AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31115

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31115.t1 MTR_2g097700 93.199 794 40 4 1 793 1 781 0.0 1465
MS.gene31115.t1 MTR_4g064780 78.582 691 148 0 103 793 114 804 0.0 1179
MS.gene31115.t1 MTR_4g064780 75.568 528 129 0 103 630 114 641 0.0 872
MS.gene31115.t1 MTR_5g013940 89.000 100 11 0 628 727 20 119 6.23e-57 192
MS.gene31115.t1 MTR_2g098110 24.597 496 315 19 293 777 210 657 4.49e-24 108
MS.gene31115.t1 MTR_1g070230 31.156 199 110 7 588 777 157 337 3.66e-13 72.0
MS.gene31115.t1 MTR_2g087590 30.968 155 92 3 628 777 200 344 1.75e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31115.t1 AT3G46740 76.232 690 164 0 104 793 129 818 0.0 1151
MS.gene31115.t1 AT4G09080 62.169 415 136 7 381 793 1 396 4.97e-171 498
MS.gene31115.t1 AT4G09080 62.169 415 136 7 381 793 12 407 9.52e-171 498
MS.gene31115.t1 AT4G09080 70.462 325 93 3 471 793 2 325 4.11e-160 468
MS.gene31115.t1 AT1G35860 49.419 516 138 8 257 768 3 399 2.80e-155 458
MS.gene31115.t1 AT5G19620 24.597 496 325 15 293 781 269 722 3.55e-25 112
MS.gene31115.t1 AT3G44160 28.194 227 131 8 539 749 102 312 2.53e-13 72.8

Find 261 sgRNAs with CRISPR-Local

Find 389 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2.4:+6176435 MS.gene31115:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2.4:-6177012 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2.4:-6179688 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2.4:-6176707 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2.4:+6176550 MS.gene31115:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2.4:-6179645 None:intergenic
AGGCATAATTGTTGAAATTA+AGG 0.242334 2.4:+6177115 MS.gene31115:CDS
GGTGGTGGAGGTTGGTGGTT+TGG 0.263241 2.4:+6175857 MS.gene31115:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2.4:+6176102 MS.gene31115:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2.4:+6180004 MS.gene31115:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2.4:+6176488 MS.gene31115:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2.4:-6176706 None:intergenic
GGAGTATGCACATCCATATT+TGG 0.314750 2.4:+6177563 MS.gene31115:CDS
TGGATGAAGTGCCACCAATA+TGG 0.315749 2.4:+6177676 MS.gene31115:CDS
TTATCTACACCATCCAAATA+TGG 0.337762 2.4:-6177576 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.339047 2.4:-6177402 None:intergenic
GTGGCAGTGGTGGTGGAGGT+TGG 0.339631 2.4:+6175849 MS.gene31115:CDS
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2.4:+6179637 MS.gene31115:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2.4:-6176430 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2.4:+6176436 MS.gene31115:CDS
GGTGGAGGTTGGTGGTTTGG+AGG 0.353180 2.4:+6175860 MS.gene31115:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2.4:+6177836 MS.gene31115:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2.4:+6176426 MS.gene31115:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.368723 2.4:+6175842 MS.gene31115:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2.4:+6179809 MS.gene31115:CDS
AACCTCACAAACAACCTCTT+TGG 0.380682 2.4:-6176584 None:intergenic
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2.4:+6179920 MS.gene31115:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2.4:+6175881 MS.gene31115:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2.4:+6179851 MS.gene31115:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2.4:+6175878 MS.gene31115:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2.4:+6176495 MS.gene31115:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2.4:+6177893 MS.gene31115:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2.4:+6176377 MS.gene31115:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2.4:+6176187 MS.gene31115:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2.4:+6176245 MS.gene31115:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2.4:+6176470 MS.gene31115:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2.4:-6179821 None:intergenic
GCAGTGGTGGTGGAGGTTGG+TGG 0.409155 2.4:+6175852 MS.gene31115:CDS
ATTCACTTATGGACTTGTAA+TGG 0.409835 2.4:+6177847 MS.gene31115:CDS
CCACCGCGATCAACCCATAT+TGG 0.412791 2.4:-6177690 None:intergenic
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2.4:+6175869 MS.gene31115:CDS
GGTGGTGGACATGGTGGTGG+TGG 0.415456 2.4:+6175818 MS.gene31115:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2.4:+6176103 MS.gene31115:CDS
CATGGTGGTGGTGGAAGTAA+TGG 0.420049 2.4:+6175827 MS.gene31115:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2.4:-6179483 None:intergenic
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2.4:-6177089 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2.4:-6179476 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2.4:+6177008 MS.gene31115:CDS
TGAATACTGGACTCAGCTTT+CGG 0.430080 2.4:-6177638 None:intergenic
