AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene30971

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30971.t1 MTR_2g097020 90.722 679 44 5 1 672 1 667 0.0 1206
MS.gene30971.t1 MTR_4g046643 80.909 660 114 4 1 655 1 653 0.0 1032
MS.gene30971.t1 MTR_2g097010 80.973 678 123 1 1 672 1 678 0.0 1029
MS.gene30971.t1 MTR_2g095400 79.794 678 90 5 1 672 1 637 0.0 1021
MS.gene30971.t1 MTR_2g097000 74.872 390 80 3 299 672 2 389 0.0 535
MS.gene30971.t1 MTR_3g067815 39.851 670 345 12 10 667 13 636 4.27e-156 465
MS.gene30971.t1 MTR_5g079940 38.496 665 359 17 21 671 492 1120 4.12e-137 430
MS.gene30971.t1 MTR_4g126200 73.764 263 53 3 414 672 3 253 2.19e-128 380
MS.gene30971.t1 MTR_4g006760 36.103 662 349 15 21 668 24 625 7.97e-119 369
MS.gene30971.t1 MTR_4g131350 36.921 669 351 16 16 671 72 682 1.78e-118 369
MS.gene30971.t1 MTR_4g125920 36.622 669 353 16 16 671 19 629 2.59e-117 365
MS.gene30971.t1 MTR_4g126180 77.391 115 26 0 300 414 3 117 4.70e-50 170
MS.gene30971.t1 MTR_3g067855 43.182 220 109 4 441 659 123 327 1.33e-45 166
MS.gene30971.t1 MTR_8g446460 56.618 136 50 3 9 138 107 239 5.82e-37 141
MS.gene30971.t1 MTR_3g067845 35.075 268 155 5 406 671 1 251 2.29e-34 132
MS.gene30971.t1 MTR_4g131310 26.115 471 249 14 16 471 19 405 1.16e-30 126
MS.gene30971.t1 MTR_4g131310 59.375 64 26 0 597 660 391 454 1.04e-17 86.7
MS.gene30971.t1 MTR_2g066850 65.882 85 24 3 2 84 66 147 7.12e-25 111
MS.gene30971.t1 MTR_2g075630 74.242 66 14 2 2 67 67 129 3.84e-24 102
MS.gene30971.t1 MTR_8g063010 61.905 63 21 2 18 80 57 116 3.30e-18 84.0
MS.gene30971.t1 MTR_3g067825 44.444 90 45 2 575 659 3 92 2.92e-16 75.9
MS.gene30971.t1 MTR_5g044360 60.000 50 18 2 25 74 76 123 3.11e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene30971.t1 AT1G13790 47.070 529 258 7 139 663 216 726 1.01e-142 434
MS.gene30971.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.57e-11 66.2
MS.gene30971.t1 AT1G13790 47.070 529 258 7 139 663 216 726 1.01e-142 434
MS.gene30971.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.57e-11 66.2
MS.gene30971.t1 AT3G12550 36.241 665 370 13 13 663 5 629 4.45e-119 369
MS.gene30971.t1 AT3G12550 36.186 666 370 14 13 663 5 630 1.78e-117 365
MS.gene30971.t1 AT3G12550 36.186 666 370 14 13 663 5 630 1.78e-117 365
MS.gene30971.t1 AT3G12550 36.186 666 370 14 13 663 5 630 1.78e-117 365
MS.gene30971.t1 AT3G48670 35.312 674 372 14 13 671 21 645 2.24e-117 365
MS.gene30971.t1 AT3G48670 35.312 674 372 14 13 671 21 645 2.24e-117 365
MS.gene30971.t1 AT3G48670 35.312 674 372 14 13 671 21 645 2.24e-117 365
MS.gene30971.t1 AT1G15910 34.269 677 364 15 16 671 18 634 5.60e-110 346
MS.gene30971.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.37e-105 332
MS.gene30971.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.37e-105 332
MS.gene30971.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.37e-105 332
MS.gene30971.t1 AT4G00380 33.183 666 364 14 15 659 18 623 8.94e-104 330
MS.gene30971.t1 AT4G00380 33.183 666 364 14 15 659 18 623 8.94e-104 330
MS.gene30971.t1 AT5G59390 36.581 544 306 10 133 661 25 544 2.10e-103 326
MS.gene30971.t1 AT5G59390 36.581 544 306 10 133 661 25 544 2.10e-103 326
MS.gene30971.t1 AT1G80790 35.451 677 356 16 15 671 19 634 5.45e-103 327
MS.gene30971.t1 AT1G80790 35.451 677 356 16 15 671 19 634 5.45e-103 327
MS.gene30971.t1 AT4G00380 36.313 537 293 9 141 659 90 595 4.95e-101 322
MS.gene30971.t1 AT4G01180 36.147 545 296 10 137 661 27 539 3.09e-97 310
MS.gene30971.t1 AT3G12550 33.618 586 335 13 16 587 8 553 8.30e-86 281
MS.gene30971.t1 AT4G01780 32.043 465 209 10 209 671 111 470 1.64e-58 205
MS.gene30971.t1 AT1G80790 31.034 464 253 13 15 458 19 435 1.38e-55 197
MS.gene30971.t1 AT3G29375 42.857 210 98 5 462 670 38 226 8.27e-42 152
MS.gene30971.t1 AT3G29375 42.857 210 98 5 462 670 161 349 1.38e-39 149
MS.gene30971.t1 AT3G29375 38.095 126 59 3 462 587 38 144 5.41e-15 73.9
MS.gene30971.t1 AT2G16490 40.000 65 39 0 596 660 74 138 7.12e-12 65.1

Find 158 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCCATTGTTTAATTAAA+TGG 0.065652 2.2:+5121765 None:intergenic
TTCCTCAGTCTTCAGCTTTA+AGG 0.090360 2.2:+5124420 None:intergenic
GGGGACTTGAAAACTGTTTC+TGG 0.148020 2.2:-5124499 MS.gene30971:CDS
ATGACTCGAGCAGTGTTCTT+TGG 0.279903 2.2:+5122458 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.283852 2.2:-5124326 MS.gene30971:CDS
TATAGTTGGCAAACACCTTC+AGG 0.289693 2.2:-5124527 MS.gene30971:CDS
GGAAAAGGAAGAGGAATTAG+AGG 0.297864 2.2:-5123272 MS.gene30971:CDS
CCCTTTGCAGTTGTTCAGTT+TGG 0.303743 2.2:-5124706 MS.gene30971:CDS
GAGGGATTACTTGGCTTTAC+GGG 0.324290 2.2:-5124614 MS.gene30971:CDS
GGCAAACACCTTCAGGGAAA+TGG 0.327163 2.2:-5124520 MS.gene30971:CDS
GAGCGGGGAGATAGACTCTT+TGG 0.328386 2.2:-5124586 MS.gene30971:CDS
CCTTGTAGTAATCATCCTTC+AGG 0.329123 2.2:+5125226 None:intergenic
AAGGCTGAAAGGAGCTTTCC+AGG 0.329972 2.2:-5123365 MS.gene30971:CDS
