
| GTAGTTCTTATCCTAGAGAA+TGG | 0.476473 | 3.1:+60184425 | MS.gene30747:CDS |
| ACAATATCACAGTAATCAAA+TGG | 0.479034 | 3.1:-60185750 | None:intergenic |
| CCACCACAAATAAGTATCTT+CGG | 0.482409 | 3.1:-60184403 | None:intergenic |
| AAGTATTCAGAGGGAATGCC+GGG | 0.484305 | 3.1:+60184031 | MS.gene30747:CDS |
| TTATACTCATGGTGGGAAGA+AGG | 0.485816 | 3.1:+60184276 | MS.gene30747:CDS |
| AGTCATGGTTATTATACTCA+TGG | 0.486337 | 3.1:+60184265 | MS.gene30747:CDS |
| TGGATTCTAAGGCTGTGAGT+TGG | 0.488319 | 3.1:+60183858 | MS.gene30747:CDS |
| TTTGATGAATTTGTTGGAGA+TGG | 0.492254 | 3.1:-60183578 | None:intergenic |
| TGGTTATATTGATTATGATA+AGG | 0.493587 | 3.1:+60184354 | MS.gene30747:CDS |
| GCTTTATACCCATCGTTACA+AGG | 0.494852 | 3.1:+60185918 | MS.gene30747:CDS |
| GAATCCTGGCATTTCAAACT+GGG | 0.497835 | 3.1:-60188235 | None:intergenic |
| TCCACCGCGACACGCTTCGC+CGG | 0.497839 | 3.1:-60183839 | None:intergenic |
| TAAAATCAATAATTGAATCC+TGG | 0.499060 | 3.1:-60188249 | None:intergenic |
| TAAAAGACAATACCTCCTCT+TGG | 0.502018 | 3.1:-60185804 | None:intergenic |
| TAAGTATTCAGAGGGAATGC+CGG | 0.502612 | 3.1:+60184030 | MS.gene30747:CDS |
| GCACAAGCGGGTTTATCACT+GGG | 0.502741 | 3.1:+60183539 | MS.gene30747:CDS |
| GATTCTAAGGCTGTGAGTTG+GGG | 0.507340 | 3.1:+60183860 | MS.gene30747:CDS |
| TAGTTCTTATCCTAGAGAAT+GGG | 0.510663 | 3.1:+60184426 | MS.gene30747:CDS |
| AATATTTACTATTATGGAGA+AGG | 0.513135 | 3.1:+60183913 | MS.gene30747:CDS |
| CCGGTATAATATTTCGCTCC+CGG | 0.514845 | 3.1:-60184049 | None:intergenic |
| TATTGATTATGATAAGGTTG+AGG | 0.517586 | 3.1:+60184360 | MS.gene30747:CDS |
| AGGCCGAAGATACTTATTTG+TGG | 0.519395 | 3.1:+60184400 | MS.gene30747:CDS |
| ACAACCCACAAAAGTCTTCG+AGG | 0.522891 | 3.1:+60185780 | MS.gene30747:CDS |
| AGCAGCAATGTGATTGTTGT+GGG | 0.529037 | 3.1:-60185946 | None:intergenic |
| GGTGAAACAATTGATTTCAT+GGG | 0.530175 | 3.1:+60183761 | MS.gene30747:CDS |
| GATCTTGATTCAAGTAATTG+GGG | 0.535029 | 3.1:+60184130 | MS.gene30747:CDS |
| ATGTTCCCTCTGTATAATGC+TGG | 0.535614 | 3.1:-60188127 | None:intergenic |
| TAAACCCGCTTGTGCATCCA+TGG | 0.538895 | 3.1:-60183531 | None:intergenic |
| TCTTCGGGAGGAGTGAGAAT+CGG | 0.543265 | 3.1:+60187356 | MS.gene30747:CDS |
| TGATCCATGGATGCACAAGC+GGG | 0.546671 | 3.1:+60183527 | None:intergenic |
| GGTTTGGATTCGGCGTCTGG+TGG | 0.551813 | 3.1:+60184235 | MS.gene30747:CDS |
| TCTGGTGGACATTTGAGTCA+TGG | 0.554954 | 3.1:+60184250 | MS.gene30747:CDS |
| TCAGGATCAGCAACACTCAA+AGG | 0.560325 | 3.1:-60183890 | None:intergenic |
| AGGAAGATTGCTGATAAATG+TGG | 0.562025 | 3.1:+60184463 | MS.gene30747:CDS |
| CTCGCATAATCCCATTCTCT+AGG | 0.565281 | 3.1:-60184436 | None:intergenic |
| GTATAAAGCATACATGCAGC+AGG | 0.570150 | 3.1:+60186004 | MS.gene30747:CDS |
| TGGGGACCTCCTTGTAACGA+TGG | 0.574338 | 3.1:-60185927 | None:intergenic |
| TTGACTAATAAGTATTCAGA+GGG | 0.575405 | 3.1:+60184022 | MS.gene30747:CDS |
| TCATATCAGTGGTCTTGTTG+CGG | 0.575798 | 3.1:+60184510 | MS.gene30747:CDS |
| TGCATGTATGCTTTATACTC+TGG | 0.576245 | 3.1:-60185999 | None:intergenic |
| GGGCCAAAACCAAGGAAGCA+AGG | 0.577703 | 3.1:+60185834 | MS.gene30747:CDS |
| TTGATCCATGGATGCACAAG+CGG | 0.585997 | 3.1:+60183526 | None:intergenic |
| ACCGAAAAGGGCCAAAACCA+AGG | 0.591701 | 3.1:+60185826 | MS.gene30747:CDS |
| GGGGACCTCCTTGTAACGAT+GGG | 0.593245 | 3.1:-60185926 | None:intergenic |
| TATGGTTCTATTTCTTCGGG+AGG | 0.595129 | 3.1:+60187344 | MS.gene30747:CDS |
| TTTGACTAATAAGTATTCAG+AGG | 0.596390 | 3.1:+60184021 | MS.gene30747:CDS |
| AAATGCAGATTGGTTACTGA+TGG | 0.597826 | 3.1:+60186071 | MS.gene30747:CDS |
| GAGCAGCAATGTGATTGTTG+TGG | 0.598188 | 3.1:-60185947 | None:intergenic |
| TCCGGCGAAGCGTGTCGCGG+TGG | 0.601046 | 3.1:+60183838 | MS.gene30747:CDS |
| ACTCCTGCAATGACATCAAG+AGG | 0.601746 | 3.1:+60188045 | MS.gene30747:CDS |
| AGTAAACGCCATGAAAGAGA+AGG | 0.604955 | 3.1:-60183653 | None:intergenic |
| AAACAATTGATTTCATGGGT+AGG | 0.605913 | 3.1:+60183765 | MS.gene30747:CDS |
| CATGGTTATTATACTCATGG+TGG | 0.607119 | 3.1:+60184268 | MS.gene30747:CDS |
| GATGCTGATGGTGAAGAAGA+AGG | 0.609256 | 3.1:+60183740 | MS.gene30747:CDS |
| TGTTCCGGCGAAGCGTGTCG+CGG | 0.611098 | 3.1:+60183835 | MS.gene30747:CDS |
| GTAGGCCTATTTGTTTCAAG+AGG | 0.611633 | 3.1:+60183783 | MS.gene30747:CDS |
| ATGGTTATTATACTCATGGT+GGG | 0.612324 | 3.1:+60184269 | MS.gene30747:CDS |
| TACAGACAGAAACTATGAGA+AGG | 0.612965 | 3.1:+60187280 | MS.gene30747:intron |
