AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31098

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31098.t1 MTR_2g097960 96.796 437 4 2 1 436 1 428 0.0 870
MS.gene31098.t1 MTR_4g131970 55.041 367 124 7 8 367 67 399 1.82e-129 380
MS.gene31098.t1 MTR_2g022950 53.385 384 118 9 6 371 51 391 2.74e-124 366
MS.gene31098.t1 MTR_4g086600 56.352 307 115 4 12 313 113 405 2.97e-120 358
MS.gene31098.t1 MTR_1g020080 50.409 367 140 6 13 374 95 424 1.19e-119 355
MS.gene31098.t1 MTR_3g101370 50.267 374 143 7 6 374 84 419 8.75e-119 353
MS.gene31098.t1 MTR_2g022950 70.968 186 52 1 6 189 51 236 1.02e-91 278
MS.gene31098.t1 MTR_2g022950 70.968 186 52 1 6 189 51 236 2.14e-91 278
MS.gene31098.t1 MTR_3g101370 63.874 191 68 1 6 195 84 274 1.15e-85 264
MS.gene31098.t1 MTR_1g020080 63.736 182 66 0 13 194 95 276 1.50e-82 256
MS.gene31098.t1 MTR_3g109090 29.841 315 195 7 14 322 43 337 9.72e-36 137
MS.gene31098.t1 MTR_3g109090 29.841 315 195 7 14 322 59 353 1.03e-35 137
MS.gene31098.t1 MTR_4g124940 31.329 316 188 9 14 322 45 338 4.10e-35 134
MS.gene31098.t1 MTR_8g022050 31.922 307 183 12 14 316 61 345 3.66e-32 127
MS.gene31098.t1 MTR_7g102730 25.378 331 190 8 16 339 11 291 2.23e-27 115
MS.gene31098.t1 MTR_7g102730 25.240 313 190 10 14 318 97 373 3.15e-20 93.6
MS.gene31098.t1 MTR_1g061870 25.723 311 178 7 16 321 16 278 1.52e-26 112
MS.gene31098.t1 MTR_3g065190 32.203 177 114 3 16 192 26 196 4.41e-24 103
MS.gene31098.t1 MTR_1g097440 22.912 419 227 10 16 345 31 442 9.20e-24 104
MS.gene31098.t1 MTR_1g019150 23.939 330 197 8 16 339 33 314 7.62e-23 101
MS.gene31098.t1 MTR_1g019150 24.537 216 146 5 10 212 206 417 1.21e-13 73.6
MS.gene31098.t1 MTR_1g056520 29.268 205 133 4 1 196 94 295 1.22e-22 98.2
MS.gene31098.t1 MTR_4g085540 24.919 309 179 8 16 319 35 295 1.10e-20 95.1
MS.gene31098.t1 MTR_4g085540 25.962 208 140 5 16 212 214 418 2.90e-15 78.6
MS.gene31098.t1 MTR_1g045510 31.148 183 114 5 13 190 110 285 2.98e-20 90.9
MS.gene31098.t1 MTR_3g075500 31.868 182 115 4 17 192 111 289 2.56e-19 88.2
MS.gene31098.t1 MTR_3g102040 25.517 290 163 8 16 300 25 266 5.43e-19 89.7
MS.gene31098.t1 MTR_3g102040 24.766 214 147 5 13 215 201 411 5.40e-14 74.3
MS.gene31098.t1 MTR_6g040190 23.123 333 198 9 13 339 23 303 9.68e-19 89.0
MS.gene31098.t1 MTR_4g104470 29.231 195 115 6 4 188 114 295 1.15e-18 86.7
MS.gene31098.t1 MTR_7g106440 25.806 186 123 3 17 190 111 293 4.88e-18 85.1
MS.gene31098.t1 MTR_3g075500 32.716 162 100 4 17 172 111 269 2.12e-17 82.4
MS.gene31098.t1 MTR_1g064230 32.143 196 107 6 17 189 86 278 6.68e-17 80.9
MS.gene31098.t1 MTR_1g064230 26.695 236 137 6 94 319 70 279 7.96e-11 63.2
MS.gene31098.t1 MTR_1g080150 37.931 87 53 1 107 193 131 216 3.61e-14 72.4
MS.gene31098.t1 MTR_7g053230 52.381 63 29 1 230 291 1 63 5.60e-14 67.0
MS.gene31098.t1 MTR_6g004810 27.746 173 119 2 17 189 47 213 1.58e-13 72.0
MS.gene31098.t1 MTR_3g079200 38.000 100 56 2 238 336 224 318 1.65e-13 72.8
MS.gene31098.t1 MTR_3g055990 27.225 191 122 5 12 191 3 187 2.12e-12 69.3
MS.gene31098.t1 MTR_3g055990 27.225 191 122 5 12 191 3 187 2.24e-12 68.9
MS.gene31098.t1 MTR_2g026180 27.568 185 115 5 17 188 6 184 3.19e-12 68.6
MS.gene31098.t1 MTR_3g084040 41.250 80 45 2 110 189 38 115 2.97e-11 61.6
MS.gene31098.t1 MTR_5g097580 27.660 188 115 6 17 191 8 187 3.43e-11 65.5
MS.gene31098.t1 MTR_5g097580 27.957 186 113 6 17 189 8 185 4.55e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31098.t1 AT5G19350 68.360 433 111 9 4 433 13 422 0.0 556
MS.gene31098.t1 AT5G19350 68.129 433 108 10 4 433 13 418 0.0 551
MS.gene31098.t1 AT5G54900 53.073 358 124 5 6 357 51 370 5.32e-122 360
MS.gene31098.t1 AT1G11650 52.557 352 127 6 7 357 54 366 4.11e-118 351
MS.gene31098.t1 AT1G47490 50.267 374 147 8 6 374 92 431 8.56e-114 341
MS.gene31098.t1 AT1G49600 50.430 349 142 4 12 359 116 434 2.05e-113 340
MS.gene31098.t1 AT1G47500 51.070 374 144 9 6 374 94 433 4.49e-113 339
MS.gene31098.t1 AT3G19130 52.941 306 128 3 9 313 102 392 2.30e-112 337
MS.gene31098.t1 AT4G27000 53.016 315 119 1 8 322 73 358 3.76e-111 333
MS.gene31098.t1 AT1G49600 54.605 304 115 3 12 313 116 398 1.70e-110 333
MS.gene31098.t1 AT1G49600 54.605 304 115 3 12 313 116 398 1.70e-110 333
MS.gene31098.t1 AT1G11650 55.674 282 95 3 7 287 54 306 4.89e-105 314
MS.gene31098.t1 AT1G47500 62.176 193 70 2 6 195 94 286 1.53e-80 251
MS.gene31098.t1 AT1G47490 61.140 193 72 2 6 195 92 284 1.08e-79 249
MS.gene31098.t1 AT1G54080 32.353 306 183 9 14 316 62 346 1.06e-36 139
MS.gene31098.t1 AT3G14100 32.353 306 183 9 14 316 58 342 1.24e-36 139
MS.gene31098.t1 AT1G54080 32.258 310 182 10 14 316 62 350 1.20e-35 136
MS.gene31098.t1 AT1G17370 31.596 307 184 10 14 316 53 337 4.18e-34 132
MS.gene31098.t1 AT1G17370 31.270 307 182 10 14 316 53 334 4.73e-34 132
MS.gene31098.t1 AT1G22760 25.806 310 178 8 16 320 50 312 1.20e-23 104
MS.gene31098.t1 AT1G22760 26.738 187 119 5 16 189 230 411 4.41e-13 71.6
MS.gene31098.t1 AT2G36660 25.723 311 176 10 16 321 25 285 3.60e-23 102
MS.gene31098.t1 AT1G71770 24.194 310 183 9 16 320 60 322 3.88e-22 99.8
MS.gene31098.t1 AT1G71770 25.134 187 122 5 16 189 240 421 6.63e-12 68.2
MS.gene31098.t1 AT1G71770 24.194 310 183 9 16 320 60 322 3.88e-22 99.8
MS.gene31098.t1 AT1G71770 25.134 187 122 5 16 189 240 421 6.63e-12 68.2
MS.gene31098.t1 AT3G52380 30.052 193 119 4 9 189 111 299 3.89e-22 97.1
MS.gene31098.t1 AT2G18510 28.959 221 147 6 16 234 26 238 9.23e-22 96.7
MS.gene31098.t1 AT1G49760 24.625 333 193 8 16 338 46 330 1.67e-21 97.8
MS.gene31098.t1 AT1G49760 27.568 185 120 4 16 189 225 406 1.24e-13 73.6
MS.gene31098.t1 AT1G49760 24.625 333 193 8 16 338 46 330 1.67e-21 97.8
MS.gene31098.t1 AT1G49760 27.568 185 120 4 16 189 225 406 1.24e-13 73.6
MS.gene31098.t1 AT5G50250 33.143 175 111 3 17 188 115 286 1.22e-20 92.0
MS.gene31098.t1 AT4G34110 23.529 289 168 6 16 299 37 277 1.30e-20 95.1
MS.gene31098.t1 AT4G34110 26.570 207 138 5 16 211 216 419 1.41e-14 76.3
MS.gene31098.t1 AT4G24770 33.516 182 118 3 8 188 144 323 4.37e-20 91.3
MS.gene31098.t1 AT4G24770 33.516 182 118 3 8 188 144 323 4.37e-20 91.3
MS.gene31098.t1 AT1G60000 30.899 178 111 4 17 189 87 257 1.07e-19 88.6
MS.gene31098.t1 AT3G16380 24.437 311 184 6 16 321 22 286 5.00e-18 86.7
MS.gene31098.t1 AT2G37220 29.897 194 111 4 17 188 93 283 5.34e-18 84.3
MS.gene31098.t1 AT2G23350 25.172 290 164 7 16 300 47 288 7.59e-18 86.7
MS.gene31098.t1 AT2G23350 26.486 185 122 5 16 189 226 407 4.95e-13 71.6
MS.gene31098.t1 AT5G41690 25.152 330 191 12 15 307 68 378 2.95e-17 84.3
MS.gene31098.t1 AT5G41690 25.152 330 191 12 15 307 68 378 2.95e-17 84.3
MS.gene31098.t1 AT5G41690 25.152 330 191 12 15 307 68 378 2.95e-17 84.3
MS.gene31098.t1 AT2G33410 30.890 191 109 6 17 191 8 191 7.26e-17 82.4
