Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30775.t1 | XP_003601097.2 | 90.2 | 470 | 23 | 1 | 1 | 447 | 1 | 470 | 3.00E-242 | 847.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30775.t1 | Q7XJS0 | 64.2 | 441 | 154 | 1 | 12 | 448 | 35 | 475 | 6.5e-169 | 595.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30775.t1 | G7J3L4 | 90.2 | 470 | 23 | 1 | 1 | 447 | 1 | 470 | 2.2e-242 | 847.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene30775.t1 | TR | SET |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050787 | MS.gene30775 | 0.807917 | 4.00E-50 | -1.69E-46 |
| MS.gene054468 | MS.gene30775 | 0.806299 | 8.80E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30775.t1 | MTR_3g073000 | 90.213 | 470 | 23 | 1 | 1 | 447 | 1 | 470 | 0.0 | 869 |
| MS.gene30775.t1 | MTR_3g073000 | 82.979 | 470 | 22 | 2 | 1 | 447 | 1 | 435 | 0.0 | 783 |
| MS.gene30775.t1 | MTR_3g073000 | 87.629 | 388 | 25 | 1 | 1 | 365 | 1 | 388 | 0.0 | 696 |
| MS.gene30775.t1 | MTR_3g093440 | 28.205 | 156 | 95 | 4 | 159 | 312 | 459 | 599 | 1.15e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene30775.t1 | AT2G17900 | 64.172 | 441 | 154 | 1 | 12 | 448 | 40 | 480 | 0.0 | 611 |
Find 80 sgRNAs with CRISPR-Local
Find 286 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCTCTTTAATATTGATTTC+AGG | 0.234425 | 3.1:+59763726 | None:intergenic |
| CTCTTACTAACCCACATTCT+TGG | 0.284514 | 3.1:+59762197 | None:intergenic |
| TGATCTTGATATAGGTATCT+TGG | 0.355193 | 3.1:-59759812 | MS.gene30775:intron |
| ATCAATAGTTCCTTCACTAA+TGG | 0.370780 | 3.1:+59759716 | None:intergenic |
| GGTTTCTTGCTCCGCACAAC+TGG | 0.393388 | 3.1:-59762392 | MS.gene30775:intron |
| CCAGCTGTTCACCCTTTGCT+TGG | 0.395564 | 3.1:-59760309 | MS.gene30775:CDS |
| CGAGAAAATGCAATTCTAGA+AGG | 0.401251 | 3.1:-59762443 | MS.gene30775:CDS |
| GCTCACGTTGTCAAGTTGTT+TGG | 0.406177 | 3.1:-59764586 | MS.gene30775:CDS |
| GATGGCATACTTTGATAGAT+TGG | 0.406419 | 3.1:+59761149 | None:intergenic |
| TGGTTACCTGTGATTGATAA+TGG | 0.407535 | 3.1:+59763503 | None:intergenic |
| TGACAGTGAGTTAAGACCTC+TGG | 0.417510 | 3.1:-59763550 | MS.gene30775:CDS |
| ATACTTGTGGAAAACTTGAA+TGG | 0.426325 | 3.1:-59760275 | MS.gene30775:intron |
| CAAGTTAGTGGACGCATTAG+TGG | 0.432256 | 3.1:-59763915 | MS.gene30775:CDS |
| TGCATCAAATTGATCGAGAA+AGG | 0.433641 | 3.1:+59761858 | None:intergenic |
| GAGTTAAGACCTCTGGGAAC+AGG | 0.450124 | 3.1:-59763543 | MS.gene30775:CDS |
| CCAAGCAAAGGGTGAACAGC+TGG | 0.455085 | 3.1:+59760309 | None:intergenic |
| TTTGCAGTCATTAATGAAGC+TGG | 0.455096 | 3.1:-59761213 | MS.gene30775:intron |
| GGGGACAAACACAAGTGAAT+AGG | 0.464095 | 3.1:+59762610 | None:intergenic |
| TGCTCAAACTTTATCTTCGA+AGG | 0.464527 | 3.1:-59764233 | MS.gene30775:CDS |
| CTGTGCAACATGTGCCTAAA+GGG | 0.466513 | 3.1:-59763345 | MS.gene30775:CDS |
| CATTAATGAAGCTGGAGTAT+TGG | 0.474560 | 3.1:-59761205 | MS.gene30775:CDS |
| ATAGATACCTCAGTCCCTTT+AGG | 0.485587 | 3.1:+59763331 | None:intergenic |
| TTGAGTTGGAACACAAACAT+AGG | 0.489336 | 3.1:+59764652 | None:intergenic |
| TTGTTTCCATTATCAATCAC+AGG | 0.492390 | 3.1:-59763509 | MS.gene30775:intron |
| GGCTTGCAATATTATACTTG+TGG | 0.493062 | 3.1:-59760288 | MS.gene30775:CDS |
| CCTTAGTATATCCACTGCCT+TGG | 0.497065 | 3.1:+59759760 | None:intergenic |
| GAACACAAACATAGGGCTCT+TGG | 0.499515 | 3.1:+59764660 | None:intergenic |
| TTTGTAAGAGGCTTCTGCAC+GGG | 0.511710 | 3.1:+59759679 | None:intergenic |
| GATCATTCCAAGCACTGCTA+TGG | 0.511797 | 3.1:-59763945 | MS.gene30775:CDS |
| TCTTAACTCACTGTCACAAA+TGG | 0.513188 | 3.1:+59763557 | None:intergenic |
| GTATTGCGGAACACCATGTC+AGG | 0.515490 | 3.1:-59764564 | MS.gene30775:intron |
| GCGTTTCAATGCCAAGAATG+TGG | 0.517194 | 3.1:-59762208 | MS.gene30775:CDS |
| TGTCAAGTTGTTTGGTATTG+CGG | 0.517303 | 3.1:-59764578 | MS.gene30775:CDS |
| TAAATCATTGACCAAGGCAG+TGG | 0.519906 | 3.1:-59759771 | MS.gene30775:CDS |
| AAGCACTGTGACTCGACAAA+AGG | 0.521126 | 3.1:-59762649 | MS.gene30775:CDS |
| TTGTCCCCTCTGTTCTAAAG+TGG | 0.523368 | 3.1:-59762595 | MS.gene30775:intron |
| GAAGGAACTATTGATGATGT+TGG | 0.529169 | 3.1:-59759708 | MS.gene30775:CDS |
| CCAAGGCAGTGGATATACTA+AGG | 0.529257 | 3.1:-59759760 | MS.gene30775:CDS |
| GCATCAAATTGATCGAGAAA+GGG | 0.531480 | 3.1:+59761859 | None:intergenic |
| ATAAGTTATATAGAGACAGC+TGG | 0.532422 | 3.1:-59762672 | MS.gene30775:CDS |
| AGGATACTGCCACTAGAAGA+AGG | 0.532430 | 3.1:+59762112 | None:intergenic |
| AAGTACCACTTTAGAACAGA+GGG | 0.532968 | 3.1:+59762590 | None:intergenic |
| TGAGTTGGAACACAAACATA+GGG | 0.536392 | 3.1:+59764653 | None:intergenic |
| TGACATCAAAGAGGAGCAGC+TGG | 0.537970 | 3.1:-59763796 | MS.gene30775:CDS |