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2.4:+6175815 MS.gene31115:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2.4:-6179524 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2.4:-6175756 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2.4:+6175839 MS.gene31115:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2.4:+6179638 MS.gene31115:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2.4:+6179795 MS.gene31115:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2.4:+6176141 MS.gene31115:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2.4:-6175750 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2.4:+6176983 MS.gene31115:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2.4:+6177959 MS.gene31115:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2.4:-6175983 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2.4:+6179926 MS.gene31115:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2.4:-6177095 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2.4:-6175732 None:intergenic
GGAGGTTGGTGGTTTGGAGG+AGG 0.457441 2.4:+6175863 MS.gene31115:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2.4:-6179482 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2.4:+6179943 MS.gene31115:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2.4:-6179951 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2.4:+6176634 MS.gene31115:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2.4:+6179573 MS.gene31115:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2.4:-6177411 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2.4:+6175875 MS.gene31115:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2.4:-6175791 None:intergenic
TGGTGGCACTTCATCCAGCC+CGG 0.473493 2.4:-6177670 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2.4:-6175708 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2.4:+6177542 MS.gene31115:intron
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2.4:-6179567 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2.4:+6176520 MS.gene31115:CDS
TTTGCGACGGCCGGACAAGA+TGG 0.480747 2.4:-6175636 None:intergenic
GTTGATCATAACTCAGGAAC+TGG 0.481477 2.4:+6179983 MS.gene31115:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2.4:+6179938 MS.gene31115:CDS
GGTTACAACATGGGTGAACT+TGG 0.484076 2.4:+6179660 MS.gene31115:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2.4:-6175738 None:intergenic
AAGCTGAGTCCAGTATTCAC+TGG 0.485593 2.4:+6177642 MS.gene31115:CDS
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2.4:+6176489 MS.gene31115:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2.4:-6177600 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2.4:+6177127 MS.gene31115:CDS
CACAACCACCATAGCGGCCA+TGG 0.488369 2.4:-6179581 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2.4:+6175836 MS.gene31115:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2.4:+6177320 MS.gene31115:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2.4:-6175792 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2.4:+6176360 MS.gene31115:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2.4:+6175956 MS.gene31115:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2.4:-6175731 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2.4:+6176160 MS.gene31115:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2.4:-6177191 None:intergenic
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2.4:-6175709 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2.4:+6178034 MS.gene31115:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2.4:-6179899 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2.4:+6179564 MS.gene31115:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2.4:+6175803 MS.gene31115:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2.4:-6175679 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2.4:+6176384 MS.gene31115:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2.4:+6179894 MS.gene31115:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2.4:+6175797 MS.gene31115:CDS
AGCTGAGTCCAGTATTCACT+GGG 0.498536 2.4:+6177643 MS.gene31115:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2.4:+6179650 MS.gene31115:CDS
GGTGGCACTTCATCCAGCCC+GGG 0.498938 2.4:-6177669 None:intergenic
AACAGCTTACATGAAGAGTT+CGG 0.499486 2.4:-6177608 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2.4:-6175680 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2.4:+6179824 MS.gene31115:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2.4:-6179644 None:intergenic
TTCGGCGGCACCATCTTGTC+CGG 0.504504 2.4:+6175626 MS.gene31115:CDS
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2.4:+6176280 MS.gene31115:CDS
GAAGCTCTCTATGTATCAAA+GGG 0.505503 2.4:-6176684 None:intergenic
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2.4:+6176455 MS.gene31115:CDS