| CCGAAGATACTTATTTGTGG+TGG | 0.613875 | 3.1:+60184403 | MS.gene30747:CDS |
| CCGGGAGCGAAATATTATAC+CGG | 0.613923 | 3.1:+60184049 | MS.gene30747:CDS |
| AGCATTATACAGAGGGAACA+TGG | 0.613990 | 3.1:+60188129 | MS.gene30747:CDS |
| TAATCAATATAACCAGTCAA+AGG | 0.615001 | 3.1:-60184346 | None:intergenic |
| CTAGAGAATGGGATTATGCG+AGG | 0.616599 | 3.1:+60184437 | MS.gene30747:CDS |
| CCTCAGAAGAAAATCTGCCA+TGG | 0.616792 | 3.1:-60188091 | None:intergenic |
| GATGAAGTTGTTGATGCTGA+TGG | 0.617950 | 3.1:+60183728 | MS.gene30747:CDS |
| GATTACCAGCATTATACAGA+GGG | 0.630319 | 3.1:+60188122 | MS.gene30747:CDS |
| TAAGGTTGAGGAGAAAGCTG+TGG | 0.630384 | 3.1:+60184372 | MS.gene30747:CDS |
| TGAATTTGTTGGAGATGGCA+TGG | 0.631230 | 3.1:-60183573 | None:intergenic |
| GTAAACGCCATGAAAGAGAA+GGG | 0.634712 | 3.1:-60183652 | None:intergenic |
| ATGTCTCAACCCGATTTCTG+AGG | 0.637365 | 3.1:-60188206 | None:intergenic |
| ATTCTAAGGCTGTGAGTTGG+GGG | 0.647751 | 3.1:+60183861 | MS.gene30747:CDS |
| TGGTGGGAAGAAGGTTTCGG+CGG | 0.648151 | 3.1:+60184285 | MS.gene30747:CDS |
| AAACCCATAATCCTATCACC+AGG | 0.648442 | 3.1:-60184217 | None:intergenic |
| AGTCTTCGAGGTCCAAGAGG+AGG | 0.652611 | 3.1:+60185792 | MS.gene30747:CDS |
| AAACTATGAGAAGGTTTGTG+AGG | 0.660257 | 3.1:+60187289 | MS.gene30747:CDS |
| AAAAGTCTTCGAGGTCCAAG+AGG | 0.670998 | 3.1:+60185789 | MS.gene30747:CDS |
| TGTGACATGGCTCATATCAG+TGG | 0.681496 | 3.1:+60184499 | MS.gene30747:CDS |
| CACAAGCGGGTTTATCACTG+GGG | 0.683010 | 3.1:+60183540 | MS.gene30747:CDS |
| AGGGCTGTGATGGAAGCACT+TGG | 0.691729 | 3.1:+60183992 | MS.gene30747:CDS |
| AGATTACCAGCATTATACAG+AGG | 0.693899 | 3.1:+60188121 | MS.gene30747:CDS |
| GCAGCAATGTGATTGTTGTG+GGG | 0.748236 | 3.1:-60185945 | None:intergenic |
| TTATACCCATCGTTACAAGG+AGG | 0.763503 | 3.1:+60185921 | MS.gene30747:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAATAATAACTTGTAATA+TGG | - | chr3.1:60186228-60186247 | None:intergenic | 10.0% |
| !!! | AAAATTCCAAAAATAATTTT+AGG | - | chr3.1:60186918-60186937 | None:intergenic | 10.0% |
| !!! | AATAATAAAAACAACTATTT+TGG | + | chr3.1:60185249-60185268 | MS.gene30747:intron | 10.0% |
| !! | AAATACTAAACTAAATAGTA+TGG | - | chr3.1:60187495-60187514 | None:intergenic | 15.0% |
| !! | AAATGTTATCATAAAGTAAA+CGG | + | chr3.1:60185377-60185396 | MS.gene30747:intron | 15.0% |
| !! | ATAAACATAATAAGATGATA+GGG | - | chr3.1:60187261-60187280 | None:intergenic | 15.0% |
| !! | ATACATCTATTAAAAAAATG+GGG | - | chr3.1:60186981-60187000 | None:intergenic | 15.0% |
| !! | ATGTTTAAACAAATTACTAT+CGG | + | chr3.1:60187959-60187978 | MS.gene30747:intron | 15.0% |
| !! | CATACATCTATTAAAAAAAT+GGG | - | chr3.1:60186982-60187001 | None:intergenic | 15.0% |
| !! | TATAAACATAATAAGATGAT+AGG | - | chr3.1:60187262-60187281 | None:intergenic | 15.0% |
| !!! | ACATTTTAGAAAATGAAAAA+AGG | - | chr3.1:60185126-60185145 | None:intergenic | 15.0% |
| !!! | CTAAAAATCCTTTATTTTAT+TGG | + | chr3.1:60188013-60188032 | MS.gene30747:intron | 15.0% |
| !!! | TAATAGTAATTATGATTTTG+AGG | + | chr3.1:60185881-60185900 | MS.gene30747:CDS | 15.0% |
| !!! | TATTTATGAATTTGTTAGAT+CGG | + | chr3.1:60186748-60186767 | MS.gene30747:intron | 15.0% |
| !!! | TCTTTTTGAAAAAAAGTTTA+TGG | + | chr3.1:60187857-60187876 | MS.gene30747:intron | 15.0% |
| !!! | TTTTAGCCTAAAATTATTTT+TGG | + | chr3.1:60186909-60186928 | MS.gene30747:intron | 15.0% |
| !! | AATATTTACTATTATGGAGA+AGG | + | chr3.1:60183913-60183932 | MS.gene30747:CDS | 20.0% |
| !! | AATGTTATCATAAAGTAAAC+GGG | + | chr3.1:60185378-60185397 | MS.gene30747:intron | 20.0% |
| !! | ACTTTCAAATTTGTATCAAT+TGG | + | chr3.1:60186685-60186704 | MS.gene30747:intron | 20.0% |
| !! | ATAAAAAAGAACAGCATAAT+TGG | - | chr3.1:60185621-60185640 | None:intergenic | 20.0% |
| !! | ATATCCACATATTTAACAAA+TGG | + | chr3.1:60187600-60187619 | MS.gene30747:intron | 20.0% |
| !! | ATCTATGAAAAATAAAACAG+AGG | - | chr3.1:60186164-60186183 | None:intergenic | 20.0% |
| !! | CAAATTAAAAGTGAATATGA+TGG | + | chr3.1:60186192-60186211 | MS.gene30747:intron | 20.0% |
| !! | CAAATTCATAAATAGTTTCT+AGG | - | chr3.1:60186742-60186761 | None:intergenic | 20.0% |
| !! | CCATACATCTATTAAAAAAA+TGG | - | chr3.1:60186983-60187002 | None:intergenic | 20.0% |
| !! | GGACATAATCATAAAATTTA+AGG | - | chr3.1:60186284-60186303 | None:intergenic | 20.0% |
| !! | GTACAAATTTATAAGACAAA+AGG | - | chr3.1:60187214-60187233 | None:intergenic | 20.0% |