TCAACAAACTCTGGTTGTTC+AGG 0.333719 2.2:-5123236 MS.gene30971:CDS
ACTACCCTTTGGAACTTTAG+AGG 0.338798 2.2:-5124736 MS.gene30971:CDS
CTTCCATTGTTTAATTAAAT+GGG 0.340209 2.2:+5121766 None:intergenic
AGTCTTCAGCTTTAAGGTAT+TGG 0.341440 2.2:+5124426 None:intergenic
AATTCCAGAGTTCTGGTATT+GGG 0.344766 2.2:+5121828 None:intergenic
TGCTAAACAGGCATTGGAAT+TGG 0.345449 2.2:-5123395 MS.gene30971:CDS
TTTGATCCATCGCTTTCCTT+AGG 0.347229 2.2:+5124356 None:intergenic
TCTCTAAAATTCCAGAGTTC+TGG 0.347547 2.2:+5121821 None:intergenic
GGCTTTACGGGAGCAGGAGC+GGG 0.350376 2.2:-5124602 MS.gene30971:CDS
AAAATTGGAGGAAATCAAAA+TGG 0.350809 2.2:-5123302 MS.gene30971:CDS
GAATGATGCTGAGGGTCATT+TGG 0.358140 2.2:-5124923 MS.gene30971:CDS
ACCTGAGTCACCCACAATTC+TGG 0.361313 2.2:+5125113 None:intergenic
AAAGCTGAAGACTGAGGAAT+TGG 0.361410 2.2:-5124416 MS.gene30971:CDS
CAAAGGGTAGTAACTTTCAA+TGG 0.373028 2.2:+5124748 None:intergenic
AGAGGGATTACTTGGCTTTA+CGG 0.374808 2.2:-5124615 MS.gene30971:CDS
ATGCTTGAACATTTCAATAA+GGG 0.377132 2.2:-5124325 MS.gene30971:intron
GCAAACACCTTCAGGGAAAT+GGG 0.378780 2.2:-5124519 MS.gene30971:CDS
CATTGAAAGTTACTACCCTT+TGG 0.387447 2.2:-5124747 MS.gene30971:CDS
ACAAGCTCGTGAGTCTGATT+TGG 0.387571 2.2:-5125277 MS.gene30971:CDS
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 2.2:-5121919 MS.gene30971:CDS
TGACTCGAGCAGTGTTCTTT+GGG 0.389447 2.2:+5122459 None:intergenic
CTCCAATGTGATTCATTACC+TGG 0.402190 2.2:+5123347 None:intergenic
GAGAGGACTTGATGCTAAAC+AGG 0.402921 2.2:-5123407 MS.gene30971:CDS
GGAAAGAAGCTGAGGACAAT+AGG 0.403031 2.2:-5124477 MS.gene30971:CDS
GGAAGAGGAATTAGAGGGTG+TGG 0.409930 2.2:-5123266 MS.gene30971:CDS
TTGATCCATCGCTTTCCTTA+GGG 0.410024 2.2:+5124357 None:intergenic
CTCTTAGCTGCTTCCACGAA+TGG 0.415838 2.2:+5122398 None:intergenic
CTGTGGTAAGAGGGATTACT+TGG 0.417597 2.2:-5124623 MS.gene30971:CDS
ATGGGAAACACCTTCCTTCA+AGG 0.418880 2.2:+5121784 None:intergenic
CCGAGCTTCCAGTTCCAGCC+TGG 0.420885 2.2:+5124035 None:intergenic
GAGGAAGCTTCTCTCTGGTT+TGG 0.422362 2.2:-5124449 MS.gene30971:CDS
GGGACTTGAAAACTGTTTCT+GGG 0.423117 2.2:-5124498 MS.gene30971:CDS
TATAATTTCAAAGATATAGT+TGG 0.424336 2.2:-5124541 MS.gene30971:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 2.2:-5121920 MS.gene30971:CDS
CAAAATGGAGCTGCAGGAAA+AGG 0.431336 2.2:-5123287 MS.gene30971:CDS
TTACTTGGCTTTACGGGAGC+AGG 0.431347 2.2:-5124608 MS.gene30971:CDS
GTACCAGGAGAAAGTATCTA+AGG 0.432366 2.2:-5124070 MS.gene30971:CDS
AAATTCCAGAGTTCTGGTAT+TGG 0.450982 2.2:+5121827 None:intergenic
GGAAATCAAAATGGAGCTGC+AGG 0.455953 2.2:-5123293 MS.gene30971:CDS
AATGATGCTGAGGGTCATTT+GGG 0.461869 2.2:-5124922 MS.gene30971:CDS
TTTCTTCTCAAAATATAGCT+TGG 0.463871 2.2:+5123945 None:intergenic
ATGATGATGAGTTGTTTGTA+TGG 0.467760 2.2:-5124885 MS.gene30971:CDS
AAGCAGAGCACTGTGGTAAG+AGG 0.475875 2.2:-5124633 MS.gene30971:CDS
TCAAGTCCCCATTTCCCTGA+AGG 0.479524 2.2:+5124512 None:intergenic
AGGAGGAGCTGATCATGAAC+GGG 0.480433 2.2:-5124777 MS.gene30971:CDS
GCAGGTTGAACGCGAGTACC+AGG 0.481691 2.2:-5124085 MS.gene30971:CDS
TGGCTTTACGGGAGCAGGAG+CGG 0.481924 2.2:-5124603 MS.gene30971:CDS
CCAAACTGAACAACTGCAAA+GGG 0.483115 2.2:+5124706 None:intergenic
CATAATTTCTGTGAAAAGGA+TGG 0.486804 2.2:-5122438 MS.gene30971:CDS
AGATAGACTCTTTGGGTGGA+TGG 0.488205 2.2:-5124578 MS.gene30971:CDS
AAAGGGTAGTAACTTTCAAT+GGG 0.491933 2.2:+5124749 None:intergenic
AAGGAAAGCGATGGATCAAA+AGG 0.493646 2.2:-5124353 MS.gene30971:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 2.2:-5121912 MS.gene30971:CDS
TTTACTTGTACACAGTGGAT+TGG 0.502307 2.2:-5122485 MS.gene30971:intron
TTGTCCGTTACAACTTTGAA+CGG 0.502338 2.2:+5122251 None:intergenic
AGCGGGGAGATAGACTCTTT+GGG 0.503541 2.2:-5124585 MS.gene30971:CDS
AAAGCGAGGAAGCTTCTCTC+TGG 0.506331 2.2:-5124454 MS.gene30971:CDS
GAGTCATAATTTCTGTGAAA+AGG 0.512368 2.2:-5122442 MS.gene30971:CDS
ACTTGATGCTAAACAGGCAT+TGG 0.514013 2.2:-5123401 MS.gene30971:CDS
ACTTGATATCAAGCCATTCG+TGG 0.514781 2.2:-5122411 MS.gene30971:CDS
ATGAGTTGTTTGTATGGCCA+TGG 0.517649 2.2:-5124879 MS.gene30971:CDS
AGGAAGGAAGGCTTCCTTGA+AGG 0.521328 2.2:-5121798 MS.gene30971:CDS
TGTTGCTAAGCATTCAGCTC+TGG 0.522198 2.2:-5125076 MS.gene30971:CDS
AAAGTTGTAACGGACAAAGA+AGG 0.523153 2.2:-5122245 MS.gene30971:CDS
CGAACTTATTTCCCGTGAGA+AGG 0.523382 2.2:-5124007 MS.gene30971:CDS
GGTATTGGGTACCTACCACT+AGG 0.523917 2.2:+5121842 None:intergenic
GGAAGATCTTCAACAAACTC+TGG 0.525747 2.2:-5123245 MS.gene30971:CDS
TAGCATCAAGTCCTCTCTCC+AGG 0.527448 2.2:+5123413 None:intergenic
CATTGGAATTGGAGATAGAA+AGG 0.527648 2.2:-5123384 MS.gene30971:CDS
TTGGATGTTGCAGAAAGAAA+AGG 0.529965 2.2:-5123461 MS.gene30971:intron
GGCATTAGAAGAGCAACAAA+AGG 0.535693 2.2:-5123599 MS.gene30971:CDS
TAATCCTTGTTGTAGCAAAA+CGG 0.536850 2.2:+5125168 None:intergenic
TCCAGAATTGTGGGTGACTC+AGG 0.538417 2.2:-5125114 MS.gene30971:CDS
TAGTATTGTTAATGATAAGT+CGG 0.539521 2.2:-5124983 MS.gene30971:CDS
GTACTTGGCAGAAGAACATA+AGG 0.541395 2.2:-5123560 MS.gene30971:intron