GGATGAAGTGCCACCAATAT+GGG 0.507612 2.4:+6177677 MS.gene31115:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2.4:-6176322 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2.4:+6176222 MS.gene31115:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.515685 2.4:-6175618 None:intergenic
AACACCACTGGTGGTGGACA+TGG 0.516543 2.4:+6175809 MS.gene31115:CDS
AATGGTGGCAGTGGTGGTGG+AGG 0.516851 2.4:+6175845 MS.gene31115:CDS
GGAAGCTCTCTATGTATCAA+AGG 0.517152 2.4:-6176685 None:intergenic
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2.4:+6176188 MS.gene31115:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2.4:+6178054 MS.gene31115:CDS
CAGAAGTACAATACCAGAGT+TGG 0.521701 2.4:-6177209 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2.4:+6179438 MS.gene31115:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2.4:+6176214 MS.gene31115:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2.4:+6179902 MS.gene31115:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2.4:+6177159 MS.gene31115:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2.4:-6175718 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2.4:-6175774 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2.4:+6179450 MS.gene31115:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2.4:+6179639 MS.gene31115:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.535781 2.4:+6176592 MS.gene31115:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2.4:+6175608 MS.gene31115:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2.4:-6177963 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2.4:+6179872 MS.gene31115:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2.4:-6175762 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2.4:+6179908 MS.gene31115:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2.4:+6176390 MS.gene31115:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2.4:-6179615 None:intergenic
GCAGACAAAGCCGATTGAGT+TGG 0.539592 2.4:+6176312 MS.gene31115:CDS
TACCAAAGAGGTTGTTTGTG+AGG 0.542702 2.4:+6176582 MS.gene31115:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2.4:-6175799 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2.4:+6176984 MS.gene31115:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2.4:+6176540 MS.gene31115:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2.4:-6175778 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2.4:+6179680 MS.gene31115:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2.4:+6179901 MS.gene31115:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2.4:-6177959 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2.4:+6176338 MS.gene31115:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2.4:+6176174 MS.gene31115:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2.4:+6179576 MS.gene31115:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2.4:+6176395 MS.gene31115:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2.4:-6175741 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2.4:+6179873 MS.gene31115:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2.4:+6177950 MS.gene31115:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2.4:+6179444 MS.gene31115:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2.4:+6177196 MS.gene31115:CDS
TGGAAATCTTAATACCAAAG+AGG 0.562046 2.4:+6176570 MS.gene31115:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2.4:-6175768 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2.4:-6175672 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2.4:-6175671 None:intergenic
CCGCGATCAACCCATATTGG+TGG 0.564600 2.4:-6177687 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2.4:-6176121 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2.4:+6176649 MS.gene31115:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2.4:-6179461 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2.4:-6179563 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2.4:+6179518 MS.gene31115:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2.4:+6176135 MS.gene31115:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2.4:-6175926 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2.4:+6176119 MS.gene31115:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2.4:-6175704 None:intergenic
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2.4:-6175744 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2.4:+6177412 MS.gene31115:CDS
GGATGGAACGAGAGAAGACA+TGG 0.579164 2.4:-6175597 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2.4:+6176380 MS.gene31115:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2.4:+6177356 MS.gene31115:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2.4:-6176418 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2.4:-6176221 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2.4:+6176365 MS.gene31115:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2.4:+6177072 MS.gene31115:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2.4:-6177190 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2.4:+6177173 MS.gene31115:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2.4:+6179525 MS.gene31115:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2.4:+6176693 MS.gene31115:CDS