| CTGCCTACCCAATTCAGTGT+TGG | 0.538934 | 3.1:-59763398 | MS.gene30775:CDS |
| TAATATTGCAAGCCAAGCAA+AGG | 0.544619 | 3.1:+59760297 | None:intergenic |
| GCTTCTAAGCCTTCTTCTAG+TGG | 0.547425 | 3.1:-59762121 | MS.gene30775:CDS |
| CGTTTCAATGCCAAGAATGT+GGG | 0.549729 | 3.1:-59762207 | MS.gene30775:CDS |
| AAGTTTGAGCATCAACCGTA+TGG | 0.550663 | 3.1:+59764245 | None:intergenic |
| TAGTTGTCCATAGCAGTGCT+TGG | 0.554117 | 3.1:+59763938 | None:intergenic |
| TATGGACAACTACAAGTTAG+TGG | 0.554822 | 3.1:-59763927 | MS.gene30775:CDS |
| GACAGTGAGTTAAGACCTCT+GGG | 0.564404 | 3.1:-59763549 | MS.gene30775:CDS |
| TGATTGATAATGGAAACAAC+AGG | 0.566394 | 3.1:+59763513 | None:intergenic |
| CATACTTTGATAGATTGGTA+TGG | 0.571289 | 3.1:+59761154 | None:intergenic |
| TTGAGCATCAACCGTATGGA+TGG | 0.572598 | 3.1:+59764249 | None:intergenic |
| TTGTACACTTAATACTGCAA+TGG | 0.575595 | 3.1:-59763749 | MS.gene30775:CDS |
| TTGAATGTCAAGCACTCTCA+AGG | 0.577097 | 3.1:-59764302 | MS.gene30775:CDS |
| AATATTGCAAGCCAAGCAAA+GGG | 0.578542 | 3.1:+59760298 | None:intergenic |
| GCTGTGCAACATGTGCCTAA+AGG | 0.597001 | 3.1:-59763346 | MS.gene30775:CDS |
| GCTGGTGTTGTATGCACAGA+TGG | 0.598430 | 3.1:-59763778 | MS.gene30775:CDS |
| TTTAGGTCATACCAGTTGTG+CGG | 0.607337 | 3.1:+59762381 | None:intergenic |
| GACAACGTGAGCATTTGCTA+AGG | 0.614070 | 3.1:+59764597 | None:intergenic |
| AAGGAAATTGCAAGATGACA+AGG | 0.615659 | 3.1:-59764214 | MS.gene30775:intron |
| TACAAAGACTCCATTAGTGA+AGG | 0.622523 | 3.1:-59759726 | MS.gene30775:CDS |
| ATGTGGGTTAGTAAGAGACA+AGG | 0.627932 | 3.1:-59762191 | MS.gene30775:CDS |
| CAATTTGATGCAAACACGAG+AGG | 0.630016 | 3.1:-59761847 | MS.gene30775:CDS |
| ATTTGTAAGAGGCTTCTGCA+CGG | 0.631187 | 3.1:+59759678 | None:intergenic |
| AATCTGTTACACCATCCATA+CGG | 0.635943 | 3.1:-59764260 | MS.gene30775:CDS |
| AAACCAACACTGAATTGGGT+AGG | 0.637837 | 3.1:+59763395 | None:intergenic |
| AAAGGATACAAAACCTGACA+TGG | 0.639706 | 3.1:+59764551 | None:intergenic |
| AGCTATTAAATCATTGACCA+AGG | 0.641241 | 3.1:-59759777 | MS.gene30775:CDS |
| GATATACTAAGGATTACTCA+TGG | 0.643148 | 3.1:-59759749 | MS.gene30775:CDS |
| GGAACTATTGATGATGTTGG+AGG | 0.643675 | 3.1:-59759705 | MS.gene30775:CDS |
| AGACATGTCTGACATCAAAG+AGG | 0.653286 | 3.1:-59763805 | MS.gene30775:CDS |
| ACATGTGCCTAAAGGGACTG+AGG | 0.674349 | 3.1:-59763338 | MS.gene30775:intron |
| ATGATATTCAGAAATCGGAG+TGG | 0.685347 | 3.1:-59764338 | MS.gene30775:intron |
| TAAGTACCACTTTAGAACAG+AGG | 0.686937 | 3.1:+59762589 | None:intergenic |
| TAGGTATCTTGGAGACACAG+AGG | 0.736759 | 3.1:-59759801 | MS.gene30775:CDS |
| GGATACAATCCTGTTCCCAG+AGG | 0.760315 | 3.1:+59763534 | None:intergenic |
| AGTACCACTTTAGAACAGAG+GGG | 0.783095 | 3.1:+59762591 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATTTAAAACTATTTGA+CGG | - | chr3.1:59761761-59761780 | MS.gene30775:intron | 10.0% |
| !!! | TTTTGTTTTTAAATTATAGA+TGG | - | chr3.1:59762302-59762321 | MS.gene30775:intron | 10.0% |
| !! | AAAATCAATTATTGCATAAA+TGG | + | chr3.1:59763264-59763283 | None:intergenic | 15.0% |
| !! | AAATCAATTATTGCATAAAT+GGG | + | chr3.1:59763263-59763282 | None:intergenic | 15.0% |
| !! | ACTGAGATAAAAAAAATAAA+TGG | - | chr3.1:59762252-59762271 | MS.gene30775:intron | 15.0% |
| !! | TATACTAATGAATAGATATA+CGG | - | chr3.1:59762938-59762957 | MS.gene30775:intron | 15.0% |
| !!! | TATATCAACTAATTTAAGAT+TGG | + | chr3.1:59760867-59760886 | None:intergenic | 15.0% |
| !!! | TCAGTCTTATATTTATAAAA+AGG | + | chr3.1:59762237-59762256 | None:intergenic | 15.0% |
| !!! | TGTCATTTAAAGATTATTAA+TGG | - | chr3.1:59761299-59761318 | MS.gene30775:intron | 15.0% |
| !! | AAATACAGTAAAGCTTAAAA+AGG | + | chr3.1:59760655-59760674 | None:intergenic | 20.0% |
| !! | ACACATACATATATAGAAAA+GGG | + | chr3.1:59763129-59763148 | None:intergenic | 20.0% |
| !! | CATAGTAATTTCAGTAAAAT+TGG | - | chr3.1:59762013-59762032 | MS.gene30775:intron | 20.0% |
| !! | CTTATATTTATAAAAAGGAG+AGG | + | chr3.1:59762232-59762251 | None:intergenic | 20.0% |
| !! | GATTCAATGTAAATTATTGA+AGG | + | chr3.1:59763866-59763885 | None:intergenic | 20.0% |
| !! | TAAAATTGGAATGTTATCAT+TGG | - | chr3.1:59762027-59762046 | MS.gene30775:intron | 20.0% |
| !! | TATGATATGATATGTTATTG+TGG | - | chr3.1:59760168-59760187 | MS.gene30775:intron | 20.0% |
| !! | TATTACTATTGATAAATTGC+TGG | + | chr3.1:59764588-59764607 | None:intergenic | 20.0% |
| !! | TGATAATCTACATATAGTTA+AGG | + | chr3.1:59762604-59762623 | None:intergenic | 20.0% |
| !!! | AATCTGAAATATTTTCTTGT+TGG | - | chr3.1:59761982-59762001 | MS.gene30775:intron | 20.0% |