MS.gene31098.t1 AT3G13224 29.944 177 120 2 14 190 9 181 1.28e-15 78.2
MS.gene31098.t1 AT3G52150 28.358 201 117 5 4 185 61 253 3.47e-15 75.5
MS.gene31098.t1 AT3G52150 28.358 201 117 5 4 185 61 253 3.47e-15 75.5
MS.gene31098.t1 AT3G13224 29.885 174 118 2 17 190 21 190 7.60e-15 75.9
MS.gene31098.t1 AT4G14300 31.210 157 92 4 17 160 8 161 3.66e-14 74.3
MS.gene31098.t1 AT4G14300 31.210 157 92 4 17 160 8 161 3.66e-14 74.3
MS.gene31098.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.50e-13 72.0
MS.gene31098.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.50e-13 72.0
MS.gene31098.t1 AT1G17640 27.322 183 112 3 17 190 68 238 1.50e-13 72.0
MS.gene31098.t1 AT5G40490 26.064 188 125 5 6 189 33 210 1.61e-13 72.4
MS.gene31098.t1 AT4G16280 25.359 209 147 5 17 221 122 325 2.21e-13 72.4
MS.gene31098.t1 AT4G16280 25.359 209 147 5 17 221 47 250 2.71e-13 72.4
MS.gene31098.t1 AT4G16280 25.359 209 147 5 17 221 122 325 3.21e-13 72.4
MS.gene31098.t1 AT1G48920 27.841 176 102 7 15 172 297 465 3.75e-13 71.6
MS.gene31098.t1 AT5G40490 28.221 163 104 4 30 189 41 193 6.08e-13 70.5
MS.gene31098.t1 AT3G04500 37.647 85 52 1 107 191 136 219 7.11e-13 68.6
MS.gene31098.t1 AT4G13850 39.506 81 48 1 110 190 37 116 8.89e-13 65.5
MS.gene31098.t1 AT4G13850 39.506 81 48 1 110 190 37 116 1.26e-12 65.5
MS.gene31098.t1 AT3G13224 30.000 160 102 3 17 173 21 173 1.69e-12 67.4
MS.gene31098.t1 AT4G13850 40.506 79 46 1 110 188 37 114 2.67e-12 65.1
MS.gene31098.t1 AT4G13850 40.506 79 46 1 110 188 37 114 2.98e-12 65.1
MS.gene31098.t1 AT3G23830 40.741 81 47 1 110 190 37 116 8.19e-12 63.2
MS.gene31098.t1 AT3G23830 40.741 81 47 1 110 190 37 116 8.19e-12 63.2
MS.gene31098.t1 AT2G29580 35.165 91 58 1 238 327 224 314 8.75e-12 67.4
MS.gene31098.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.41e-11 66.6
MS.gene31098.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.41e-11 66.6
MS.gene31098.t1 AT5G47620 27.273 187 119 6 13 188 4 184 1.41e-11 66.6
MS.gene31098.t1 AT4G39260 37.209 86 53 1 107 192 5 89 1.41e-11 60.8
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.98e-11 66.2
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.98e-11 66.2
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.98e-11 66.2
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.98e-11 66.2
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 1.98e-11 66.2
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.39e-11 65.9
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.39e-11 65.9
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.39e-11 65.9
MS.gene31098.t1 AT5G55550 26.289 194 122 5 13 191 4 191 2.39e-11 65.9
MS.gene31098.t1 AT1G07360 35.443 79 50 1 238 315 224 302 2.57e-11 65.9
MS.gene31098.t1 AT2G35410 27.072 181 112 6 15 182 95 268 2.93e-11 64.7
MS.gene31098.t1 AT4G39260 39.241 79 47 1 107 185 5 82 7.25e-11 60.1

Find 149 sgRNAs with CRISPR-Local

Find 368 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGCTTTATGTTGGTAATT+TGG 0.127247 2.4:+5996732 MS.gene31098:intron
TTCAATATTTGTGGGTGATT+TGG 0.235214 2.4:+5994105 MS.gene31098:CDS
AACAAACCTTCCGTTTAAAC+TGG 0.249900 2.4:+5994035 MS.gene31098:CDS
AAATACCTGTCTAGCTGTTT+GGG 0.286831 2.4:-5997181 None:intergenic
CCAGAGGGACCGCCCTAAAA+TGG 0.305529 2.4:-5998590 None:intergenic
AAAATACCTGTCTAGCTGTT+TGG 0.327900 2.4:-5997182 None:intergenic
GTATTGTTTACATCGTATTC+TGG 0.332261 2.4:-5996637 None:intergenic
AACAAAACCACATGCTTTGC+CGG 0.335534 2.4:-5996830 None:intergenic
CGTTTAAACTGGGCTTCCTT+TGG 0.342734 2.4:+5994046 MS.gene31098:CDS
GGATAGGCGATTTACAATAC+TGG 0.352727 2.4:+5993834 MS.gene31098:CDS
ACAAATGATCCGAGTTTCTT+GGG 0.352764 2.4:+5997152 MS.gene31098:CDS
GAATGATCGGGACCCGCATC+AGG 0.357677 2.4:-5994085 None:intergenic
AGTCAATGGAGTGCATACTA+TGG 0.359233 2.4:+5997965 MS.gene31098:CDS
TTATATAACTTACCTGTTGC+GGG 0.367839 2.4:-5998081 None:intergenic
CCCTTACTCCTCCCAGTATT+CGG 0.368992 2.4:-5994211 None:intergenic
GGTTATGAAGCTTATGCATA+TGG 0.389478 2.4:+5998001 MS.gene31098:CDS
TTTGTTATACCTTTAGGAAC+AGG 0.395460 2.4:-5994424 None:intergenic
TCCCGATCATTCAATATTTG+TGG 0.396562 2.4:+5994096 MS.gene31098:CDS
AACAAATGATCCGAGTTTCT+TGG 0.398247 2.4:+5997151 MS.gene31098:CDS
TCGATGAAACCGTAACCTTC+GGG 0.402167 2.4:-5993944 None:intergenic
AAGATGCAGGGAAAGATATT+AGG 0.405827 2.4:+5997126 MS.gene31098:CDS
GTTGTGACTGATCCGAATAC+TGG 0.406476 2.4:+5994199 MS.gene31098:CDS
CGAACTTCTTCGAGGGATGC+TGG 0.408501 2.4:-5993803 None:intergenic
TTCGATGAAACCGTAACCTT+CGG 0.411434 2.4:-5993945 None:intergenic
CAAAGGAAGCCCAGTTTAAA+CGG 0.412622 2.4:-5994045 None:intergenic
CGGAAGGTTTGTTCGGTACC+AGG 0.416453 2.4:-5994025 None:intergenic
TCTGGTGGAACTGTATTCAC+TGG 0.419641 2.4:-5996619 None:intergenic
TGATTTGGCTCCGGATGTTA+CGG 0.425043 2.4:+5994120 MS.gene31098:CDS
GTGATGAGAGTGAGAGGAAT+CGG 0.425373 2.4:+5994254 MS.gene31098:CDS
CTTTCCCTGCATCTTCTGAA+TGG 0.425808 2.4:-5997118 None:intergenic
ACCTGGAGGATGGGGACAAC+AGG 0.425840 2.4:+5997934 MS.gene31098:CDS
ACAGGAGCAGCAGCAACAAC+AGG 0.430443 2.4:-5994406 None:intergenic
ACCTGTTGTCCCCATCCTCC+AGG 0.435952 2.4:-5997935 None:intergenic
TTCACTGGGGCGGTGTATGC+CGG 0.438322 2.4:-5996604 None:intergenic
AATCCTTATGCTGCTGCTGT+TGG 0.448247 2.4:+5994367 MS.gene31098:CDS
AACGCGTTCGGCGGCGGAGT+GGG 0.450559 2.4:-5993975 None:intergenic
AACTGGGCTTCCTTTGGTAT+CGG 0.452673 2.4:+5994052 MS.gene31098:CDS
CCAGCATATGCATACATTGA+AGG 0.454115 2.4:-5998037 None:intergenic
GGGGCGGTGTATGCCGGCAC+TGG 0.455472 2.4:-5996598 None:intergenic
CGGGCTATGTCGGAAATGAA+TGG 0.456190 2.4:+5994274 MS.gene31098:CDS
TCCGAATACTGGGAGGAGTA+AGG 0.459906 2.4:+5994210 MS.gene31098:CDS
CGGTGAACGCCGCCCTGATG+CGG 0.461004 2.4:+5994072 MS.gene31098:CDS
CTGCTGCAAGGATGAGGAAT+GGG 0.461294 2.4:-5998620 None:intergenic
TTATGCATATGGGGCTGCTC+AGG 0.463165 2.4:+5998012 MS.gene31098:CDS
AGGCATTTGAGTGCCGTTGT+AGG 0.465540 2.4:-5994005 None:intergenic
GGTGAACGCCGCCCTGATGC+GGG 0.466689 2.4:+5994073 MS.gene31098:CDS
GGGCTATGTCGGAAATGAAT+GGG 0.468658 2.4:+5994275 MS.gene31098:CDS
ATTATATAACTTACCTGTTG+CGG 0.469981 2.4:-5998082 None:intergenic
TACTTATGTTCGTAGGTTGA+AGG 0.474035 2.4:+5998158 MS.gene31098:intron
GGAAGAGTTGTATGATCCTC+TGG 0.477748 2.4:+5998226 MS.gene31098:CDS
GTAGCAGCACTAATCCTCAT+AGG 0.480555 2.4:-5994316 None:intergenic
CTGGTGGAACTGTATTCACT+GGG 0.480622 2.4:-5996618 None:intergenic
CTGGGAGGAGTAAGGGGTAT+GGG 0.481051 2.4:+5994218 MS.gene31098:CDS
CCTTCAATGTATGCATATGC+TGG 0.484513 2.4:+5998037 MS.gene31098:CDS
TTGAAGAACGCGTTCGGCGG+CGG 0.486623 2.4:-5993981 None:intergenic
GTTATGAAGCTTATGCATAT+GGG 0.486863 2.4:+5998002 MS.gene31098:CDS
ACCGTAACCTTCGGGTTGGC+CGG 0.490821 2.4:-5993936 None:intergenic
ACCGGCCAACCCGAAGGTTA+CGG 0.491000 2.4:+5993935 MS.gene31098:CDS
GCTGCTGCTCCTGTTCCTAA+AGG 0.491900 2.4:+5994415 MS.gene31098:CDS
