AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene052107

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052107.t1 MTR_2g097020 90.722 679 44 5 1 672 1 667 0.0 1206
MS.gene052107.t1 MTR_4g046643 80.909 660 114 4 1 655 1 653 0.0 1032
MS.gene052107.t1 MTR_2g097010 80.973 678 123 1 1 672 1 678 0.0 1029
MS.gene052107.t1 MTR_2g095400 79.794 678 90 5 1 672 1 637 0.0 1021
MS.gene052107.t1 MTR_2g097000 74.872 390 80 3 299 672 2 389 0.0 535
MS.gene052107.t1 MTR_3g067815 39.851 670 345 12 10 667 13 636 4.27e-156 465
MS.gene052107.t1 MTR_5g079940 38.496 665 359 17 21 671 492 1120 4.12e-137 430
MS.gene052107.t1 MTR_4g126200 73.764 263 53 3 414 672 3 253 2.19e-128 380
MS.gene052107.t1 MTR_4g006760 36.103 662 349 15 21 668 24 625 7.97e-119 369
MS.gene052107.t1 MTR_4g131350 36.921 669 351 16 16 671 72 682 1.78e-118 369
MS.gene052107.t1 MTR_4g125920 36.622 669 353 16 16 671 19 629 2.59e-117 365
MS.gene052107.t1 MTR_4g126180 77.391 115 26 0 300 414 3 117 4.70e-50 170
MS.gene052107.t1 MTR_3g067855 43.182 220 109 4 441 659 123 327 1.33e-45 166
MS.gene052107.t1 MTR_8g446460 56.618 136 50 3 9 138 107 239 5.82e-37 141
MS.gene052107.t1 MTR_3g067845 35.075 268 155 5 406 671 1 251 2.29e-34 132
MS.gene052107.t1 MTR_4g131310 26.115 471 249 14 16 471 19 405 1.16e-30 126
MS.gene052107.t1 MTR_4g131310 59.375 64 26 0 597 660 391 454 1.04e-17 86.7
MS.gene052107.t1 MTR_2g066850 65.882 85 24 3 2 84 66 147 7.12e-25 111
MS.gene052107.t1 MTR_2g075630 74.242 66 14 2 2 67 67 129 3.84e-24 102
MS.gene052107.t1 MTR_8g063010 61.905 63 21 2 18 80 57 116 3.30e-18 84.0
MS.gene052107.t1 MTR_3g067825 44.444 90 45 2 575 659 3 92 2.92e-16 75.9
MS.gene052107.t1 MTR_5g044360 60.000 50 18 2 25 74 76 123 3.11e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene052107.t1 AT1G13790 47.070 529 258 7 139 663 216 726 1.01e-142 434
MS.gene052107.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.57e-11 66.2
MS.gene052107.t1 AT1G13790 47.070 529 258 7 139 663 216 726 1.01e-142 434
MS.gene052107.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.57e-11 66.2
MS.gene052107.t1 AT3G12550 36.241 665 370 13 13 663 5 629 4.45e-119 369
MS.gene052107.t1 AT3G12550 36.186 666 370 14 13 663 5 630 1.78e-117 365
MS.gene052107.t1 AT3G12550 36.186 666 370 14 13 663 5 630 1.78e-117 365
MS.gene052107.t1 AT3G12550 36.186 666 370 14 13 663 5 630 1.78e-117 365
MS.gene052107.t1 AT3G48670 35.312 674 372 14 13 671 21 645 2.24e-117 365
MS.gene052107.t1 AT3G48670 35.312 674 372 14 13 671 21 645 2.24e-117 365
MS.gene052107.t1 AT3G48670 35.312 674 372 14 13 671 21 645 2.24e-117 365
MS.gene052107.t1 AT1G15910 34.269 677 364 15 16 671 18 634 5.60e-110 346
MS.gene052107.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.37e-105 332
MS.gene052107.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.37e-105 332
MS.gene052107.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.37e-105 332
MS.gene052107.t1 AT4G00380 33.183 666 364 14 15 659 18 623 8.94e-104 330
MS.gene052107.t1 AT4G00380 33.183 666 364 14 15 659 18 623 8.94e-104 330
MS.gene052107.t1 AT5G59390 36.581 544 306 10 133 661 25 544 2.10e-103 326
MS.gene052107.t1 AT5G59390 36.581 544 306 10 133 661 25 544 2.10e-103 326
MS.gene052107.t1 AT1G80790 35.451 677 356 16 15 671 19 634 5.45e-103 327
MS.gene052107.t1 AT1G80790 35.451 677 356 16 15 671 19 634 5.45e-103 327
MS.gene052107.t1 AT4G00380 36.313 537 293 9 141 659 90 595 4.95e-101 322
MS.gene052107.t1 AT4G01180 36.147 545 296 10 137 661 27 539 3.09e-97 310
MS.gene052107.t1 AT3G12550 33.618 586 335 13 16 587 8 553 8.30e-86 281
MS.gene052107.t1 AT4G01780 32.043 465 209 10 209 671 111 470 1.64e-58 205
MS.gene052107.t1 AT1G80790 31.034 464 253 13 15 458 19 435 1.38e-55 197
MS.gene052107.t1 AT3G29375 42.857 210 98 5 462 670 38 226 8.27e-42 152
MS.gene052107.t1 AT3G29375 42.857 210 98 5 462 670 161 349 1.38e-39 149
MS.gene052107.t1 AT3G29375 38.095 126 59 3 462 587 38 144 5.41e-15 73.9
MS.gene052107.t1 AT2G16490 40.000 65 39 0 596 660 74 138 7.12e-12 65.1

Find 158 sgRNAs with CRISPR-Local

Find 251 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCCATTGTTTAATTAAA+TGG 0.065652 2.3:+5683633 None:intergenic
TTCCTCAGTCTTCAGCTTTA+AGG 0.090360 2.3:+5686288 None:intergenic
GGGGACTTGAAAACTGTTTC+TGG 0.148020 2.3:-5686367 MS.gene052107:CDS
ATGACTCGAGCAGTGTTCTT+TGG 0.279903 2.3:+5684326 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.283852 2.3:-5686194 MS.gene052107:CDS
TATAGTTGGCAAACACCTTC+AGG 0.289693 2.3:-5686395 MS.gene052107:CDS
GGAAAAGGAAGAGGAATTAG+AGG 0.297864 2.3:-5685140 MS.gene052107:CDS
CCCTTTGCAGTTGTTCAGTT+TGG 0.303743 2.3:-5686574 MS.gene052107:CDS
GAGGGATTACTTGGCTTTAC+GGG 0.324290 2.3:-5686482 MS.gene052107:CDS
GGCAAACACCTTCAGGGAAA+TGG 0.327163 2.3:-5686388 MS.gene052107:CDS
GAGCGGGGAGATAGACTCTT+TGG 0.328386 2.3:-5686454 MS.gene052107:CDS
CCTTGTAGTAATCATCCTTC+AGG 0.329123 2.3:+5687094 None:intergenic
AAGGCTGAAAGGAGCTTTCC+AGG 0.329972 2.3:-5685233 MS.gene052107:CDS