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2.4:+6175872 MS.gene31115:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2.4:+6175800 MS.gene31115:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2.4:+6179531 MS.gene31115:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2.4:-6175733 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2.4:+6176246 MS.gene31115:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2.4:+6177179 MS.gene31115:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2.4:-6176437 None:intergenic
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2.4:-6175759 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2.4:+6176333 MS.gene31115:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2.4:-6179475 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2.4:+6179585 MS.gene31115:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2.4:+6179651 MS.gene31115:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2.4:-6179561 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.598647 2.4:+6177377 MS.gene31115:CDS
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2.4:-6179497 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2.4:+6177932 MS.gene31115:CDS
TGGTACTGGCATTGATCACA+TGG 0.604743 2.4:+6177973 MS.gene31115:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2.4:+6177567 MS.gene31115:CDS
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2.4:+6176366 MS.gene31115:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2.4:+6177917 MS.gene31115:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2.4:-6175614 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2.4:-6179500 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2.4:-6179898 None:intergenic
AACTCAATCGGCTTTGTCTG+CGG 0.610651 2.4:-6176310 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2.4:-6177956 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2.4:+6176446 MS.gene31115:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2.4:-6179562 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2.4:+6177183 MS.gene31115:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2.4:-6175813 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2.4:+6175812 MS.gene31115:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2.4:+6177139 MS.gene31115:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2.4:+6177182 MS.gene31115:CDS
GTGGCACTTCATCCAGCCCG+GGG 0.624430 2.4:-6177668 None:intergenic
CCATGGAGGACAAGAACTGG+CGG 0.627462 2.4:-6179564 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2.4:+6179862 MS.gene31115:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2.4:+6176521 MS.gene31115:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2.4:+6179521 MS.gene31115:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2.4:+6177092 MS.gene31115:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2.4:+6176205 MS.gene31115:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2.4:+6179977 MS.gene31115:CDS
TGATATGACTGAGAAGGAGA+GGG 0.631555 2.4:+6176339 MS.gene31115:CDS
GACTGAATAGAGCTCTTAGT+GGG 0.631710 2.4:+6177378 MS.gene31115:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2.4:+6176506 MS.gene31115:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2.4:+6177872 MS.gene31115:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2.4:+6177323 MS.gene31115:intron
TCAATATTAAAGGTGTTACC+CGG 0.639699 2.4:-6177002 None:intergenic
GGTGGTGGTGGAAGTAATGG+TGG 0.642772 2.4:+6175830 MS.gene31115:CDS
ACACCTTTAATATTGAAGCA+GGG 0.649166 2.4:+6177009 MS.gene31115:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2.4:+6176249 MS.gene31115:CDS
CCAATATGGGTTGATCGCGG+TGG 0.652292 2.4:+6177690 MS.gene31115:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2.4:-6179981 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2.4:-6177338 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2.4:+6177091 MS.gene31115:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2.4:+6177095 MS.gene31115:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2.4:+6175998 MS.gene31115:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2.4:+6175611 MS.gene31115:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2.4:-6177327 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2.4:+6179496 MS.gene31115:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2.4:+6177911 MS.gene31115:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2.4:+6176120 MS.gene31115:CDS
CCACCAATATGGGTTGATCG+CGG 0.691172 2.4:+6177687 MS.gene31115:CDS