ACAAAACCACATGCTTTGCC+GGG 0.492254 2.4:-5996829 None:intergenic
GTAGGTTTGAAGAACGCGTT+CGG 0.493065 2.4:-5993987 None:intergenic
TCTAGGACGTACCTGGAGGA+TGG 0.494871 2.4:+5997924 MS.gene31098:intron
TATGCATATGCTGGATATGC+TGG 0.494958 2.4:+5998046 MS.gene31098:CDS
TCGAAGAAGTTCGAACCCTA+TGG 0.495608 2.4:+5993813 MS.gene31098:CDS
CCCGATCATTCAATATTTGT+GGG 0.496897 2.4:+5994097 MS.gene31098:CDS
CTATGCACAATACCCGCAAC+AGG 0.497442 2.4:+5998069 MS.gene31098:CDS
CTAGGACGTACCTGGAGGAT+GGG 0.497812 2.4:+5997925 MS.gene31098:intron
GTTTAAACGGAAGGTTTGTT+CGG 0.500336 2.4:-5994032 None:intergenic
ACCCACAAATATTGAATGAT+CGG 0.504324 2.4:-5994098 None:intergenic
ATCCTTGCAGCAGCAAGCTT+AGG 0.506123 2.4:+5998630 MS.gene31098:CDS
GCACCAACAGCAGCAGCATA+AGG 0.509999 2.4:-5994370 None:intergenic
ATTGTAAATCGCCTATCCAT+AGG 0.510888 2.4:-5993829 None:intergenic
AGAAGCCATTCAGAAGATGC+AGG 0.511885 2.4:+5997113 MS.gene31098:CDS
CCGAATACTGGGAGGAGTAA+GGG 0.512021 2.4:+5994211 MS.gene31098:CDS
ATACTATGGGTATGGACAGC+CGG 0.512029 2.4:+5997979 MS.gene31098:CDS
TGGAGTGCATACTATGGGTA+TGG 0.512551 2.4:+5997971 MS.gene31098:CDS
AAATGGTTCTAGGACGTACC+TGG 0.515634 2.4:+5997917 MS.gene31098:intron
AGCTTGCTGCTGCAAGGATG+AGG 0.516585 2.4:-5998626 None:intergenic
TGTGCCTACCTTGGAACAAA+GGG 0.518894 2.4:+5998205 MS.gene31098:CDS
TGATGAGAGTGAGAGGAATC+GGG 0.519583 2.4:+5994255 MS.gene31098:CDS
AGTAAATAATCCGTAACATC+CGG 0.522797 2.4:-5994130 None:intergenic
CAACTCTTCCCTTTGTTCCA+AGG 0.526046 2.4:-5998213 None:intergenic
TACTATGGGTATGGACAGCC+GGG 0.528661 2.4:+5997980 MS.gene31098:CDS
ACTCATTATGGGAGTGTTCG+TGG 0.529143 2.4:+5994169 MS.gene31098:CDS
CCCACAAATATTGAATGATC+GGG 0.531119 2.4:-5994097 None:intergenic
TGAGAGGAATCGGGCTATGT+CGG 0.531200 2.4:+5994264 MS.gene31098:CDS
GGAAATTACTTATCAACAGC+GGG 0.531650 2.4:-5998254 None:intergenic
TCTTCCCTTTGTTCCAAGGT+AGG 0.532246 2.4:-5998209 None:intergenic
TAGGCCCCAAACAGCTAGAC+AGG 0.532303 2.4:+5997176 MS.gene31098:CDS
CTTCTTCGAGGGATGCTGGT+TGG 0.533486 2.4:-5993799 None:intergenic
AGCTATGTCTGTGCCTACCT+TGG 0.534806 2.4:+5998196 MS.gene31098:CDS
ACAAACCTTCCGTTTAAACT+GGG 0.535255 2.4:+5994036 MS.gene31098:CDS
AACAGGTGGATCAAAGTCAA+TGG 0.535631 2.4:+5997951 MS.gene31098:CDS
GGAAGCCCAGTTTAAACGGA+AGG 0.536078 2.4:-5994041 None:intergenic
TTTGCAATGCAGCTTTATGT+TGG 0.537133 2.4:+5996724 MS.gene31098:intron
TACAACGGCACTCAAATGCC+TGG 0.539720 2.4:+5994007 MS.gene31098:CDS
GTCAATGGAGTGCATACTAT+GGG 0.545165 2.4:+5997966 MS.gene31098:CDS
TTGTGACTGATCCGAATACT+GGG 0.547682 2.4:+5994200 MS.gene31098:CDS
ATAGGGTTCGAACTTCTTCG+AGG 0.549325 2.4:-5993811 None:intergenic
CTGTGCCTACCTTGGAACAA+AGG 0.550340 2.4:+5998204 MS.gene31098:CDS
ATTTGTGGGTGATTTGGCTC+CGG 0.555387 2.4:+5994111 MS.gene31098:CDS
ATCCTAAGCTTGCTGCTGCA+AGG 0.556106 2.4:-5998632 None:intergenic
ATCATCCGCAACAAAATCAC+CGG 0.556243 2.4:+5993917 MS.gene31098:CDS
ACTGGGAGGAGTAAGGGGTA+TGG 0.556936 2.4:+5994217 MS.gene31098:CDS
GGCAGCAATATATCCAGTGC+CGG 0.557073 2.4:+5996585 MS.gene31098:intron
TTGTTTACATCGTATTCTGG+TGG 0.561644 2.4:-5996634 None:intergenic
GAAGTTCGAACCCTATGGAT+AGG 0.569963 2.4:+5993818 MS.gene31098:CDS
TGGAGGATGGGGACAACAGG+TGG 0.570788 2.4:+5997937 MS.gene31098:CDS
GCTGCTGCAAGGATGAGGAA+TGG 0.571044 2.4:-5998621 None:intergenic
AATTTAGTGATGAGAGTGAG+AGG 0.571499 2.4:+5994248 MS.gene31098:CDS
GGAGATGACTTCGCCGGTGT+GGG 0.574880 2.4:-5993888 None:intergenic
TTGTAAATCGCCTATCCATA+GGG 0.576708 2.4:-5993828 None:intergenic
GTTTCTGTCAAAGTTCATCC+CGG 0.588194 2.4:+5996811 MS.gene31098:CDS
CGAATACTGGGAGGAGTAAG+GGG 0.590206 2.4:+5994212 MS.gene31098:CDS
GAACGCGTTCGGCGGCGGAG+TGG 0.591578 2.4:-5993976 None:intergenic
GGGGCCTACCCCAAGAAACT+CGG 0.596781 2.4:-5997161 None:intergenic
TAGGACGTACCTGGAGGATG+GGG 0.597591 2.4:+5997926 MS.gene31098:intron
TAGGGTTCGAACTTCTTCGA+GGG 0.602408 2.4:-5993810 None:intergenic
GGGAAATTACTTATCAACAG+CGG 0.603773 2.4:-5998255 None:intergenic
TGGAGATGACTTCGCCGGTG+TGG 0.604188 2.4:-5993889 None:intergenic
TGGGAGTGTTCGTGGTGCGA+AGG 0.608528 2.4:+5994177 MS.gene31098:CDS
AATGATCGGGACCCGCATCA+GGG 0.612676 2.4:-5994084 None:intergenic
CAAATGATCCGAGTTTCTTG+GGG 0.616070 2.4:+5997153 MS.gene31098:CDS
GGATCTTAATGTCTCAGAGG+AGG 0.616641 2.4:+5996753 MS.gene31098:CDS
GTTCATCCCGGCAAAGCATG+TGG 0.617595 2.4:+5996823 MS.gene31098:CDS
GATAGGCGATTTACAATACT+GGG 0.619711 2.4:+5993835 MS.gene31098:CDS
TGAAACCGTAACCTTCGGGT+TGG 0.626701 2.4:-5993940 None:intergenic
ATTGTTCTACTAGACCTATG+AGG 0.628022 2.4:+5994302 MS.gene31098:CDS
TGATCCGAGTTTCTTGGGGT+AGG 0.628330 2.4:+5997157 MS.gene31098:CDS
GCCCTAAAATGGCATTTCCG+TGG 0.628522 2.4:-5998579 None:intergenic
GCTGCATATCTCTCAGTCCA+CGG 0.628742 2.4:+5998562 MS.gene31098:CDS
GAAGCCATTCAGAAGATGCA+GGG 0.631248 2.4:+5997114 MS.gene31098:CDS
TTATGAAGCTTATGCATATG+GGG 0.631339 2.4:+5998003 MS.gene31098:CDS
AAAATCACCGGCCAACCCGA+AGG 0.633570 2.4:+5993929 MS.gene31098:CDS
GCGGCGTTCACCGATACCAA+AGG 0.642957 2.4:-5994062 None:intergenic
TATGCATAAGCTTCATAACC+CGG 0.644180 2.4:-5997998 None:intergenic
TTTGATGGAGATGACTTCGC+CGG 0.645530 2.4:-5993894 None:intergenic
CGCGTTCTTCAAACCTACAA+CGG 0.646772 2.4:+5993992 MS.gene31098:CDS
GGCTATGTCGGAAATGAATG+GGG 0.651745 2.4:+5994276 MS.gene31098:CDS
AATACCTGTCTAGCTGTTTG+GGG 0.652016 2.4:-5997180 None:intergenic
TCAACAGCGGGCATTGCCAG+AGG 0.653213 2.4:-5998242 None:intergenic
GGTTTGAAGAACGCGTTCGG+CGG 0.653759 2.4:-5993984 None:intergenic
ACACACTGCTTCTCCCACAC+CGG 0.659459 2.4:+5993875 MS.gene31098:CDS
TTTGGATCTTAATGTCTCAG+AGG 0.664207 2.4:+5996750 MS.gene31098:CDS
TGGAACTGTATTCACTGGGG+CGG 0.702417 2.4:-5996614 None:intergenic
GATCGGGACCCGCATCAGGG+CGG 0.708758 2.4:-5994081 None:intergenic
TGGTTCTAGGACGTACCTGG+AGG 0.726254 2.4:+5997920 MS.gene31098:intron
TGACTGATCCGAATACTGGG+AGG 0.766798 2.4:+5994203 MS.gene31098:CDS
TGGTGGAACTGTATTCACTG+GGG 0.772508 2.4:-5996617 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GTGTTTATTTATAAATTATT+GGG + chr2.4:5994530-5994549 MS.gene31098:intron 10.0%
!!! TAACAATATTTGAAATTTAA+AGG - chr2.4:5996422-5996441 None:intergenic 10.0%
!! CTTATATATAAGCTTAATAT+AGG - chr2.4:5995394-5995413 None:intergenic 15.0%
!! CTTATATGAAAACAATTTAT+AGG - chr2.4:5994860-5994879 None:intergenic 15.0%
!! GGTGTTTATTTATAAATTAT+TGG + chr2.4:5994529-5994548 MS.gene31098:intron 15.0%
!! TAAATATGAGATTTAAATCT+GGG - chr2.4:5998385-5998404 None:intergenic 15.0%
!! TATATTTGCACTAATAAATT+TGG + chr2.4:5997890-5997909 MS.gene31098:intron 15.0%
!! TGAAAATTTCAAAAATGTTA+CGG - chr2.4:5996680-5996699 None:intergenic 15.0%
!! TGAAATAAGAAAAAATAGAA+TGG - chr2.4:5996326-5996345 None:intergenic 15.0%
!! TTATGGAAATAAAATGAAAT+TGG + chr2.4:5995707-5995726 MS.gene31098:intron 15.0%
!! TTTAAATTTACATATTGCAT+TGG + chr2.4:5998105-5998124 MS.gene31098:intron 15.0%