| !! | TAAAAAAAAAGATTACAGTC+CGG | - | chr3.1:60185578-60185597 | None:intergenic | 20.0% |
| !! | TAAACTAAATAGTATGGTAA+AGG | - | chr3.1:60187489-60187508 | None:intergenic | 20.0% |
| !! | TCAAGTAAATGAAAAATTCT+AGG | + | chr3.1:60186455-60186474 | MS.gene30747:intron | 20.0% |
| !! | TCCATAATAGTAAATATTTC+AGG | - | chr3.1:60183911-60183930 | None:intergenic | 20.0% |
| !! | TCCTGAAATATTTACTATTA+TGG | + | chr3.1:60183907-60183926 | MS.gene30747:CDS | 20.0% |
| !! | TGTTTAAACAAATTACTATC+GGG | + | chr3.1:60187960-60187979 | MS.gene30747:intron | 20.0% |
| !! | TTATAAGACAAAAGGAATAT+AGG | - | chr3.1:60187206-60187225 | None:intergenic | 20.0% |
| !! | TTTAGCAATAATTAAACGTA+AGG | - | chr3.1:60187998-60188017 | None:intergenic | 20.0% |
| !! | TTTGTATTAGCAACTTAAAA+TGG | - | chr3.1:60185154-60185173 | None:intergenic | 20.0% |
| !! | TTTGTTAAATATGTGGATAT+TGG | - | chr3.1:60187600-60187619 | None:intergenic | 20.0% |
| !!! | AGTGTAATTCTATTTGAAAT+TGG | + | chr3.1:60184907-60184926 | MS.gene30747:intron | 20.0% |
| !!! | ATGGTAATATCTTATTTTGT+TGG | + | chr3.1:60187619-60187638 | MS.gene30747:intron | 20.0% |
| !!! | ATTACCATTTGTTAAATATG+TGG | - | chr3.1:60187607-60187626 | None:intergenic | 20.0% |
| !!! | ATTTATGAATTTGTTAGATC+GGG | + | chr3.1:60186749-60186768 | MS.gene30747:intron | 20.0% |
| !!! | CAATTGTTTTTACTTTTTAC+AGG | + | chr3.1:60185716-60185735 | MS.gene30747:intron | 20.0% |
| !!! | CATACACTTTTAATATATCA+GGG | - | chr3.1:60186305-60186324 | None:intergenic | 20.0% |
| !!! | CCATTTTTTTAATAGATGTA+TGG | + | chr3.1:60186980-60186999 | MS.gene30747:intron | 20.0% |
| !!! | CTATTTTAATAGTTTGACTT+CGG | - | chr3.1:60187405-60187424 | None:intergenic | 20.0% |
| !!! | GTGTAATTCTATTTGAAATT+GGG | + | chr3.1:60184908-60184927 | MS.gene30747:intron | 20.0% |
| !!! | TATTTTAATAGTTTGACTTC+GGG | - | chr3.1:60187404-60187423 | None:intergenic | 20.0% |
| !!! | TCAGTTTACGTTAATTTTTT+TGG | + | chr3.1:60187427-60187446 | MS.gene30747:intron | 20.0% |
| !!! | TGGTTATATTGATTATGATA+AGG | + | chr3.1:60184354-60184373 | MS.gene30747:CDS | 20.0% |
| !!! | TTATGAGTTTTACTTGTTTT+GGG | + | chr3.1:60184573-60184592 | MS.gene30747:intron | 20.0% |
| !!! | TTTATGAGTTTTACTTGTTT+TGG | + | chr3.1:60184572-60184591 | MS.gene30747:intron | 20.0% |
| ! | AAGAATAGTATAGAGTAGAA+GGG | - | chr3.1:60187684-60187703 | None:intergenic | 25.0% |
| ! | ACAATATCACAGTAATCAAA+TGG | - | chr3.1:60185753-60185772 | None:intergenic | 25.0% |
| ! | ACAATTGTCAATATACATGA+AGG | - | chr3.1:60185703-60185722 | None:intergenic | 25.0% |
| ! | ATACAGTCTCATTTATTCTT+GGG | + | chr3.1:60187922-60187941 | MS.gene30747:intron | 25.0% |
| ! | ATGTTATCATAAAGTAAACG+GGG | + | chr3.1:60185379-60185398 | MS.gene30747:intron | 25.0% |
| ! | CAGATACTTTGAATTTGAAA+AGG | - | chr3.1:60186942-60186961 | None:intergenic | 25.0% |
| ! | CCTGAATACCAATAAAATAA+AGG | - | chr3.1:60188024-60188043 | None:intergenic | 25.0% |
| ! | CTATTATCTTCATGTTAGAT+AGG | + | chr3.1:60185320-60185339 | MS.gene30747:intron | 25.0% |
| ! | CTCAATTGATACTATTTGAA+GGG | + | chr3.1:60184608-60184627 | MS.gene30747:intron | 25.0% |
| ! | GATACAAATTTGAAAGTCTT+TGG | - | chr3.1:60186682-60186701 | None:intergenic | 25.0% |
| ! | GTGATAAGTTATAAACTTCA+AGG | - | chr3.1:60186564-60186583 | None:intergenic | 25.0% |
| ! | TAATCAATATAACCAGTCAA+AGG | - | chr3.1:60184349-60184368 | None:intergenic | 25.0% |
| ! | TATACAGTCTCATTTATTCT+TGG | + | chr3.1:60187921-60187940 | MS.gene30747:intron | 25.0% |
| ! | TCATCTTCTCTTCATTATAA+TGG | - | chr3.1:60185199-60185218 | None:intergenic | 25.0% |
| ! | TCTCAATTGATACTATTTGA+AGG | + | chr3.1:60184607-60184626 | MS.gene30747:intron | 25.0% |
| ! | TGATCTTGATTCAAGTAATT+GGG | + | chr3.1:60184129-60184148 | MS.gene30747:CDS | 25.0% |
| ! | TTGACTAATAAGTATTCAGA+GGG | + | chr3.1:60184022-60184041 | MS.gene30747:CDS | 25.0% |
| ! | TTGATCTTGATTCAAGTAAT+TGG | + | chr3.1:60184128-60184147 | MS.gene30747:CDS | 25.0% |
| ! | TTTGACTAATAAGTATTCAG+AGG | + | chr3.1:60184021-60184040 | MS.gene30747:CDS | 25.0% |
| !! | AGTTTATGGAAAATGAGTTT+TGG | + | chr3.1:60187871-60187890 | MS.gene30747:intron | 25.0% |
| !! | ATTTATGGTTCTATTTCTTC+GGG | + | chr3.1:60187341-60187360 | MS.gene30747:CDS | 25.0% |
| !! | CATTTATGGTTCTATTTCTT+CGG | + | chr3.1:60187340-60187359 | MS.gene30747:CDS | 25.0% |
| !! | CTTCAGTTTATGCATATTTT+TGG | - | chr3.1:60185040-60185059 | None:intergenic | 25.0% |