TCAACAAACTCTGGTTGTTC+AGG 0.333719 2.3:-5685104 MS.gene052107:CDS
ACTACCCTTTGGAACTTTAG+AGG 0.338798 2.3:-5686604 MS.gene052107:CDS
CTTCCATTGTTTAATTAAAT+GGG 0.340209 2.3:+5683634 None:intergenic
AGTCTTCAGCTTTAAGGTAT+TGG 0.341440 2.3:+5686294 None:intergenic
AATTCCAGAGTTCTGGTATT+GGG 0.344766 2.3:+5683696 None:intergenic
TGCTAAACAGGCATTGGAAT+TGG 0.345449 2.3:-5685263 MS.gene052107:CDS
TTTGATCCATCGCTTTCCTT+AGG 0.347229 2.3:+5686224 None:intergenic
TCTCTAAAATTCCAGAGTTC+TGG 0.347547 2.3:+5683689 None:intergenic
GGCTTTACGGGAGCAGGAGC+GGG 0.350376 2.3:-5686470 MS.gene052107:CDS
AAAATTGGAGGAAATCAAAA+TGG 0.350809 2.3:-5685170 MS.gene052107:CDS
GAATGATGCTGAGGGTCATT+TGG 0.358140 2.3:-5686791 MS.gene052107:CDS
ACCTGAGTCACCCACAATTC+TGG 0.361313 2.3:+5686981 None:intergenic
AAAGCTGAAGACTGAGGAAT+TGG 0.361410 2.3:-5686284 MS.gene052107:CDS
CAAAGGGTAGTAACTTTCAA+TGG 0.373028 2.3:+5686616 None:intergenic
AGAGGGATTACTTGGCTTTA+CGG 0.374808 2.3:-5686483 MS.gene052107:CDS
ATGCTTGAACATTTCAATAA+GGG 0.377132 2.3:-5686193 MS.gene052107:intron
GCAAACACCTTCAGGGAAAT+GGG 0.378780 2.3:-5686387 MS.gene052107:CDS
CATTGAAAGTTACTACCCTT+TGG 0.387447 2.3:-5686615 MS.gene052107:CDS
ACAAGCTCGTGAGTCTGATT+TGG 0.387571 2.3:-5687145 MS.gene052107:CDS
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 2.3:-5683787 MS.gene052107:CDS
TGACTCGAGCAGTGTTCTTT+GGG 0.389447 2.3:+5684327 None:intergenic
CTCCAATGTGATTCATTACC+TGG 0.402190 2.3:+5685215 None:intergenic
GAGAGGACTTGATGCTAAAC+AGG 0.402921 2.3:-5685275 MS.gene052107:CDS
GGAAAGAAGCTGAGGACAAT+AGG 0.403031 2.3:-5686345 MS.gene052107:CDS
GGAAGAGGAATTAGAGGGTG+TGG 0.409930 2.3:-5685134 MS.gene052107:CDS
TTGATCCATCGCTTTCCTTA+GGG 0.410024 2.3:+5686225 None:intergenic
CTCTTAGCTGCTTCCACGAA+TGG 0.415838 2.3:+5684266 None:intergenic
CTGTGGTAAGAGGGATTACT+TGG 0.417597 2.3:-5686491 MS.gene052107:CDS
ATGGGAAACACCTTCCTTCA+AGG 0.418880 2.3:+5683652 None:intergenic
CCGAGCTTCCAGTTCCAGCC+TGG 0.420885 2.3:+5685903 None:intergenic
GAGGAAGCTTCTCTCTGGTT+TGG 0.422362 2.3:-5686317 MS.gene052107:CDS
GGGACTTGAAAACTGTTTCT+GGG 0.423117 2.3:-5686366 MS.gene052107:CDS
TATAATTTCAAAGATATAGT+TGG 0.424336 2.3:-5686409 MS.gene052107:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 2.3:-5683788 MS.gene052107:CDS
CAAAATGGAGCTGCAGGAAA+AGG 0.431336 2.3:-5685155 MS.gene052107:CDS
TTACTTGGCTTTACGGGAGC+AGG 0.431347 2.3:-5686476 MS.gene052107:CDS
GTACCAGGAGAAAGTATCTA+AGG 0.432366 2.3:-5685938 MS.gene052107:CDS
AAATTCCAGAGTTCTGGTAT+TGG 0.450982 2.3:+5683695 None:intergenic
GGAAATCAAAATGGAGCTGC+AGG 0.455953 2.3:-5685161 MS.gene052107:CDS
AATGATGCTGAGGGTCATTT+GGG 0.461869 2.3:-5686790 MS.gene052107:CDS
TTTCTTCTCAAAATATAGCT+TGG 0.463871 2.3:+5685813 None:intergenic
ATGATGATGAGTTGTTTGTA+TGG 0.467760 2.3:-5686753 MS.gene052107:CDS
AAGCAGAGCACTGTGGTAAG+AGG 0.475875 2.3:-5686501 MS.gene052107:CDS
TCAAGTCCCCATTTCCCTGA+AGG 0.479524 2.3:+5686380 None:intergenic
AGGAGGAGCTGATCATGAAC+GGG 0.480433 2.3:-5686645 MS.gene052107:CDS
GCAGGTTGAACGCGAGTACC+AGG 0.481691 2.3:-5685953 MS.gene052107:CDS
TGGCTTTACGGGAGCAGGAG+CGG 0.481924 2.3:-5686471 MS.gene052107:CDS
CCAAACTGAACAACTGCAAA+GGG 0.483115 2.3:+5686574 None:intergenic
CATAATTTCTGTGAAAAGGA+TGG 0.486804 2.3:-5684306 MS.gene052107:CDS
AGATAGACTCTTTGGGTGGA+TGG 0.488205 2.3:-5686446 MS.gene052107:CDS
AAAGGGTAGTAACTTTCAAT+GGG 0.491933 2.3:+5686617 None:intergenic
AAGGAAAGCGATGGATCAAA+AGG 0.493646 2.3:-5686221 MS.gene052107:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 2.3:-5683780 MS.gene052107:CDS
TTTACTTGTACACAGTGGAT+TGG 0.502307 2.3:-5684353 MS.gene052107:intron
TTGTCCGTTACAACTTTGAA+CGG 0.502338 2.3:+5684119 None:intergenic
AGCGGGGAGATAGACTCTTT+GGG 0.503541 2.3:-5686453 MS.gene052107:CDS
AAAGCGAGGAAGCTTCTCTC+TGG 0.506331 2.3:-5686322 MS.gene052107:CDS
GAGTCATAATTTCTGTGAAA+AGG 0.512368 2.3:-5684310 MS.gene052107:CDS
ACTTGATGCTAAACAGGCAT+TGG 0.514013 2.3:-5685269 MS.gene052107:CDS
ACTTGATATCAAGCCATTCG+TGG 0.514781 2.3:-5684279 MS.gene052107:CDS
ATGAGTTGTTTGTATGGCCA+TGG 0.517649 2.3:-5686747 MS.gene052107:CDS
AGGAAGGAAGGCTTCCTTGA+AGG 0.521328 2.3:-5683666 MS.gene052107:CDS
TGTTGCTAAGCATTCAGCTC+TGG 0.522198 2.3:-5686944 MS.gene052107:CDS
AAAGTTGTAACGGACAAAGA+AGG 0.523153 2.3:-5684113 MS.gene052107:CDS
CGAACTTATTTCCCGTGAGA+AGG 0.523382 2.3:-5685875 MS.gene052107:CDS
GGTATTGGGTACCTACCACT+AGG 0.523917 2.3:+5683710 None:intergenic
GGAAGATCTTCAACAAACTC+TGG 0.525747 2.3:-5685113 MS.gene052107:CDS
TAGCATCAAGTCCTCTCTCC+AGG 0.527448 2.3:+5685281 None:intergenic
CATTGGAATTGGAGATAGAA+AGG 0.527648 2.3:-5685252 MS.gene052107:CDS
TTGGATGTTGCAGAAAGAAA+AGG 0.529965 2.3:-5685329 MS.gene052107:intron
GGCATTAGAAGAGCAACAAA+AGG 0.535693 2.3:-5685467 MS.gene052107:CDS
TAATCCTTGTTGTAGCAAAA+CGG 0.536850 2.3:+5687036 None:intergenic
TCCAGAATTGTGGGTGACTC+AGG 0.538417 2.3:-5686982 MS.gene052107:CDS
TAGTATTGTTAATGATAAGT+CGG 0.539521 2.3:-5686851 MS.gene052107:CDS
GTACTTGGCAGAAGAACATA+AGG 0.541395 2.3:-5685428 MS.gene052107:intron