GCTTTACGGGAGCAGGAGCG+GGG 0.541512 2.2:-5124601 MS.gene30971:CDS
ATAGTTGGCAAACACCTTCA+GGG 0.546668 2.2:-5124526 MS.gene30971:CDS
CAGTTTGGAAGAGAGTGGGA+TGG 0.548016 2.2:-5124691 MS.gene30971:CDS
ACTTTGAACGGATGCCAGCT+TGG 0.548798 2.2:+5122263 None:intergenic
AAAGTGGGATGACTATGTTA+AGG 0.550233 2.2:-5122288 MS.gene30971:CDS
AGAGATCAGCAAGATGCGGC+AGG 0.552419 2.2:-5124103 MS.gene30971:CDS
TTTGTCCTCTAAAGTTCCAA+AGG 0.553420 2.2:+5124731 None:intergenic
TGTTCAGTTTGGAAGAGAGT+GGG 0.554707 2.2:-5124695 MS.gene30971:CDS
TGCAGTAGCTACAGCTCTGA+AGG 0.557138 2.2:-5121882 MS.gene30971:CDS
CCAGGCTGGAACTGGAAGCT+CGG 0.558629 2.2:-5124035 MS.gene30971:CDS
CCTGAAGGATGATTACTACA+AGG 0.560609 2.2:-5125226 MS.gene30971:CDS
GATCCTTAGATACTTTCTCC+TGG 0.560678 2.2:+5124067 None:intergenic
AGCAGAGCACTGTGGTAAGA+GGG 0.561293 2.2:-5124632 MS.gene30971:CDS
TCCAAACTGAACAACTGCAA+AGG 0.564795 2.2:+5124705 None:intergenic
TTGTTCAGTTTGGAAGAGAG+TGG 0.565319 2.2:-5124696 MS.gene30971:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.567235 2.2:-5122437 MS.gene30971:CDS
AAGGAGGAGCTGATCATGAA+CGG 0.571820 2.2:-5124778 MS.gene30971:CDS
TTGTCCTCTAAAGTTCCAAA+GGG 0.573827 2.2:+5124732 None:intergenic
AAGGGAAAGAAAGCTTATTG+AGG 0.581176 2.2:-5121737 None:intergenic
GGTACCCAATACCAGAACTC+TGG 0.581859 2.2:-5121832 MS.gene30971:CDS
CAATCGAGTGGTGCTCAAAG+TGG 0.583300 2.2:-5122304 MS.gene30971:CDS
TTTCCCATTTAATTAAACAA+TGG 0.583512 2.2:-5121769 MS.gene30971:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.585994 2.2:-5123281 MS.gene30971:CDS
AATCGAGTGGTGCTCAAAGT+GGG 0.588592 2.2:-5122303 MS.gene30971:CDS
AAAATTCATGACCTGGAGAG+AGG 0.591924 2.2:-5123424 MS.gene30971:CDS
AAGTTGTAACGGACAAAGAA+GGG 0.592579 2.2:-5122244 MS.gene30971:CDS
GTATTGGGTACCTACCACTA+GGG 0.598398 2.2:+5121843 None:intergenic
GAGACATGCATCCAGAATTG+TGG 0.598602 2.2:-5125124 MS.gene30971:CDS
ATTGATAATGATAAGACCCC+TGG 0.598967 2.2:-5125009 MS.gene30971:CDS
GCAAAACGGACAGCGAAACG+TGG 0.601097 2.2:+5125182 None:intergenic
ACTTATTATGAATGATGCTG+AGG 0.601843 2.2:-5124932 MS.gene30971:CDS
TTCCAGGTAATGAATCACAT+TGG 0.602846 2.2:-5123349 MS.gene30971:CDS
TTGTTGTTTACAGAATGAGA+TGG 0.606515 2.2:-5123620 MS.gene30971:intron
TCACAAGAAAATTCATGACC+TGG 0.607531 2.2:-5123431 MS.gene30971:CDS
TCATTAACAATACTAACACC+AGG 0.607787 2.2:+5124991 None:intergenic
GCTTCTGCAGATCCTTCTCA+CGG 0.608508 2.2:+5123995 None:intergenic
AGGAAGGCTTCCTTGAAGGA+AGG 0.613280 2.2:-5121794 MS.gene30971:CDS
GCATCCGTTCAAAGTTGTAA+CGG 0.615867 2.2:-5122255 MS.gene30971:CDS
AGACATGCATCCAGAATTGT+GGG 0.616586 2.2:-5125123 MS.gene30971:CDS
TAGATATTATGAAGACCTGA+AGG 0.618566 2.2:-5125241 MS.gene30971:CDS
GTTGTTTGTATGGCCATGGA+TGG 0.618975 2.2:-5124875 MS.gene30971:CDS
ATGAGGTGAATGTGTCCCTA+AGG 0.619227 2.2:-5124372 MS.gene30971:CDS
TGTGTCCCTAAGGAAAGCGA+TGG 0.619461 2.2:-5124362 MS.gene30971:CDS
TTGGAGATAGAAAGGCTGAA+AGG 0.620293 2.2:-5123376 MS.gene30971:CDS
CTTCTGCAGATCCTTCTCAC+GGG 0.621177 2.2:+5123996 None:intergenic
GAAAAGGAAGAGGAATTAGA+GGG 0.621506 2.2:-5123271 MS.gene30971:CDS
CTGAGGACAATAGGAAAGCG+AGG 0.623390 2.2:-5124468 MS.gene30971:CDS
TGTTTCTGGGAAAGAAGCTG+AGG 0.631054 2.2:-5124485 MS.gene30971:CDS
CTTATTATGAATGATGCTGA+GGG 0.632417 2.2:-5124931 MS.gene30971:CDS
TCTCTAACTTCATAGCATTG+TGG 0.639586 2.2:+5124665 None:intergenic
TAAACAATGGAAGTTAAACA+AGG 0.639594 2.2:-5121756 MS.gene30971:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 2.2:-5121918 MS.gene30971:CDS
TGCAAATGAAAGCAATCGAG+TGG 0.643737 2.2:-5122316 MS.gene30971:CDS
CATTAGAGATCAGCAAGATG+CGG 0.643905 2.2:-5124107 MS.gene30971:intron
ATGAGTACAACCCTAGTGGT+AGG 0.644559 2.2:-5121853 MS.gene30971:CDS
ACTATGTTAAGGATCCAAGC+TGG 0.645868 2.2:-5122277 MS.gene30971:CDS
GGCTGGAACTGGAAGCTCGG+AGG 0.651348 2.2:-5124032 MS.gene30971:CDS
CATTAACAATACTAACACCA+GGG 0.651371 2.2:+5124992 None:intergenic
AATTGTGGGTGACTCAGGTG+AGG 0.654445 2.2:-5125109 MS.gene30971:CDS
ACAATGCTATGAAGTTAGAG+AGG 0.654487 2.2:-5124663 MS.gene30971:CDS
TACCTTAAAGCTGAAGACTG+AGG 0.656236 2.2:-5124422 MS.gene30971:CDS
GACAGCAAGCAAGTATGATG+AGG 0.660335 2.2:-5124389 MS.gene30971:CDS
AAACAATGGAAGTTAAACAA+GGG 0.663429 2.2:-5121755 MS.gene30971:CDS
GAAATGTATATTGAAAGCTA+TGG 0.677454 2.2:-5125054 MS.gene30971:CDS
CAAACACCTTCAGGGAAATG+GGG 0.680457 2.2:-5124518 MS.gene30971:CDS
GGACAAAGAAGGGAACTCCA+AGG 0.695584 2.2:-5122234 MS.gene30971:intron
TTAAATGAGTACAACCCTAG+TGG 0.707957 2.2:-5121857 MS.gene30971:CDS
ATTAACAATACTAACACCAG+GGG 0.713244 2.2:+5124993 None:intergenic
GGGGAGATAGACTCTTTGGG+TGG 0.722759 2.2:-5124582 MS.gene30971:CDS
AGCTTTCAAGCAGAGCACTG+TGG 0.771291 2.2:-5124640 MS.gene30971:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAATCATAAAAAAATTA+AGG - chr2.2:5122236-5122255 MS.gene30971:CDS 10.0%
!!! GAGAAAAAATATTAATTTTA+AGG + chr2.2:5124853-5124872 None:intergenic 10.0%
!!! TTCATAAAATTTTACATTTT+AGG - chr2.2:5124326-5124345 MS.gene30971:CDS 10.0%
!!! TTTGATTTTTTAATATTTCA+TGG - chr2.2:5122878-5122897 MS.gene30971:intron 10.0%