| !! | GCATACACTTTTAATATATC+AGG | - | chr3.1:60186306-60186325 | None:intergenic | 25.0% |
| !! | GTTTATGGAAAATGAGTTTT+GGG | + | chr3.1:60187872-60187891 | MS.gene30747:intron | 25.0% |
| !! | TATTGATTATGATAAGGTTG+AGG | + | chr3.1:60184360-60184379 | MS.gene30747:CDS | 25.0% |
| !! | TTTTTCATCATTTAGCAACA+TGG | - | chr3.1:60186253-60186272 | None:intergenic | 25.0% |
| !!! | AATGTGTTTTAGGAAACTTT+TGG | + | chr3.1:60187790-60187809 | MS.gene30747:intron | 25.0% |
| !!! | ATATTTTTGACCTCAGAAAT+CGG | + | chr3.1:60188196-60188215 | MS.gene30747:CDS | 25.0% |
| !!! | ATGTGTTTTAGGAAACTTTT+GGG | + | chr3.1:60187791-60187810 | MS.gene30747:intron | 25.0% |
| !!! | CCTTTATTTTATTGGTATTC+AGG | + | chr3.1:60188021-60188040 | MS.gene30747:intron | 25.0% |
| !!! | GCTGTTCTTTTTTATTTGTT+TGG | + | chr3.1:60185626-60185645 | MS.gene30747:intron | 25.0% |
| AAACACAACCTTGAGTTAAA+AGG | - | chr3.1:60186844-60186863 | None:intergenic | 30.0% | |
| AAATCTATCTTTATCCCACT+AGG | + | chr3.1:60186516-60186535 | MS.gene30747:intron | 30.0% | |
| AAGGTAGCAAAATGAAAAGA+AGG | - | chr3.1:60186545-60186564 | None:intergenic | 30.0% | |
| AATCACATACACAATAAGAC+AGG | - | chr3.1:60184705-60184724 | None:intergenic | 30.0% | |
| AATCTCCTCTTGAAACAAAT+AGG | - | chr3.1:60183791-60183810 | None:intergenic | 30.0% | |
| ACAATACTGTATACGATACA+AGG | - | chr3.1:60185529-60185548 | None:intergenic | 30.0% | |
| AGTCATGGTTATTATACTCA+TGG | + | chr3.1:60184265-60184284 | MS.gene30747:CDS | 30.0% | |
| ATAGAGATATTTGACTCAAG+TGG | + | chr3.1:60187027-60187046 | MS.gene30747:intron | 30.0% | |
| ATGGTTATTATACTCATGGT+GGG | + | chr3.1:60184269-60184288 | MS.gene30747:CDS | 30.0% | |
| ATGTGATTCATAAAAGGACA+AGG | - | chr3.1:60185472-60185491 | None:intergenic | 30.0% | |
| CAAATTTGAAAGTCTTTGGA+TGG | - | chr3.1:60186678-60186697 | None:intergenic | 30.0% | |
| CAAGAATAGTATAGAGTAGA+AGG | - | chr3.1:60187685-60187704 | None:intergenic | 30.0% | |
| CGAAGAAATAGAACCATAAA+TGG | - | chr3.1:60187342-60187361 | None:intergenic | 30.0% | |
| CTCCAACAAATTCATCAAAT+GGG | + | chr3.1:60183582-60183601 | MS.gene30747:CDS | 30.0% | |
| CTTGAAAAACGAATCTTCTA+TGG | - | chr3.1:60187717-60187736 | None:intergenic | 30.0% | |
| GAAAAGTTGAGACAGTTTAA+AGG | + | chr3.1:60183935-60183954 | MS.gene30747:CDS | 30.0% | |
| GATCTTGATTCAAGTAATTG+GGG | + | chr3.1:60184130-60184149 | MS.gene30747:CDS | 30.0% | |
| GTCAAAGGATTAACCTTATA+AGG | - | chr3.1:60184334-60184353 | None:intergenic | 30.0% | |
| GTTGAAAAGAAAATGCAGAT+TGG | + | chr3.1:60186061-60186080 | MS.gene30747:CDS | 30.0% | |
| TAGGAGATGTGATTCATAAA+AGG | - | chr3.1:60185478-60185497 | None:intergenic | 30.0% | |
| TAGTTCTTATCCTAGAGAAT+GGG | + | chr3.1:60184426-60184445 | MS.gene30747:CDS | 30.0% | |
| TATAAGGTTAATCCTTTGAC+TGG | + | chr3.1:60184334-60184353 | MS.gene30747:CDS | 30.0% | |
| TATACAAAACTCAACAACAG+AGG | - | chr3.1:60187105-60187124 | None:intergenic | 30.0% | |
| TCATTATAATGGTTCACTTC+AGG | - | chr3.1:60185188-60185207 | None:intergenic | 30.0% | |
| TCTCCAACAAATTCATCAAA+TGG | + | chr3.1:60183581-60183600 | MS.gene30747:CDS | 30.0% | |
| TGTGGATATTGGATCTTATA+TGG | - | chr3.1:60187589-60187608 | None:intergenic | 30.0% | |
| TGTGTTTACTCGATAAGTAA+TGG | + | chr3.1:60186857-60186876 | MS.gene30747:intron | 30.0% | |
| TTAACATGAACATTGTTGTC+TGG | - | chr3.1:60183689-60183708 | None:intergenic | 30.0% | |
| TTAGCTGAAGTACATGAATA+AGG | - | chr3.1:60184169-60184188 | None:intergenic | 30.0% | |
| ! | AAACAATTGATTTCATGGGT+AGG | + | chr3.1:60183765-60183784 | MS.gene30747:CDS | 30.0% |
| ! | AGGTGAAACAATTGATTTCA+TGG | + | chr3.1:60183760-60183779 | MS.gene30747:CDS | 30.0% |
| ! | ATCATGCAAAGATTTTCTCA+AGG | + | chr3.1:60188155-60188174 | MS.gene30747:CDS | 30.0% |
| ! | CTGATCAATATACTGATTAC+CGG | - | chr3.1:60184071-60184090 | None:intergenic | 30.0% |
| ! | GGCTTAATATTTCTTTTGGT+GGG | + | chr3.1:60185400-60185419 | MS.gene30747:intron | 30.0% |
| ! | GGTGAAACAATTGATTTCAT+GGG | + | chr3.1:60183761-60183780 | MS.gene30747:CDS | 30.0% |
| ! | GTATTGTCTTTTACCGAAAA+GGG | + | chr3.1:60185814-60185833 | MS.gene30747:CDS | 30.0% |
| ! | TCATGCAAAGATTTTCTCAA+GGG | + | chr3.1:60188156-60188175 | MS.gene30747:CDS | 30.0% |
| ! | TGGAAGGAAAAATGTGTTTT+AGG | + | chr3.1:60187780-60187799 | MS.gene30747:intron | 30.0% |
| !! | TATTTTTGACCTCAGAAATC+GGG | + | chr3.1:60188197-60188216 | MS.gene30747:CDS | 30.0% |
| !! | TTCTGAGAATTTTGTTTGCA+GGG | + | chr3.1:60183973-60183992 | MS.gene30747:CDS | 30.0% |