!!! GTCATTTTTATAAGTAATTT+TGG + chr2.4:5994651-5994670 MS.gene31098:intron 15.0%
!!! TCTCTTTTGTTATTAATTTT+GGG - chr2.4:5994735-5994754 None:intergenic 15.0%
!!! TTTATTGATAATTCGAATTT+AGG + chr2.4:5997689-5997708 MS.gene31098:intron 15.0%
!!! TTTTATAATTAGGATATGTT+TGG + chr2.4:5994457-5994476 MS.gene31098:intron 15.0%
!! AAAATATGATAGAATCAGAA+TGG + chr2.4:5996105-5996124 MS.gene31098:intron 20.0%
!! AAGCATAACAATACATAAAA+AGG - chr2.4:5997396-5997415 None:intergenic 20.0%
!! ACATTCACATAATAGAATTA+AGG - chr2.4:5997048-5997067 None:intergenic 20.0%
!! AGCATAACAATACATAAAAA+GGG - chr2.4:5997395-5997414 None:intergenic 20.0%
!! ATCCTAATTATAAAAAGCTT+AGG - chr2.4:5994452-5994471 None:intergenic 20.0%
!! CTAAATATGAGATTTAAATC+TGG - chr2.4:5998386-5998405 None:intergenic 20.0%
!! GTTAAAAACCTAAACAAATA+TGG - chr2.4:5997328-5997347 None:intergenic 20.0%
!! TCCTAATTATAAAAAGCTTA+GGG - chr2.4:5994451-5994470 None:intergenic 20.0%
!! TTTACTTTATACTAGTAGAT+AGG + chr2.4:5995786-5995805 MS.gene31098:intron 20.0%
!!! AATAAAATGAAATTGGCTTA+TGG + chr2.4:5995714-5995733 MS.gene31098:intron 20.0%
!!! ACAATAGATATGTATTGATA+TGG + chr2.4:5997650-5997669 MS.gene31098:intron 20.0%
!!! AGGTATTTTTTCTTTAGAAA+TGG + chr2.4:5997196-5997215 MS.gene31098:intron 20.0%
!!! ATTTTGATTTAGTACAACTT+AGG + chr2.4:5996537-5996556 MS.gene31098:intron 20.0%
!!! CTAATAAATTTGGTTCTAAA+TGG + chr2.4:5997900-5997919 MS.gene31098:intron 20.0%
!!! CTCTTTTGTTATTAATTTTG+GGG - chr2.4:5994734-5994753 None:intergenic 20.0%
!!! GTCTCTTTTGTTATTAATTT+TGG - chr2.4:5994736-5994755 None:intergenic 20.0%
!!! GTTATTTTTATATGCTATCT+TGG + chr2.4:5995679-5995698 MS.gene31098:intron 20.0%
!!! TATTTTTCTTGTACCTATAT+GGG + chr2.4:5996172-5996191 MS.gene31098:intron 20.0%
!!! TTAGATAAAGTTTGTTATGA+TGG - chr2.4:5997786-5997805 None:intergenic 20.0%
!!! TTTGAAATTTTCATTTCCTA+TGG + chr2.4:5996687-5996706 MS.gene31098:intron 20.0%
!!! TTTGTTTAGGTTTTTAACAT+AGG + chr2.4:5997330-5997349 MS.gene31098:intron 20.0%
! AACACATTGCATTGAAAATT+AGG - chr2.4:5995836-5995855 None:intergenic 25.0%
! ACACATTGCATTGAAAATTA+GGG - chr2.4:5995835-5995854 None:intergenic 25.0%
! AGTGCTTATGTATAAGTTAT+TGG + chr2.4:5995093-5995112 MS.gene31098:intron 25.0%
! ATACTTATCTATGATTTCCT+TGG + chr2.4:5996564-5996583 MS.gene31098:intron 25.0%
! ATTATATAACTTACCTGTTG+CGG - chr2.4:5998085-5998104 None:intergenic 25.0%
! CATGTTATAAAAAGAAAGGA+GGG - chr2.4:5998278-5998297 None:intergenic 25.0%
! GTACAAGAAAAATAGAGAAA+CGG - chr2.4:5996166-5996185 None:intergenic 25.0%
! GTGCTTATGTATAAGTTATT+GGG + chr2.4:5995094-5995113 MS.gene31098:intron 25.0%
! TAATGGTTAAAGACTAAAAC+AGG + chr2.4:5997559-5997578 MS.gene31098:intron 25.0%
! TACAAGAAAAATAGAGAAAC+GGG - chr2.4:5996165-5996184 None:intergenic 25.0%
! TTTATTTCCAGAAGTTATCT+AGG - chr2.4:5994907-5994926 None:intergenic 25.0%
!! AAGCAAAACTTTTTGCAATT+TGG + chr2.4:5996781-5996800 MS.gene31098:CDS 25.0%
!! ACCCTAAGCTTTTTATAATT+AGG + chr2.4:5994447-5994466 MS.gene31098:intron 25.0%
!! AGTTGAAACTTTGATCTTTT+TGG + chr2.4:5996505-5996524 MS.gene31098:intron 25.0%
!! ATAGATATGTATTGATATGG+AGG + chr2.4:5997653-5997672 MS.gene31098:intron 25.0%
!! ATATAGTTTGTACTTGTGAA+TGG + chr2.4:5995976-5995995 MS.gene31098:intron 25.0%
!! ATTTACTACAAGAGACTTTT+AGG + chr2.4:5994146-5994165 MS.gene31098:CDS 25.0%
!! CTCCTTTCTTTTTATAACAT+GGG + chr2.4:5998277-5998296 MS.gene31098:intron 25.0%
!! CTCTTCTGTTAGTAATTTTA+TGG - chr2.4:5995514-5995533 None:intergenic 25.0%
!! GTCTCTTTTATAAGTCATTT+TGG + chr2.4:5994638-5994657 MS.gene31098:intron 25.0%
!! TATAGTTTGTACTTGTGAAT+GGG + chr2.4:5995977-5995996 MS.gene31098:intron 25.0%
!! TATGTAGAAGTTTGTTTGTT+AGG + chr2.4:5997417-5997436 MS.gene31098:intron 25.0%
!! TTCTGGAAATAAAGTGAAAT+TGG + chr2.4:5994914-5994933 MS.gene31098:intron 25.0%
!! TTTCAACTTTTCCTTTGTAT+AGG + chr2.4:5996268-5996287 MS.gene31098:intron 25.0%
!!! CAATTCAAACAACCTTTTTT+GGG + chr2.4:5995022-5995041 MS.gene31098:intron 25.0%
!!! CTATTTTTCTTGTACCTATA+TGG + chr2.4:5996171-5996190 MS.gene31098:intron 25.0%
!!! TCAATTCAAACAACCTTTTT+TGG + chr2.4:5995021-5995040 MS.gene31098:intron 25.0%
AAATGCACATGAAGTCAATA+TGG - chr2.4:5998508-5998527 None:intergenic 30.0%
AACTTATCCTAGATAACTTC+TGG + chr2.4:5994897-5994916 MS.gene31098:intron 30.0%
AATGCACATGAAGTCAATAT+GGG - chr2.4:5998507-5998526 None:intergenic 30.0%
ACCCACAAATATTGAATGAT+CGG - chr2.4:5994101-5994120 None:intergenic 30.0%
ACTTCCACAAAACTAAATAG+TGG - chr2.4:5995124-5995143 None:intergenic 30.0%
AGAATCAGAATGGTATGTAA+AGG + chr2.4:5996115-5996134 MS.gene31098:intron 30.0%
AGGAGTCATATGTATAGATA+TGG + chr2.4:5997594-5997613 MS.gene31098:intron 30.0%
AGTAAATAATCCGTAACATC+CGG - chr2.4:5994133-5994152 None:intergenic 30.0%
AGTCAACAGAATCTGTTATT+AGG + chr2.4:5994695-5994714 MS.gene31098:intron 30.0%
AGTGTAATTCATTGTCACAT+TGG + chr2.4:5995141-5995160 MS.gene31098:intron 30.0%
ATATCTATACATATGACTCC+TGG - chr2.4:5997595-5997614 None:intergenic 30.0%
ATCTTGAAATTGTGAAGGTT+TGG + chr2.4:5997481-5997500 MS.gene31098:intron 30.0%
ATGCTATCTTGGATAACTTA+TGG + chr2.4:5995690-5995709 MS.gene31098:intron 30.0%
ATTACTAACAGAAGAGACAA+TGG + chr2.4:5995518-5995537 MS.gene31098:intron 30.0%
CAAATCGTCCATATTTGTTT+AGG + chr2.4:5997317-5997336 MS.gene31098:intron 30.0%
CATTGAAAATTAGGGCTATT+TGG - chr2.4:5995827-5995846 None:intergenic 30.0%
CCATGTTATAAAAAGAAAGG+AGG - chr2.4:5998279-5998298 None:intergenic 30.0%
CTCCCATGTTATAAAAAGAA+AGG - chr2.4:5998282-5998301 None:intergenic 30.0%
GAGAAGTGAATGTAATTGTA+AGG - chr2.4:5996229-5996248 None:intergenic 30.0%
GTAAAAATACTCAAGATGCA+TGG - chr2.4:5997009-5997028 None:intergenic 30.0%
GTAAGAAAATTGTACATGAC+CGG + chr2.4:5995946-5995965 MS.gene31098:intron 30.0%
GTATTGTTTACATCGTATTC+TGG - chr2.4:5996640-5996659 None:intergenic 30.0%
GTTATGAAGCTTATGCATAT+GGG + chr2.4:5998002-5998021 MS.gene31098:CDS 30.0%
TATCTATACATATGACTCCT+GGG - chr2.4:5997594-5997613 None:intergenic 30.0%
TCAAGATGCATGGTAAATTA+GGG - chr2.4:5996999-5997018 None:intergenic 30.0%
TCTTTCAAACAAACTCACAA+GGG + chr2.4:5995763-5995782 MS.gene31098:intron 30.0%
TGAAACTTATTTCCTTTGAG+AGG - chr2.4:5996971-5996990 None:intergenic 30.0%
TGACAAACGAAAAACGTAAT+TGG - chr2.4:5995484-5995503 None:intergenic 30.0%
TGATAATTCGAATTTAGGCT+TGG + chr2.4:5997694-5997713 MS.gene31098:intron 30.0%
TGCTTAAAAAGAGATTAGAG+AGG - chr2.4:5996880-5996899 None:intergenic 30.0%
TGTATAGATATGGTTGTTGA+AGG + chr2.4:5997604-5997623 MS.gene31098:intron 30.0%
TTAAACTTACTGCCCAAAAA+AGG - chr2.4:5995037-5995056 None:intergenic 30.0%
TTACATGGGTCAATACTTAA+TGG + chr2.4:5997542-5997561 MS.gene31098:intron 30.0%
TTACTAACAGAAGAGACAAT+GGG + chr2.4:5995519-5995538 MS.gene31098:intron 30.0%
TTATATAACTTACCTGTTGC+GGG - chr2.4:5998084-5998103 None:intergenic 30.0%