| !!! | AATGAATGATGTTTTTACTT+TGG | - | chr3.1:59759825-59759844 | MS.gene30775:intron | 20.0% |
| !!! | ACACAGAATTATATTTTTAG+GGG | - | chr3.1:59763722-59763741 | MS.gene30775:CDS | 20.0% |
| !!! | ATCTCTTTAATATTGATTTC+AGG | + | chr3.1:59760814-59760833 | None:intergenic | 20.0% |
| !!! | ATGTGAACAAAATTTAGTTT+TGG | - | chr3.1:59760349-59760368 | MS.gene30775:intron | 20.0% |
| !!! | ATTTTAGCAAAAATCATGTA+AGG | - | chr3.1:59763574-59763593 | MS.gene30775:CDS | 20.0% |
| !!! | CACACAGAATTATATTTTTA+GGG | - | chr3.1:59763721-59763740 | MS.gene30775:CDS | 20.0% |
| !!! | GTATAGTAAGACATTATTTT+CGG | + | chr3.1:59761078-59761097 | None:intergenic | 20.0% |
| !!! | TCACACAGAATTATATTTTT+AGG | - | chr3.1:59763720-59763739 | MS.gene30775:CDS | 20.0% |
| !!! | TCTTAAATTTGTTTCATAGA+TGG | - | chr3.1:59764006-59764025 | MS.gene30775:intron | 20.0% |
| !!! | TTATCTTAAAGTTCTTTTTG+AGG | - | chr3.1:59760465-59760484 | MS.gene30775:intron | 20.0% |
| !!! | TTTCTCGATCATTTTATATA+TGG | + | chr3.1:59762638-59762657 | None:intergenic | 20.0% |
| !!! | TTTTCTTTCTTATCCTTTAA+TGG | - | chr3.1:59762521-59762540 | MS.gene30775:intron | 20.0% |
| !!! | TTTTGATGATATTCAGAAAT+CGG | - | chr3.1:59760194-59760213 | MS.gene30775:intron | 20.0% |
| !!! | TTTTGTAAAAGTTTCAGTTA+GGG | - | chr3.1:59761700-59761719 | MS.gene30775:intron | 20.0% |
| !!! | TTTTTGTAAAAGTTTCAGTT+AGG | - | chr3.1:59761699-59761718 | MS.gene30775:intron | 20.0% |
| ! | AAAAAAGATTGGAATGCAAA+AGG | + | chr3.1:59762505-59762524 | None:intergenic | 25.0% |
| ! | AAATCAATTTCCTTTGAACA+TGG | + | chr3.1:59762556-59762575 | None:intergenic | 25.0% |
| ! | ACATTGACACTTATGATAAA+AGG | + | chr3.1:59760061-59760080 | None:intergenic | 25.0% |
| ! | ACTTCATAAAATTGCATTTG+AGG | - | chr3.1:59760437-59760456 | MS.gene30775:intron | 25.0% |
| ! | AGATTAAATCCACAATGAAA+AGG | - | chr3.1:59763617-59763636 | MS.gene30775:intron | 25.0% |
| ! | ATACTACAAGATGACTAAAT+TGG | + | chr3.1:59764075-59764094 | None:intergenic | 25.0% |
| ! | CACACATACATATATAGAAA+AGG | + | chr3.1:59763130-59763149 | None:intergenic | 25.0% |
| ! | CATAATCATAAATTCATGTC+TGG | + | chr3.1:59763983-59764002 | None:intergenic | 25.0% |
| ! | CCATATTGTTTCATAATTGT+AGG | - | chr3.1:59761359-59761378 | MS.gene30775:intron | 25.0% |
| ! | CCTACAATTATGAAACAATA+TGG | + | chr3.1:59761362-59761381 | None:intergenic | 25.0% |
| ! | CTTCATAAAATTGCATTTGA+GGG | - | chr3.1:59760438-59760457 | MS.gene30775:intron | 25.0% |
| ! | GAGTTTAATGATCTTGATAT+AGG | - | chr3.1:59764717-59764736 | MS.gene30775:intron | 25.0% |
| ! | GGAACAAAAAATAAGTTAAG+TGG | + | chr3.1:59761057-59761076 | None:intergenic | 25.0% |
| ! | GGATAAGAAAGAAAAAAGAT+TGG | + | chr3.1:59762516-59762535 | None:intergenic | 25.0% |
| ! | TAATGAATAGATATACGGAT+TGG | - | chr3.1:59762943-59762962 | MS.gene30775:intron | 25.0% |
| ! | TACTACAAGATGACTAAATT+GGG | + | chr3.1:59764074-59764093 | None:intergenic | 25.0% |
| ! | TGTGTTTAATCAATCAAAAG+TGG | - | chr3.1:59763894-59763913 | MS.gene30775:intron | 25.0% |
| ! | TTCTATATATCTACAAGCAT+AGG | - | chr3.1:59761445-59761464 | MS.gene30775:intron | 25.0% |
| !! | AAGATTATGATGTTCCTTTT+AGG | + | chr3.1:59762176-59762195 | None:intergenic | 25.0% |
| !! | AATACATTGATGGTAAGTTT+CGG | + | chr3.1:59764143-59764162 | None:intergenic | 25.0% |
| !! | ATAACTCTTCTTTTTCTACT+AGG | + | chr3.1:59764683-59764702 | None:intergenic | 25.0% |
| !! | ATTTAAAACTATTTGACGGA+TGG | - | chr3.1:59761765-59761784 | MS.gene30775:intron | 25.0% |
| !! | ATTTTTACTACCATCTTAGT+CGG | - | chr3.1:59763930-59763949 | MS.gene30775:CDS | 25.0% |
| !! | GCATAACTTTCCATAATTTT+TGG | + | chr3.1:59763961-59763980 | None:intergenic | 25.0% |
| !! | TTTCTTATCATAAGTGTTGT+CGG | - | chr3.1:59760006-59760025 | MS.gene30775:intron | 25.0% |
| !!! | AACTCTGTTTTGTTTACATA+CGG | + | chr3.1:59764612-59764631 | None:intergenic | 25.0% |
| !!! | ACAGAATTATATTTTTAGGG+GGG | - | chr3.1:59763724-59763743 | MS.gene30775:CDS | 25.0% |
| !!! | ACTTTTGATTGATTAAACAC+AGG | + | chr3.1:59763895-59763914 | None:intergenic | 25.0% |
| !!! | CACAGAATTATATTTTTAGG+GGG | - | chr3.1:59763723-59763742 | MS.gene30775:CDS | 25.0% |
| !!! | GATTGGTTTATATTCTACTT+TGG | - | chr3.1:59762960-59762979 | MS.gene30775:intron | 25.0% |
| !!! | TCAGTTAAGTTAGTTTTGAA+GGG | - | chr3.1:59762055-59762074 | MS.gene30775:intron | 25.0% |
| !!! | TTCAGTTAAGTTAGTTTTGA+AGG | - | chr3.1:59762054-59762073 | MS.gene30775:intron | 25.0% |
| !!! | TTTAGTTTTGGTTAATGCAT+TGG | - | chr3.1:59760361-59760380 | MS.gene30775:intron | 25.0% |
| !!! | TTTTGATGACAATTTGTAAG+AGG | + | chr3.1:59764873-59764892 | None:intergenic | 25.0% |