| !! | TTTGATGAATTTGTTGGAGA+TGG | - | chr3.1:60183581-60183600 | None:intergenic | 30.0% |
| !!! | AACACAACAAAGTTTTGTTC+CGG | + | chr3.1:60183820-60183839 | MS.gene30747:CDS | 30.0% |
| !!! | GCTAATTTTGCTGTTTATAC+TGG | + | chr3.1:60184184-60184203 | MS.gene30747:CDS | 30.0% |
| !!! | GGTTTGGTTTTGAATTCAAA+TGG | - | chr3.1:60183634-60183653 | None:intergenic | 30.0% |
| !!! | TAATCTTTGTCTGGTTTTCA+TGG | + | chr3.1:60185069-60185088 | MS.gene30747:intron | 30.0% |
| !!! | TGTGTTTTAGGAAACTTTTG+GGG | + | chr3.1:60187792-60187811 | MS.gene30747:intron | 30.0% |
| !!! | TTTTGAGACTTTGCCTTATA+AGG | + | chr3.1:60184318-60184337 | MS.gene30747:CDS | 30.0% |
| AAACTATGAGAAGGTTTGTG+AGG | + | chr3.1:60187289-60187308 | MS.gene30747:CDS | 35.0% | |
| AAGATAAACCTCGCATATCT+TGG | - | chr3.1:60186611-60186630 | None:intergenic | 35.0% | |
| AATCCTGGTGATAGGATTAT+GGG | + | chr3.1:60184214-60184233 | MS.gene30747:CDS | 35.0% | |
| ACTCTATACTATTCTTGTGC+TGG | + | chr3.1:60187688-60187707 | MS.gene30747:intron | 35.0% | |
| AGAAATTTCACGTGTGTAAC+CGG | + | chr3.1:60185556-60185575 | MS.gene30747:intron | 35.0% | |
| AGATTACCAGCATTATACAG+AGG | + | chr3.1:60188121-60188140 | MS.gene30747:CDS | 35.0% | |
| AGGAAGATTGCTGATAAATG+TGG | + | chr3.1:60184463-60184482 | MS.gene30747:CDS | 35.0% | |
| AGTTGTTTGTGAAATGTGAG+TGG | + | chr3.1:60185431-60185450 | MS.gene30747:intron | 35.0% | |
| ATAACTGCACTCGGTTTAAT+TGG | + | chr3.1:60186122-60186141 | MS.gene30747:CDS | 35.0% | |
| ATGAGCAATAGACAGTTAGT+AGG | + | chr3.1:60186801-60186820 | MS.gene30747:intron | 35.0% | |
| ATGCACAAGTCAATTCTTTG+TGG | + | chr3.1:60186406-60186425 | MS.gene30747:intron | 35.0% | |
| ATTCCAACAAACTCGATGAT+AGG | - | chr3.1:60184876-60184895 | None:intergenic | 35.0% | |
| CAATTTACATTCCACCAAAC+AGG | - | chr3.1:60185006-60185025 | None:intergenic | 35.0% | |
| CATGGTTATTATACTCATGG+TGG | + | chr3.1:60184268-60184287 | MS.gene30747:CDS | 35.0% | |
| CCACCACAAATAAGTATCTT+CGG | - | chr3.1:60184406-60184425 | None:intergenic | 35.0% | |
| CTTTGCTTTGTAGACATGTT+TGG | + | chr3.1:60184672-60184691 | MS.gene30747:intron | 35.0% | |
| GAAGGGTAGAGTTAGATATA+TGG | + | chr3.1:60184625-60184644 | MS.gene30747:intron | 35.0% | |
| GACCCATTTGATGAATTTGT+TGG | - | chr3.1:60183587-60183606 | None:intergenic | 35.0% | |
| GATTACCAGCATTATACAGA+GGG | + | chr3.1:60188122-60188141 | MS.gene30747:CDS | 35.0% | |
| GTAGTTCTTATCCTAGAGAA+TGG | + | chr3.1:60184425-60184444 | MS.gene30747:CDS | 35.0% | |
| TAAAAGACAATACCTCCTCT+TGG | - | chr3.1:60185807-60185826 | None:intergenic | 35.0% | |
| TACAGACAGAAACTATGAGA+AGG | + | chr3.1:60187280-60187299 | MS.gene30747:intron | 35.0% | |
| TAGGATTATGGGTTTGGATT+CGG | + | chr3.1:60184225-60184244 | MS.gene30747:CDS | 35.0% | |
| TATACGATACAAGGATGACT+TGG | - | chr3.1:60185520-60185539 | None:intergenic | 35.0% | |
| TCATGAAGGAAACTAATTGC+CGG | + | chr3.1:60184965-60184984 | MS.gene30747:intron | 35.0% | |
| TCCTTCATGAAGGTGATTAA+CGG | - | chr3.1:60184955-60184974 | None:intergenic | 35.0% | |
| TCGTGTATCTAATCTTTGTC+TGG | + | chr3.1:60185060-60185079 | MS.gene30747:intron | 35.0% | |
| TGATAGGAAAGAGCCAAAAA+AGG | - | chr3.1:60184860-60184879 | None:intergenic | 35.0% | |
| TGCATGTATGCTTTATACTC+TGG | - | chr3.1:60186002-60186021 | None:intergenic | 35.0% | |
| TGGAATGTAAATTGCCTAGA+TGG | + | chr3.1:60185012-60185031 | MS.gene30747:intron | 35.0% | |
| TTGTTTCAAGAGGAGATTAG+AGG | + | chr3.1:60183793-60183812 | MS.gene30747:CDS | 35.0% | |
| TTTACTATTTGCCTGTTTGG+TGG | + | chr3.1:60184992-60185011 | MS.gene30747:intron | 35.0% | |
| TTTCCTATCATCGAGTTTGT+TGG | + | chr3.1:60184870-60184889 | MS.gene30747:intron | 35.0% | |
| TTTGTTTGGCGCTTTGTAAA+AGG | + | chr3.1:60185640-60185659 | MS.gene30747:intron | 35.0% | |
| ! | AAATGCAGATTGGTTACTGA+TGG | + | chr3.1:60186071-60186090 | MS.gene30747:CDS | 35.0% |
| ! | ACGGGGCTTAATATTTCTTT+TGG | + | chr3.1:60185396-60185415 | MS.gene30747:intron | 35.0% |
| ! | AGATCGAGATGATGCATTTT+TGG | + | chr3.1:60185225-60185244 | MS.gene30747:intron | 35.0% |
| ! | ATTTTTCCTTCCAACAGAGT+GGG | - | chr3.1:60187773-60187792 | None:intergenic | 35.0% |
| ! | GCAATTAGTTTCCTTCATGA+AGG | - | chr3.1:60184965-60184984 | None:intergenic | 35.0% |
| ! | GGGCTTAATATTTCTTTTGG+TGG | + | chr3.1:60185399-60185418 | MS.gene30747:intron | 35.0% |
| ! | GGTATTGTCTTTTACCGAAA+AGG | + | chr3.1:60185813-60185832 | MS.gene30747:CDS | 35.0% |