GCTTTACGGGAGCAGGAGCG+GGG 0.541512 2.3:-5686469 MS.gene052107:CDS
ATAGTTGGCAAACACCTTCA+GGG 0.546668 2.3:-5686394 MS.gene052107:CDS
CAGTTTGGAAGAGAGTGGGA+TGG 0.548016 2.3:-5686559 MS.gene052107:CDS
ACTTTGAACGGATGCCAGCT+TGG 0.548798 2.3:+5684131 None:intergenic
AAAGTGGGATGACTATGTTA+AGG 0.550233 2.3:-5684156 MS.gene052107:CDS
AGAGATCAGCAAGATGCGGC+AGG 0.552419 2.3:-5685971 MS.gene052107:CDS
TTTGTCCTCTAAAGTTCCAA+AGG 0.553420 2.3:+5686599 None:intergenic
TGTTCAGTTTGGAAGAGAGT+GGG 0.554707 2.3:-5686563 MS.gene052107:CDS
TGCAGTAGCTACAGCTCTGA+AGG 0.557138 2.3:-5683750 MS.gene052107:CDS
CCAGGCTGGAACTGGAAGCT+CGG 0.558629 2.3:-5685903 MS.gene052107:CDS
CCTGAAGGATGATTACTACA+AGG 0.560609 2.3:-5687094 MS.gene052107:CDS
GATCCTTAGATACTTTCTCC+TGG 0.560678 2.3:+5685935 None:intergenic
AGCAGAGCACTGTGGTAAGA+GGG 0.561293 2.3:-5686500 MS.gene052107:CDS
TCCAAACTGAACAACTGCAA+AGG 0.564795 2.3:+5686573 None:intergenic
TTGTTCAGTTTGGAAGAGAG+TGG 0.565319 2.3:-5686564 MS.gene052107:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.567235 2.3:-5684305 MS.gene052107:CDS
AAGGAGGAGCTGATCATGAA+CGG 0.571820 2.3:-5686646 MS.gene052107:CDS
TTGTCCTCTAAAGTTCCAAA+GGG 0.573827 2.3:+5686600 None:intergenic
AAGGGAAAGAAAGCTTATTG+AGG 0.581176 2.3:-5683605 None:intergenic
GGTACCCAATACCAGAACTC+TGG 0.581859 2.3:-5683700 MS.gene052107:CDS
CAATCGAGTGGTGCTCAAAG+TGG 0.583300 2.3:-5684172 MS.gene052107:CDS
TTTCCCATTTAATTAAACAA+TGG 0.583512 2.3:-5683637 MS.gene052107:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.585994 2.3:-5685149 MS.gene052107:CDS
AATCGAGTGGTGCTCAAAGT+GGG 0.588592 2.3:-5684171 MS.gene052107:CDS
AAAATTCATGACCTGGAGAG+AGG 0.591924 2.3:-5685292 MS.gene052107:CDS
AAGTTGTAACGGACAAAGAA+GGG 0.592579 2.3:-5684112 MS.gene052107:CDS
GTATTGGGTACCTACCACTA+GGG 0.598398 2.3:+5683711 None:intergenic
GAGACATGCATCCAGAATTG+TGG 0.598602 2.3:-5686992 MS.gene052107:CDS
ATTGATAATGATAAGACCCC+TGG 0.598967 2.3:-5686877 MS.gene052107:CDS
GCAAAACGGACAGCGAAACG+TGG 0.601097 2.3:+5687050 None:intergenic
ACTTATTATGAATGATGCTG+AGG 0.601843 2.3:-5686800 MS.gene052107:CDS
TTCCAGGTAATGAATCACAT+TGG 0.602846 2.3:-5685217 MS.gene052107:CDS
TTGTTGTTTACAGAATGAGA+TGG 0.606515 2.3:-5685488 MS.gene052107:intron
TCACAAGAAAATTCATGACC+TGG 0.607531 2.3:-5685299 MS.gene052107:CDS
TCATTAACAATACTAACACC+AGG 0.607787 2.3:+5686859 None:intergenic
GCTTCTGCAGATCCTTCTCA+CGG 0.608508 2.3:+5685863 None:intergenic
AGGAAGGCTTCCTTGAAGGA+AGG 0.613280 2.3:-5683662 MS.gene052107:CDS
GCATCCGTTCAAAGTTGTAA+CGG 0.615867 2.3:-5684123 MS.gene052107:CDS
AGACATGCATCCAGAATTGT+GGG 0.616586 2.3:-5686991 MS.gene052107:CDS
TAGATATTATGAAGACCTGA+AGG 0.618566 2.3:-5687109 MS.gene052107:CDS
GTTGTTTGTATGGCCATGGA+TGG 0.618975 2.3:-5686743 MS.gene052107:CDS
ATGAGGTGAATGTGTCCCTA+AGG 0.619227 2.3:-5686240 MS.gene052107:CDS
TGTGTCCCTAAGGAAAGCGA+TGG 0.619461 2.3:-5686230 MS.gene052107:CDS
TTGGAGATAGAAAGGCTGAA+AGG 0.620293 2.3:-5685244 MS.gene052107:CDS
CTTCTGCAGATCCTTCTCAC+GGG 0.621177 2.3:+5685864 None:intergenic
GAAAAGGAAGAGGAATTAGA+GGG 0.621506 2.3:-5685139 MS.gene052107:CDS
CTGAGGACAATAGGAAAGCG+AGG 0.623390 2.3:-5686336 MS.gene052107:CDS
TGTTTCTGGGAAAGAAGCTG+AGG 0.631054 2.3:-5686353 MS.gene052107:CDS
CTTATTATGAATGATGCTGA+GGG 0.632417 2.3:-5686799 MS.gene052107:CDS
TCTCTAACTTCATAGCATTG+TGG 0.639586 2.3:+5686533 None:intergenic
TAAACAATGGAAGTTAAACA+AGG 0.639594 2.3:-5683624 MS.gene052107:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 2.3:-5683786 MS.gene052107:CDS
TGCAAATGAAAGCAATCGAG+TGG 0.643737 2.3:-5684184 MS.gene052107:CDS
CATTAGAGATCAGCAAGATG+CGG 0.643905 2.3:-5685975 MS.gene052107:intron
ATGAGTACAACCCTAGTGGT+AGG 0.644559 2.3:-5683721 MS.gene052107:CDS
ACTATGTTAAGGATCCAAGC+TGG 0.645868 2.3:-5684145 MS.gene052107:CDS
GGCTGGAACTGGAAGCTCGG+AGG 0.651348 2.3:-5685900 MS.gene052107:CDS
CATTAACAATACTAACACCA+GGG 0.651371 2.3:+5686860 None:intergenic
AATTGTGGGTGACTCAGGTG+AGG 0.654445 2.3:-5686977 MS.gene052107:CDS
ACAATGCTATGAAGTTAGAG+AGG 0.654487 2.3:-5686531 MS.gene052107:CDS
TACCTTAAAGCTGAAGACTG+AGG 0.656236 2.3:-5686290 MS.gene052107:CDS
GACAGCAAGCAAGTATGATG+AGG 0.660335 2.3:-5686257 MS.gene052107:CDS
AAACAATGGAAGTTAAACAA+GGG 0.663429 2.3:-5683623 MS.gene052107:CDS
GAAATGTATATTGAAAGCTA+TGG 0.677454 2.3:-5686922 MS.gene052107:CDS
CAAACACCTTCAGGGAAATG+GGG 0.680457 2.3:-5686386 MS.gene052107:CDS
GGACAAAGAAGGGAACTCCA+AGG 0.695584 2.3:-5684102 MS.gene052107:intron
TTAAATGAGTACAACCCTAG+TGG 0.707957 2.3:-5683725 MS.gene052107:CDS
ATTAACAATACTAACACCAG+GGG 0.713244 2.3:+5686861 None:intergenic
GGGGAGATAGACTCTTTGGG+TGG 0.722759 2.3:-5686450 MS.gene052107:CDS
AGCTTTCAAGCAGAGCACTG+TGG 0.771291 2.3:-5686508 MS.gene052107:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAATCATAAAAAAATTA+AGG - chr2.3:5684104-5684123 MS.gene052107:CDS 10.0%
!!! GAGAAAAAATATTAATTTTA+AGG + chr2.3:5686721-5686740 None:intergenic 10.0%
!!! TTCATAAAATTTTACATTTT+AGG - chr2.3:5686194-5686213 MS.gene052107:CDS 10.0%