!! AAATCATAAAAAAATTAAGG+AGG - chr2.2:5122239-5122258 MS.gene30971:CDS 15.0%
!! AAGAAACATGTAATATATTT+CGG - chr2.2:5123105-5123124 MS.gene30971:intron 15.0%
!! ATAAGTTATTGAAAAATAAG+AGG + chr2.2:5123369-5123388 None:intergenic 15.0%
!! CAAAATAAACAATGAAATTA+TGG + chr2.2:5124514-5124533 None:intergenic 15.0%
!! TAAGTTATTGAAAAATAAGA+GGG + chr2.2:5123368-5123387 None:intergenic 15.0%
!! TATAATTTCAAAGATATAGT+TGG - chr2.2:5122492-5122511 MS.gene30971:intron 15.0%
!!! AAATTTGCTTCTTTTAAAAA+TGG - chr2.2:5123264-5123283 MS.gene30971:CDS 15.0%
!!! ATGTTAATTTTAATGTCTAA+TGG - chr2.2:5123894-5123913 MS.gene30971:intron 15.0%
!!! TGAATTGTTTTAATTGATAT+TGG - chr2.2:5122748-5122767 MS.gene30971:intron 15.0%
!! AAATTAACATTTATATGCTG+AGG + chr2.2:5123884-5123903 None:intergenic 20.0%
!! AATTGAAAACACCAAAAATT+TGG + chr2.2:5124182-5124201 None:intergenic 20.0%
!! ACTTCCATTGTTTAATTAAA+TGG + chr2.2:5125271-5125290 None:intergenic 20.0%
!! AGAAACATGTAATATATTTC+GGG - chr2.2:5123106-5123125 MS.gene30971:intron 20.0%
!! ATCTAACATATATTAGATCA+TGG + chr2.2:5125052-5125071 None:intergenic 20.0%
!! CAATTCAGTTTCTATATTTA+AGG - chr2.2:5124197-5124216 MS.gene30971:intron 20.0%
!! CTTCCATTGTTTAATTAAAT+GGG + chr2.2:5125270-5125289 None:intergenic 20.0%
!! GCTTTCTAATTATTAAGAAA+TGG + chr2.2:5124933-5124952 None:intergenic 20.0%
!! TACAAGTAAATGTAATTACT+TGG + chr2.2:5124538-5124557 None:intergenic 20.0%
!! TAGTATTGTTAATGATAAGT+CGG - chr2.2:5122050-5122069 MS.gene30971:intron 20.0%
!! TATAGATGAGAAGAAAAAAT+TGG - chr2.2:5123716-5123735 MS.gene30971:intron 20.0%
!! TTCTTAATAATTAGAAAGCA+TGG - chr2.2:5124934-5124953 MS.gene30971:CDS 20.0%
!! TTTCCCATTTAATTAAACAA+TGG - chr2.2:5125264-5125283 MS.gene30971:CDS 20.0%
!!! TACTACTATATCTATCATTT+TGG - chr2.2:5122812-5122831 MS.gene30971:intron 20.0%
!!! TTTTACATTTTAGGTGAAAT+TGG - chr2.2:5124335-5124354 MS.gene30971:CDS 20.0%
! AAAACACCAAAAATTTGGAT+TGG + chr2.2:5124177-5124196 None:intergenic 25.0%
! AAAATTGGAGGAAATCAAAA+TGG - chr2.2:5123731-5123750 MS.gene30971:intron 25.0%
! AAACAATGGAAGTTAAACAA+GGG - chr2.2:5125278-5125297 MS.gene30971:CDS 25.0%
! AACTAAAAACTGTAGGTAAT+AGG + chr2.2:5123514-5123533 None:intergenic 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr2.2:5124596-5124615 MS.gene30971:CDS 25.0%
! ATATGTTAGATATATCACAC+AGG - chr2.2:5125061-5125080 MS.gene30971:CDS 25.0%
! ATGCTTGAACATTTCAATAA+GGG - chr2.2:5122708-5122727 MS.gene30971:intron 25.0%
! GAAATGTATATTGAAAGCTA+TGG - chr2.2:5121979-5121998 MS.gene30971:intron 25.0%
! TAAAAAGCTGAAAAGTTTGA+AGG - chr2.2:5125103-5125122 MS.gene30971:CDS 25.0%
! TAAAACTTAAGCAGAAATGT+AGG - chr2.2:5124001-5124020 MS.gene30971:CDS 25.0%
! TAAACAATGGAAGTTAAACA+AGG - chr2.2:5125277-5125296 MS.gene30971:CDS 25.0%
! TATTGAAAAATAAGAGGGAT+TGG + chr2.2:5123363-5123382 None:intergenic 25.0%
! TGAATTACAATCATCATCTT+TGG + chr2.2:5124310-5124329 None:intergenic 25.0%
! TGATGAAAAAATGATGTACT+TGG - chr2.2:5123458-5123477 MS.gene30971:intron 25.0%
! TTGTTCACATGTATTTACAA+CGG - chr2.2:5124151-5124170 MS.gene30971:intron 25.0%
! TTTCTTCTCAAAATATAGCT+TGG + chr2.2:5123091-5123110 None:intergenic 25.0%
! TTTGAAAGTGATCAATTTAC+AGG - chr2.2:5123235-5123254 MS.gene30971:CDS 25.0%
! TTTGTCATATTGTTTCATAC+TGG - chr2.2:5124414-5124433 MS.gene30971:CDS 25.0%
!! AACTAATCTTTTACAAAGTC+AGG - chr2.2:5123947-5123966 MS.gene30971:CDS 25.0%
!! AATGGTGCATTATATGTTTT+AGG + chr2.2:5124915-5124934 None:intergenic 25.0%
!! ATACAGCTATTAACTTTTTG+CGG + chr2.2:5123854-5123873 None:intergenic 25.0%
!! ATGGTGCATTATATGTTTTA+GGG + chr2.2:5124914-5124933 None:intergenic 25.0%
!! ATTTCTGCTTAAGTTTTACA+AGG + chr2.2:5123999-5124018 None:intergenic 25.0%
!! TAATTAGAAAGCATGGTAAT+TGG - chr2.2:5124941-5124960 MS.gene30971:CDS 25.0%
!!! AATTATGTTTTGAGAACTCT+TGG - chr2.2:5123549-5123568 MS.gene30971:intron 25.0%
!!! ACTTATTTTGCTTCAAGTTT+AGG + chr2.2:5124462-5124481 None:intergenic 25.0%
!!! GAAATCTTATTTAAGTTGCT+TGG - chr2.2:5124118-5124137 MS.gene30971:intron 25.0%
AAAAGTTTGAAGGATGAGTT+CGG - chr2.2:5125113-5125132 MS.gene30971:CDS 30.0%
AAAGCATGGTAATTGGTATT+GGG - chr2.2:5124948-5124967 MS.gene30971:CDS 30.0%
AAAGGGTAGTAACTTTCAAT+GGG + chr2.2:5122287-5122306 None:intergenic 30.0%
ACTTATTATGAATGATGCTG+AGG - chr2.2:5122101-5122120 MS.gene30971:intron 30.0%
AGATGAGAAGAAAAAATTGG+AGG - chr2.2:5123719-5123738 MS.gene30971:intron 30.0%
ATTAACAATACTAACACCAG+GGG + chr2.2:5122043-5122062 None:intergenic 30.0%
CATAATTTCTGTGAAAAGGA+TGG - chr2.2:5124595-5124614 MS.gene30971:CDS 30.0%
CATTAACAATACTAACACCA+GGG + chr2.2:5122044-5122063 None:intergenic 30.0%
CTTATTATGAATGATGCTGA+GGG - chr2.2:5122102-5122121 MS.gene30971:intron 30.0%
GAGTCATAATTTCTGTGAAA+AGG - chr2.2:5124591-5124610 MS.gene30971:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG - chr2.2:5122707-5122726 MS.gene30971:intron 30.0%
TAGATATTATGAAGACCTGA+AGG - chr2.2:5121792-5121811 MS.gene30971:CDS 30.0%