| ! | TGACAATCATCTTTTGCTCT+GGG | + | chr3.1:60186097-60186116 | MS.gene30747:CDS | 35.0% |
| ! | TTACTATCGGGTCTTTTGAA+TGG | + | chr3.1:60187972-60187991 | MS.gene30747:intron | 35.0% |
| !! | ATTCCTTAGTTCTAGCATGT+AGG | + | chr3.1:60184809-60184828 | MS.gene30747:intron | 35.0% |
| !! | CAAGGCTTTGTTCTTAATCA+TGG | + | chr3.1:60185852-60185871 | MS.gene30747:CDS | 35.0% |
| !! | CTCAATAAGTGTGCCATTTA+TGG | + | chr3.1:60187326-60187345 | MS.gene30747:CDS | 35.0% |
| !! | CTTCTGAGAATTTTGTTTGC+AGG | + | chr3.1:60183972-60183991 | MS.gene30747:CDS | 35.0% |
| !! | TAGTATTTTGAGTCCATGCT+TGG | + | chr3.1:60187507-60187526 | MS.gene30747:intron | 35.0% |
| !!! | CAAAATGACCTCACCTTTTT+TGG | + | chr3.1:60184844-60184863 | MS.gene30747:intron | 35.0% |
| !!! | GCATATTTTTGGAACCATCT+AGG | - | chr3.1:60185029-60185048 | None:intergenic | 35.0% |
| !!! | TATACTGGTCTTTTGAATCC+TGG | + | chr3.1:60184199-60184218 | MS.gene30747:CDS | 35.0% |
| !!! | TTGTCTGGTTTTCATGGTAA+AGG | + | chr3.1:60185075-60185094 | MS.gene30747:intron | 35.0% |
| AAACCCATAATCCTATCACC+AGG | - | chr3.1:60184220-60184239 | None:intergenic | 40.0% | |
| AACCAAACCCTTCTCTTTCA+TGG | + | chr3.1:60183645-60183664 | MS.gene30747:CDS | 40.0% | |
| AAGTGTGTCAAGTCATGCTA+TGG | - | chr3.1:60185676-60185695 | None:intergenic | 40.0% | |
| AATGGGATTATGCGAGGTTT+AGG | + | chr3.1:60184443-60184462 | MS.gene30747:CDS | 40.0% | |
| ACTATTTGCCAAGATATGCG+AGG | + | chr3.1:60186600-60186619 | MS.gene30747:intron | 40.0% | |
| AGCAGCAATGTGATTGTTGT+GGG | - | chr3.1:60185949-60185968 | None:intergenic | 40.0% | |
| AGCATTATACAGAGGGAACA+TGG | + | chr3.1:60188129-60188148 | MS.gene30747:CDS | 40.0% | |
| AGGCCGAAGATACTTATTTG+TGG | + | chr3.1:60184400-60184419 | MS.gene30747:CDS | 40.0% | |
| AGTAAACGCCATGAAAGAGA+AGG | - | chr3.1:60183656-60183675 | None:intergenic | 40.0% | |
| AGTTAGTAGGAGTCTCTGTA+TGG | + | chr3.1:60186814-60186833 | MS.gene30747:intron | 40.0% | |
| ATGAAAAGAAGGCAACCTAG+TGG | - | chr3.1:60186534-60186553 | None:intergenic | 40.0% | |
| ATGAAGGAAACTAATTGCCG+GGG | + | chr3.1:60184967-60184986 | MS.gene30747:intron | 40.0% | |
| ATGTTCCCTCTGTATAATGC+TGG | - | chr3.1:60188130-60188149 | None:intergenic | 40.0% | |
| CATGAAGGAAACTAATTGCC+GGG | + | chr3.1:60184966-60184985 | MS.gene30747:intron | 40.0% | |
| CCGAAGATACTTATTTGTGG+TGG | + | chr3.1:60184403-60184422 | MS.gene30747:CDS | 40.0% | |
| CTTCCTACATGCTAGAACTA+AGG | - | chr3.1:60184815-60184834 | None:intergenic | 40.0% | |
| GAATCCTGGCATTTCAAACT+GGG | - | chr3.1:60188238-60188257 | None:intergenic | 40.0% | |
| GAATCCTGGTGATAGGATTA+TGG | + | chr3.1:60184213-60184232 | MS.gene30747:CDS | 40.0% | |
| GAGATATTTGACTCAAGTGG+TGG | + | chr3.1:60187030-60187049 | MS.gene30747:intron | 40.0% | |
| GATGAAGTTGTTGATGCTGA+TGG | + | chr3.1:60183728-60183747 | MS.gene30747:CDS | 40.0% | |
| GCTTTATACCCATCGTTACA+AGG | + | chr3.1:60185918-60185937 | MS.gene30747:CDS | 40.0% | |
| GGGTTTACTATTTGCCTGTT+TGG | + | chr3.1:60184989-60185008 | MS.gene30747:intron | 40.0% | |
| GTAAACGCCATGAAAGAGAA+GGG | - | chr3.1:60183655-60183674 | None:intergenic | 40.0% | |
| GTAGGCCTATTTGTTTCAAG+AGG | + | chr3.1:60183783-60183802 | MS.gene30747:CDS | 40.0% | |
| GTATAAAGCATACATGCAGC+AGG | + | chr3.1:60186004-60186023 | MS.gene30747:CDS | 40.0% | |
| GTGAAATGTGAGTGGATAGT+GGG | + | chr3.1:60185439-60185458 | MS.gene30747:intron | 40.0% | |
| GTTAGTAGGAGTCTCTGTAT+GGG | + | chr3.1:60186815-60186834 | MS.gene30747:intron | 40.0% | |
| TAAGTATTCAGAGGGAATGC+CGG | + | chr3.1:60184030-60184049 | MS.gene30747:CDS | 40.0% | |
| TATCTTGGCAAATAGTCCTC+AGG | - | chr3.1:60186596-60186615 | None:intergenic | 40.0% | |
| TCCGTTAATCACCTTCATGA+AGG | + | chr3.1:60184951-60184970 | MS.gene30747:intron | 40.0% | |
| TGAAAAGAAGGCAACCTAGT+GGG | - | chr3.1:60186533-60186552 | None:intergenic | 40.0% | |
| TGAATCCTGGCATTTCAAAC+TGG | - | chr3.1:60188239-60188258 | None:intergenic | 40.0% | |
| TGGTGATAGGATTATGGGTT+TGG | + | chr3.1:60184219-60184238 | MS.gene30747:CDS | 40.0% | |
| TGTGAAATGTGAGTGGATAG+TGG | + | chr3.1:60185438-60185457 | MS.gene30747:intron | 40.0% | |
| TTATACCCATCGTTACAAGG+AGG | + | chr3.1:60185921-60185940 | MS.gene30747:CDS | 40.0% | |
| ! | AGGAGAAAGCTGTGGATTAT+AGG | + | chr3.1:60184380-60184399 | MS.gene30747:CDS | 40.0% |
| ! | CATGGCAGATTTTCTTCTGA+GGG | + | chr3.1:60188092-60188111 | MS.gene30747:CDS | 40.0% |