!!! TTTGATTTTTTAATATTTCA+TGG - chr2.3:5684746-5684765 MS.gene052107:intron 10.0%
!! AAATCATAAAAAAATTAAGG+AGG - chr2.3:5684107-5684126 MS.gene052107:CDS 15.0%
!! AAGAAACATGTAATATATTT+CGG - chr2.3:5684973-5684992 MS.gene052107:intron 15.0%
!! ATAAGTTATTGAAAAATAAG+AGG + chr2.3:5685237-5685256 None:intergenic 15.0%
!! CAAAATAAACAATGAAATTA+TGG + chr2.3:5686382-5686401 None:intergenic 15.0%
!! TAAGTTATTGAAAAATAAGA+GGG + chr2.3:5685236-5685255 None:intergenic 15.0%
!! TATAATTTCAAAGATATAGT+TGG - chr2.3:5684360-5684379 MS.gene052107:intron 15.0%
!!! AAATTTGCTTCTTTTAAAAA+TGG - chr2.3:5685132-5685151 MS.gene052107:CDS 15.0%
!!! ATGTTAATTTTAATGTCTAA+TGG - chr2.3:5685762-5685781 MS.gene052107:intron 15.0%
!!! TGAATTGTTTTAATTGATAT+TGG - chr2.3:5684616-5684635 MS.gene052107:intron 15.0%
!! AAATTAACATTTATATGCTG+AGG + chr2.3:5685752-5685771 None:intergenic 20.0%
!! AATTGAAAACACCAAAAATT+TGG + chr2.3:5686050-5686069 None:intergenic 20.0%
!! ACTTCCATTGTTTAATTAAA+TGG + chr2.3:5687139-5687158 None:intergenic 20.0%
!! AGAAACATGTAATATATTTC+GGG - chr2.3:5684974-5684993 MS.gene052107:intron 20.0%
!! ATCTAACATATATTAGATCA+TGG + chr2.3:5686920-5686939 None:intergenic 20.0%
!! CAATTCAGTTTCTATATTTA+AGG - chr2.3:5686065-5686084 MS.gene052107:intron 20.0%
!! CTTCCATTGTTTAATTAAAT+GGG + chr2.3:5687138-5687157 None:intergenic 20.0%
!! GCTTTCTAATTATTAAGAAA+TGG + chr2.3:5686801-5686820 None:intergenic 20.0%
!! TACAAGTAAATGTAATTACT+TGG + chr2.3:5686406-5686425 None:intergenic 20.0%
!! TAGTATTGTTAATGATAAGT+CGG - chr2.3:5683918-5683937 MS.gene052107:intron 20.0%
!! TATAGATGAGAAGAAAAAAT+TGG - chr2.3:5685584-5685603 MS.gene052107:intron 20.0%
!! TTCTTAATAATTAGAAAGCA+TGG - chr2.3:5686802-5686821 MS.gene052107:CDS 20.0%
!! TTTCCCATTTAATTAAACAA+TGG - chr2.3:5687132-5687151 MS.gene052107:CDS 20.0%
!!! TACTACTATATCTATCATTT+TGG - chr2.3:5684680-5684699 MS.gene052107:intron 20.0%
!!! TTTTACATTTTAGGTGAAAT+TGG - chr2.3:5686203-5686222 MS.gene052107:CDS 20.0%
! AAAACACCAAAAATTTGGAT+TGG + chr2.3:5686045-5686064 None:intergenic 25.0%
! AAAATTGGAGGAAATCAAAA+TGG - chr2.3:5685599-5685618 MS.gene052107:intron 25.0%
! AAACAATGGAAGTTAAACAA+GGG - chr2.3:5687146-5687165 MS.gene052107:CDS 25.0%
! AACTAAAAACTGTAGGTAAT+AGG + chr2.3:5685382-5685401 None:intergenic 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr2.3:5686464-5686483 MS.gene052107:CDS 25.0%
! ATATGTTAGATATATCACAC+AGG - chr2.3:5686929-5686948 MS.gene052107:CDS 25.0%
! ATGCTTGAACATTTCAATAA+GGG - chr2.3:5684576-5684595 MS.gene052107:intron 25.0%
! GAAATGTATATTGAAAGCTA+TGG - chr2.3:5683847-5683866 MS.gene052107:intron 25.0%
! TAAAAAGCTGAAAAGTTTGA+AGG - chr2.3:5686971-5686990 MS.gene052107:CDS 25.0%
! TAAAACTTAAGCAGAAATGT+AGG - chr2.3:5685869-5685888 MS.gene052107:CDS 25.0%
! TAAACAATGGAAGTTAAACA+AGG - chr2.3:5687145-5687164 MS.gene052107:CDS 25.0%
! TATTGAAAAATAAGAGGGAT+TGG + chr2.3:5685231-5685250 None:intergenic 25.0%
! TGAATTACAATCATCATCTT+TGG + chr2.3:5686178-5686197 None:intergenic 25.0%
! TGATGAAAAAATGATGTACT+TGG - chr2.3:5685326-5685345 MS.gene052107:intron 25.0%
! TTGTTCACATGTATTTACAA+CGG - chr2.3:5686019-5686038 MS.gene052107:intron 25.0%
! TTTCTTCTCAAAATATAGCT+TGG + chr2.3:5684959-5684978 None:intergenic 25.0%
! TTTGAAAGTGATCAATTTAC+AGG - chr2.3:5685103-5685122 MS.gene052107:CDS 25.0%
! TTTGTCATATTGTTTCATAC+TGG - chr2.3:5686282-5686301 MS.gene052107:CDS 25.0%
!! AACTAATCTTTTACAAAGTC+AGG - chr2.3:5685815-5685834 MS.gene052107:CDS 25.0%
!! AATGGTGCATTATATGTTTT+AGG + chr2.3:5686783-5686802 None:intergenic 25.0%
!! ATACAGCTATTAACTTTTTG+CGG + chr2.3:5685722-5685741 None:intergenic 25.0%
!! ATGGTGCATTATATGTTTTA+GGG + chr2.3:5686782-5686801 None:intergenic 25.0%
!! ATTTCTGCTTAAGTTTTACA+AGG + chr2.3:5685867-5685886 None:intergenic 25.0%
!! TAATTAGAAAGCATGGTAAT+TGG - chr2.3:5686809-5686828 MS.gene052107:CDS 25.0%
!!! AATTATGTTTTGAGAACTCT+TGG - chr2.3:5685417-5685436 MS.gene052107:intron 25.0%
!!! ACTTATTTTGCTTCAAGTTT+AGG + chr2.3:5686330-5686349 None:intergenic 25.0%
!!! GAAATCTTATTTAAGTTGCT+TGG - chr2.3:5685986-5686005 MS.gene052107:intron 25.0%
AAAAGTTTGAAGGATGAGTT+CGG - chr2.3:5686981-5687000 MS.gene052107:CDS 30.0%
AAAGCATGGTAATTGGTATT+GGG - chr2.3:5686816-5686835 MS.gene052107:CDS 30.0%
AAAGGGTAGTAACTTTCAAT+GGG + chr2.3:5684155-5684174 None:intergenic 30.0%
ACTTATTATGAATGATGCTG+AGG - chr2.3:5683969-5683988 MS.gene052107:intron 30.0%
AGATGAGAAGAAAAAATTGG+AGG - chr2.3:5685587-5685606 MS.gene052107:intron 30.0%
ATTAACAATACTAACACCAG+GGG + chr2.3:5683911-5683930 None:intergenic 30.0%
CATAATTTCTGTGAAAAGGA+TGG - chr2.3:5686463-5686482 MS.gene052107:CDS 30.0%
CATTAACAATACTAACACCA+GGG + chr2.3:5683912-5683931 None:intergenic 30.0%
CTTATTATGAATGATGCTGA+GGG - chr2.3:5683970-5683989 MS.gene052107:intron 30.0%
GAGTCATAATTTCTGTGAAA+AGG - chr2.3:5686459-5686478 MS.gene052107:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG - chr2.3:5684575-5684594 MS.gene052107:intron 30.0%
TAGATATTATGAAGACCTGA+AGG - chr2.3:5683660-5683679 MS.gene052107:CDS 30.0%