TAGGGGATAAATATATCCAA+AGG + chr2.2:5124896-5124915 None:intergenic 30.0%
TCATTAACAATACTAACACC+AGG + chr2.2:5122045-5122064 None:intergenic 30.0%
TCTATTTACTGGAAATTTGC+TGG - chr2.2:5124977-5124996 MS.gene30971:CDS 30.0%
TGATTTGAATGTTTGCAAAC+AGG + chr2.2:5124091-5124110 None:intergenic 30.0%
TTACATTTACTTGTACACAG+TGG - chr2.2:5124543-5124562 MS.gene30971:CDS 30.0%
TTAGGTGAAATTGGTAGAAT+CGG - chr2.2:5124344-5124363 MS.gene30971:CDS 30.0%
! ATCACACAGGAAATTTTAGA+CGG - chr2.2:5125074-5125093 MS.gene30971:CDS 30.0%
! ATGATGATGAGTTGTTTGTA+TGG - chr2.2:5122148-5122167 MS.gene30971:intron 30.0%
! CAAAAAGTGGAAAGTATGTT+GGG - chr2.2:5122214-5122233 MS.gene30971:intron 30.0%
! GTTCTGTTTCTTTGATTTAG+AGG - chr2.2:5122772-5122791 MS.gene30971:intron 30.0%
! TAATCCTTGTTGTAGCAAAA+CGG + chr2.2:5121868-5121887 None:intergenic 30.0%
! TACAGCTATTAACTTTTTGC+GGG + chr2.2:5123853-5123872 None:intergenic 30.0%
!! CTAACAACACTTTTTGTGAT+TGG + chr2.2:5123291-5123310 None:intergenic 30.0%
!! TGGTGCATTATATGTTTTAG+GGG + chr2.2:5124913-5124932 None:intergenic 30.0%
!! TTCATACTGGTTCAATCATA+AGG - chr2.2:5124427-5124446 MS.gene30971:CDS 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG - chr2.2:5123413-5123432 MS.gene30971:CDS 30.0%
!! TTTTTCAAAATCACCATCCA+TGG + chr2.2:5122174-5122193 None:intergenic 30.0%
!!! CAACATACTTTCCACTTTTT+GGG + chr2.2:5122215-5122234 None:intergenic 30.0%
AAAGTGGGATGACTATGTTA+AGG - chr2.2:5124745-5124764 MS.gene30971:CDS 35.0%
AAAGTTTGAAGGATGAGTTC+GGG - chr2.2:5125114-5125133 MS.gene30971:CDS 35.0%
AATTATGGCAACAAAGCAAC+AGG + chr2.2:5124499-5124518 None:intergenic 35.0%
ACAATGCTATGAAGTTAGAG+AGG - chr2.2:5122370-5122389 MS.gene30971:CDS 35.0%
ACTCATATTGACCCAAAAAG+TGG - chr2.2:5122201-5122220 MS.gene30971:intron 35.0%
ATTTGACACAGAAGACCAAA+TGG + chr2.2:5123332-5123351 None:intergenic 35.0%
CAAAGGGTAGTAACTTTCAA+TGG + chr2.2:5122288-5122307 None:intergenic 35.0%
CATTGAAAGTTACTACCCTT+TGG - chr2.2:5122286-5122305 MS.gene30971:CDS 35.0%
CATTGGAATTGGAGATAGAA+AGG - chr2.2:5123649-5123668 MS.gene30971:intron 35.0%
GAAAAGGAAGAGGAATTAGA+GGG - chr2.2:5123762-5123781 MS.gene30971:intron 35.0%
GATTTAGAGGAGAAACATTC+TGG - chr2.2:5122785-5122804 MS.gene30971:intron 35.0%
GTGTTCATGAGAAGGTTAAA+AGG + chr2.2:5123173-5123192 None:intergenic 35.0%
GTTATGTTATGACACACCTT+TGG - chr2.2:5124877-5124896 MS.gene30971:CDS 35.0%
TAGGTGAAATTGGTAGAATC+GGG - chr2.2:5124345-5124364 MS.gene30971:CDS 35.0%
TCACAAGAAAATTCATGACC+TGG - chr2.2:5123602-5123621 MS.gene30971:CDS 35.0%
TCTCTAACTTCATAGCATTG+TGG + chr2.2:5122371-5122390 None:intergenic 35.0%
TTAAATGAGTACAACCCTAG+TGG - chr2.2:5125176-5125195 MS.gene30971:CDS 35.0%
TTCCAGGTAATGAATCACAT+TGG - chr2.2:5123684-5123703 MS.gene30971:intron 35.0%
TTGGATGTTGCAGAAAGAAA+AGG - chr2.2:5123572-5123591 MS.gene30971:CDS 35.0%
TTGGGTAGTGATCTATTTAC+TGG - chr2.2:5124966-5124985 MS.gene30971:CDS 35.0%
TTGTCCGTTACAACTTTGAA+CGG + chr2.2:5124785-5124804 None:intergenic 35.0%
TTTACTTGTACACAGTGGAT+TGG - chr2.2:5124548-5124567 MS.gene30971:CDS 35.0%
! AAATTCCAGAGTTCTGGTAT+TGG + chr2.2:5125209-5125228 None:intergenic 35.0%
! AATTCCAGAGTTCTGGTATT+GGG + chr2.2:5125208-5125227 None:intergenic 35.0%
! ACAAAAGTGTGTTCATGAGA+AGG + chr2.2:5123181-5123200 None:intergenic 35.0%
! CATGAACACACTTTTGTGAT+AGG - chr2.2:5123184-5123203 MS.gene30971:intron 35.0%
! CCAAAAAGTGGAAAGTATGT+TGG - chr2.2:5122213-5122232 MS.gene30971:intron 35.0%
! GAAAGCATGGTAATTGGTAT+TGG - chr2.2:5124947-5124966 MS.gene30971:CDS 35.0%
! GCTTACAGTCTGTTACATTT+TGG - chr2.2:5122839-5122858 MS.gene30971:intron 35.0%
!! AAAGTTGTAACGGACAAAGA+AGG - chr2.2:5124788-5124807 MS.gene30971:CDS 35.0%
!! AAGTTGTAACGGACAAAGAA+GGG - chr2.2:5124789-5124808 MS.gene30971:CDS 35.0%
!! AGTCTTCAGCTTTAAGGTAT+TGG + chr2.2:5122610-5122629 None:intergenic 35.0%
!! ATTGATAATGATAAGACCCC+TGG - chr2.2:5122024-5122043 MS.gene30971:intron 35.0%
!! CCAACATACTTTCCACTTTT+TGG + chr2.2:5122216-5122235 None:intergenic 35.0%
!! GAATTTTAGAGAAGGAAGGA+AGG - chr2.2:5125223-5125242 MS.gene30971:CDS 35.0%
!! TCTCTAAAATTCCAGAGTTC+TGG + chr2.2:5125215-5125234 None:intergenic 35.0%
!! TCTGGAATTTTAGAGAAGGA+AGG - chr2.2:5125219-5125238 MS.gene30971:CDS 35.0%
!! TTGTCCTCTAAAGTTCCAAA+GGG + chr2.2:5122304-5122323 None:intergenic 35.0%
!! TTTGTCCTCTAAAGTTCCAA+AGG + chr2.2:5122305-5122324 None:intergenic 35.0%
!!! ATGTTTTGAGAACTCTTGGT+TGG - chr2.2:5123553-5123572 MS.gene30971:intron 35.0%
!!! GAACTCTGGAATTTTAGAGA+AGG - chr2.2:5125215-5125234 MS.gene30971:CDS 35.0%
AAAATTCATGACCTGGAGAG+AGG - chr2.2:5123609-5123628 MS.gene30971:CDS 40.0%
AAAGCTGAAGACTGAGGAAT+TGG - chr2.2:5122617-5122636 MS.gene30971:intron 40.0%
AAGGAAAGCGATGGATCAAA+AGG - chr2.2:5122680-5122699 MS.gene30971:intron 40.0%
AAGTTTGAAGGATGAGTTCG+GGG - chr2.2:5125115-5125134 MS.gene30971:CDS 40.0%
AATGATGCTGAGGGTCATTT+GGG - chr2.2:5122111-5122130 MS.gene30971:intron 40.0%
ACTATGTTAAGGATCCAAGC+TGG - chr2.2:5124756-5124775 MS.gene30971:CDS 40.0%