| AAACTTCTCCAATACATTGA+TGG | + | chr3.1:59764153-59764172 | None:intergenic | 30.0% | |
| AACGAACTGAATATTGCAAA+TGG | + | chr3.1:59761261-59761280 | None:intergenic | 30.0% | |
| AAGTTCATATCAATCATCCA+TGG | + | chr3.1:59760531-59760550 | None:intergenic | 30.0% | |
| AATCCACAATGAAAAGGTTA+AGG | - | chr3.1:59763623-59763642 | MS.gene30775:intron | 30.0% | |
| ACACACAAATGTAATATGCA+GGG | + | chr3.1:59764381-59764400 | None:intergenic | 30.0% | |
| AGCAAGTATTAAACTTGATG+TGG | + | chr3.1:59761819-59761838 | None:intergenic | 30.0% | |
| AGCTATTAAATCATTGACCA+AGG | - | chr3.1:59764760-59764779 | MS.gene30775:intron | 30.0% | |
| ATAAGTTATATAGAGACAGC+TGG | - | chr3.1:59761865-59761884 | MS.gene30775:CDS | 30.0% | |
| ATACTTGTGGAAAACTTGAA+TGG | - | chr3.1:59764262-59764281 | MS.gene30775:CDS | 30.0% | |
| ATATCAAATGCGCTACTTAA+CGG | + | chr3.1:59762914-59762933 | None:intergenic | 30.0% | |
| ATCAATAGTTCCTTCACTAA+TGG | + | chr3.1:59764824-59764843 | None:intergenic | 30.0% | |
| ATGCAAAAGGAAAATTGTCA+AGG | + | chr3.1:59762492-59762511 | None:intergenic | 30.0% | |
| ATGGAAACTCAGCAAAATTT+AGG | - | chr3.1:59761318-59761337 | MS.gene30775:intron | 30.0% | |
| ATGTGTAATGATGAAAACTG+AGG | + | chr3.1:59763010-59763029 | None:intergenic | 30.0% | |
| ATTCAGTTCGTTTGTTTACA+GGG | - | chr3.1:59761269-59761288 | MS.gene30775:intron | 30.0% | |
| CAAAATTTAGGCATAGTGTT+AGG | - | chr3.1:59761330-59761349 | MS.gene30775:intron | 30.0% | |
| CATACATATATAGAAAAGGG+TGG | + | chr3.1:59763126-59763145 | None:intergenic | 30.0% | |
| CATACTTTGATAGATTGGTA+TGG | + | chr3.1:59763386-59763405 | None:intergenic | 30.0% | |
| CATCATTCATTCTATAGCAT+TGG | + | chr3.1:59759816-59759835 | None:intergenic | 30.0% | |
| CTACTAATAATGCATCTATG+AGG | - | chr3.1:59764338-59764357 | MS.gene30775:intron | 30.0% | |
| GAAACTTACCATCAATGTAT+TGG | - | chr3.1:59764142-59764161 | MS.gene30775:intron | 30.0% | |
| GACAACACTTATGATAAGAA+AGG | + | chr3.1:59760007-59760026 | None:intergenic | 30.0% | |
| GATATACTAAGGATTACTCA+TGG | - | chr3.1:59764788-59764807 | MS.gene30775:intron | 30.0% | |
| GTTCTAGTCAGAAATGTTAA+AGG | + | chr3.1:59762448-59762467 | None:intergenic | 30.0% | |
| GTTTCAAATCGTTACATCAA+AGG | - | chr3.1:59763212-59763231 | MS.gene30775:intron | 30.0% | |
| TAGCATTTGTATGCCAATTT+CGG | - | chr3.1:59761650-59761669 | MS.gene30775:intron | 30.0% | |
| TATTCAGTTCGTTTGTTTAC+AGG | - | chr3.1:59761268-59761287 | MS.gene30775:intron | 30.0% | |
| TCAAAAACCAACACTGAATT+GGG | + | chr3.1:59761149-59761168 | None:intergenic | 30.0% | |
| TGATCTTGATATAGGTATCT+TGG | - | chr3.1:59764725-59764744 | MS.gene30775:intron | 30.0% | |
| TGCAAAAATGAAACATGTGA+TGG | - | chr3.1:59762124-59762143 | MS.gene30775:CDS | 30.0% | |
| TTAACATTTCTGACTAGAAC+TGG | - | chr3.1:59762448-59762467 | MS.gene30775:CDS | 30.0% | |
| TTCAAAAACCAACACTGAAT+TGG | + | chr3.1:59761150-59761169 | None:intergenic | 30.0% | |
| TTGTACACTTAATACTGCAA+TGG | - | chr3.1:59760788-59760807 | MS.gene30775:intron | 30.0% | |
| TTGTTTCCATTATCAATCAC+AGG | - | chr3.1:59761028-59761047 | MS.gene30775:intron | 30.0% | |
| TTTCAAATTCAAAGAAACCC+TGG | + | chr3.1:59761402-59761421 | None:intergenic | 30.0% | |
| TTTGTGTTCCAACTCAAAAA+AGG | - | chr3.1:59759891-59759910 | MS.gene30775:intron | 30.0% | |
| ! | AGTTTTCCACAAATTTGTAG+AGG | + | chr3.1:59761622-59761641 | None:intergenic | 30.0% |
| ! | ATTTTCCATTGTGAATTCCA+GGG | - | chr3.1:59761382-59761401 | MS.gene30775:intron | 30.0% |
| ! | GGAACATCATAATCTTTTAC+TGG | - | chr3.1:59762180-59762199 | MS.gene30775:CDS | 30.0% |
| ! | GTGTAACAGATTTTCTCTTA+TGG | + | chr3.1:59760269-59760288 | None:intergenic | 30.0% |
| ! | TAGAAAGCTTTTTACAACCA+TGG | - | chr3.1:59760511-59760530 | MS.gene30775:intron | 30.0% |
| ! | TAGTTAAGGATTTGACTTCA+TGG | + | chr3.1:59762590-59762609 | None:intergenic | 30.0% |
| ! | TGATGTATTTGAAACGTTCT+GGG | + | chr3.1:59763675-59763694 | None:intergenic | 30.0% |
| ! | TTTTTACTACCATCTTAGTC+GGG | - | chr3.1:59763931-59763950 | MS.gene30775:CDS | 30.0% |
| !! | AATCATGTAAGGTATTGTTG+TGG | - | chr3.1:59763585-59763604 | MS.gene30775:intron | 30.0% |
| !! | TGATTGATAATGGAAACAAC+AGG | + | chr3.1:59761027-59761046 | None:intergenic | 30.0% |
| !!! | AATTCAGTGTTGGTTTTTGA+AGG | - | chr3.1:59761149-59761168 | MS.gene30775:intron | 30.0% |
| !!! | GATTGCAGAATTTTTTTCCA+AGG | - | chr3.1:59760831-59760850 | MS.gene30775:intron | 30.0% |
| AAAGGATACAAAACCTGACA+TGG | + | chr3.1:59759989-59760008 | None:intergenic | 35.0% | |
| AAAGGTTAAGGTTGCAAGTT+AGG | - | chr3.1:59763635-59763654 | MS.gene30775:intron | 35.0% | |