TAGGGGATAAATATATCCAA+AGG + chr2.3:5686764-5686783 None:intergenic 30.0%
TCATTAACAATACTAACACC+AGG + chr2.3:5683913-5683932 None:intergenic 30.0%
TCTATTTACTGGAAATTTGC+TGG - chr2.3:5686845-5686864 MS.gene052107:CDS 30.0%
TGATTTGAATGTTTGCAAAC+AGG + chr2.3:5685959-5685978 None:intergenic 30.0%
TTACATTTACTTGTACACAG+TGG - chr2.3:5686411-5686430 MS.gene052107:CDS 30.0%
TTAGGTGAAATTGGTAGAAT+CGG - chr2.3:5686212-5686231 MS.gene052107:CDS 30.0%
! ATCACACAGGAAATTTTAGA+CGG - chr2.3:5686942-5686961 MS.gene052107:CDS 30.0%
! ATGATGATGAGTTGTTTGTA+TGG - chr2.3:5684016-5684035 MS.gene052107:intron 30.0%
! CAAAAAGTGGAAAGTATGTT+GGG - chr2.3:5684082-5684101 MS.gene052107:intron 30.0%
! GTTCTGTTTCTTTGATTTAG+AGG - chr2.3:5684640-5684659 MS.gene052107:intron 30.0%
! TAATCCTTGTTGTAGCAAAA+CGG + chr2.3:5683736-5683755 None:intergenic 30.0%
! TACAGCTATTAACTTTTTGC+GGG + chr2.3:5685721-5685740 None:intergenic 30.0%
!! CTAACAACACTTTTTGTGAT+TGG + chr2.3:5685159-5685178 None:intergenic 30.0%
!! TGGTGCATTATATGTTTTAG+GGG + chr2.3:5686781-5686800 None:intergenic 30.0%
!! TTCATACTGGTTCAATCATA+AGG - chr2.3:5686295-5686314 MS.gene052107:CDS 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG - chr2.3:5685281-5685300 MS.gene052107:CDS 30.0%
!! TTTTTCAAAATCACCATCCA+TGG + chr2.3:5684042-5684061 None:intergenic 30.0%
!!! CAACATACTTTCCACTTTTT+GGG + chr2.3:5684083-5684102 None:intergenic 30.0%
AAAGTGGGATGACTATGTTA+AGG - chr2.3:5686613-5686632 MS.gene052107:CDS 35.0%
AAAGTTTGAAGGATGAGTTC+GGG - chr2.3:5686982-5687001 MS.gene052107:CDS 35.0%
AATTATGGCAACAAAGCAAC+AGG + chr2.3:5686367-5686386 None:intergenic 35.0%
ACAATGCTATGAAGTTAGAG+AGG - chr2.3:5684238-5684257 MS.gene052107:CDS 35.0%
ACTCATATTGACCCAAAAAG+TGG - chr2.3:5684069-5684088 MS.gene052107:intron 35.0%
ATTTGACACAGAAGACCAAA+TGG + chr2.3:5685200-5685219 None:intergenic 35.0%
CAAAGGGTAGTAACTTTCAA+TGG + chr2.3:5684156-5684175 None:intergenic 35.0%
CATTGAAAGTTACTACCCTT+TGG - chr2.3:5684154-5684173 MS.gene052107:CDS 35.0%
CATTGGAATTGGAGATAGAA+AGG - chr2.3:5685517-5685536 MS.gene052107:intron 35.0%
GAAAAGGAAGAGGAATTAGA+GGG - chr2.3:5685630-5685649 MS.gene052107:intron 35.0%
GATTTAGAGGAGAAACATTC+TGG - chr2.3:5684653-5684672 MS.gene052107:intron 35.0%
GTGTTCATGAGAAGGTTAAA+AGG + chr2.3:5685041-5685060 None:intergenic 35.0%
GTTATGTTATGACACACCTT+TGG - chr2.3:5686745-5686764 MS.gene052107:CDS 35.0%
TAGGTGAAATTGGTAGAATC+GGG - chr2.3:5686213-5686232 MS.gene052107:CDS 35.0%
TCACAAGAAAATTCATGACC+TGG - chr2.3:5685470-5685489 MS.gene052107:CDS 35.0%
TCTCTAACTTCATAGCATTG+TGG + chr2.3:5684239-5684258 None:intergenic 35.0%
TTAAATGAGTACAACCCTAG+TGG - chr2.3:5687044-5687063 MS.gene052107:CDS 35.0%
TTCCAGGTAATGAATCACAT+TGG - chr2.3:5685552-5685571 MS.gene052107:intron 35.0%
TTGGATGTTGCAGAAAGAAA+AGG - chr2.3:5685440-5685459 MS.gene052107:CDS 35.0%
TTGGGTAGTGATCTATTTAC+TGG - chr2.3:5686834-5686853 MS.gene052107:CDS 35.0%
TTGTCCGTTACAACTTTGAA+CGG + chr2.3:5686653-5686672 None:intergenic 35.0%
TTTACTTGTACACAGTGGAT+TGG - chr2.3:5686416-5686435 MS.gene052107:CDS 35.0%
! AAATTCCAGAGTTCTGGTAT+TGG + chr2.3:5687077-5687096 None:intergenic 35.0%
! AATTCCAGAGTTCTGGTATT+GGG + chr2.3:5687076-5687095 None:intergenic 35.0%
! ACAAAAGTGTGTTCATGAGA+AGG + chr2.3:5685049-5685068 None:intergenic 35.0%
! CATGAACACACTTTTGTGAT+AGG - chr2.3:5685052-5685071 MS.gene052107:intron 35.0%
! CCAAAAAGTGGAAAGTATGT+TGG - chr2.3:5684081-5684100 MS.gene052107:intron 35.0%
! GAAAGCATGGTAATTGGTAT+TGG - chr2.3:5686815-5686834 MS.gene052107:CDS 35.0%
! GCTTACAGTCTGTTACATTT+TGG - chr2.3:5684707-5684726 MS.gene052107:intron 35.0%
!! AAAGTTGTAACGGACAAAGA+AGG - chr2.3:5686656-5686675 MS.gene052107:CDS 35.0%
!! AAGTTGTAACGGACAAAGAA+GGG - chr2.3:5686657-5686676 MS.gene052107:CDS 35.0%
!! AGTCTTCAGCTTTAAGGTAT+TGG + chr2.3:5684478-5684497 None:intergenic 35.0%
!! ATTGATAATGATAAGACCCC+TGG - chr2.3:5683892-5683911 MS.gene052107:intron 35.0%
!! CCAACATACTTTCCACTTTT+TGG + chr2.3:5684084-5684103 None:intergenic 35.0%
!! GAATTTTAGAGAAGGAAGGA+AGG - chr2.3:5687091-5687110 MS.gene052107:CDS 35.0%
!! TCTCTAAAATTCCAGAGTTC+TGG + chr2.3:5687083-5687102 None:intergenic 35.0%
!! TCTGGAATTTTAGAGAAGGA+AGG - chr2.3:5687087-5687106 MS.gene052107:CDS 35.0%
!! TTGTCCTCTAAAGTTCCAAA+GGG + chr2.3:5684172-5684191 None:intergenic 35.0%
!! TTTGTCCTCTAAAGTTCCAA+AGG + chr2.3:5684173-5684192 None:intergenic 35.0%
!!! ATGTTTTGAGAACTCTTGGT+TGG - chr2.3:5685421-5685440 MS.gene052107:intron 35.0%
!!! GAACTCTGGAATTTTAGAGA+AGG - chr2.3:5687083-5687102 MS.gene052107:CDS 35.0%
AAAATTCATGACCTGGAGAG+AGG - chr2.3:5685477-5685496 MS.gene052107:CDS 40.0%
AAAGCTGAAGACTGAGGAAT+TGG - chr2.3:5684485-5684504 MS.gene052107:intron 40.0%
AAGGAAAGCGATGGATCAAA+AGG - chr2.3:5684548-5684567 MS.gene052107:intron 40.0%
AAGTTTGAAGGATGAGTTCG+GGG - chr2.3:5686983-5687002 MS.gene052107:CDS 40.0%
AATGATGCTGAGGGTCATTT+GGG - chr2.3:5683979-5683998 MS.gene052107:intron 40.0%