ACTTGATATCAAGCCATTCG+TGG - chr2.2:5124622-5124641 MS.gene30971:CDS 40.0%
ACTTGATGCTAAACAGGCAT+TGG - chr2.2:5123632-5123651 MS.gene30971:intron 40.0%
AGACATGCATCCAGAATTGT+GGG - chr2.2:5121910-5121929 MS.gene30971:CDS 40.0%
ATAGTTGGCAAACACCTTCA+GGG - chr2.2:5122507-5122526 MS.gene30971:intron 40.0%
ATGAGTTGTTTGTATGGCCA+TGG - chr2.2:5122154-5122173 MS.gene30971:intron 40.0%
CATCTTTGGACACAAACAAC+TGG + chr2.2:5124296-5124315 None:intergenic 40.0%
CATTAGAGATCAGCAAGATG+CGG - chr2.2:5122926-5122945 MS.gene30971:intron 40.0%
CCAAACTGAACAACTGCAAA+GGG + chr2.2:5122330-5122349 None:intergenic 40.0%
CCTGAAGGATGATTACTACA+AGG - chr2.2:5121807-5121826 MS.gene30971:CDS 40.0%
CCTTGTAGTAATCATCCTTC+AGG + chr2.2:5121810-5121829 None:intergenic 40.0%
CTAAGGATCATGAAAAAGCC+AGG - chr2.2:5122980-5122999 MS.gene30971:intron 40.0%
CTCCAATGTGATTCATTACC+TGG + chr2.2:5123689-5123708 None:intergenic 40.0%
GATCCTTAGATACTTTCTCC+TGG + chr2.2:5122969-5122988 None:intergenic 40.0%
GCAGCTGAACTAAAAACTGT+AGG + chr2.2:5123521-5123540 None:intergenic 40.0%
GCATCCGTTCAAAGTTGTAA+CGG - chr2.2:5124778-5124797 MS.gene30971:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG - chr2.2:5123761-5123780 MS.gene30971:intron 40.0%
GGAAGATCTTCAACAAACTC+TGG - chr2.2:5123788-5123807 MS.gene30971:intron 40.0%
GGCATTAGAAGAGCAACAAA+AGG - chr2.2:5123434-5123453 MS.gene30971:CDS 40.0%
GTACTTGGCAGAAGAACATA+AGG - chr2.2:5123473-5123492 MS.gene30971:intron 40.0%
TACCTTAAAGCTGAAGACTG+AGG - chr2.2:5122611-5122630 MS.gene30971:intron 40.0%
TATAGTTGGCAAACACCTTC+AGG - chr2.2:5122506-5122525 MS.gene30971:intron 40.0%
TCAACAAACTCTGGTTGTTC+AGG - chr2.2:5123797-5123816 MS.gene30971:intron 40.0%
TCCAAACTGAACAACTGCAA+AGG + chr2.2:5122331-5122350 None:intergenic 40.0%
TGCAAATGAAAGCAATCGAG+TGG - chr2.2:5124717-5124736 MS.gene30971:CDS 40.0%
TGTTAGCATTCCTTGCTCTA+TGG - chr2.2:5123305-5123324 MS.gene30971:CDS 40.0%
TGTTCAGTTTGGAAGAGAGT+GGG - chr2.2:5122338-5122357 MS.gene30971:CDS 40.0%
TTCCTCAGTCTTCAGCTTTA+AGG + chr2.2:5122616-5122635 None:intergenic 40.0%
TTCGTGAAGTCATTGTACCT+TGG + chr2.2:5124819-5124838 None:intergenic 40.0%
TTGATCCATCGCTTTCCTTA+GGG + chr2.2:5122679-5122698 None:intergenic 40.0%
TTGGAGATAGAAAGGCTGAA+AGG - chr2.2:5123657-5123676 MS.gene30971:intron 40.0%
TTGTTCAGTTTGGAAGAGAG+TGG - chr2.2:5122337-5122356 MS.gene30971:CDS 40.0%
TTTGATCCATCGCTTTCCTT+AGG + chr2.2:5122680-5122699 None:intergenic 40.0%
! CAACGGCCAATCCAAATTTT+TGG - chr2.2:5124168-5124187 MS.gene30971:intron 40.0%
! GGGACTTGAAAACTGTTTCT+GGG - chr2.2:5122535-5122554 MS.gene30971:intron 40.0%
! TGCTGGTGTTAGCACTTATT+TGG - chr2.2:5124994-5125013 MS.gene30971:CDS 40.0%
!! ACTACCCTTTGGAACTTTAG+AGG - chr2.2:5122297-5122316 MS.gene30971:CDS 40.0%
!! AGAGGGATTACTTGGCTTTA+CGG - chr2.2:5122418-5122437 MS.gene30971:CDS 40.0%
!! CACGAGCTTGTTCTGATTTT+CGG + chr2.2:5121747-5121766 None:intergenic 40.0%
!! GTACCAGGAGAAAGTATCTA+AGG - chr2.2:5122963-5122982 MS.gene30971:intron 40.0%
!! TGCTAAACAGGCATTGGAAT+TGG - chr2.2:5123638-5123657 MS.gene30971:intron 40.0%
AAGGAGGAGCTGATCATGAA+CGG - chr2.2:5122255-5122274 MS.gene30971:CDS 45.0%
AATCGAGTGGTGCTCAAAGT+GGG - chr2.2:5124730-5124749 MS.gene30971:CDS 45.0%
ACAAGCTCGTGAGTCTGATT+TGG - chr2.2:5121756-5121775 MS.gene30971:CDS 45.0%
ACCAAATGGTCCATAGAGCA+AGG + chr2.2:5123318-5123337 None:intergenic 45.0%
AGATAGACTCTTTGGGTGGA+TGG - chr2.2:5122455-5122474 MS.gene30971:CDS 45.0%
ATGACTCGAGCAGTGTTCTT+TGG + chr2.2:5124578-5124597 None:intergenic 45.0%
ATGAGGTGAATGTGTCCCTA+AGG - chr2.2:5122661-5122680 MS.gene30971:intron 45.0%
ATGAGTACAACCCTAGTGGT+AGG - chr2.2:5125180-5125199 MS.gene30971:CDS 45.0%
ATGGGAAACACCTTCCTTCA+AGG + chr2.2:5125252-5125271 None:intergenic 45.0%
CAAAATGGAGCTGCAGGAAA+AGG - chr2.2:5123746-5123765 MS.gene30971:intron 45.0%
CAAACACCTTCAGGGAAATG+GGG - chr2.2:5122515-5122534 MS.gene30971:intron 45.0%
CCCTTTGCAGTTGTTCAGTT+TGG - chr2.2:5122327-5122346 MS.gene30971:CDS 45.0%
CGAACTTATTTCCCGTGAGA+AGG - chr2.2:5123026-5123045 MS.gene30971:intron 45.0%
CTGTGGTAAGAGGGATTACT+TGG - chr2.2:5122410-5122429 MS.gene30971:CDS 45.0%
GAAATTGGTAGAATCGGGTC+AGG - chr2.2:5124350-5124369 MS.gene30971:CDS 45.0%
GAATGATGCTGAGGGTCATT+TGG - chr2.2:5122110-5122129 MS.gene30971:intron 45.0%
GACAGCAAGCAAGTATGATG+AGG - chr2.2:5122644-5122663 MS.gene30971:intron 45.0%
GAGACATGCATCCAGAATTG+TGG - chr2.2:5121909-5121928 MS.gene30971:CDS 45.0%
GAGAGGACTTGATGCTAAAC+AGG - chr2.2:5123626-5123645 MS.gene30971:intron 45.0%
GCAAACACCTTCAGGGAAAT+GGG - chr2.2:5122514-5122533 MS.gene30971:intron 45.0%
GGAAAGAAGCTGAGGACAAT+AGG - chr2.2:5122556-5122575 MS.gene30971:intron 45.0%
GGAAATCAAAATGGAGCTGC+AGG - chr2.2:5123740-5123759 MS.gene30971:intron 45.0%
GGGGACTTGAAAACTGTTTC+TGG - chr2.2:5122534-5122553 MS.gene30971:intron 45.0%
GTATTGGGTACCTACCACTA+GGG + chr2.2:5125193-5125212 None:intergenic 45.0%
GTTGTTTGTATGGCCATGGA+TGG - chr2.2:5122158-5122177 MS.gene30971:intron 45.0%