TGTCAAAGCTAATATTACAG+AGG 0.693959 2.4:+6177713 MS.gene31115:CDS
CTGAGTCCAGTATTCACTGG+GGG 0.694649 2.4:+6177645 MS.gene31115:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2.4:-6179587 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2.4:-6179578 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2.4:-6177929 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2.4:+6177953 MS.gene31115:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2.4:+6176106 MS.gene31115:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2.4:-6177836 None:intergenic
AAGCTCTCTATGTATCAAAG+GGG 0.754570 2.4:-6176683 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2.4:+6177914 MS.gene31115:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2.4:+6179683 MS.gene31115:CDS
GATCAATGCCAGTACCACCG+AGG 0.774073 2.4:-6177967 None:intergenic
GCTGAGTCCAGTATTCACTG+GGG 0.777122 2.4:+6177644 MS.gene31115:CDS
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2.4:-6175715 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG + chr2.4:6179290-6179309 MS.gene31115:intron 0.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr2.4:6179263-6179282 None:intergenic 10.0%
!! AAAAAAAAAAAAAAATCCCT+TGG - chr2.4:6177264-6177283 None:intergenic 15.0%
!! AACATAATTGATTACTAAAA+AGG + chr2.4:6179199-6179218 MS.gene31115:intron 15.0%
!! AATATTATATTATACCTCTT+TGG - chr2.4:6176710-6176729 None:intergenic 15.0%
!! ATATTATATTATACCTCTTT+GGG - chr2.4:6176709-6176728 None:intergenic 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG - chr2.4:6178890-6178909 None:intergenic 15.0%
!! TTGTTATCTGTTATATATAT+GGG + chr2.4:6176760-6176779 MS.gene31115:intron 15.0%
!!! AATAATTGATATTTCTAGTA+TGG + chr2.4:6176827-6176846 MS.gene31115:intron 15.0%
!!! CACATTAAAAAATTTGTTTT+AGG + chr2.4:6179314-6179333 MS.gene31115:intron 15.0%
!!! CTAAAACAAATTTTTTAATG+TGG - chr2.4:6179316-6179335 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr2.4:6179139-6179158 None:intergenic 15.0%
!!! TATTTTTACATGAACTATTT+AGG + chr2.4:6177755-6177774 MS.gene31115:intron 15.0%
!! AAGGCTTAAAGATAATAAAA+AGG - chr2.4:6178170-6178189 None:intergenic 20.0%
!! AATTGAATAGTTATATTGAC+AGG - chr2.4:6175986-6176005 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG - chr2.4:6178322-6178341 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG - chr2.4:6178189-6178208 None:intergenic 20.0%
!! ATTGAAATGAAAGAACATTT+AGG - chr2.4:6178396-6178415 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG + chr2.4:6179113-6179132 MS.gene31115:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG - chr2.4:6178136-6178155 None:intergenic 20.0%
!! GTTGTTATCTGTTATATATA+TGG + chr2.4:6176759-6176778 MS.gene31115:intron 20.0%
!! TTGAAATGAAAGAACATTTA+GGG - chr2.4:6178395-6178414 None:intergenic 20.0%
!! TTTACCAATACAATTATAAG+AGG - chr2.4:6178196-6178215 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG + chr2.4:6178134-6178153 MS.gene31115:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG + chr2.4:6177488-6177507 MS.gene31115:intron 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG + chr2.4:6178189-6178208 MS.gene31115:intron 20.0%
!!! TTTTTTCACACATAATTTTG+AGG - chr2.4:6179113-6179132 None:intergenic 20.0%
! AAAAAAAAAAAATCCCTTGG+TGG - chr2.4:6177261-6177280 None:intergenic 25.0%
! AAGTTTCGTTGTATTAATGT+TGG + chr2.4:6176280-6176299 MS.gene31115:CDS 25.0%
! AGAAAAAAATAGTCCATCAA+CGG - chr2.4:6178453-6178472 None:intergenic 25.0%
! AGGCAAATAATCATTGAAAT+TGG - chr2.4:6176863-6176882 None:intergenic 25.0%
! AGGCATAATTGTTGAAATTA+AGG + chr2.4:6177115-6177134 MS.gene31115:CDS 25.0%
! AGTCTTAAATAGAAAACATC+AGG - chr2.4:6179362-6179381 None:intergenic 25.0%
! CTTTGGATCAATATAAAAGT+TGG + chr2.4:6178563-6178582 MS.gene31115:intron 25.0%
! GGATATATAAGACTGAATAT+TGG - chr2.4:6178301-6178320 None:intergenic 25.0%
! GTCTTAAATAGAAAACATCA+GGG - chr2.4:6179361-6179380 None:intergenic 25.0%
! TGAAATGATTTCTATTGTTC+CGG + chr2.4:6176102-6176121 MS.gene31115:CDS 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG + chr2.4:6177127-6177146 MS.gene31115:CDS 25.0%
! TGATAAAGAATCATAAAACG+AGG - chr2.4:6179722-6179741 None:intergenic 25.0%
! TTATCTGTTATATATATGGG+AGG + chr2.4:6176763-6176782 MS.gene31115:intron 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr2.4:6179133-6179152 MS.gene31115:intron 25.0%
!! CAACTTTTATATTGATCCAA+AGG - chr2.4:6178565-6178584 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG + chr2.4:6179428-6179447 MS.gene31115:intron 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG + chr2.4:6177304-6177323 MS.gene31115:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG - chr2.4:6178714-6178733 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG + chr2.4:6177061-6177080 MS.gene31115:CDS 25.0%
AAAAAGGCTTCAATTACTCT+TGG + chr2.4:6179215-6179234 MS.gene31115:intron 30.0%