ACTATGTTAAGGATCCAAGC+TGG - chr2.3:5686624-5686643 MS.gene052107:CDS 40.0%
ACTTGATATCAAGCCATTCG+TGG - chr2.3:5686490-5686509 MS.gene052107:CDS 40.0%
ACTTGATGCTAAACAGGCAT+TGG - chr2.3:5685500-5685519 MS.gene052107:intron 40.0%
AGACATGCATCCAGAATTGT+GGG - chr2.3:5683778-5683797 MS.gene052107:CDS 40.0%
ATAGTTGGCAAACACCTTCA+GGG - chr2.3:5684375-5684394 MS.gene052107:intron 40.0%
ATGAGTTGTTTGTATGGCCA+TGG - chr2.3:5684022-5684041 MS.gene052107:intron 40.0%
CATCTTTGGACACAAACAAC+TGG + chr2.3:5686164-5686183 None:intergenic 40.0%
CATTAGAGATCAGCAAGATG+CGG - chr2.3:5684794-5684813 MS.gene052107:intron 40.0%
CCAAACTGAACAACTGCAAA+GGG + chr2.3:5684198-5684217 None:intergenic 40.0%
CCTGAAGGATGATTACTACA+AGG - chr2.3:5683675-5683694 MS.gene052107:CDS 40.0%
CCTTGTAGTAATCATCCTTC+AGG + chr2.3:5683678-5683697 None:intergenic 40.0%
CTAAGGATCATGAAAAAGCC+AGG - chr2.3:5684848-5684867 MS.gene052107:intron 40.0%
CTCCAATGTGATTCATTACC+TGG + chr2.3:5685557-5685576 None:intergenic 40.0%
GATCCTTAGATACTTTCTCC+TGG + chr2.3:5684837-5684856 None:intergenic 40.0%
GCAGCTGAACTAAAAACTGT+AGG + chr2.3:5685389-5685408 None:intergenic 40.0%
GCATCCGTTCAAAGTTGTAA+CGG - chr2.3:5686646-5686665 MS.gene052107:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG - chr2.3:5685629-5685648 MS.gene052107:intron 40.0%
GGAAGATCTTCAACAAACTC+TGG - chr2.3:5685656-5685675 MS.gene052107:intron 40.0%
GGCATTAGAAGAGCAACAAA+AGG - chr2.3:5685302-5685321 MS.gene052107:CDS 40.0%
GTACTTGGCAGAAGAACATA+AGG - chr2.3:5685341-5685360 MS.gene052107:intron 40.0%
TACCTTAAAGCTGAAGACTG+AGG - chr2.3:5684479-5684498 MS.gene052107:intron 40.0%
TATAGTTGGCAAACACCTTC+AGG - chr2.3:5684374-5684393 MS.gene052107:intron 40.0%
TCAACAAACTCTGGTTGTTC+AGG - chr2.3:5685665-5685684 MS.gene052107:intron 40.0%
TCCAAACTGAACAACTGCAA+AGG + chr2.3:5684199-5684218 None:intergenic 40.0%
TGCAAATGAAAGCAATCGAG+TGG - chr2.3:5686585-5686604 MS.gene052107:CDS 40.0%
TGTTAGCATTCCTTGCTCTA+TGG - chr2.3:5685173-5685192 MS.gene052107:CDS 40.0%
TGTTCAGTTTGGAAGAGAGT+GGG - chr2.3:5684206-5684225 MS.gene052107:CDS 40.0%
TTCCTCAGTCTTCAGCTTTA+AGG + chr2.3:5684484-5684503 None:intergenic 40.0%
TTCGTGAAGTCATTGTACCT+TGG + chr2.3:5686687-5686706 None:intergenic 40.0%
TTGATCCATCGCTTTCCTTA+GGG + chr2.3:5684547-5684566 None:intergenic 40.0%
TTGGAGATAGAAAGGCTGAA+AGG - chr2.3:5685525-5685544 MS.gene052107:intron 40.0%
TTGTTCAGTTTGGAAGAGAG+TGG - chr2.3:5684205-5684224 MS.gene052107:CDS 40.0%
TTTGATCCATCGCTTTCCTT+AGG + chr2.3:5684548-5684567 None:intergenic 40.0%
! CAACGGCCAATCCAAATTTT+TGG - chr2.3:5686036-5686055 MS.gene052107:intron 40.0%
! GGGACTTGAAAACTGTTTCT+GGG - chr2.3:5684403-5684422 MS.gene052107:intron 40.0%
! TGCTGGTGTTAGCACTTATT+TGG - chr2.3:5686862-5686881 MS.gene052107:CDS 40.0%
!! ACTACCCTTTGGAACTTTAG+AGG - chr2.3:5684165-5684184 MS.gene052107:CDS 40.0%
!! AGAGGGATTACTTGGCTTTA+CGG - chr2.3:5684286-5684305 MS.gene052107:CDS 40.0%
!! CACGAGCTTGTTCTGATTTT+CGG + chr2.3:5683615-5683634 None:intergenic 40.0%
!! GTACCAGGAGAAAGTATCTA+AGG - chr2.3:5684831-5684850 MS.gene052107:intron 40.0%
!! TGCTAAACAGGCATTGGAAT+TGG - chr2.3:5685506-5685525 MS.gene052107:intron 40.0%
AAGGAGGAGCTGATCATGAA+CGG - chr2.3:5684123-5684142 MS.gene052107:CDS 45.0%
AATCGAGTGGTGCTCAAAGT+GGG - chr2.3:5686598-5686617 MS.gene052107:CDS 45.0%
ACAAGCTCGTGAGTCTGATT+TGG - chr2.3:5683624-5683643 MS.gene052107:CDS 45.0%
ACCAAATGGTCCATAGAGCA+AGG + chr2.3:5685186-5685205 None:intergenic 45.0%
AGATAGACTCTTTGGGTGGA+TGG - chr2.3:5684323-5684342 MS.gene052107:CDS 45.0%
ATGACTCGAGCAGTGTTCTT+TGG + chr2.3:5686446-5686465 None:intergenic 45.0%
ATGAGGTGAATGTGTCCCTA+AGG - chr2.3:5684529-5684548 MS.gene052107:intron 45.0%
ATGAGTACAACCCTAGTGGT+AGG - chr2.3:5687048-5687067 MS.gene052107:CDS 45.0%
ATGGGAAACACCTTCCTTCA+AGG + chr2.3:5687120-5687139 None:intergenic 45.0%
CAAAATGGAGCTGCAGGAAA+AGG - chr2.3:5685614-5685633 MS.gene052107:intron 45.0%
CAAACACCTTCAGGGAAATG+GGG - chr2.3:5684383-5684402 MS.gene052107:intron 45.0%
CCCTTTGCAGTTGTTCAGTT+TGG - chr2.3:5684195-5684214 MS.gene052107:CDS 45.0%
CGAACTTATTTCCCGTGAGA+AGG - chr2.3:5684894-5684913 MS.gene052107:intron 45.0%
CTGTGGTAAGAGGGATTACT+TGG - chr2.3:5684278-5684297 MS.gene052107:CDS 45.0%
GAAATTGGTAGAATCGGGTC+AGG - chr2.3:5686218-5686237 MS.gene052107:CDS 45.0%
GAATGATGCTGAGGGTCATT+TGG - chr2.3:5683978-5683997 MS.gene052107:intron 45.0%
GACAGCAAGCAAGTATGATG+AGG - chr2.3:5684512-5684531 MS.gene052107:intron 45.0%
GAGACATGCATCCAGAATTG+TGG - chr2.3:5683777-5683796 MS.gene052107:CDS 45.0%
GAGAGGACTTGATGCTAAAC+AGG - chr2.3:5685494-5685513 MS.gene052107:intron 45.0%
GCAAACACCTTCAGGGAAAT+GGG - chr2.3:5684382-5684401 MS.gene052107:intron 45.0%
GGAAAGAAGCTGAGGACAAT+AGG - chr2.3:5684424-5684443 MS.gene052107:intron 45.0%
GGAAATCAAAATGGAGCTGC+AGG - chr2.3:5685608-5685627 MS.gene052107:intron 45.0%
GGGGACTTGAAAACTGTTTC+TGG - chr2.3:5684402-5684421 MS.gene052107:intron 45.0%
GTATTGGGTACCTACCACTA+GGG + chr2.3:5687061-5687080 None:intergenic 45.0%