| AAGATATCTCCACTTTGAAC+TGG | - | chr3.1:59761520-59761539 | MS.gene30775:intron | 35.0% | |
| AAGGAAATTGCAAGATGACA+AGG | - | chr3.1:59760323-59760342 | MS.gene30775:intron | 35.0% | |
| AATATTGCAAGCCAAGCAAA+GGG | + | chr3.1:59764242-59764261 | None:intergenic | 35.0% | |
| AATCTCAAAGGAGTTGTACT+AGG | + | chr3.1:59762828-59762847 | None:intergenic | 35.0% | |
| AATCTGTTACACCATCCATA+CGG | - | chr3.1:59760277-59760296 | MS.gene30775:CDS | 35.0% | |
| ACATGCATCACATTCAAACA+AGG | - | chr3.1:59764424-59764443 | MS.gene30775:intron | 35.0% | |
| AGATATCTCCACTTTGAACT+GGG | - | chr3.1:59761521-59761540 | MS.gene30775:intron | 35.0% | |
| AGCTTCATTAATGACTGCAA+AGG | + | chr3.1:59763325-59763344 | None:intergenic | 35.0% | |
| ATAAACAGATGGAGGAATGA+TGG | - | chr3.1:59763752-59763771 | MS.gene30775:CDS | 35.0% | |
| ATAGTAGATAGAGAACTGCA+AGG | + | chr3.1:59762737-59762756 | None:intergenic | 35.0% | |
| ATGATATTCAGAAATCGGAG+TGG | - | chr3.1:59760199-59760218 | MS.gene30775:intron | 35.0% | |
| ATTCTGCCTCTACAAATTTG+TGG | - | chr3.1:59761613-59761632 | MS.gene30775:intron | 35.0% | |
| CACAATGAATAGCTATTCAG+AGG | + | chr3.1:59764111-59764130 | None:intergenic | 35.0% | |
| CACACAAATGTAATATGCAG+GGG | + | chr3.1:59764380-59764399 | None:intergenic | 35.0% | |
| CACACACAAATGTAATATGC+AGG | + | chr3.1:59764382-59764401 | None:intergenic | 35.0% | |
| CACCACATACATGTTGAAAA+CGG | + | chr3.1:59760682-59760701 | None:intergenic | 35.0% | |
| CATAAGTGTCAATGTTACCA+GGG | - | chr3.1:59760066-59760085 | MS.gene30775:intron | 35.0% | |
| CATTAATGAAGCTGGAGTAT+TGG | - | chr3.1:59763332-59763351 | MS.gene30775:intron | 35.0% | |
| CGAGAAAATGCAATTCTAGA+AGG | - | chr3.1:59762094-59762113 | MS.gene30775:intron | 35.0% | |
| CTACTTAACGGCAAAAGATT+TGG | + | chr3.1:59762902-59762921 | None:intergenic | 35.0% | |
| GAAAACTGAGGAAATATGAC+CGG | + | chr3.1:59762998-59763017 | None:intergenic | 35.0% | |
| GACTGCAAAGGTAAAATATC+AGG | + | chr3.1:59763313-59763332 | None:intergenic | 35.0% | |
| GATGGCATACTTTGATAGAT+TGG | + | chr3.1:59763391-59763410 | None:intergenic | 35.0% | |
| GCATCAAATTGATCGAGAAA+GGG | + | chr3.1:59762681-59762700 | None:intergenic | 35.0% | |
| GGCTTGCAATATTATACTTG+TGG | - | chr3.1:59764249-59764268 | MS.gene30775:CDS | 35.0% | |
| TAAACAGATGGAGGAATGAT+GGG | - | chr3.1:59763753-59763772 | MS.gene30775:CDS | 35.0% | |
| TAATATTGCAAGCCAAGCAA+AGG | + | chr3.1:59764243-59764262 | None:intergenic | 35.0% | |
| TACAAAGACTCCATTAGTGA+AGG | - | chr3.1:59764811-59764830 | MS.gene30775:intron | 35.0% | |
| TAGGTAAAACATGCATGGAA+AGG | + | chr3.1:59762809-59762828 | None:intergenic | 35.0% | |
| TATGGACAACTACAAGTTAG+TGG | - | chr3.1:59760610-59760629 | MS.gene30775:intron | 35.0% | |
| TCATAAGTGTCAATGTTACC+AGG | - | chr3.1:59760065-59760084 | MS.gene30775:intron | 35.0% | |
| TCTATCATTGTTACATTCCC+TGG | + | chr3.1:59760086-59760105 | None:intergenic | 35.0% | |
| TCTTAACTCACTGTCACAAA+TGG | + | chr3.1:59760983-59761002 | None:intergenic | 35.0% | |
| TGACAACTATCATCACCTAT+TGG | + | chr3.1:59761738-59761757 | None:intergenic | 35.0% | |
| TGCATCAAATTGATCGAGAA+AGG | + | chr3.1:59762682-59762701 | None:intergenic | 35.0% | |
| TGCTCAAACTTTATCTTCGA+AGG | - | chr3.1:59760304-59760323 | MS.gene30775:CDS | 35.0% | |
| TGGTTACCTGTGATTGATAA+TGG | + | chr3.1:59761037-59761056 | None:intergenic | 35.0% | |
| TGTACTAGGTAAAACATGCA+TGG | + | chr3.1:59762814-59762833 | None:intergenic | 35.0% | |
| TTCCACTTATATCCTCAAAG+AGG | + | chr3.1:59761573-59761592 | None:intergenic | 35.0% | |
| TTGAGTATAGAAGTTTGCGA+TGG | + | chr3.1:59763409-59763428 | None:intergenic | 35.0% | |
| TTGCACTATACGAATCTCAA+AGG | + | chr3.1:59762840-59762859 | None:intergenic | 35.0% | |
| TTTCCTTTGAACATGGATCA+AGG | + | chr3.1:59762549-59762568 | None:intergenic | 35.0% | |
| TTTGCAGTCATTAATGAAGC+TGG | - | chr3.1:59763324-59763343 | MS.gene30775:intron | 35.0% | |
| ! | AGATTGGAAGCATAAAACCT+TGG | + | chr3.1:59760851-59760870 | None:intergenic | 35.0% |
| ! | CAACCTTAACCTTTTCATTG+TGG | + | chr3.1:59763629-59763648 | None:intergenic | 35.0% |
| ! | CTGATGTATTTGAAACGTTC+TGG | + | chr3.1:59763676-59763695 | None:intergenic | 35.0% |
| ! | CTTTTTCTACTAGGTGACAT+TGG | + | chr3.1:59764674-59764693 | None:intergenic | 35.0% |
| ! | GATTTTCCATTGTGAATTCC+AGG | - | chr3.1:59761381-59761400 | MS.gene30775:intron | 35.0% |
| ! | GTAACAATGATAGAAGCACA+AGG | - | chr3.1:59760092-59760111 | MS.gene30775:intron | 35.0% |
| ! | TGAGTTGGAACACAAACATA+GGG | + | chr3.1:59759887-59759906 | None:intergenic | 35.0% |
| ! | TGGATGTTTTACTTCATTGC+AGG | - | chr3.1:59764198-59764217 | MS.gene30775:intron | 35.0% |