AACACCTTTAATATTGAAGC+AGG + chr2.4:6177008-6177027 MS.gene31115:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG + chr2.4:6176061-6176080 MS.gene31115:CDS 30.0%
ACACCTTTAATATTGAAGCA+GGG + chr2.4:6177009-6177028 MS.gene31115:CDS 30.0%
ACATGAACTATTTAGGCTAA+TGG + chr2.4:6177762-6177781 MS.gene31115:intron 30.0%
ATATCAGAATCCAACTCAAT+CGG - chr2.4:6176325-6176344 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG + chr2.4:6178414-6178433 MS.gene31115:intron 30.0%
ATCTAGTGGAATGTTTGAAA+AGG + chr2.4:6176174-6176193 MS.gene31115:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG + chr2.4:6175998-6176017 MS.gene31115:CDS 30.0%
ATTCACTTATGGACTTGTAA+TGG + chr2.4:6177847-6177866 MS.gene31115:CDS 30.0%
CAATGATTATTTGCCTGTTT+AGG + chr2.4:6176867-6176886 MS.gene31115:intron 30.0%
GAAATGATTTCTATTGTTCC+GGG + chr2.4:6176103-6176122 MS.gene31115:CDS 30.0%
GGTAATCAAATTTGTGCAAA+TGG + chr2.4:6177893-6177912 MS.gene31115:CDS 30.0%
GTAAACCTATCTACAAAGAT+AGG + chr2.4:6178589-6178608 MS.gene31115:intron 30.0%
GTAGTCACATAAAACAAGAT+AGG - chr2.4:6178219-6178238 None:intergenic 30.0%
GTTAACCATAGGATCTAAAT+AGG - chr2.4:6178422-6178441 None:intergenic 30.0%
TATATATATGGGAGGTTCAT+AGG + chr2.4:6176771-6176790 MS.gene31115:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG + chr2.4:6176931-6176950 MS.gene31115:intron 30.0%
TCTGAAGAATTTGATTCTCA+TGG + chr2.4:6175956-6175975 MS.gene31115:CDS 30.0%
TGGAAATCTTAATACCAAAG+AGG + chr2.4:6176570-6176589 MS.gene31115:CDS 30.0%
TGTCAAAGCTAATATTACAG+AGG + chr2.4:6177713-6177732 MS.gene31115:CDS 30.0%
TTATCTACACCATCCAAATA+TGG - chr2.4:6177579-6177598 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG - chr2.4:6178356-6178375 None:intergenic 30.0%
! ACAAGATATCTATGTTTTCC+AGG + chr2.4:6179047-6179066 MS.gene31115:intron 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG - chr2.4:6178092-6178111 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG + chr2.4:6179618-6179637 MS.gene31115:CDS 30.0%
! CAAGATATCTATGTTTTCCA+GGG + chr2.4:6179048-6179067 MS.gene31115:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG + chr2.4:6178935-6178954 MS.gene31115:intron 30.0%
! GGTGCATTATATTTACGTTT+TGG + chr2.4:6180004-6180023 MS.gene31115:CDS 30.0%
! TAAAACCAATGAGCAGTTTT+AGG - chr2.4:6176939-6176958 None:intergenic 30.0%
! TATTTGCCTGTTTAGGATAT+CGG + chr2.4:6176874-6176893 MS.gene31115:intron 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG + chr2.4:6176188-6176207 MS.gene31115:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG + chr2.4:6176187-6176206 MS.gene31115:CDS 30.0%
!! AGAGTAAAAGCATCATAACT+TGG - chr2.4:6179618-6179637 None:intergenic 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG + chr2.4:6177345-6177364 MS.gene31115:CDS 30.0%
!! TCAATATTAAAGGTGTTACC+CGG - chr2.4:6177005-6177024 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG + chr2.4:6178100-6178119 MS.gene31115:intron 30.0%
!! TTCATATAGTGAGAGTACTT+GGG + chr2.4:6176246-6176265 MS.gene31115:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG + chr2.4:6176245-6176264 MS.gene31115:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG + chr2.4:6180011-6180030 MS.gene31115:CDS 30.0%
AAAAAATAGTCCATCAACGG+AGG - chr2.4:6178450-6178469 None:intergenic 35.0%
AAAAGAGATGGATCAGAAGA+CGG + chr2.4:6177139-6177158 MS.gene31115:CDS 35.0%
AACAGCTTACATGAAGAGTT+CGG - chr2.4:6177611-6177630 None:intergenic 35.0%
AAGCTCTCTATGTATCAAAG+GGG - chr2.4:6176686-6176705 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG - chr2.4:6178944-6178963 None:intergenic 35.0%
AATGTGTAGTTAGAGCTCAA+TGG - chr2.4:6178980-6178999 None:intergenic 35.0%
ACAAAGATAGGAGTAGTAGA+GGG + chr2.4:6178601-6178620 MS.gene31115:intron 35.0%
ACCCATAATCTCCAAATGAA+CGG - chr2.4:6176440-6176459 None:intergenic 35.0%
ACCGTTCATTTGGAGATTAT+GGG + chr2.4:6176436-6176455 MS.gene31115:CDS 35.0%
ACTTGTCTAGTTGTATCCTT+TGG + chr2.4:6178546-6178565 MS.gene31115:intron 35.0%
AGAAGTGGTATCATGATCAA+GGG + chr2.4:6176521-6176540 MS.gene31115:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG - chr2.4:6179984-6180003 None:intergenic 35.0%
ATCTCCAAATGAACGGTATT+CGG - chr2.4:6176433-6176452 None:intergenic 35.0%
CATAGATATCTTGTCCTCAA+AGG - chr2.4:6179041-6179060 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG + chr2.4:6177836-6177855 MS.gene31115:CDS 35.0%
CCATAAGTGAATTTACTCTG+TGG - chr2.4:6177839-6177858 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG + chr2.4:6177072-6177091 MS.gene31115:CDS 35.0%
CTACTCCTATCTTTGTAGAT+AGG - chr2.4:6178597-6178616 None:intergenic 35.0%
CTTCCCTGCTTCAATATTAA+AGG - chr2.4:6177015-6177034 None:intergenic 35.0%
GAAGCTCTCTATGTATCAAA+GGG - chr2.4:6176687-6176706 None:intergenic 35.0%
GAAGTTCAAAGGATGTCAAA+GGG + chr2.4:6179873-6179892 MS.gene31115:CDS 35.0%
GAATGATCTAGGAAGTTCAA+AGG + chr2.4:6179862-6179881 MS.gene31115:CDS 35.0%
GGATGATCTTGCATTTAAGA+TGG + chr2.4:6177542-6177561 MS.gene31115:intron 35.0%
GTTCAGTTCATTGATAAGCT+TGG + chr2.4:6176634-6176653 MS.gene31115:CDS 35.0%