TCCTTGCTCTATGGACCATT+TGG - chr2.2:5123314-5123333 MS.gene30971:CDS 45.0%
TGACTCGAGCAGTGTTCTTT+GGG + chr2.2:5124577-5124596 None:intergenic 45.0%
TGTTGCTAAGCATTCAGCTC+TGG - chr2.2:5121957-5121976 MS.gene30971:intron 45.0%
TTTCCCTGCTATGAGCTGTA+TGG - chr2.2:5125025-5125044 MS.gene30971:CDS 45.0%
! CTGTCCGTTTTGCTACAACA+AGG - chr2.2:5121861-5121880 MS.gene30971:CDS 45.0%
!! GAGGGATTACTTGGCTTTAC+GGG - chr2.2:5122419-5122438 MS.gene30971:CDS 45.0%
!! TGTTTCTGGGAAAGAAGCTG+AGG - chr2.2:5122548-5122567 MS.gene30971:intron 45.0%
AAAGCGAGGAAGCTTCTCTC+TGG - chr2.2:5122579-5122598 MS.gene30971:intron 50.0%
AAGGCTGAAAGGAGCTTTCC+AGG - chr2.2:5123668-5123687 MS.gene30971:intron 50.0%
AATTGTGGGTGACTCAGGTG+AGG - chr2.2:5121924-5121943 MS.gene30971:CDS 50.0%
ACCTGAGTCACCCACAATTC+TGG + chr2.2:5121923-5121942 None:intergenic 50.0%
ACTTTGAACGGATGCCAGCT+TGG + chr2.2:5124773-5124792 None:intergenic 50.0%
AGCGGGGAGATAGACTCTTT+GGG - chr2.2:5122448-5122467 MS.gene30971:CDS 50.0%
AGGAAGGAAGGCTTCCTTGA+AGG - chr2.2:5125235-5125254 MS.gene30971:CDS 50.0%
AGGAAGGCTTCCTTGAAGGA+AGG - chr2.2:5125239-5125258 MS.gene30971:CDS 50.0%
AGGAGGAGCTGATCATGAAC+GGG - chr2.2:5122256-5122275 MS.gene30971:CDS 50.0%
CAATCGAGTGGTGCTCAAAG+TGG - chr2.2:5124729-5124748 MS.gene30971:CDS 50.0%
CAGTTTGGAAGAGAGTGGGA+TGG - chr2.2:5122342-5122361 MS.gene30971:CDS 50.0%
CTCTTAGCTGCTTCCACGAA+TGG + chr2.2:5124638-5124657 None:intergenic 50.0%
CTGAGGACAATAGGAAAGCG+AGG - chr2.2:5122565-5122584 MS.gene30971:intron 50.0%
CTTCTGCAGATCCTTCTCAC+GGG + chr2.2:5123040-5123059 None:intergenic 50.0%
GAGGAAGCTTCTCTCTGGTT+TGG - chr2.2:5122584-5122603 MS.gene30971:intron 50.0%
GCTTCTGCAGATCCTTCTCA+CGG + chr2.2:5123041-5123060 None:intergenic 50.0%
GGAAGAGGAATTAGAGGGTG+TGG - chr2.2:5123767-5123786 MS.gene30971:intron 50.0%
GGACAAAGAAGGGAACTCCA+AGG - chr2.2:5124799-5124818 MS.gene30971:CDS 50.0%
GGATCATGAAAAAGCCAGGC+TGG - chr2.2:5122984-5123003 MS.gene30971:intron 50.0%
GGCAAACACCTTCAGGGAAA+TGG - chr2.2:5122513-5122532 MS.gene30971:intron 50.0%
GGTACCCAATACCAGAACTC+TGG - chr2.2:5125201-5125220 MS.gene30971:CDS 50.0%
GGTCCATACAGCTCATAGCA+GGG + chr2.2:5125031-5125050 None:intergenic 50.0%
TAGCATCAAGTCCTCTCTCC+AGG + chr2.2:5123623-5123642 None:intergenic 50.0%
TCAAGTCCCCATTTCCCTGA+AGG + chr2.2:5122524-5122543 None:intergenic 50.0%
TCCAGAATTGTGGGTGACTC+AGG - chr2.2:5121919-5121938 MS.gene30971:CDS 50.0%
TGAAAAAGCCAGGCTGGAAC+TGG - chr2.2:5122990-5123009 MS.gene30971:intron 50.0%
TGGTCCATACAGCTCATAGC+AGG + chr2.2:5125032-5125051 None:intergenic 50.0%
TGTGTCCCTAAGGAAAGCGA+TGG - chr2.2:5122671-5122690 MS.gene30971:intron 50.0%
! GGTATTGGGTACCTACCACT+AGG + chr2.2:5125194-5125213 None:intergenic 50.0%
! TGCAGTAGCTACAGCTCTGA+AGG - chr2.2:5125151-5125170 MS.gene30971:CDS 50.0%
!! AAGCAGAGCACTGTGGTAAG+AGG - chr2.2:5122400-5122419 MS.gene30971:CDS 50.0%
!! AGCAGAGCACTGTGGTAAGA+GGG - chr2.2:5122401-5122420 MS.gene30971:CDS 50.0%
!! AGCTTTCAAGCAGAGCACTG+TGG - chr2.2:5122393-5122412 MS.gene30971:CDS 50.0%
!! TTACTTGGCTTTACGGGAGC+AGG - chr2.2:5122425-5122444 MS.gene30971:CDS 50.0%
AGAGATCAGCAAGATGCGGC+AGG - chr2.2:5122930-5122949 MS.gene30971:intron 55.0%
GAAGGATGAGTTCGGGGATG+AGG - chr2.2:5125121-5125140 MS.gene30971:CDS 55.0%
GAGCGGGGAGATAGACTCTT+TGG - chr2.2:5122447-5122466 MS.gene30971:CDS 55.0%
GCAAAACGGACAGCGAAACG+TGG + chr2.2:5121854-5121873 None:intergenic 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG - chr2.2:5123752-5123771 MS.gene30971:intron 55.0%
GGGGAGATAGACTCTTTGGG+TGG - chr2.2:5122451-5122470 MS.gene30971:CDS 55.0%
CCAGGCTGGAACTGGAAGCT+CGG - chr2.2:5122998-5123017 MS.gene30971:intron 60.0%
! GCAGGTTGAACGCGAGTACC+AGG - chr2.2:5122948-5122967 MS.gene30971:intron 60.0%
! TGGCTTTACGGGAGCAGGAG+CGG - chr2.2:5122430-5122449 MS.gene30971:CDS 60.0%
CCGAGCTTCCAGTTCCAGCC+TGG + chr2.2:5123001-5123020 None:intergenic 65.0%
GCTTTACGGGAGCAGGAGCG+GGG - chr2.2:5122432-5122451 MS.gene30971:CDS 65.0%
GGCTGGAACTGGAAGCTCGG+AGG - chr2.2:5123001-5123020 MS.gene30971:intron 65.0%
GGCTTTACGGGAGCAGGAGC+GGG - chr2.2:5122431-5122450 MS.gene30971:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 5121739 5125316 5121739 ID=MS.gene30971
chr2.2 mRNA 5121739 5125316 5121739 ID=MS.gene30971.t1;Parent=MS.gene30971
chr2.2 exon 5124326 5125316 5124326 ID=MS.gene30971.t1.exon1;Parent=MS.gene30971.t1
chr2.2 CDS 5124326 5125316 5124326 ID=cds.MS.gene30971.t1;Parent=MS.gene30971.t1
chr2.2 exon 5123942 5124123 5123942 ID=MS.gene30971.t1.exon2;Parent=MS.gene30971.t1
chr2.2 CDS 5123942 5124123 5123942 ID=cds.MS.gene30971.t1;Parent=MS.gene30971.t1
chr2.2 exon 5123561 5123629 5123561 ID=MS.gene30971.t1.exon3;Parent=MS.gene30971.t1
chr2.2 CDS 5123561 5123629 5123561 ID=cds.MS.gene30971.t1;Parent=MS.gene30971.t1
chr2.2 exon 5123186 5123470 5123186 ID=MS.gene30971.t1.exon4;Parent=MS.gene30971.t1