| ! | TGTCAAGTTGTTTGGTATTG+CGG | - | chr3.1:59759959-59759978 | MS.gene30775:intron | 35.0% |
| !! | AAAAGAGTGTCAGTAACACT+TGG | + | chr3.1:59762282-59762301 | None:intergenic | 35.0% |
| !! | AAGTACCACTTTAGAACAGA+GGG | + | chr3.1:59761950-59761969 | None:intergenic | 35.0% |
| !! | CTATGAGTTTTGTAGTCTGA+TGG | - | chr3.1:59762203-59762222 | MS.gene30775:CDS | 35.0% |
| !! | GAAGGAACTATTGATGATGT+TGG | - | chr3.1:59764829-59764848 | MS.gene30775:intron | 35.0% |
| !! | TAAGTACCACTTTAGAACAG+AGG | + | chr3.1:59761951-59761970 | None:intergenic | 35.0% |
| !! | TTCATTTTTCTAATGCGACC+AGG | + | chr3.1:59763546-59763565 | None:intergenic | 35.0% |
| !! | TTGAGTTGGAACACAAACAT+AGG | + | chr3.1:59759888-59759907 | None:intergenic | 35.0% |
| !!! | AGTGTTGGTTTTTGAAGGAA+GGG | - | chr3.1:59761154-59761173 | MS.gene30775:intron | 35.0% |
| !!! | TTGCTAGTTTTGCTTTTTCC+TGG | - | chr3.1:59763525-59763544 | MS.gene30775:CDS | 35.0% |
| AAACCAACACTGAATTGGGT+AGG | + | chr3.1:59761145-59761164 | None:intergenic | 40.0% | |
| AAGTTTGAGCATCAACCGTA+TGG | + | chr3.1:59760295-59760314 | None:intergenic | 40.0% | |
| AGAAACCCTGGAATTCACAA+TGG | + | chr3.1:59761390-59761409 | None:intergenic | 40.0% | |
| AGACATGTCTGACATCAAAG+AGG | - | chr3.1:59760732-59760751 | MS.gene30775:intron | 40.0% | |
| AGTTTCCACCATCTCAGAAA+AGG | - | chr3.1:59759699-59759718 | MS.gene30775:CDS | 40.0% | |
| ATAGATACCTCAGTCCCTTT+AGG | + | chr3.1:59761209-59761228 | None:intergenic | 40.0% | |
| ATGGATCAAGGCTCCATTAA+AGG | + | chr3.1:59762537-59762556 | None:intergenic | 40.0% | |
| ATTTGTAAGAGGCTTCTGCA+CGG | + | chr3.1:59764862-59764881 | None:intergenic | 40.0% | |
| CAATTTGATGCAAACACGAG+AGG | - | chr3.1:59762690-59762709 | MS.gene30775:intron | 40.0% | |
| CACAACTGGTATGACCTAAA+AGG | - | chr3.1:59762159-59762178 | MS.gene30775:CDS | 40.0% | |
| CCATCACAACTAGCTAAGAA+AGG | + | chr3.1:59764496-59764515 | None:intergenic | 40.0% | |
| CCTTTCTTAGCTAGTTGTGA+TGG | - | chr3.1:59764493-59764512 | MS.gene30775:intron | 40.0% | |
| CGTTTCAATGCCAAGAATGT+GGG | - | chr3.1:59762330-59762349 | MS.gene30775:intron | 40.0% | |
| CTCTTACTAACCCACATTCT+TGG | + | chr3.1:59762343-59762362 | None:intergenic | 40.0% | |
| GCAACAACTGAAACTACCAA+CGG | + | chr3.1:59763468-59763487 | None:intergenic | 40.0% | |
| GGGAAAGAATAAACAGATGG+AGG | - | chr3.1:59763744-59763763 | MS.gene30775:CDS | 40.0% | |
| GGGTACATCTCATATCCAAT+AGG | - | chr3.1:59761720-59761739 | MS.gene30775:intron | 40.0% | |
| GTTTCCACCATCTCAGAAAA+GGG | - | chr3.1:59759700-59759719 | MS.gene30775:CDS | 40.0% | |
| TAAATCATTGACCAAGGCAG+TGG | - | chr3.1:59764766-59764785 | MS.gene30775:intron | 40.0% | |
| TACCAACGGAATCAATGCTA+CGG | + | chr3.1:59763454-59763473 | None:intergenic | 40.0% | |
| TGATGTCAGACATGTCTTGA+TGG | + | chr3.1:59760729-59760748 | None:intergenic | 40.0% | |
| TTGAATGTCAAGCACTCTCA+AGG | - | chr3.1:59760235-59760254 | MS.gene30775:intron | 40.0% | |
| TTTAGGTCATACCAGTTGTG+CGG | + | chr3.1:59762159-59762178 | None:intergenic | 40.0% | |
| ! | AAGTTGCAACTGCCTAGTTT+TGG | + | chr3.1:59761676-59761695 | None:intergenic | 40.0% |
| ! | ACTAGGTGACATTGGTTACA+TGG | + | chr3.1:59764666-59764685 | None:intergenic | 40.0% |
| ! | CCAACTCAAAAAAGGTGTGA+TGG | - | chr3.1:59759899-59759918 | MS.gene30775:intron | 40.0% |
| ! | CTCCGTTTTCAACATGTATG+TGG | - | chr3.1:59760677-59760696 | MS.gene30775:intron | 40.0% |
| ! | GACCTCTTTGAGGATATAAG+TGG | - | chr3.1:59761568-59761587 | MS.gene30775:intron | 40.0% |
| !! | AGTACCACTTTAGAACAGAG+GGG | + | chr3.1:59761949-59761968 | None:intergenic | 40.0% |
| !! | ATCGTTACATCAAAGGCACT+TGG | - | chr3.1:59763219-59763238 | MS.gene30775:intron | 40.0% |
| !! | ATGTGGGTTAGTAAGAGACA+AGG | - | chr3.1:59762346-59762365 | MS.gene30775:intron | 40.0% |
| !! | CATGTAAGGTATTGTTGTGG+AGG | - | chr3.1:59763588-59763607 | MS.gene30775:intron | 40.0% |
| !! | GGAACTATTGATGATGTTGG+AGG | - | chr3.1:59764832-59764851 | MS.gene30775:intron | 40.0% |
| !! | TACTTTGGTGTTGCATTGCA+GGG | - | chr3.1:59759840-59759859 | MS.gene30775:intron | 40.0% |
| !! | TTACTTTGGTGTTGCATTGC+AGG | - | chr3.1:59759839-59759858 | MS.gene30775:intron | 40.0% |
| !! | TTTTGAAGGAAGGGTAGCAT+CGG | - | chr3.1:59761163-59761182 | MS.gene30775:CDS | 40.0% |
| !!! | CAGTGTTGGTTTTTGAAGGA+AGG | - | chr3.1:59761153-59761172 | MS.gene30775:intron | 40.0% |
| !!! | CCATCACACCTTTTTTGAGT+TGG | + | chr3.1:59759902-59759921 | None:intergenic | 40.0% |
| AAAGAGGTCCCAGTTCAAAG+TGG | + | chr3.1:59761532-59761551 | None:intergenic | 45.0% | |
| AATGCGTGACAAAGGTAGGA+AGG | + | chr3.1:59763803-59763822 | None:intergenic | 45.0% | |