| ! | CATTTTTCCTTCCAACAGAG+TGG | - | chr3.1:60187774-60187793 | None:intergenic | 40.0% |
| ! | CGCAACTTGTTTCAAAGCTA+TGG | - | chr3.1:60185976-60185995 | None:intergenic | 40.0% |
| ! | CTGACAATCATCTTTTGCTC+TGG | + | chr3.1:60186096-60186115 | MS.gene30747:CDS | 40.0% |
| ! | GTCTTTTGAATCCTGGTGAT+AGG | + | chr3.1:60184206-60184225 | MS.gene30747:CDS | 40.0% |
| ! | TATGGTTCTATTTCTTCGGG+AGG | + | chr3.1:60187344-60187363 | MS.gene30747:CDS | 40.0% |
| ! | TTATACTCATGGTGGGAAGA+AGG | + | chr3.1:60184276-60184295 | MS.gene30747:CDS | 40.0% |
| ! | TTTTTCCTTCCAACAGAGTG+GGG | - | chr3.1:60187772-60187791 | None:intergenic | 40.0% |
| !! | AAGACTTTTGTGGGTTGTTG+AGG | - | chr3.1:60185778-60185797 | None:intergenic | 40.0% |
| !! | AAGGATGACTTGGTTGTTAG+GGG | - | chr3.1:60185510-60185529 | None:intergenic | 40.0% |
| !! | ACAAGGATGACTTGGTTGTT+AGG | - | chr3.1:60185512-60185531 | None:intergenic | 40.0% |
| !! | AGAAATCGGGTTGAGACATT+TGG | + | chr3.1:60188210-60188229 | MS.gene30747:CDS | 40.0% |
| !! | CAAGGATGACTTGGTTGTTA+GGG | - | chr3.1:60185511-60185530 | None:intergenic | 40.0% |
| !! | CTTAGTTCTAGCATGTAGGA+AGG | + | chr3.1:60184813-60184832 | MS.gene30747:intron | 40.0% |
| !! | TCATATCAGTGGTCTTGTTG+CGG | + | chr3.1:60184510-60184529 | MS.gene30747:CDS | 40.0% |
| !! | TGAATTTGTTGGAGATGGCA+TGG | - | chr3.1:60183576-60183595 | None:intergenic | 40.0% |
| !!! | AGCTGTTTTGATGTGTGACA+TGG | + | chr3.1:60184486-60184505 | MS.gene30747:CDS | 40.0% |
| AAAAGTCTTCGAGGTCCAAG+AGG | + | chr3.1:60185789-60185808 | MS.gene30747:CDS | 45.0% | |
| AAGTATTCAGAGGGAATGCC+GGG | + | chr3.1:60184031-60184050 | MS.gene30747:CDS | 45.0% | |
| ACAACCCACAAAAGTCTTCG+AGG | + | chr3.1:60185780-60185799 | MS.gene30747:CDS | 45.0% | |
| ACTCCTGCAATGACATCAAG+AGG | + | chr3.1:60188045-60188064 | MS.gene30747:CDS | 45.0% | |
| AGAACAAAGCCTTGCTTCCT+TGG | - | chr3.1:60185846-60185865 | None:intergenic | 45.0% | |
| ATGTCTCAACCCGATTTCTG+AGG | - | chr3.1:60188209-60188228 | None:intergenic | 45.0% | |
| ATTTGACTCAAGTGGTGGCA+AGG | + | chr3.1:60187035-60187054 | MS.gene30747:intron | 45.0% | |
| CAAAACTCAACAACAGAGGC+TGG | - | chr3.1:60187101-60187120 | None:intergenic | 45.0% | |
| CCGGGAGCGAAATATTATAC+CGG | + | chr3.1:60184049-60184068 | MS.gene30747:CDS | 45.0% | |
| CCGGTATAATATTTCGCTCC+CGG | - | chr3.1:60184052-60184071 | None:intergenic | 45.0% | |
| CCTCAGAAGAAAATCTGCCA+TGG | - | chr3.1:60188094-60188113 | None:intergenic | 45.0% | |
| CTAGAGAATGGGATTATGCG+AGG | + | chr3.1:60184437-60184456 | MS.gene30747:CDS | 45.0% | |
| CTCGCATAATCCCATTCTCT+AGG | - | chr3.1:60184439-60184458 | None:intergenic | 45.0% | |
| GACATCAAGAGGCTGTTTAG+AGG | + | chr3.1:60188056-60188075 | MS.gene30747:CDS | 45.0% | |
| GAGCAGCAATGTGATTGTTG+TGG | - | chr3.1:60185950-60185969 | None:intergenic | 45.0% | |
| GCAGCAATGTGATTGTTGTG+GGG | - | chr3.1:60185948-60185967 | None:intergenic | 45.0% | |
| GGAAAGAGCCAAAAAAGGTG+AGG | - | chr3.1:60184855-60184874 | None:intergenic | 45.0% | |
| GTTCTAGCATGTAGGAAGGA+TGG | + | chr3.1:60184817-60184836 | MS.gene30747:intron | 45.0% | |
| TAAGGTTGAGGAGAAAGCTG+TGG | + | chr3.1:60184372-60184391 | MS.gene30747:CDS | 45.0% | |
| TCAGGATCAGCAACACTCAA+AGG | - | chr3.1:60183893-60183912 | None:intergenic | 45.0% | |
| TGAAGGAAACTAATTGCCGG+GGG | + | chr3.1:60184968-60184987 | MS.gene30747:intron | 45.0% | |
| TGTGACATGGCTCATATCAG+TGG | + | chr3.1:60184499-60184518 | MS.gene30747:CDS | 45.0% | |
| TTATCACTCTTCTCCTCCTG+AGG | + | chr3.1:60186577-60186596 | MS.gene30747:intron | 45.0% | |
| ! | AAGCCTTGCTTCCTTGGTTT+TGG | - | chr3.1:60185840-60185859 | None:intergenic | 45.0% |
| ! | CCATGGCAGATTTTCTTCTG+AGG | + | chr3.1:60188091-60188110 | MS.gene30747:CDS | 45.0% |
| ! | GATGCTGATGGTGAAGAAGA+AGG | + | chr3.1:60183740-60183759 | MS.gene30747:CDS | 45.0% |
| ! | TCATGGTGGGAAGAAGGTTT+CGG | + | chr3.1:60184282-60184301 | MS.gene30747:CDS | 45.0% |
| ! | TCTGGTGGACATTTGAGTCA+TGG | + | chr3.1:60184250-60184269 | MS.gene30747:CDS | 45.0% |
| ! | TGGACCTCGAAGACTTTTGT+GGG | - | chr3.1:60185787-60185806 | None:intergenic | 45.0% |
| ! | TTGGACCTCGAAGACTTTTG+TGG | - | chr3.1:60185788-60185807 | None:intergenic | 45.0% |
| ! | TTGTTAGGGGTGTGGGATAT+AGG | - | chr3.1:60185497-60185516 | None:intergenic | 45.0% |
| !! | ATGGGCGTCCTTTTAACTCA+AGG | + | chr3.1:60186833-60186852 | MS.gene30747:intron | 45.0% |