GTTGTTTGTATGGCCATGGA+TGG - chr2.3:5684026-5684045 MS.gene052107:intron 45.0%
TCCTTGCTCTATGGACCATT+TGG - chr2.3:5685182-5685201 MS.gene052107:CDS 45.0%
TGACTCGAGCAGTGTTCTTT+GGG + chr2.3:5686445-5686464 None:intergenic 45.0%
TGTTGCTAAGCATTCAGCTC+TGG - chr2.3:5683825-5683844 MS.gene052107:intron 45.0%
TTTCCCTGCTATGAGCTGTA+TGG - chr2.3:5686893-5686912 MS.gene052107:CDS 45.0%
! CTGTCCGTTTTGCTACAACA+AGG - chr2.3:5683729-5683748 MS.gene052107:CDS 45.0%
!! GAGGGATTACTTGGCTTTAC+GGG - chr2.3:5684287-5684306 MS.gene052107:CDS 45.0%
!! TGTTTCTGGGAAAGAAGCTG+AGG - chr2.3:5684416-5684435 MS.gene052107:intron 45.0%
AAAGCGAGGAAGCTTCTCTC+TGG - chr2.3:5684447-5684466 MS.gene052107:intron 50.0%
AAGGCTGAAAGGAGCTTTCC+AGG - chr2.3:5685536-5685555 MS.gene052107:intron 50.0%
AATTGTGGGTGACTCAGGTG+AGG - chr2.3:5683792-5683811 MS.gene052107:CDS 50.0%
ACCTGAGTCACCCACAATTC+TGG + chr2.3:5683791-5683810 None:intergenic 50.0%
ACTTTGAACGGATGCCAGCT+TGG + chr2.3:5686641-5686660 None:intergenic 50.0%
AGCGGGGAGATAGACTCTTT+GGG - chr2.3:5684316-5684335 MS.gene052107:CDS 50.0%
AGGAAGGAAGGCTTCCTTGA+AGG - chr2.3:5687103-5687122 MS.gene052107:CDS 50.0%
AGGAAGGCTTCCTTGAAGGA+AGG - chr2.3:5687107-5687126 MS.gene052107:CDS 50.0%
AGGAGGAGCTGATCATGAAC+GGG - chr2.3:5684124-5684143 MS.gene052107:CDS 50.0%
CAATCGAGTGGTGCTCAAAG+TGG - chr2.3:5686597-5686616 MS.gene052107:CDS 50.0%
CAGTTTGGAAGAGAGTGGGA+TGG - chr2.3:5684210-5684229 MS.gene052107:CDS 50.0%
CTCTTAGCTGCTTCCACGAA+TGG + chr2.3:5686506-5686525 None:intergenic 50.0%
CTGAGGACAATAGGAAAGCG+AGG - chr2.3:5684433-5684452 MS.gene052107:intron 50.0%
CTTCTGCAGATCCTTCTCAC+GGG + chr2.3:5684908-5684927 None:intergenic 50.0%
GAGGAAGCTTCTCTCTGGTT+TGG - chr2.3:5684452-5684471 MS.gene052107:intron 50.0%
GCTTCTGCAGATCCTTCTCA+CGG + chr2.3:5684909-5684928 None:intergenic 50.0%
GGAAGAGGAATTAGAGGGTG+TGG - chr2.3:5685635-5685654 MS.gene052107:intron 50.0%
GGACAAAGAAGGGAACTCCA+AGG - chr2.3:5686667-5686686 MS.gene052107:CDS 50.0%
GGATCATGAAAAAGCCAGGC+TGG - chr2.3:5684852-5684871 MS.gene052107:intron 50.0%
GGCAAACACCTTCAGGGAAA+TGG - chr2.3:5684381-5684400 MS.gene052107:intron 50.0%
GGTACCCAATACCAGAACTC+TGG - chr2.3:5687069-5687088 MS.gene052107:CDS 50.0%
GGTCCATACAGCTCATAGCA+GGG + chr2.3:5686899-5686918 None:intergenic 50.0%
TAGCATCAAGTCCTCTCTCC+AGG + chr2.3:5685491-5685510 None:intergenic 50.0%
TCAAGTCCCCATTTCCCTGA+AGG + chr2.3:5684392-5684411 None:intergenic 50.0%
TCCAGAATTGTGGGTGACTC+AGG - chr2.3:5683787-5683806 MS.gene052107:CDS 50.0%
TGAAAAAGCCAGGCTGGAAC+TGG - chr2.3:5684858-5684877 MS.gene052107:intron 50.0%
TGGTCCATACAGCTCATAGC+AGG + chr2.3:5686900-5686919 None:intergenic 50.0%
TGTGTCCCTAAGGAAAGCGA+TGG - chr2.3:5684539-5684558 MS.gene052107:intron 50.0%
! GGTATTGGGTACCTACCACT+AGG + chr2.3:5687062-5687081 None:intergenic 50.0%
! TGCAGTAGCTACAGCTCTGA+AGG - chr2.3:5687019-5687038 MS.gene052107:CDS 50.0%
!! AAGCAGAGCACTGTGGTAAG+AGG - chr2.3:5684268-5684287 MS.gene052107:CDS 50.0%
!! AGCAGAGCACTGTGGTAAGA+GGG - chr2.3:5684269-5684288 MS.gene052107:CDS 50.0%
!! AGCTTTCAAGCAGAGCACTG+TGG - chr2.3:5684261-5684280 MS.gene052107:CDS 50.0%
!! TTACTTGGCTTTACGGGAGC+AGG - chr2.3:5684293-5684312 MS.gene052107:CDS 50.0%
AGAGATCAGCAAGATGCGGC+AGG - chr2.3:5684798-5684817 MS.gene052107:intron 55.0%
GAAGGATGAGTTCGGGGATG+AGG - chr2.3:5686989-5687008 MS.gene052107:CDS 55.0%
GAGCGGGGAGATAGACTCTT+TGG - chr2.3:5684315-5684334 MS.gene052107:CDS 55.0%
GCAAAACGGACAGCGAAACG+TGG + chr2.3:5683722-5683741 None:intergenic 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG - chr2.3:5685620-5685639 MS.gene052107:intron 55.0%
GGGGAGATAGACTCTTTGGG+TGG - chr2.3:5684319-5684338 MS.gene052107:CDS 55.0%
CCAGGCTGGAACTGGAAGCT+CGG - chr2.3:5684866-5684885 MS.gene052107:intron 60.0%
! GCAGGTTGAACGCGAGTACC+AGG - chr2.3:5684816-5684835 MS.gene052107:intron 60.0%
! TGGCTTTACGGGAGCAGGAG+CGG - chr2.3:5684298-5684317 MS.gene052107:CDS 60.0%
CCGAGCTTCCAGTTCCAGCC+TGG + chr2.3:5684869-5684888 None:intergenic 65.0%
GCTTTACGGGAGCAGGAGCG+GGG - chr2.3:5684300-5684319 MS.gene052107:CDS 65.0%
GGCTGGAACTGGAAGCTCGG+AGG - chr2.3:5684869-5684888 MS.gene052107:intron 65.0%
GGCTTTACGGGAGCAGGAGC+GGG - chr2.3:5684299-5684318 MS.gene052107:CDS 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 5683607 5687184 5683607 ID=MS.gene052107
chr2.3 mRNA 5683607 5687184 5683607 ID=MS.gene052107.t1;Parent=MS.gene052107
chr2.3 exon 5686194 5687184 5686194 ID=MS.gene052107.t1.exon1;Parent=MS.gene052107.t1
chr2.3 CDS 5686194 5687184 5686194 ID=cds.MS.gene052107.t1;Parent=MS.gene052107.t1
chr2.3 exon 5685810 5685991 5685810 ID=MS.gene052107.t1.exon2;Parent=MS.gene052107.t1
chr2.3 CDS 5685810 5685991 5685810 ID=cds.MS.gene052107.t1;Parent=MS.gene052107.t1
chr2.3 exon 5685429 5685497 5685429 ID=MS.gene052107.t1.exon3;Parent=MS.gene052107.t1
chr2.3 CDS 5685429 5685497 5685429 ID=cds.MS.gene052107.t1;Parent=MS.gene052107.t1
chr2.3 exon 5685054 5685338 5685054 ID=MS.gene052107.t1.exon4;Parent=MS.gene052107.t1