| ACTACTAGAGATTTCCACCC+AGG | - | chr3.1:59759736-59759755 | MS.gene30775:CDS | 45.0% | |
| ACTTTGAACTGGGACCTCTT+TGG | - | chr3.1:59761531-59761550 | MS.gene30775:intron | 45.0% | |
| ACTTTGGATGATCCTGCAAC+CGG | - | chr3.1:59762976-59762995 | MS.gene30775:intron | 45.0% | |
| AGATGCCAAACTCACTGTAC+TGG | + | chr3.1:59763101-59763120 | None:intergenic | 45.0% | |
| AGGATACTGCCACTAGAAGA+AGG | + | chr3.1:59762428-59762447 | None:intergenic | 45.0% | |
| AGTGGAAGTCGAACTACTAG+AGG | - | chr3.1:59761586-59761605 | MS.gene30775:intron | 45.0% | |
| ATGATGCTGACATGCAATGC+TGG | - | chr3.1:59764178-59764197 | MS.gene30775:intron | 45.0% | |
| ATGCCAAACTCACTGTACTG+GGG | + | chr3.1:59763099-59763118 | None:intergenic | 45.0% | |
| ATTATAGCCGTTCCCCAAAG+AGG | + | chr3.1:59761548-59761567 | None:intergenic | 45.0% | |
| CCAAGGCAGTGGATATACTA+AGG | - | chr3.1:59764777-59764796 | MS.gene30775:intron | 45.0% | |
| CCTTAGTATATCCACTGCCT+TGG | + | chr3.1:59764780-59764799 | None:intergenic | 45.0% | |
| CGGCTATAATGACCTCTTTG+AGG | - | chr3.1:59761558-59761577 | MS.gene30775:intron | 45.0% | |
| CTGTGCAACATGTGCCTAAA+GGG | - | chr3.1:59761192-59761211 | MS.gene30775:CDS | 45.0% | |
| CTTTGAACTGGGACCTCTTT+GGG | - | chr3.1:59761532-59761551 | MS.gene30775:intron | 45.0% | |
| GAACACAAACATAGGGCTCT+TGG | + | chr3.1:59759880-59759899 | None:intergenic | 45.0% | |
| GAATTGGGTAGGCAGCTATA+TGG | + | chr3.1:59761134-59761153 | None:intergenic | 45.0% | |
| GACAGTGAGTTAAGACCTCT+GGG | - | chr3.1:59760988-59761007 | MS.gene30775:intron | 45.0% | |
| GAGAAATGCGTGACAAAGGT+AGG | + | chr3.1:59763807-59763826 | None:intergenic | 45.0% | |
| GAGCCTTGATCCATGTTCAA+AGG | - | chr3.1:59762543-59762562 | MS.gene30775:intron | 45.0% | |
| GATGCCAAACTCACTGTACT+GGG | + | chr3.1:59763100-59763119 | None:intergenic | 45.0% | |
| GCGTTTCAATGCCAAGAATG+TGG | - | chr3.1:59762329-59762348 | MS.gene30775:intron | 45.0% | |
| GCTTCTAAGCCTTCTTCTAG+TGG | - | chr3.1:59762416-59762435 | MS.gene30775:CDS | 45.0% | |
| GGGGACAAACACAAGTGAAT+AGG | + | chr3.1:59761930-59761949 | None:intergenic | 45.0% | |
| GGGGGGAAAGAATAAACAGA+TGG | - | chr3.1:59763741-59763760 | MS.gene30775:CDS | 45.0% | |
| TAGGTATCTTGGAGACACAG+AGG | - | chr3.1:59764736-59764755 | MS.gene30775:intron | 45.0% | |
| TAGTTGTCCATAGCAGTGCT+TGG | + | chr3.1:59760602-59760621 | None:intergenic | 45.0% | |
| TATCCCCAGTACAGTGAGTT+TGG | - | chr3.1:59763093-59763112 | MS.gene30775:intron | 45.0% | |
| TGACAGTGAGTTAAGACCTC+TGG | - | chr3.1:59760987-59761006 | MS.gene30775:intron | 45.0% | |
| TGCAGAGAAATGCGTGACAA+AGG | + | chr3.1:59763811-59763830 | None:intergenic | 45.0% | |
| TGCCAATTTCGGCCAAAACT+AGG | - | chr3.1:59761661-59761680 | MS.gene30775:intron | 45.0% | |
| TTGAGCATCAACCGTATGGA+TGG | + | chr3.1:59760291-59760310 | None:intergenic | 45.0% | |
| TTTGAACTGGGACCTCTTTG+GGG | - | chr3.1:59761533-59761552 | MS.gene30775:intron | 45.0% | |
| TTTGTAAGAGGCTTCTGCAC+GGG | + | chr3.1:59764861-59764880 | None:intergenic | 45.0% | |
| ! | AACACGAGAGGCGATTTTGA+AGG | - | chr3.1:59762702-59762721 | MS.gene30775:intron | 45.0% |
| ! | AAGCACTGTGACTCGACAAA+AGG | - | chr3.1:59761888-59761907 | MS.gene30775:CDS | 45.0% |
| ! | AGAGTGTCAGTAACACTTGG+TGG | + | chr3.1:59762279-59762298 | None:intergenic | 45.0% |
| ! | CAAGTTAGTGGACGCATTAG+TGG | - | chr3.1:59760622-59760641 | MS.gene30775:intron | 45.0% |
| ! | GACAACGTGAGCATTTGCTA+AGG | + | chr3.1:59759943-59759962 | None:intergenic | 45.0% |
| ! | GATAGAAGCACAAGGAGTGT+TGG | - | chr3.1:59760100-59760119 | MS.gene30775:intron | 45.0% |
| ! | GATCATTCCAAGCACTGCTA+TGG | - | chr3.1:59760592-59760611 | MS.gene30775:intron | 45.0% |
| ! | GCTCACGTTGTCAAGTTGTT+TGG | - | chr3.1:59759951-59759970 | MS.gene30775:intron | 45.0% |
| !! | ACTTTGGTGTTGCATTGCAG+GGG | - | chr3.1:59759841-59759860 | MS.gene30775:intron | 45.0% |
| !! | TTCCGTAGCATTGATTCCGT+TGG | - | chr3.1:59763449-59763468 | MS.gene30775:intron | 45.0% |
| !! | TTGTCCCCTCTGTTCTAAAG+TGG | - | chr3.1:59761942-59761961 | MS.gene30775:intron | 45.0% |
| !!! | TGCCTAGTTTTGGCCGAAAT+TGG | + | chr3.1:59761666-59761685 | None:intergenic | 45.0% |
| !!! | CTATTTTATATAATTTTTTA+AGG | - | chr3.1:59761837-59761856 | MS.gene30775:CDS | 5.0% |
| ACATGTGCCTAAAGGGACTG+AGG | - | chr3.1:59761199-59761218 | MS.gene30775:CDS | 50.0% | |
| AGAGAGAGAGAGAGAGACCT+GGG | + | chr3.1:59759756-59759775 | None:intergenic | 50.0% | |
| CTGCCTACCCAATTCAGTGT+TGG | - | chr3.1:59761139-59761158 | MS.gene30775:intron | 50.0% | |
| GAGGAAATATGACCGGTTGC+AGG | + | chr3.1:59762991-59763010 | None:intergenic | 50.0% | |