| !! | ATTCTAAGGCTGTGAGTTGG+GGG | + | chr3.1:60183861-60183880 | MS.gene30747:CDS | 45.0% |
| !! | CTCTGGGATATAACTGCACT+CGG | + | chr3.1:60186113-60186132 | MS.gene30747:CDS | 45.0% |
| !! | GATTCTAAGGCTGTGAGTTG+GGG | + | chr3.1:60183860-60183879 | MS.gene30747:CDS | 45.0% |
| !! | GGATTCTAAGGCTGTGAGTT+GGG | + | chr3.1:60183859-60183878 | MS.gene30747:CDS | 45.0% |
| !! | TGGATTCTAAGGCTGTGAGT+TGG | + | chr3.1:60183858-60183877 | MS.gene30747:CDS | 45.0% |
| !! | TTTTGTTTGCAGGGCTGTGA+TGG | + | chr3.1:60183982-60184001 | MS.gene30747:CDS | 45.0% |
| !!! | AGAGGACGATTTTGAGACCA+TGG | + | chr3.1:60188074-60188093 | MS.gene30747:CDS | 45.0% |
| !!! | TCCTTGGTTTTGGCCCTTTT+CGG | - | chr3.1:60185830-60185849 | None:intergenic | 45.0% |
| ACCGAAAAGGGCCAAAACCA+AGG | + | chr3.1:60185826-60185845 | MS.gene30747:CDS | 50.0% | |
| CAGCCTCTTGATGTCATTGC+AGG | - | chr3.1:60188051-60188070 | None:intergenic | 50.0% | |
| CAGGCAAATAGTAAACCCCC+CGG | - | chr3.1:60184987-60185006 | None:intergenic | 50.0% | |
| CGCCATGAAAGAGAAGGGTT+TGG | - | chr3.1:60183650-60183669 | None:intergenic | 50.0% | |
| CTTGGCAAATAGTCCTCAGG+AGG | - | chr3.1:60186593-60186612 | None:intergenic | 50.0% | |
| GAAGGAAACTAATTGCCGGG+GGG | + | chr3.1:60184969-60184988 | MS.gene30747:intron | 50.0% | |
| TCTTCGGGAGGAGTGAGAAT+CGG | + | chr3.1:60187356-60187375 | MS.gene30747:CDS | 50.0% | |
| TTATGCCCCACTCTGTTGGA+AGG | + | chr3.1:60187764-60187783 | MS.gene30747:intron | 50.0% | |
| ! | CACAAGCGGGTTTATCACTG+GGG | + | chr3.1:60183540-60183559 | MS.gene30747:CDS | 50.0% |
| ! | GACTTGGTTGTTAGGGGTGT+GGG | - | chr3.1:60185504-60185523 | None:intergenic | 50.0% |
| ! | GCACAAGCGGGTTTATCACT+GGG | + | chr3.1:60183539-60183558 | MS.gene30747:CDS | 50.0% |
| ! | TGCACAAGCGGGTTTATCAC+TGG | + | chr3.1:60183538-60183557 | MS.gene30747:CDS | 50.0% |
| !! | TGACTTGGTTGTTAGGGGTG+TGG | - | chr3.1:60185505-60185524 | None:intergenic | 50.0% |
| AGTCTTCGAGGTCCAAGAGG+AGG | + | chr3.1:60185792-60185811 | MS.gene30747:CDS | 55.0% | |
| ATGGGTTTGGATTCGGCGTC+TGG | + | chr3.1:60184232-60184251 | MS.gene30747:CDS | 55.0% | |
| GCTCTTATGCCCCACTCTGT+TGG | + | chr3.1:60187760-60187779 | MS.gene30747:intron | 55.0% | |
| GGGCCAAAACCAAGGAAGCA+AGG | + | chr3.1:60185834-60185853 | MS.gene30747:CDS | 55.0% | |
| GGGGACCTCCTTGTAACGAT+GGG | - | chr3.1:60185929-60185948 | None:intergenic | 55.0% | |
| TGGGGACCTCCTTGTAACGA+TGG | - | chr3.1:60185930-60185949 | None:intergenic | 55.0% | |
| TGGTGGGAAGAAGGTTTCGG+CGG | + | chr3.1:60184285-60184304 | MS.gene30747:CDS | 55.0% | |
| TTGGGGAAGCGAAGATGACG+AGG | + | chr3.1:60187809-60187828 | MS.gene30747:intron | 55.0% | |
| ! | GGCTCCCAGTTTGAAATGCC+AGG | + | chr3.1:60188231-60188250 | MS.gene30747:CDS | 55.0% |
| !! | AGGGCTGTGATGGAAGCACT+TGG | + | chr3.1:60183992-60184011 | MS.gene30747:CDS | 55.0% |
| !! | CAGTGGTCTTGTTGCGGCTA+AGG | + | chr3.1:60184516-60184535 | MS.gene30747:CDS | 55.0% |
| GGTTTGGATTCGGCGTCTGG+TGG | + | chr3.1:60184235-60184254 | MS.gene30747:CDS | 60.0% | |
| ! | GCGTGTCGCGGTGGATTCTA+AGG | + | chr3.1:60183847-60183866 | MS.gene30747:CDS | 60.0% |
| TGTTCCGGCGAAGCGTGTCG+CGG | + | chr3.1:60183835-60183854 | MS.gene30747:CDS | 65.0% | |
| TCCACCGCGACACGCTTCGC+CGG | - | chr3.1:60183842-60183861 | None:intergenic | 70.0% | |
| TCCGGCGAAGCGTGTCGCGG+TGG | + | chr3.1:60183838-60183857 | MS.gene30747:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 60183533 | 60188266 | 60183533 | ID=MS.gene30747 |
| chr3.1 | mRNA | 60183533 | 60188266 | 60183533 | ID=MS.gene30747.t1;Parent=MS.gene30747 |
| chr3.1 | exon | 60183533 | 60184537 | 60183533 | ID=MS.gene30747.t1.exon1;Parent=MS.gene30747.t1 |
| chr3.1 | CDS | 60183533 | 60184537 | 60183533 | ID=cds.MS.gene30747.t1;Parent=MS.gene30747.t1 |
| chr3.1 | exon | 60185738 | 60186143 | 60185738 | ID=MS.gene30747.t1.exon2;Parent=MS.gene30747.t1 |
| chr3.1 | CDS | 60185738 | 60186143 | 60185738 | ID=cds.MS.gene30747.t1;Parent=MS.gene30747.t1 |
| chr3.1 | exon | 60187285 | 60187377 | 60187285 | ID=MS.gene30747.t1.exon3;Parent=MS.gene30747.t1 |
| chr3.1 | CDS | 60187285 | 60187377 | 60187285 | ID=cds.MS.gene30747.t1;Parent=MS.gene30747.t1 |
| chr3.1 | exon | 60188043 | 60188266 | 60188043 | ID=MS.gene30747.t1.exon4;Parent=MS.gene30747.t1 |
| chr3.1 | CDS | 60188043 | 60188266 | 60188043 | ID=cds.MS.gene30747.t1;Parent=MS.gene30747.t1 |
| Gene Sequence |
| Protein sequence |