chr2.3 CDS 5685054 5685338 5685054 ID=cds.MS.gene052107.t1;Parent=MS.gene052107.t1
chr2.3 exon 5684103 5684360 5684103 ID=MS.gene052107.t1.exon5;Parent=MS.gene052107.t1
chr2.3 CDS 5684103 5684360 5684103 ID=cds.MS.gene052107.t1;Parent=MS.gene052107.t1
chr2.3 exon 5683607 5683840 5683607 ID=MS.gene052107.t1.exon6;Parent=MS.gene052107.t1
chr2.3 CDS 5683607 5683840 5683607 ID=cds.MS.gene052107.t1;Parent=MS.gene052107.t1
Gene Sequence

>MS.gene052107

ATGTACCGAAAATCAGAACAAGCTCGTGAGTCTGATTTGGAGTACTACAAGCGTAGATATTATGAAGACCTGAAGGATGATTACTACAAGGAAACGCTCAAAATCTCTGATTCCACGTTTCGCTGTCCGTTTTGCTACAACAAGGATTACTACTCTTTGAGTGAGCTATTGAGACATGCATCCAGAATTGTGGGTGACTCAGGTGAGGCAGTTAAAGATGTTGCTAAGCATTCAGCTCTGGAAATGTATATTGAAAGCTATGGTGATAAGTTAACTGCTGTTACTATTGATAATGATAAGACCCCTGGTGTTAGTATTGTTAATGATAAGTCGGTTAATTTGAGTATCGCTAATGAGAAGTCACTTATTATGAATGATGCTGAGGGTCATTTGGGTAATGTGAATGTTGATGATGATGAGTTGTTTGTATGGCCATGGATGGTGATTTTGAAAAATATTGTTACTCATATTGACCCAAAAAGTGGAAAGTATGTTGGGAAAAATCATAAAAAAATTAAGGAGGAGCTGATCATGAACGGGTTTCACCCATTGAAAGTTACTACCCTTTGGAACTTTAGAGGACAAACACCCTTTGCAGTTGTTCAGTTTGGAAGAGAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAGAGGAGCTTTCAAGCAGAGCACTGTGGTAAGAGGGATTACTTGGCTTTACGGGAGCAGGAGCGGGGAGATAGACTCTTTGGGTGGATGGCACGTCGTGATGACTATAATTTCAAAGATATAGTTGGCAAACACCTTCAGGGAAATGGGGACTTGAAAACTGTTTCTGGGAAAGAAGCTGAGGACAATAGGAAAGCGAGGAAGCTTCTCTCTGGTTTGGCCAATACCTTAAAGCTGAAGACTGAGGAATTGGAACAGACAGCAAGCAAGTATGATGAGGTGAATGTGTCCCTAAGGAAAGCGATGGATCAAAAGGAAAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAGTTAAACTGAATTGTTTTAATTGATATTGGTGTTCTGTTTCTTTGATTTAGAGGAGAAACATTCTGGTTTTTACTACTATATCTATCATTTTGGTGTAGCTTACAGTCTGTTACATTTTGGAATGATTTGTAGTTGATTTGATTTTTTAATATTTCATGGTAGCTTAGTCTGTTTTATATTGTTTCATTAGAGATCAGCAAGATGCGGCAGGTTGAACGCGAGTACCAGGAGAAAGTATCTAAGGATCATGAAAAAGCCAGGCTGGAACTGGAAGCTCGGAGGAACGAACTTATTTCCCGTGAGAAGGATCTGCAGAAGCGTGAAGCAGATAATCACAATGAGAAAGCCAAGCTATATTTTGAGAAGAAACATGTAATATATTTCGGGTCTTTTAATTTATGATAGCAATGCTAAATGAATTATTCTCTCCTTTTAACCTTCTCATGAACACACTTTTGTGATAGGTCAATTTCTAAAAATTTTAACACATTTATTTGAAAGTGATCAATTTACAGGAGAACTAAATTTGCTTCTTTTAAAAATGGACCAATCACAAAAAGTGTTGTTAGCATTCCTTGCTCTATGGACCATTTGGTCTTCTGTGTCAAATTATGTATACCAATCCCTCTTATTTTTCAATAACTTATGACATATTAAATCTGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCATTAGAAGAGCAACAAAAGGCTGATGAAAAAATGATGTACTTGGCAGAAGAACATAAGGCACACTTTTCATTTTCCTATTACCTACAGTTTTTAGTTCAGCTGCATGTATATAATTATGTTTTGAGAACTCTTGGTTGGATGTTGCAGAAAGAAAAGGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTTGATGCTAAACAGGCATTGGAATTGGAGATAGAAAGGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTGGAGAGACTGATATAGATGAGAAGAAAAAATTGGAGGAAATCAAAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGTGTGGAAGATCTTCAACAAACTCTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGTTAATAGCTGTATGTATCTTCCTCAGCATATAAATGTTAATTTTAATGTCTAATGGTCTGAAAATCAACTTTAAAATGTCTTCTGTAACTAATCTTTTACAAAGTCAGGATATATTGTTTTATTTGTATAAATTGCCTTGTAAAACTTAAGCAGAAATGTAGGATCATTTATATTTTGTAATTGACATACAGCTGTTTATATAATACTACTACTAAAAGAAAAGTGTCCTGTTTGCAAACATTCAAATCATGTAGTTGAAATCTTATTTAAGTTGCTTGGAAGACGTGTCTTGTTCACATGTATTTACAACGGCCAATCCAAATTTTTGGTGTTTTCAATTCAGTTTCTATATTTAAGGAATTTCACTTTATCAACGTATCATCTTATCACGTGAATAACTTGCTTGCTTATCTAAACTATCTATTTGCTATCCAGTTGTTTGTGTCCAAAGATGATGATTGTAATTCATAAAATTTTACATTTTAGGTGAAATTGGTAGAATCGGGTCAGGTTTATGAAAAGAGCAGATTTTCTTTTTACATTTTCAGTTAATTTGTCATATTGTTTCATACTGGTTCAATCATAAGGTATCTGATACCTAAACTTGAAGCAAAATAAGTTCAAGTAGTTTGTTCCTGTTGCTTTGTTGCCATAATTTCATTGTTTATTTTGTCCAAGTAATTACATTTACTTGTACACAGTGGATTGGCTGCCCAAAGAACACTGCTCGAGTCATAATTTCTGTGAAAAGGATGGGCGAACTTGATATCAAGCCATTCGTGGAAGCAGCTAAGAGAAAATTTTCTGATGAAATGAATGAGAAAGCAGTAACTAAGAGAGAATTTTCAGAGAAAGTGCAAATGAAAGCAATCGAGTGGTGCTCAAAGTGGGATGACTATGTTAAGGATCCAAGCTGGCATCCGTTCAAAGTTGTAACGGACAAAGAAGGGAACTCCAAGGTACAATGACTTCACGAATTATGTTTGTTCCTTAAAATTAATATTTTTTCTCAGCTGTTATGTTATGACACACCTTTGGATATATTTATCCCCTAAAACATATAATGCACCATTTCTTAATAATTAGAAAGCATGGTAATTGGTATTGGGTAGTGATCTATTTACTGGAAATTTGCTGGTGTTAGCACTTATTTGGCATGTTTGTTTCCCTGCTATGAGCTGTATGGACCATGATCTAATATATGTTAGATATATCACACAGGAAATTTTAGACGGAGAAGATAAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAGCTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTAGGTACCCAATACCAGAACTCTGGAATTTTAGAGAAGGAAGGAAGGCTTCCTTGAAGGAAGGTGTTTCCCATTTAATTAAACAATGGAAGTTAAACAAGGGAAAGAAAGCTTATTGA
Protein sequence

>MS.gene052107.t1

MYRKSEQARESDLEYYKRRYYEDLKDDYYKETLKISDSTFRCPFCYNKDYYSLSELLRHASRIVGDSGEAVKDVAKHSALEMYIESYGDKLTAVTIDNDKTPGVSIVNDKSVNLSIANEKSLIMNDAEGHLGNVNVDDDELFVWPWMVILKNIVTHIDPKSGKYVGKNHKKIKEELIMNGFHPLKVTTLWNFRGQTPFAVVQFGREWDGFHNAMKLERSFQAEHCGKRDYLALREQERGDRLFGWMARRDDYNFKDIVGKHLQGNGDLKTVSGKEAEDNRKARKLLSGLANTLKLKTEELEQTASKYDEVNVSLRKAMDQKEKMLEHFNKEISKMRQVEREYQEKVSKDHEKARLELEARRNELISREKDLQKREADNHNEKAKLYFEKKHNEMALEEQQKADEKMMYLAEEHKKEKEKLHKKIHDLERGLDAKQALELEIERLKGAFQVMNHIGETDIDEKKKLEEIKMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLIAWIGCPKNTARVIISVKRMGELDIKPFVEAAKRKFSDEMNEKAVTKREFSEKVQMKAIEWCSKWDDYVKDPSWHPFKVVTDKEGNSKEILDGEDKKLKSLKDEFGDEVHDAVATALKELNEYNPSGRYPIPELWNFREGRKASLKEGVSHLIKQWKLNKGKKAY