chr2.2 CDS 5123186 5123470 5123186 ID=cds.MS.gene30971.t1;Parent=MS.gene30971.t1
chr2.2 exon 5122235 5122492 5122235 ID=MS.gene30971.t1.exon5;Parent=MS.gene30971.t1
chr2.2 CDS 5122235 5122492 5122235 ID=cds.MS.gene30971.t1;Parent=MS.gene30971.t1
chr2.2 exon 5121739 5121972 5121739 ID=MS.gene30971.t1.exon6;Parent=MS.gene30971.t1
chr2.2 CDS 5121739 5121972 5121739 ID=cds.MS.gene30971.t1;Parent=MS.gene30971.t1
Gene Sequence

>MS.gene30971

ATGTACCGAAAATCAGAACAAGCTCGTGAGTCTGATTTGGAGTACTACAAGCGTAGATATTATGAAGACCTGAAGGATGATTACTACAAGGAAACGCTCAAAATCTCTGATTCCACGTTTCGCTGTCCGTTTTGCTACAACAAGGATTACTACTCTTTGAGTGAGCTATTGAGACATGCATCCAGAATTGTGGGTGACTCAGGTGAGGCAGTTAAAGATGTTGCTAAGCATTCAGCTCTGGAAATGTATATTGAAAGCTATGGTGATAAGTTAACTGCTGTTACTATTGATAATGATAAGACCCCTGGTGTTAGTATTGTTAATGATAAGTCGGTTAATTTGAGTATCGCTAATGAGAAGTCACTTATTATGAATGATGCTGAGGGTCATTTGGGTAATGTGAATGTTGATGATGATGAGTTGTTTGTATGGCCATGGATGGTGATTTTGAAAAATATTGTTACTCATATTGACCCAAAAAGTGGAAAGTATGTTGGGAAAAATCATAAAAAAATTAAGGAGGAGCTGATCATGAACGGGTTTCACCCATTGAAAGTTACTACCCTTTGGAACTTTAGAGGACAAACACCCTTTGCAGTTGTTCAGTTTGGAAGAGAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAGAGGAGCTTTCAAGCAGAGCACTGTGGTAAGAGGGATTACTTGGCTTTACGGGAGCAGGAGCGGGGAGATAGACTCTTTGGGTGGATGGCACGTCGTGATGACTATAATTTCAAAGATATAGTTGGCAAACACCTTCAGGGAAATGGGGACTTGAAAACTGTTTCTGGGAAAGAAGCTGAGGACAATAGGAAAGCGAGGAAGCTTCTCTCTGGTTTGGCCAATACCTTAAAGCTGAAGACTGAGGAATTGGAACAGACAGCAAGCAAGTATGATGAGGTGAATGTGTCCCTAAGGAAAGCGATGGATCAAAAGGAAAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAGTTAAACTGAATTGTTTTAATTGATATTGGTGTTCTGTTTCTTTGATTTAGAGGAGAAACATTCTGGTTTTTACTACTATATCTATCATTTTGGTGTAGCTTACAGTCTGTTACATTTTGGAATGATTTGTAGTTGATTTGATTTTTTAATATTTCATGGTAGCTTAGTCTGTTTTATATTGTTTCATTAGAGATCAGCAAGATGCGGCAGGTTGAACGCGAGTACCAGGAGAAAGTATCTAAGGATCATGAAAAAGCCAGGCTGGAACTGGAAGCTCGGAGGAACGAACTTATTTCCCGTGAGAAGGATCTGCAGAAGCGTGAAGCAGATAATCACAATGAGAAAGCCAAGCTATATTTTGAGAAGAAACATGTAATATATTTCGGGTCTTTTAATTTATGATAGCAATGCTAAATGAATTATTCTCTCCTTTTAACCTTCTCATGAACACACTTTTGTGATAGGTCAATTTCTAAAAATTTTAACACATTTATTTGAAAGTGATCAATTTACAGGAGAACTAAATTTGCTTCTTTTAAAAATGGACCAATCACAAAAAGTGTTGTTAGCATTCCTTGCTCTATGGACCATTTGGTCTTCTGTGTCAAATTATGTATACCAATCCCTCTTATTTTTCAATAACTTATGACATATTAAATCTGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCATTAGAAGAGCAACAAAAGGCTGATGAAAAAATGATGTACTTGGCAGAAGAACATAAGGCACACTTTTCATTTTCCTATTACCTACAGTTTTTAGTTCAGCTGCATGTATATAATTATGTTTTGAGAACTCTTGGTTGGATGTTGCAGAAAGAAAAGGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTTGATGCTAAACAGGCATTGGAATTGGAGATAGAAAGGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTGGAGAGACTGATATAGATGAGAAGAAAAAATTGGAGGAAATCAAAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGTGTGGAAGATCTTCAACAAACTCTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGTTAATAGCTGTATGTATCTTCCTCAGCATATAAATGTTAATTTTAATGTCTAATGGTCTGAAAATCAACTTTAAAATGTCTTCTGTAACTAATCTTTTACAAAGTCAGGATATATTGTTTTATTTGTATAAATTGCCTTGTAAAACTTAAGCAGAAATGTAGGATCATTTATATTTTGTAATTGACATACAGCTGTTTATATAATACTACTACTAAAAGAAAAGTGTCCTGTTTGCAAACATTCAAATCATGTAGTTGAAATCTTATTTAAGTTGCTTGGAAGACGTGTCTTGTTCACATGTATTTACAACGGCCAATCCAAATTTTTGGTGTTTTCAATTCAGTTTCTATATTTAAGGAATTTCACTTTATCAACGTATCATCTTATCACGTGAATAACTTGCTTGCTTATCTAAACTATCTATTTGCTATCCAGTTGTTTGTGTCCAAAGATGATGATTGTAATTCATAAAATTTTACATTTTAGGTGAAATTGGTAGAATCGGGTCAGGTTTATGAAAAGAGCAGATTTTCTTTTTACATTTTCAGTTAATTTGTCATATTGTTTCATACTGGTTCAATCATAAGGTATCTGATACCTAAACTTGAAGCAAAATAAGTTCAAGTAGTTTGTTCCTGTTGCTTTGTTGCCATAATTTCATTGTTTATTTTGTCCAAGTAATTACATTTACTTGTACACAGTGGATTGGCTGCCCAAAGAACACTGCTCGAGTCATAATTTCTGTGAAAAGGATGGGCGAACTTGATATCAAGCCATTCGTGGAAGCAGCTAAGAGAAAATTTTCTGATGAAATGAATGAGAAAGCAGTAACTAAGAGAGAATTTTCAGAGAAAGTGCAAATGAAAGCAATCGAGTGGTGCTCAAAGTGGGATGACTATGTTAAGGATCCAAGCTGGCATCCGTTCAAAGTTGTAACGGACAAAGAAGGGAACTCCAAGGTACAATGACTTCACGAATTATGTTTGTTCCTTAAAATTAATATTTTTTCTCAGCTGTTATGTTATGACACACCTTTGGATATATTTATCCCCTAAAACATATAATGCACCATTTCTTAATAATTAGAAAGCATGGTAATTGGTATTGGGTAGTGATCTATTTACTGGAAATTTGCTGGTGTTAGCACTTATTTGGCATGTTTGTTTCCCTGCTATGAGCTGTATGGACCATGATCTAATATATGTTAGATATATCACACAGGAAATTTTAGACGGAGAAGATAAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAGCTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTAGGTACCCAATACCAGAACTCTGGAATTTTAGAGAAGGAAGGAAGGCTTCCTTGAAGGAAGGTGTTTCCCATTTAATTAAACAATGGAAGTTAAACAAGGGAAAGAAAGCTTATTGA
Protein sequence

>MS.gene30971.t1

MYRKSEQARESDLEYYKRRYYEDLKDDYYKETLKISDSTFRCPFCYNKDYYSLSELLRHASRIVGDSGEAVKDVAKHSALEMYIESYGDKLTAVTIDNDKTPGVSIVNDKSVNLSIANEKSLIMNDAEGHLGNVNVDDDELFVWPWMVILKNIVTHIDPKSGKYVGKNHKKIKEELIMNGFHPLKVTTLWNFRGQTPFAVVQFGREWDGFHNAMKLERSFQAEHCGKRDYLALREQERGDRLFGWMARRDDYNFKDIVGKHLQGNGDLKTVSGKEAEDNRKARKLLSGLANTLKLKTEELEQTASKYDEVNVSLRKAMDQKEKMLEHFNKEISKMRQVEREYQEKVSKDHEKARLELEARRNELISREKDLQKREADNHNEKAKLYFEKKHNEMALEEQQKADEKMMYLAEEHKKEKEKLHKKIHDLERGLDAKQALELEIERLKGAFQVMNHIGETDIDEKKKLEEIKMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLIAWIGCPKNTARVIISVKRMGELDIKPFVEAAKRKFSDEMNEKAVTKREFSEKVQMKAIEWCSKWDDYVKDPSWHPFKVVTDKEGNSKEILDGEDKKLKSLKDEFGDEVHDAVATALKELNEYNPSGRYPIPELWNFREGRKASLKEGVSHLIKQWKLNKGKKAY