TTATGAAGCTTATGCATATG+GGG + chr2.4:5998003-5998022 MS.gene31098:CDS 30.0%
TTCAATATTTGTGGGTGATT+TGG + chr2.4:5994105-5994124 MS.gene31098:CDS 30.0%
TTGATATACACAAATGCACA+AGG - chr2.4:5997253-5997272 None:intergenic 30.0%
TTGCAATTTCGATACATTCA+GGG - chr2.4:5994604-5994623 None:intergenic 30.0%
TTGCGATTTCGATACATTTA+GGG + chr2.4:5995549-5995568 MS.gene31098:intron 30.0%
TTTAAAGGATTGCATAACCT+TGG - chr2.4:5996407-5996426 None:intergenic 30.0%
TTTGCAATTCGATGCATTTA+GGG + chr2.4:5994765-5994784 MS.gene31098:intron 30.0%
TTTGCAATTTCGATACATTC+AGG - chr2.4:5994605-5994624 None:intergenic 30.0%
TTTGCGATTTCGATACATTT+AGG + chr2.4:5995548-5995567 MS.gene31098:intron 30.0%
! AATAAAGTGAAATTGGCTCA+TGG + chr2.4:5994921-5994940 MS.gene31098:intron 30.0%
! CCTCCTTTCTTTTTATAACA+TGG + chr2.4:5998276-5998295 MS.gene31098:intron 30.0%
! TTACAGCAAAACAACCATTT+TGG - chr2.4:5995605-5995624 None:intergenic 30.0%
! TTTGTTATACCTTTAGGAAC+AGG - chr2.4:5994427-5994446 None:intergenic 30.0%
!! ATTAAGTATTGACCCATGTA+AGG - chr2.4:5997543-5997562 None:intergenic 30.0%
!! ATTGCATTGGTTCATATTGA+AGG + chr2.4:5998118-5998137 MS.gene31098:intron 30.0%
!! ATTTGGTTCTAAATGGTTCT+AGG + chr2.4:5997907-5997926 MS.gene31098:intron 30.0%
!! GTTGTTTTCATAAGCTATCT+TGG - chr2.4:5995328-5995347 None:intergenic 30.0%
!! TTAAGTATTGACCCATGTAA+GGG - chr2.4:5997542-5997561 None:intergenic 30.0%
!! TTGCATTGGTTCATATTGAA+GGG + chr2.4:5998119-5998138 MS.gene31098:intron 30.0%
!!! AGACTTTTAGGACTCATTAT+GGG + chr2.4:5994158-5994177 MS.gene31098:CDS 30.0%
!!! ATGCAAATTTTAGAACCTCA+AGG - chr2.4:5996367-5996386 None:intergenic 30.0%
!!! ATGTGGTTTTGTTCAATTTG+GGG + chr2.4:5996840-5996859 MS.gene31098:CDS 30.0%
!!! CAAACCACTATTTAGTTTTG+TGG + chr2.4:5995117-5995136 MS.gene31098:intron 30.0%
!!! CATGTGGTTTTGTTCAATTT+GGG + chr2.4:5996839-5996858 MS.gene31098:CDS 30.0%
!!! TAGGGTTTTGTTATACCTTT+AGG - chr2.4:5994433-5994452 None:intergenic 30.0%
AAAACAGGAAATGATATCCC+AGG + chr2.4:5997574-5997593 MS.gene31098:intron 35.0%
AAAATACCTGTCTAGCTGTT+TGG - chr2.4:5997185-5997204 None:intergenic 35.0%
AAATACCTGTCTAGCTGTTT+GGG - chr2.4:5997184-5997203 None:intergenic 35.0%
AACAAACCTTCCGTTTAAAC+TGG + chr2.4:5994035-5994054 MS.gene31098:CDS 35.0%
AACAAATGATCCGAGTTTCT+TGG + chr2.4:5997151-5997170 MS.gene31098:CDS 35.0%
AACAAGCTGCTTATCCAAAT+AGG + chr2.4:5995450-5995469 MS.gene31098:intron 35.0%
AACATACCATGCCTATACAA+AGG - chr2.4:5996282-5996301 None:intergenic 35.0%
AACTGAACACGAGATATTGA+CGG + chr2.4:5998308-5998327 MS.gene31098:intron 35.0%
AAGATGCAGGGAAAGATATT+AGG + chr2.4:5997126-5997145 MS.gene31098:CDS 35.0%
AATTTAGTGATGAGAGTGAG+AGG + chr2.4:5994248-5994267 MS.gene31098:CDS 35.0%
ACAAACCTTCCGTTTAAACT+GGG + chr2.4:5994036-5994055 MS.gene31098:CDS 35.0%
ACAAATGATCCGAGTTTCTT+GGG + chr2.4:5997152-5997171 MS.gene31098:CDS 35.0%
ACAAGCTGCTTATCCAAATA+GGG + chr2.4:5995451-5995470 MS.gene31098:intron 35.0%
AGAAAAATAGAGAAACGGGA+CGG - chr2.4:5996161-5996180 None:intergenic 35.0%
AGCATAAGTGTTTACACTGT+TGG + chr2.4:5994508-5994527 MS.gene31098:intron 35.0%
AGGTTATCTAGATTACCTTG+TGG - chr2.4:5994840-5994859 None:intergenic 35.0%
ATAGACCATCCGATCTAAAT+CGG + chr2.4:5998438-5998457 MS.gene31098:intron 35.0%
ATCTGACTACTTATGTTCGT+AGG + chr2.4:5998151-5998170 MS.gene31098:intron 35.0%
ATTACATGCAATCATGCAGT+CGG - chr2.4:5998478-5998497 None:intergenic 35.0%
ATTGTAAATCGCCTATCCAT+AGG - chr2.4:5993832-5993851 None:intergenic 35.0%
ATTGTTCTACTAGACCTATG+AGG + chr2.4:5994302-5994321 MS.gene31098:CDS 35.0%
CAAAGGAAATAAGTTTCACG+TGG + chr2.4:5996973-5996992 MS.gene31098:intron 35.0%
CATTCCATCAATCATCAACA+CGG - chr2.4:5996057-5996076 None:intergenic 35.0%
CCCACAAATATTGAATGATC+GGG - chr2.4:5994100-5994119 None:intergenic 35.0%
CCCGATCATTCAATATTTGT+GGG + chr2.4:5994097-5994116 MS.gene31098:CDS 35.0%
CTCAAGATGCATGGTAAATT+AGG - chr2.4:5997000-5997019 None:intergenic 35.0%
CTCTTTCAAACAAACTCACA+AGG + chr2.4:5995762-5995781 MS.gene31098:intron 35.0%
GAGCAATCTTGAAATTGTGA+AGG + chr2.4:5997476-5997495 MS.gene31098:intron 35.0%
GATAGGCGATTTACAATACT+GGG + chr2.4:5993835-5993854 MS.gene31098:CDS 35.0%
GGAAATTACTTATCAACAGC+GGG - chr2.4:5998257-5998276 None:intergenic 35.0%
GGGAAATTACTTATCAACAG+CGG - chr2.4:5998258-5998277 None:intergenic 35.0%
GGTTATGAAGCTTATGCATA+TGG + chr2.4:5998001-5998020 MS.gene31098:CDS 35.0%
GTACCTATATGGGTTTAAGA+TGG + chr2.4:5996182-5996201 MS.gene31098:intron 35.0%
GTTCCATCTTAAACCCATAT+AGG - chr2.4:5996188-5996207 None:intergenic 35.0%
GTTTGCAATTCGATGCATTT+AGG + chr2.4:5994764-5994783 MS.gene31098:intron 35.0%
TACAAACTATATAGTGACGC+CGG - chr2.4:5995968-5995987 None:intergenic 35.0%
TACATTCACTTCTCGAACTT+TGG + chr2.4:5996235-5996254 MS.gene31098:intron 35.0%
TACTAACAGAAGAGACAATG+GGG + chr2.4:5995520-5995539 MS.gene31098:intron 35.0%
TAGAATAGAACCCCATGTAT+GGG - chr2.4:5997357-5997376 None:intergenic 35.0%
TATGCATAAGCTTCATAACC+CGG - chr2.4:5998001-5998020 None:intergenic 35.0%
TCCCGATCATTCAATATTTG+TGG + chr2.4:5994096-5994115 MS.gene31098:CDS 35.0%
TGTTATGGTCATAACTCACA+AGG - chr2.4:5995870-5995889 None:intergenic 35.0%
TTAACATAGGACCCATACAT+GGG + chr2.4:5997343-5997362 MS.gene31098:intron 35.0%
TTCAAAAATGTTACGGCTAC+AGG - chr2.4:5996673-5996692 None:intergenic 35.0%
TTGCAATTCGATGCATTTAG+GGG + chr2.4:5994766-5994785 MS.gene31098:intron 35.0%
TTGGAAGGGTTTATGTTCTT+AGG + chr2.4:5994984-5995003 MS.gene31098:intron 35.0%
TTGTAAATCGCCTATCCATA+GGG - chr2.4:5993831-5993850 None:intergenic 35.0%
TTGTTTACATCGTATTCTGG+TGG - chr2.4:5996637-5996656 None:intergenic 35.0%
TTTAACATAGGACCCATACA+TGG + chr2.4:5997342-5997361 MS.gene31098:intron 35.0%
TTTGATATGTTGCCTCTCAA+AGG + chr2.4:5996956-5996975 MS.gene31098:intron 35.0%
TTTGGATCTTAATGTCTCAG+AGG + chr2.4:5996750-5996769 MS.gene31098:CDS 35.0%
! ACTTTTCCTTTGTATAGGCA+TGG + chr2.4:5996273-5996292 MS.gene31098:intron 35.0%
! CGGCAAATTTTCAATCAAAC+AGG - chr2.4:5996037-5996056 None:intergenic 35.0%
! GTTTAAACGGAAGGTTTGTT+CGG - chr2.4:5994035-5994054 None:intergenic 35.0%
! TACTTATGTTCGTAGGTTGA+AGG + chr2.4:5998158-5998177 MS.gene31098:intron 35.0%
! TTGTGGCAAATCAACCATTT+TGG - chr2.4:5994823-5994842 None:intergenic 35.0%
! TTTGCAATGCAGCTTTATGT+TGG + chr2.4:5996724-5996743 MS.gene31098:intron 35.0%
! TTTGTTGCGGATGATTTTGA+TGG - chr2.4:5993912-5993931 None:intergenic 35.0%
! TTTGTTTGTTAGGACATGTG+TGG + chr2.4:5997427-5997446 MS.gene31098:intron 35.0%
!! AAAATGGTTGATTTGCCACA+AGG + chr2.4:5994822-5994841 MS.gene31098:intron 35.0%
!! AAAGTATGTAAGAGCACCAT+AGG - chr2.4:5996706-5996725 None:intergenic 35.0%
!! AGTGTAACTTGCTGTAACAT+TGG + chr2.4:5994577-5994596 MS.gene31098:intron 35.0%
!! GCAGCTTTATGTTGGTAATT+TGG + chr2.4:5996732-5996751 MS.gene31098:intron 35.0%
!! TAGAGCGTTGTTGAATGTTA+TGG - chr2.4:5995885-5995904 None:intergenic 35.0%