| GCGCATTACATGCAAACTGC+AGG | + | chr3.1:59760957-59760976 | None:intergenic | 50.0% | |
| GCTGTGCAACATGTGCCTAA+AGG | - | chr3.1:59761191-59761210 | MS.gene30775:CDS | 50.0% | |
| GGATACAATCCTGTTCCCAG+AGG | + | chr3.1:59761006-59761025 | None:intergenic | 50.0% | |
| GTATTGCGGAACACCATGTC+AGG | - | chr3.1:59759973-59759992 | MS.gene30775:intron | 50.0% | |
| GTCTTGTGTCCGACACATGT+TGG | + | chr3.1:59760035-59760054 | None:intergenic | 50.0% | |
| TGACATCAAAGAGGAGCAGC+TGG | - | chr3.1:59760741-59760760 | MS.gene30775:intron | 50.0% | |
| ! | GAGTTAAGACCTCTGGGAAC+AGG | - | chr3.1:59760994-59761013 | MS.gene30775:intron | 50.0% |
| !! | AGAGCGACCCTTTTCTGAGA+TGG | + | chr3.1:59759710-59759729 | None:intergenic | 50.0% |
| !! | GCTGGTGTTGTATGCACAGA+TGG | - | chr3.1:59760759-59760778 | MS.gene30775:intron | 50.0% |
| CCAAGCAAAGGGTGAACAGC+TGG | + | chr3.1:59764231-59764250 | None:intergenic | 55.0% | |
| CCAGCTGTTCACCCTTTGCT+TGG | - | chr3.1:59764228-59764247 | MS.gene30775:CDS | 55.0% | |
| GAGAGAGAGAGAGAGAGACC+TGG | + | chr3.1:59759757-59759776 | None:intergenic | 55.0% | |
| GGTTTCTTGCTCCGCACAAC+TGG | - | chr3.1:59762145-59762164 | MS.gene30775:CDS | 55.0% | |
| TGTCGGCGTCCAACATGTGT+CGG | - | chr3.1:59760023-59760042 | MS.gene30775:intron | 55.0% | |
| ! | ACTGGGACCTCTTTGGGGAA+CGG | - | chr3.1:59761538-59761557 | MS.gene30775:intron | 55.0% |
| !!! | GCGACCCTTTTCTGAGATGG+TGG | + | chr3.1:59759707-59759726 | None:intergenic | 55.0% |
| GAGAGAGAGAGAGACCTGGG+TGG | + | chr3.1:59759753-59759772 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 59759658 | 59764901 | 59759658 | ID=MS.gene30775 |
| chr3.1 | mRNA | 59759658 | 59764901 | 59759658 | ID=MS.gene30775.t1;Parent=MS.gene30775 |
| chr3.1 | exon | 59764871 | 59764901 | 59764871 | ID=MS.gene30775.t1.exon1;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59764871 | 59764901 | 59764871 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59764565 | 59764698 | 59764565 | ID=MS.gene30775.t1.exon2;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59764565 | 59764698 | 59764565 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59764215 | 59764349 | 59764215 | ID=MS.gene30775.t1.exon3;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59764215 | 59764349 | 59764215 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59763912 | 59763966 | 59763912 | ID=MS.gene30775.t1.exon4;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59763912 | 59763966 | 59763912 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59763707 | 59763825 | 59763707 | ID=MS.gene30775.t1.exon5;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59763707 | 59763825 | 59763707 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59763510 | 59763598 | 59763510 | ID=MS.gene30775.t1.exon6;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59763510 | 59763598 | 59763510 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59763339 | 59763420 | 59763339 | ID=MS.gene30775.t1.exon7;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59763339 | 59763420 | 59763339 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59762596 | 59762700 | 59762596 | ID=MS.gene30775.t1.exon8;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59762596 | 59762700 | 59762596 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59762393 | 59762483 | 59762393 | ID=MS.gene30775.t1.exon9;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59762393 | 59762483 | 59762393 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59762119 | 59762238 | 59762119 | ID=MS.gene30775.t1.exon10;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59762119 | 59762238 | 59762119 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59761836 | 59761942 | 59761836 | ID=MS.gene30775.t1.exon11;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59761836 | 59761942 | 59761836 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59761159 | 59761228 | 59761159 | ID=MS.gene30775.t1.exon12;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59761159 | 59761228 | 59761159 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59760276 | 59760339 | 59760276 | ID=MS.gene30775.t1.exon13;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59760276 | 59760339 | 59760276 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| chr3.1 | exon | 59759658 | 59759820 | 59759658 | ID=MS.gene30775.t1.exon14;Parent=MS.gene30775.t1 |
| chr3.1 | CDS | 59759658 | 59759820 | 59759658 | ID=cds.MS.gene30775.t1;Parent=MS.gene30775.t1 |
| Gene Sequence |
| Protein sequence |