TAAATAGAAAACATCAGGGC+CGG - chr2.4:6179357-6179376 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG + chr2.4:6178600-6178619 MS.gene31115:intron 35.0%
TACCGTTCATTTGGAGATTA+TGG + chr2.4:6176435-6176454 MS.gene31115:CDS 35.0%
TAGGTTGTTGCAGAAGATTA+GGG + chr2.4:6176489-6176508 MS.gene31115:CDS 35.0%
TAGTCTATAGTGTGCTATAG+CGG + chr2.4:6178648-6178667 MS.gene31115:intron 35.0%
TATGCACATCCATATTTGGA+TGG + chr2.4:6177567-6177586 MS.gene31115:CDS 35.0%
TCAAAAGAAATAGTTCCACC+AGG - chr2.4:6177341-6177360 None:intergenic 35.0%
TCAGTGAACACTTCAATTCA+TGG + chr2.4:6179001-6179020 MS.gene31115:intron 35.0%
TGTAACCCCTTACAGAATAA+GGG - chr2.4:6179647-6179666 None:intergenic 35.0%
TTGGATAGTTTGACATCTAG+TGG + chr2.4:6176160-6176179 MS.gene31115:CDS 35.0%
TTGTAACCCCTTACAGAATA+AGG - chr2.4:6179648-6179667 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG + chr2.4:6178943-6178962 MS.gene31115:intron 35.0%
! ATTTGCCTGTTTAGGATATC+GGG + chr2.4:6176875-6176894 MS.gene31115:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG + chr2.4:6177245-6177264 MS.gene31115:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG + chr2.4:6176965-6176984 MS.gene31115:intron 35.0%
! CCGACATCATATAATGGAAA+AGG - chr2.4:6178938-6178957 None:intergenic 35.0%
! GATAACACACGTTTTGTGAA+TGG + chr2.4:6178022-6178041 MS.gene31115:CDS 35.0%
! TATGATGCTTTTACTCTTGG+TGG + chr2.4:6179621-6179640 MS.gene31115:CDS 35.0%
! TCAATTTTCTACAACCACCA+AGG + chr2.4:6177244-6177263 MS.gene31115:intron 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG + chr2.4:6176550-6176569 MS.gene31115:CDS 35.0%
! TTAACATTTTCCTCCGTTGA+TGG + chr2.4:6178437-6178456 MS.gene31115:intron 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG + chr2.4:6177521-6177540 MS.gene31115:intron 35.0%
!! TAATCAGAAAGCATTGTCAC+AGG - chr2.4:6179403-6179422 None:intergenic 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG + chr2.4:6176952-6176971 MS.gene31115:intron 35.0%
!!! GTTTGTTGTTGTTTTTGCGA+CGG - chr2.4:6175652-6175671 None:intergenic 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG + chr2.4:6175907-6175926 MS.gene31115:CDS 35.0%
AACAACCCGATATCCTAAAC+AGG - chr2.4:6176883-6176902 None:intergenic 40.0%
AACAGTATTTGAGTCAGGAG+AGG + chr2.4:6176365-6176384 MS.gene31115:CDS 40.0%
AACCTCACAAACAACCTCTT+TGG - chr2.4:6176587-6176606 None:intergenic 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG + chr2.4:6176470-6176489 MS.gene31115:CDS 40.0%
AAGCTTGGCAATGTTGTTGA+AGG + chr2.4:6176649-6176668 MS.gene31115:CDS 40.0%
AATGAAGAATCTCAGCAGAC+TGG - chr2.4:6177448-6177467 None:intergenic 40.0%
ACAGAAGTCTATAGGCGAAT+GGG + chr2.4:6179902-6179921 MS.gene31115:CDS 40.0%
ACAGTATTTGAGTCAGGAGA+GGG + chr2.4:6176366-6176385 MS.gene31115:CDS 40.0%
ACGGTATTCGGCAAAATACA+CGG - chr2.4:6176421-6176440 None:intergenic 40.0%
ATGATTTCTATTGTTCCGGG+CGG + chr2.4:6176106-6176125 MS.gene31115:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG + chr2.4:6179920-6179939 MS.gene31115:CDS 40.0%
ATTCGCCTATAGACTTCTGT+AGG - chr2.4:6179902-6179921 None:intergenic 40.0%
CAAGGTTCATCTTATGGTGT+TGG + chr2.4:6179926-6179945 MS.gene31115:CDS 40.0%
CAGAAGTGGTATCATGATCA+AGG + chr2.4:6176520-6176539 MS.gene31115:CDS 40.0%
CATCCTAGCAGAAAACATGA+AGG - chr2.4:6177527-6177546 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG - chr2.4:6178433-6178452 None:intergenic 40.0%
CTAGGTTGTTGCAGAAGATT+AGG + chr2.4:6176488-6176507 MS.gene31115:CDS 40.0%
GACTGAATAGAGCTCTTAGT+GGG + chr2.4:6177378-6177397 MS.gene31115:CDS 40.0%
GAGTTACGGATACCTGTTAA+AGG + chr2.4:6179809-6179828 MS.gene31115:CDS 40.0%
GGAAGCTCTCTATGTATCAA+AGG - chr2.4:6176688-6176707 None:intergenic 40.0%
GGAAGTTCAAAGGATGTCAA+AGG + chr2.4:6179872-6179891 MS.gene31115:CDS 40.0%
GGAGTATGCACATCCATATT+TGG + chr2.4:6177563-6177582 MS.gene31115:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG + chr2.4:6176333-6176352 MS.gene31115:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG + chr2.4:6176360-6176379 MS.gene31115:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG + chr2.4:6179983-6180002 MS.gene31115:CDS 40.0%
GTTGCAGAAGATTAGGGATA+AGG + chr2.4:6176495-6176514 MS.gene31115:CDS 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG + chr2.4:6176592-6176611 MS.gene31115:CDS 40.0%
TAAACCGTGTCAGAGTTAGT+TGG - chr2.4:6179503-6179522 None:intergenic 40.0%
TACACATGCATGCCTTTAAC+AGG - chr2.4:6179824-6179843 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG + chr2.4:6179901-6179920 MS.gene31115:CDS 40.0%
TACCAAAGAGGTTGTTTGTG+AGG + chr2.4:6176582-6176601 MS.gene31115:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG + chr2.4:6179977-6179996 MS.gene31115:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG + chr2.4:6179651-6179670 MS.gene31115:CDS 40.0%
TGAATACTGGACTCAGCTTT+CGG - chr2.4:6177641-6177660 None:intergenic 40.0%
TGATATGACTGAGAAGGAGA+GGG + chr2.4:6176339-6176358 MS.gene31115:CDS 40.0%