!!! GAGACTTTTAGGACTCATTA+TGG + chr2.4:5994157-5994176 MS.gene31098:CDS 35.0%
!!! GCATGTGGTTTTGTTCAATT+TGG + chr2.4:5996838-5996857 MS.gene31098:CDS 35.0%
AACAAAACCACATGCTTTGC+CGG - chr2.4:5996833-5996852 None:intergenic 40.0%
AACAGGTGGATCAAAGTCAA+TGG + chr2.4:5997951-5997970 MS.gene31098:CDS 40.0%
AACTTGTGAATGGCCAATGT+GGG + chr2.4:5997505-5997524 MS.gene31098:intron 40.0%
AAGGATTGCATAACCTTGGT+AGG - chr2.4:5996403-5996422 None:intergenic 40.0%
AAGGTTTGGCAACTTGTGAA+TGG + chr2.4:5997495-5997514 MS.gene31098:intron 40.0%
AATACCTGTCTAGCTGTTTG+GGG - chr2.4:5997183-5997202 None:intergenic 40.0%
AATTGGCGACTATCCCTATT+TGG - chr2.4:5995467-5995486 None:intergenic 40.0%
ACATTGAGAGACCCTTACAT+GGG + chr2.4:5997528-5997547 MS.gene31098:intron 40.0%
ACCTTGGTAGGGTAAAAAGA+AGG - chr2.4:5996391-5996410 None:intergenic 40.0%
ACTTCCAGAAACCAAGATAG+CGG - chr2.4:5994560-5994579 None:intergenic 40.0%
AGGATTGCATAACCTTGGTA+GGG - chr2.4:5996402-5996421 None:intergenic 40.0%
AGTCAATGGAGTGCATACTA+TGG + chr2.4:5997965-5997984 MS.gene31098:CDS 40.0%
AGTCTGCTTGAAAGAGCTTA+CGG - chr2.4:5994965-5994984 None:intergenic 40.0%
ATCATCCGCAACAAAATCAC+CGG + chr2.4:5993917-5993936 MS.gene31098:CDS 40.0%
ATTGTATGCAGTCTTGCAGT+CGG + chr2.4:5998337-5998356 MS.gene31098:intron 40.0%
CAAAGGAAGCCCAGTTTAAA+CGG - chr2.4:5994048-5994067 None:intergenic 40.0%
CAAATGATCCGAGTTTCTTG+GGG + chr2.4:5997153-5997172 MS.gene31098:CDS 40.0%
CAAATGCAAGACTTTGTCCT+AGG - chr2.4:5996484-5996503 None:intergenic 40.0%
CACACATTCAAGGACCAAAA+TGG + chr2.4:5994806-5994825 MS.gene31098:intron 40.0%
CCAGCATATGCATACATTGA+AGG - chr2.4:5998040-5998059 None:intergenic 40.0%
CCTTCAATGTATGCATATGC+TGG + chr2.4:5998037-5998056 MS.gene31098:CDS 40.0%
CTAAATCGGACGGCAAAAAA+GGG + chr2.4:5998452-5998471 MS.gene31098:intron 40.0%
CTAGAATAGAACCCCATGTA+TGG - chr2.4:5997358-5997377 None:intergenic 40.0%
CTGCATGATTGCATGTAATC+TGG + chr2.4:5998479-5998498 MS.gene31098:intron 40.0%
GAGATATGCAGCATTTAACC+TGG - chr2.4:5998554-5998573 None:intergenic 40.0%
GGATAGGCGATTTACAATAC+TGG + chr2.4:5993834-5993853 MS.gene31098:CDS 40.0%
GTCAATGGAGTGCATACTAT+GGG + chr2.4:5997966-5997985 MS.gene31098:CDS 40.0%
GTTTCTGTCAAAGTTCATCC+CGG + chr2.4:5996811-5996830 MS.gene31098:CDS 40.0%
TAACATAGGACCCATACATG+GGG + chr2.4:5997344-5997363 MS.gene31098:intron 40.0%
TAAGCTCTTTCAAGCAGACT+TGG + chr2.4:5994965-5994984 MS.gene31098:intron 40.0%
TAGAACCTCAAGGCTAAAGT+TGG - chr2.4:5996357-5996376 None:intergenic 40.0%
TATGCATATGCTGGATATGC+TGG + chr2.4:5998046-5998065 MS.gene31098:CDS 40.0%
TCTAAATCGGACGGCAAAAA+AGG + chr2.4:5998451-5998470 MS.gene31098:intron 40.0%
TCTTTCAAGCAGACTTGGAA+GGG + chr2.4:5994970-5994989 MS.gene31098:intron 40.0%
TGGTTCTCGAATCTGTTCTT+AGG + chr2.4:5995220-5995239 MS.gene31098:intron 40.0%
TTAACCTGGCAAAGCAATCA+AGG - chr2.4:5998540-5998559 None:intergenic 40.0%
TTCGATGAAACCGTAACCTT+CGG - chr2.4:5993948-5993967 None:intergenic 40.0%
TTGAAAGAGCTTACGGAATC+AGG - chr2.4:5994958-5994977 None:intergenic 40.0%
TTGTGACTGATCCGAATACT+GGG + chr2.4:5994200-5994219 MS.gene31098:CDS 40.0%
! TGATACCCCGTAGTTTTCTT+GGG - chr2.4:5994343-5994362 None:intergenic 40.0%
! TGTACTTGTGAATGGGTTTC+TGG + chr2.4:5995984-5996003 MS.gene31098:intron 40.0%
! TTTTGCCGTCCGATTTAGAT+CGG - chr2.4:5998450-5998469 None:intergenic 40.0%
! TTTTGGTCCTTGAATGTGTG+AGG - chr2.4:5994806-5994825 None:intergenic 40.0%
!! CGTGTTGATGATTGATGGAA+TGG + chr2.4:5996055-5996074 MS.gene31098:intron 40.0%
!! GATATCCAACTTTAGCCTTG+AGG + chr2.4:5996349-5996368 MS.gene31098:intron 40.0%
!! GTTTTGTTCAATTTGGGGCT+AGG + chr2.4:5996845-5996864 MS.gene31098:CDS 40.0%
!! TTTGCCGTGTTGATGATTGA+TGG + chr2.4:5996050-5996069 MS.gene31098:intron 40.0%
!!! TCCACGGAAATGCCATTTTA+GGG + chr2.4:5998578-5998597 MS.gene31098:CDS 40.0%
AACTGGGCTTCCTTTGGTAT+CGG + chr2.4:5994052-5994071 MS.gene31098:CDS 45.0%
AATCCTTATGCTGCTGCTGT+TGG + chr2.4:5994367-5994386 MS.gene31098:CDS 45.0%
ACAAAACCACATGCTTTGCC+GGG - chr2.4:5996832-5996851 None:intergenic 45.0%
ACCATCCGATCTAAATCGGA+CGG + chr2.4:5998442-5998461 MS.gene31098:intron 45.0%
AGAAGCCATTCAGAAGATGC+AGG + chr2.4:5997113-5997132 MS.gene31098:CDS 45.0%
ATACTATGGGTATGGACAGC+CGG + chr2.4:5997979-5997998 MS.gene31098:CDS 45.0%
ATAGGGTTCGAACTTCTTCG+AGG - chr2.4:5993814-5993833 None:intergenic 45.0%
ATGTCCTTGATTGCTTTGCC+AGG + chr2.4:5998533-5998552 MS.gene31098:intron 45.0%
CAAACCGCTATCTTGGTTTC+TGG + chr2.4:5994553-5994572 MS.gene31098:intron 45.0%
CAACTCTTCCCTTTGTTCCA+AGG - chr2.4:5998216-5998235 None:intergenic 45.0%
CAACTTGTGAATGGCCAATG+TGG + chr2.4:5997504-5997523 MS.gene31098:intron 45.0%
CACTGGATATATTGCTGCCA+AGG - chr2.4:5996584-5996603 None:intergenic 45.0%
CGCGTTCTTCAAACCTACAA+CGG + chr2.4:5993992-5994011 MS.gene31098:CDS 45.0%
CGTTTAAACTGGGCTTCCTT+TGG + chr2.4:5994046-5994065 MS.gene31098:CDS 45.0%
CTCTTTCAAGCAGACTTGGA+AGG + chr2.4:5994969-5994988 MS.gene31098:intron 45.0%
CTGCAAGACTGCATACAATC+CGG - chr2.4:5998336-5998355 None:intergenic 45.0%
CTGGTGGAACTGTATTCACT+GGG - chr2.4:5996621-5996640 None:intergenic 45.0%
CTTTCCCTGCATCTTCTGAA+TGG - chr2.4:5997121-5997140 None:intergenic 45.0%
GAAGCCATTCAGAAGATGCA+GGG + chr2.4:5997114-5997133 MS.gene31098:CDS 45.0%
GAAGTTCGAACCCTATGGAT+AGG + chr2.4:5993818-5993837 MS.gene31098:CDS 45.0%
GACATTGAGAGACCCTTACA+TGG + chr2.4:5997527-5997546 MS.gene31098:intron 45.0%
GAGATTTAAATCTGGGCCGT+CGG - chr2.4:5998378-5998397 None:intergenic 45.0%
GATGTGACTAGAACCTTCCT+AGG + chr2.4:5996464-5996483 MS.gene31098:intron 45.0%
GGAAGAGTTGTATGATCCTC+TGG + chr2.4:5998226-5998245 MS.gene31098:CDS 45.0%
GGATCTTAATGTCTCAGAGG+AGG + chr2.4:5996753-5996772 MS.gene31098:CDS 45.0%
GGCTATGTCGGAAATGAATG+GGG + chr2.4:5994276-5994295 MS.gene31098:CDS 45.0%
GGGCTATGTCGGAAATGAAT+GGG + chr2.4:5994275-5994294 MS.gene31098:CDS 45.0%
GTAGCAGCACTAATCCTCAT+AGG - chr2.4:5994319-5994338 None:intergenic 45.0%
GTAGGTTTGAAGAACGCGTT+CGG - chr2.4:5993990-5994009 None:intergenic 45.0%
GTGATGAGAGTGAGAGGAAT+CGG + chr2.4:5994254-5994273 MS.gene31098:CDS 45.0%
GTTGTGACTGATCCGAATAC+TGG + chr2.4:5994199-5994218 MS.gene31098:CDS 45.0%
TAGGGTTCGAACTTCTTCGA+GGG - chr2.4:5993813-5993832 None:intergenic 45.0%
TATTGGGCAAACCGCTATCT+TGG + chr2.4:5994546-5994565 MS.gene31098:intron 45.0%
TCGAAGAAGTTCGAACCCTA+TGG + chr2.4:5993813-5993832 MS.gene31098:CDS 45.0%
TCGATGAAACCGTAACCTTC+GGG - chr2.4:5993947-5993966 None:intergenic 45.0%
TCTGGTGGAACTGTATTCAC+TGG - chr2.4:5996622-5996641 None:intergenic 45.0%
TCTTCCCTTTGTTCCAAGGT+AGG - chr2.4:5998212-5998231 None:intergenic 45.0%
TGATGAGAGTGAGAGGAATC+GGG + chr2.4:5994255-5994274 MS.gene31098:CDS 45.0%
TGCAAGACTTTGTCCTAGGA+AGG - chr2.4:5996480-5996499 None:intergenic 45.0%
TGCTACCCCCAAGAAAACTA+CGG + chr2.4:5994333-5994352 MS.gene31098:CDS 45.0%
TGGAGTGCATACTATGGGTA+TGG + chr2.4:5997971-5997990 MS.gene31098:CDS 45.0%
TGGTGGAACTGTATTCACTG+GGG - chr2.4:5996620-5996639 None:intergenic 45.0%
TGTGCCTACCTTGGAACAAA+GGG + chr2.4:5998205-5998224 MS.gene31098:CDS 45.0%
TTCAGCACCTCACACATTCA+AGG + chr2.4:5994796-5994815 MS.gene31098:intron 45.0%
TTTGATGGAGATGACTTCGC+CGG - chr2.4:5993897-5993916 None:intergenic 45.0%
! ACACGAGATATTGACGGATC+CGG + chr2.4:5998314-5998333 MS.gene31098:intron 45.0%
! ATACCCCGTAGTTTTCTTGG+GGG - chr2.4:5994341-5994360 None:intergenic 45.0%
! ATTTGTGGGTGATTTGGCTC+CGG + chr2.4:5994111-5994130 MS.gene31098:CDS 45.0%
! CTGATACCCCGTAGTTTTCT+TGG - chr2.4:5994344-5994363 None:intergenic 45.0%
! GATACCCCGTAGTTTTCTTG+GGG - chr2.4:5994342-5994361 None:intergenic 45.0%
! GCCTTCTTTTTACCCTACCA+AGG + chr2.4:5996387-5996406 MS.gene31098:intron 45.0%
! TGATTTGGCTCCGGATGTTA+CGG + chr2.4:5994120-5994139 MS.gene31098:CDS 45.0%
!! AAATGGTTCTAGGACGTACC+TGG + chr2.4:5997917-5997936 MS.gene31098:intron 45.0%
!! ACTCATTATGGGAGTGTTCG+TGG + chr2.4:5994169-5994188 MS.gene31098:CDS 45.0%
!!! ACGGAAATGCCATTTTAGGG+CGG + chr2.4:5998581-5998600 MS.gene31098:CDS 45.0%
!!! GTCCACGGAAATGCCATTTT+AGG + chr2.4:5998577-5998596 MS.gene31098:CDS 45.0%
AGCTATGTCTGTGCCTACCT+TGG + chr2.4:5998196-5998215 MS.gene31098:CDS 50.0%
CCCTTACTCCTCCCAGTATT+CGG - chr2.4:5994214-5994233 None:intergenic 50.0%
CCGAATACTGGGAGGAGTAA+GGG + chr2.4:5994211-5994230 MS.gene31098:CDS 50.0%
CGAATACTGGGAGGAGTAAG+GGG + chr2.4:5994212-5994231 MS.gene31098:CDS 50.0%
CGGGCTATGTCGGAAATGAA+TGG + chr2.4:5994274-5994293 MS.gene31098:CDS 50.0%
CTACCCCCAAGAAAACTACG+GGG + chr2.4:5994335-5994354 MS.gene31098:CDS 50.0%
CTATGCACAATACCCGCAAC+AGG + chr2.4:5998069-5998088 MS.gene31098:CDS 50.0%
CTGCTGCAAGGATGAGGAAT+GGG - chr2.4:5998623-5998642 None:intergenic 50.0%
CTGTGCCTACCTTGGAACAA+AGG + chr2.4:5998204-5998223 MS.gene31098:CDS 50.0%
GCCCTAAAATGGCATTTCCG+TGG - chr2.4:5998582-5998601 None:intergenic 50.0%
GCTACCCCCAAGAAAACTAC+GGG + chr2.4:5994334-5994353 MS.gene31098:CDS 50.0%
GCTGCATATCTCTCAGTCCA+CGG + chr2.4:5998562-5998581 MS.gene31098:CDS 50.0%
GGAAGCCCAGTTTAAACGGA+AGG - chr2.4:5994044-5994063 None:intergenic 50.0%
GGCAGCAATATATCCAGTGC+CGG + chr2.4:5996585-5996604 MS.gene31098:intron 50.0%
GGTCTCTCAATGTCCCACAT+TGG - chr2.4:5997521-5997540 None:intergenic 50.0%
GTCCATTTCTGACCATCCGA+CGG + chr2.4:5998359-5998378 MS.gene31098:intron 50.0%
TACAACGGCACTCAAATGCC+TGG + chr2.4:5994007-5994026 MS.gene31098:CDS 50.0%
TACTATGGGTATGGACAGCC+GGG + chr2.4:5997980-5997999 MS.gene31098:CDS 50.0%
TCCGAATACTGGGAGGAGTA+AGG + chr2.4:5994210-5994229 MS.gene31098:CDS 50.0%
TGAAACCGTAACCTTCGGGT+TGG - chr2.4:5993943-5993962 None:intergenic 50.0%
TGACTGATCCGAATACTGGG+AGG + chr2.4:5994203-5994222 MS.gene31098:CDS 50.0%
TGAGAGGAATCGGGCTATGT+CGG + chr2.4:5994264-5994283 MS.gene31098:CDS 50.0%
TGATCCGAGTTTCTTGGGGT+AGG + chr2.4:5997157-5997176 MS.gene31098:CDS 50.0%
TGGAACTGTATTCACTGGGG+CGG - chr2.4:5996617-5996636 None:intergenic 50.0%
TTATGCATATGGGGCTGCTC+AGG + chr2.4:5998012-5998031 MS.gene31098:CDS 50.0%
TTTAAATCTGGGCCGTCGGA+TGG - chr2.4:5998374-5998393 None:intergenic 50.0%
! AGGCATTTGAGTGCCGTTGT+AGG - chr2.4:5994008-5994027 None:intergenic 50.0%
! GTTGGCCGGTGATTTTGTTG+CGG - chr2.4:5993925-5993944 None:intergenic 50.0%
!! AGGAATGGGTTTTGTGCCAG+AGG - chr2.4:5998609-5998628 None:intergenic 50.0%
!! GGAATGGGTTTTGTGCCAGA+GGG - chr2.4:5998608-5998627 None:intergenic 50.0%
AAAATCACCGGCCAACCCGA+AGG + chr2.4:5993929-5993948 MS.gene31098:CDS 55.0%
AATGATCGGGACCCGCATCA+GGG - chr2.4:5994087-5994106 None:intergenic 55.0%
ACACACTGCTTCTCCCACAC+CGG + chr2.4:5993875-5993894 MS.gene31098:CDS 55.0%
ACAGGAGCAGCAGCAACAAC+AGG - chr2.4:5994409-5994428 None:intergenic 55.0%
ACTGGGAGGAGTAAGGGGTA+TGG + chr2.4:5994217-5994236 MS.gene31098:CDS 55.0%
CGAACTTCTTCGAGGGATGC+TGG - chr2.4:5993806-5993825 None:intergenic 55.0%
CTAGGACGTACCTGGAGGAT+GGG + chr2.4:5997925-5997944 MS.gene31098:intron 55.0%
CTTCTTCGAGGGATGCTGGT+TGG - chr2.4:5993802-5993821 None:intergenic 55.0%
GCACCAACAGCAGCAGCATA+AGG - chr2.4:5994373-5994392 None:intergenic 55.0%
GCCGTCCGATTTAGATCGGA+TGG - chr2.4:5998446-5998465 None:intergenic 55.0%
GCTGCTGCAAGGATGAGGAA+TGG - chr2.4:5998624-5998643 None:intergenic 55.0%
GCTGCTGCTCCTGTTCCTAA+AGG + chr2.4:5994415-5994434 MS.gene31098:CDS 55.0%
GGTTTGAAGAACGCGTTCGG+CGG - chr2.4:5993987-5994006 None:intergenic 55.0%
GTCAGCGCCTCACACATTCA+AGG + chr2.4:5995578-5995597 MS.gene31098:intron 55.0%
GTTCATCCCGGCAAAGCATG+TGG + chr2.4:5996823-5996842 MS.gene31098:CDS 55.0%
TAGGACGTACCTGGAGGATG+GGG + chr2.4:5997926-5997945 MS.gene31098:intron 55.0%
TAGGCCCCAAACAGCTAGAC+AGG + chr2.4:5997176-5997195 MS.gene31098:CDS 55.0%
! CGGAAGGTTTGTTCGGTACC+AGG - chr2.4:5994028-5994047 None:intergenic 55.0%
! CTGGGAGGAGTAAGGGGTAT+GGG + chr2.4:5994218-5994237 MS.gene31098:CDS 55.0%
! TCTAGGACGTACCTGGAGGA+TGG + chr2.4:5997924-5997943 MS.gene31098:intron 55.0%
!! AGCTTGCTGCTGCAAGGATG+AGG - chr2.4:5998629-5998648 None:intergenic 55.0%
!! TGGTTCTAGGACGTACCTGG+AGG + chr2.4:5997920-5997939 MS.gene31098:intron 55.0%
ACCGGCCAACCCGAAGGTTA+CGG + chr2.4:5993935-5993954 MS.gene31098:CDS 60.0%
ACCTGGAGGATGGGGACAAC+AGG + chr2.4:5997934-5997953 MS.gene31098:CDS 60.0%
ACCTGTTGTCCCCATCCTCC+AGG - chr2.4:5997938-5997957 None:intergenic 60.0%
CCAGAGGGACCGCCCTAAAA+TGG - chr2.4:5998593-5998612 None:intergenic 60.0%
GAATGATCGGGACCCGCATC+AGG - chr2.4:5994088-5994107 None:intergenic 60.0%
GCGGCGTTCACCGATACCAA+AGG - chr2.4:5994065-5994084 None:intergenic 60.0%
GGAGATGACTTCGCCGGTGT+GGG - chr2.4:5993891-5993910 None:intergenic 60.0%
GGCCGTCGGATGGTCAGAAA+TGG - chr2.4:5998364-5998383 None:intergenic 60.0%
GGGGCCTACCCCAAGAAACT+CGG - chr2.4:5997164-5997183 None:intergenic 60.0%
TGGAGATGACTTCGCCGGTG+TGG - chr2.4:5993892-5993911 None:intergenic 60.0%
TGGAGGATGGGGACAACAGG+TGG + chr2.4:5997937-5997956 MS.gene31098:CDS 60.0%
TTCACTGGGGCGGTGTATGC+CGG - chr2.4:5996607-5996626 None:intergenic 60.0%
TTGAAGAACGCGTTCGGCGG+CGG - chr2.4:5993984-5994003 None:intergenic 60.0%
! TCAACAGCGGGCATTGCCAG+AGG - chr2.4:5998245-5998264 None:intergenic 60.0%
!! ACCGTAACCTTCGGGTTGGC+CGG - chr2.4:5993939-5993958 None:intergenic 60.0%
!! TGGGAGTGTTCGTGGTGCGA+AGG + chr2.4:5994177-5994196 MS.gene31098:CDS 60.0%
!!! CCATTTTAGGGCGGTCCCTC+TGG + chr2.4:5998590-5998609 MS.gene31098:CDS 60.0%
AACGCGTTCGGCGGCGGAGT+GGG - chr2.4:5993978-5993997 None:intergenic 70.0%
CGGTGAACGCCGCCCTGATG+CGG + chr2.4:5994072-5994091 MS.gene31098:CDS 70.0%
GATCGGGACCCGCATCAGGG+CGG - chr2.4:5994084-5994103 None:intergenic 70.0%
GGTGAACGCCGCCCTGATGC+GGG + chr2.4:5994073-5994092 MS.gene31098:CDS 70.0%
GAACGCGTTCGGCGGCGGAG+TGG - chr2.4:5993979-5993998 None:intergenic 75.0%
GGGGCGGTGTATGCCGGCAC+TGG - chr2.4:5996601-5996620 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 5993782 5998651 5993782 ID=MS.gene31098
chr2.4 mRNA 5993782 5998651 5993782 ID=MS.gene31098.t1;Parent=MS.gene31098
chr2.4 exon 5993782 5994436 5993782 ID=MS.gene31098.t1.exon1;Parent=MS.gene31098.t1
chr2.4 CDS 5993782 5994436 5993782 ID=cds.MS.gene31098.t1;Parent=MS.gene31098.t1
chr2.4 exon 5996590 5996663 5996590 ID=MS.gene31098.t1.exon2;Parent=MS.gene31098.t1
chr2.4 CDS 5996590 5996663 5996590 ID=cds.MS.gene31098.t1;Parent=MS.gene31098.t1
chr2.4 exon 5996736 5996866 5996736 ID=MS.gene31098.t1.exon3;Parent=MS.gene31098.t1
chr2.4 CDS 5996736 5996866 5996736 ID=cds.MS.gene31098.t1;Parent=MS.gene31098.t1
chr2.4 exon 5997101 5997197 5997101 ID=MS.gene31098.t1.exon4;Parent=MS.gene31098.t1
chr2.4 CDS 5997101 5997197 5997101 ID=cds.MS.gene31098.t1;Parent=MS.gene31098.t1
chr2.4 exon 5997929 5998090 5997929 ID=MS.gene31098.t1.exon5;Parent=MS.gene31098.t1
chr2.4 CDS 5997929 5998090 5997929 ID=cds.MS.gene31098.t1;Parent=MS.gene31098.t1
chr2.4 exon 5998173 5998267 5998173 ID=MS.gene31098.t1.exon6;Parent=MS.gene31098.t1
chr2.4 CDS 5998173 5998267 5998173 ID=cds.MS.gene31098.t1;Parent=MS.gene31098.t1
chr2.4 exon 5998555 5998651 5998555 ID=MS.gene31098.t1.exon7;Parent=MS.gene31098.t1
chr2.4 CDS 5998555 5998651 5998555 ID=cds.MS.gene31098.t1;Parent=MS.gene31098.t1
Gene Sequence

>MS.gene31098

ATGGCAACAACGTATCACCAACCAGCATCCCTCGAAGAAGTTCGAACCCTATGGATAGGCGATTTACAATACTGGGTAGACGAAAACTATCTCACACACTGCTTCTCCCACACCGGCGAAGTCATCTCCATCAAAATCATCCGCAACAAAATCACCGGCCAACCCGAAGGTTACGGTTTCATCGAATTTGTCTCCCACTCCGCCGCCGAACGCGTTCTTCAAACCTACAACGGCACTCAAATGCCTGGTACCGAACAAACCTTCCGTTTAAACTGGGCTTCCTTTGGTATCGGTGAACGCCGCCCTGATGCGGGTCCCGATCATTCAATATTTGTGGGTGATTTGGCTCCGGATGTTACGGATTATTTACTACAAGAGACTTTTAGGACTCATTATGGGAGTGTTCGTGGTGCGAAGGTTGTGACTGATCCGAATACTGGGAGGAGTAAGGGGTATGGGTTTGTTAAATTTAGTGATGAGAGTGAGAGGAATCGGGCTATGTCGGAAATGAATGGGGTTTATTGTTCTACTAGACCTATGAGGATTAGTGCTGCTACCCCCAAGAAAACTACGGGGTATCAGCAGAATCCTTATGCTGCTGCTGTTGGTGCTGTTGCTGTTGCTCCTGTTGTTGCTGCTGCTCCTGTTCCTAAAGGTATAACAAAACCCTAAGCTTTTTATAATTAGGATATGTTTGGATGAGTAGTTTAATTAAGTGCTTATAGTAGCATAAGTGTTTACACTGTTGGTGTTTATTTATAAATTATTGGGCAAACCGCTATCTTGGTTTCTGGAAGTGTAACTTGCTGTAACATTGGTCATTGAATGTATCGAAATTGCAAACACATTCACAAGTGTCTCTTTTATAAGTCATTTTTATAAGTAATTTTGGTTCTCAGAATATGTTGTTAGTAGTCAACAGAATCTGTTATTAGGTAGTCAATTTAGTCCCCAAAATTAATAACAAAAGAGACTACGATGTGTTTGCAATTCGATGCATTTAGGGGTTATAGTTTCAGCACCTCACACATTCAAGGACCAAAATGGTTGATTTGCCACAAGGTAATCTAGATAACCTATAAATTGTTTTCATATAAGTTATAAATTGTTTTTGTAACTTATCCTAGATAACTTCTGGAAATAAAGTGAAATTGGCTCATGGACATGTCATAACCTGATTCCGTAAGCTCTTTCAAGCAGACTTGGAAGGGTTTATGTTCTTAGGCAAGTTCAAATAAATCAATTCAAACAACCTTTTTTGGGCAGTAAGTTTAATTAAGTGCTTATAGTATAATTGTTTATCATGTTAGTAGTGCTTATGTATAAGTTATTGGGCAAACCACTATTTAGTTTTGTGGAAGTGTAATTCATTGTCACATTGGTCTCCCTGAATGTATCGAAATTGCAAACACACACATGTCTCTTTTATAAGTCATTTTGGTTCTCGAATCTGTTCTTAGGTAGTCTATTAGAGCTTATCTATTGAAGTAAACAACTTATGACACTTTTCACAAGCTTTTCTCAGCTTAATTTCATAAATTCTCCAAGATAGCTTATGAAAACAACTTATAGCATATACAAACAACAATTTAACTTTATTTTATATGTTCCTATATTAAGCTTATATATAAGCACTTATCATGATAAACGCTTGTTCTATATGCTGCAAACAAGCTGCTTATCCAAATAGGGATAGTCGCCAATTACGTTTTTCGTTTGTCAATTTAGTCCATAAAATTACTAACAGAAGAGACAATGGGGATGTTTTTGCGATTTCGATACATTTAGGGATTAGTGTCAGCGCCTCACACATTCAAGGACCAAAATGGTTGTTTTGCTGTAAGTTATTCTATAGAAAAAGATGAAATAAAGTCAAATTGTTTCGTATAAATTATAAGTTATTTTTATATGCTATCTTGGATAACTTATGGAAATAAAATGAAATTGGCTTATGGACATGTCATAAACTGTTTTCGTAAGCTCTTTCAAACAAACTCACAAGGGTTTACTTTATACTAGTAGATAGGTTCAAATAAATTAATCCAAATAGCCCTAATTTTCAATGCAATGTGTTTTTCAGCTTTACCTTGTGAGTTATGACCATAACATTCAACAACGCTCTATTTCATATGTAGTTTTAATTCTCTATCTTTAGTGATTGAGTGTAAGAAAATTGTACATGACCGGCGTCACTATATAGTTTGTACTTGTGAATGGGTTTCTGGTTAAAGACTTACATTGTTATCTATAAGCCTGTTTGATTGAAAATTTGCCGTGTTGATGATTGATGGAATGGTACTAATTGTTGTTGTTGAGACTGTTCAAAATATGATAGAATCAGAATGGTATGTAAAGGAATTTATATTCTATCACATTCCGTCCCGTTTCTCTATTTTTCTTGTACCTATATGGGTTTAAGATGGAACTTACTTGTTTATTAATCTCCTTACAATTACATTCACTTCTCGAACTTTGGAAAGAAAGCTTTTCAACTTTTCCTTTGTATAGGCATGGTATGTTCTTATTCATAAAAAAACTATTCCATTCTATTTTTTCTTATTTCACTTGATATCCAACTTTAGCCTTGAGGTTCTAAAATTTGCATGCCTTCTTTTTACCCTACCAAGGTTATGCAATCCTTTAAATTTCAAATATTGTTAGTCATATAGATATGTATTTCATGATGTGACTAGAACCTTCCTAGGACAAAGTCTTGCATTTGAAGTTGAAACTTTGATCTTTTTGGTGTTCTGATATTTTGATTTAGTACAACTTAGGAAAGATACTTATCTATGATTTCCTTGGCAGCAATATATCCAGTGCCGGCATACACCGCCCCAGTGAATACAGTTCCACCAGAATACGATGTAAACAATACGACTGTAAGTCCTGTAGCCGTAACATTTTTGAAATTTTCATTTCCTATGGTGCTCTTACATACTTTTGCAATGCAGCTTTATGTTGGTAATTTGGATCTTAATGTCTCAGAGGAGGAGCTGAAGCAAAACTTTTTGCAATTTGGAGAGATTGTTTCTGTCAAAGTTCATCCCGGCAAAGCATGTGGTTTTGTTCAATTTGGGGCTAGGTCTTCTTTTCCTCTCTAATCTCTTTTTAAGCATTGAAGTGTTTTTGTGATTTTTTTTTAAAATTGTAACTAAAAAGTAATGATAAGATTTTGATATGTTGCCTCTCAAAGGAAATAAGTTTCACGTGGCCCTAATTTACCATGCATCTTGAGTATTTTTACGATCTTTATATTTTTTCCTTAATTCTATTATGTGAATGTTCATTTAATCTTTCTCATATCTGATGTCTGTAGAGCATCTGCTGAAGAAGCCATTCAGAAGATGCAGGGAAAGATATTAGGTCAACAAATGATCCGAGTTTCTTGGGGTAGGCCCCAAACAGCTAGACAGGTATTTTTTCTTTAGAAATGGTTCATTTCTTTACAAAGTACTTAAGCTATAGCCTTGTGCATTTGTGTATATCAATCATTTCAATTTCAGATATTCTTTCAATGTAGAATCATAGATTACAAATCGTCCATATTTGTTTAGGTTTTTAACATAGGACCCATACATGGGGTTCTATTCTAGTATAATTTTTATTGCCCTTTTTATGTATTGTTATGCTTTTATGTAGAAGTTTGTTTGTTAGGACATGTGTGGAAAATATTCTAGATTCTAGTTCTACTGAGCAATCTTGAAATTGTGAAGGTTTGGCAACTTGTGAATGGCCAATGTGGGACATTGAGAGACCCTTACATGGGTCAATACTTAATGGTTAAAGACTAAAACAGGAAATGATATCCCAGGAGTCATATGTATAGATATGGTTGTTGAAGGTTCAGTAAAAAAGTTAGACTGTAACAATAGATATGTATTGATATGGAGGACGTCAATTAGTGTTTATTGATAATTCGAATTTAGGCTTGGTCTTCTTGATTCTTGATGTATAATTTGCTAATATTAGCAACGACCCCTTGTGATAACTACAAACTTCCATCATAACAAACTTTATCTAAATATTAAAAATACTTGAGATTATATGTCAGTGAGTTTTGATATCTCTGATTAGTTCTATAAGTGTCTCATCATGTTTGAAGTGTTATATTTGCACTAATAAATTTGGTTCTAAATGGTTCTAGGACGTACCTGGAGGATGGGGACAACAGGTGGATCAAAGTCAATGGAGTGCATACTATGGGTATGGACAGCCGGGTTATGAAGCTTATGCATATGGGGCTGCTCAGGATCCTTCAATGTATGCATATGCTGGATATGCTGGCTATGCACAATACCCGCAACAGGTAAGTTATATAATTTTAAATTTACATATTGCATTGGTTCATATTGAAGGGAATGACTTTATCTGACTACTTATGTTCGTAGGTTGAAGGTGCTCAAGACGTATCAGCTATGTCTGTGCCTACCTTGGAACAAAGGGAAGAGTTGTATGATCCTCTGGCAATGCCCGCTGTTGATAAGTAATTTCCCTCCTTTCTTTTTATAACATGGGAGATAAACAACTGAACACGAGATATTGACGGATCCGGATTGTATGCAGTCTTGCAGTCGGTCCATTTCTGACCATCCGACGGCCCAGATTTAAATCTCATATTTAGATTTAATAAAACGAATACAATCTGCTTTAAATATAGACCATCCGATCTAAATCGGACGGCAAAAAAGGGCCGACTGCATGATTGCATGTAATCTGGATCCCATATTGACTTCATGTGCATTTCTGACATGTCCTTGATTGCTTTGCCAGGTTAAATGCTGCATATCTCTCAGTCCACGGAAATGCCATTTTAGGGCGGTCCCTCTGGCACAAAACCCATTCCTCATCCTTGCAGCAGCAAGCTTAG
Protein sequence

>MS.gene31098.t1

MATTYHQPASLEEVRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYGSVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGYQQNPYAAAVGAVAVAPVVAAAPVPKAIYPVPAYTAPVNTVPPEYDVNNTTLYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKMQGKILGQQMIRVSWGRPQTARQDVPGGWGQQVDQSQWSAYYGYGQPGYEAYAYGAAQDPSMYAYAGYAGYAQYPQQVEGAQDVSAMSVPTLEQREELYDPLAMPAVDKLNAAYLSVHGNAILGRSLWHKTHSSSLQQQA