TGGAGATTATGGGTATGATG+AGG + chr2.4:6176446-6176465 MS.gene31115:CDS 40.0%
TGGGTATGATGAGGAAAGAA+AGG + chr2.4:6176455-6176474 MS.gene31115:CDS 40.0%
TTAGGGATAAGGTTCAGAAG+TGG + chr2.4:6176506-6176525 MS.gene31115:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG - chr2.4:6179901-6179920 None:intergenic 40.0%
TTCTGTAAGGGGTTACAACA+TGG + chr2.4:6179650-6179669 MS.gene31115:CDS 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG + chr2.4:6179331-6179350 MS.gene31115:intron 40.0%
TTTGCCGAATACCGTTCATT+TGG + chr2.4:6176426-6176445 MS.gene31115:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG + chr2.4:6178034-6178053 MS.gene31115:CDS 40.0%
! AACAAACCCGTTTTCCTCTA+CGG + chr2.4:6175785-6175804 MS.gene31115:CDS 40.0%
! ACTGAATGGAGTATTATCCC+TGG + chr2.4:6177173-6177192 MS.gene31115:CDS 40.0%
! ATATCTATGTTTTCCAGGGC+CGG + chr2.4:6179052-6179071 MS.gene31115:intron 40.0%
! CAGAAGTACAATACCAGAGT+TGG - chr2.4:6177212-6177231 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG - chr2.4:6177405-6177424 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG + chr2.4:6179824-6179843 MS.gene31115:CDS 40.0%
! GTTTATCCAGTTGATGTCTG+TGG + chr2.4:6179518-6179537 MS.gene31115:CDS 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG + chr2.4:6179330-6179349 MS.gene31115:intron 40.0%
!! AATGGTCAAAGAGTACTACC+TGG + chr2.4:6177911-6177930 MS.gene31115:CDS 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG + chr2.4:6176249-6176268 MS.gene31115:CDS 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG - chr2.4:6178364-6178383 None:intergenic 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG + chr2.4:6179840-6179859 MS.gene31115:CDS 40.0%
AAGCTGAGTCCAGTATTCAC+TGG + chr2.4:6177642-6177661 MS.gene31115:CDS 45.0%
ACAAATGCCGATGGAACTGT+TGG + chr2.4:6176214-6176233 MS.gene31115:CDS 45.0%
ACATAGAGAGCTTCCCAAAG+AGG + chr2.4:6176693-6176712 MS.gene31115:CDS 45.0%
ACATGAAGAGTTCGGTTTCG+TGG - chr2.4:6177603-6177622 None:intergenic 45.0%
AGCTGAGTCCAGTATTCACT+GGG + chr2.4:6177643-6177662 MS.gene31115:CDS 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG + chr2.4:6178607-6178626 MS.gene31115:intron 45.0%
ATTGGATTAACAGCTGCGTC+CGG + chr2.4:6176983-6177002 MS.gene31115:intron 45.0%
CGATGGAACTGTTGGAATCA+CGG + chr2.4:6176222-6176241 MS.gene31115:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG - chr2.4:6176224-6176243 None:intergenic 45.0%
CTCGTTCCATCCAACAACTT+CGG + chr2.4:6175608-6175627 MS.gene31115:CDS 45.0%
CTGATATGACTGAGAAGGAG+AGG + chr2.4:6176338-6176357 MS.gene31115:CDS 45.0%
GAGATAACAACTCGTGACGA+AGG + chr2.4:6177872-6177891 MS.gene31115:CDS 45.0%
GCGATTGAAGAATGGGAACT+GGG - chr2.4:6179478-6179497 None:intergenic 45.0%
GGAACCCTACAGAAGTCTAT+AGG + chr2.4:6179894-6179913 MS.gene31115:CDS 45.0%
GGACTGAATAGAGCTCTTAG+TGG + chr2.4:6177377-6177396 MS.gene31115:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG + chr2.4:6179660-6179679 MS.gene31115:CDS 45.0%
GTAGTAGAGGGAACAGGTTA+AGG + chr2.4:6178613-6178632 MS.gene31115:intron 45.0%
GTATAAGAGGAGGATGGAGA+AGG + chr2.4:6176390-6176409 MS.gene31115:CDS 45.0%
TACGGCTGCTAAATGCTTCA+GGG + chr2.4:6178752-6178771 MS.gene31115:intron 45.0%
TCCAACTTGCACTACCTTTG+AGG + chr2.4:6179024-6179043 MS.gene31115:intron 45.0%
TCCTCAAAGGTAGTGCAAGT+TGG - chr2.4:6179028-6179047 None:intergenic 45.0%
TGCAAACTGCAGGTAGATCA+AGG + chr2.4:6179438-6179457 MS.gene31115:intron 45.0%
TGGAGCGAGAAATATGTTCC+AGG + chr2.4:6178054-6178073 MS.gene31115:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG + chr2.4:6179638-6179657 MS.gene31115:CDS 45.0%
TTACGGCTGCTAAATGCTTC+AGG + chr2.4:6178751-6178770 MS.gene31115:intron 45.0%
TTGATGCATTGAGGGAGAGA+GGG - chr2.4:6175674-6175693 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG - chr2.4:6175771-6175790 None:intergenic 45.0%
! AACTCAATCGGCTTTGTCTG+CGG - chr2.4:6176313-6176332 None:intergenic 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG - chr2.4:6178751-6178770 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG - chr2.4:6175682-6175701 None:intergenic 45.0%
! GGATGAAGTGCCACCAATAT+GGG + chr2.4:6177677-6177696 MS.gene31115:CDS 45.0%
! TATCCAGTTGATGTCTGTGG+AGG + chr2.4:6179521-6179540 MS.gene31115:CDS 45.0%
! TGAGAGCAGTTGATGCATTG+AGG - chr2.4:6175683-6175702 None:intergenic 45.0%
! TGGATGAAGTGCCACCAATA+TGG + chr2.4:6177676-6177695 MS.gene31115:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG + chr2.4:6179637-6179656 MS.gene31115:CDS 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG - chr2.4:6175777-6175796 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG - chr2.4:6179486-6179505 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG - chr2.4:6175781-6175800 None:intergenic 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG + chr2.4:6179839-6179858 MS.gene31115:CDS 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG - chr2.4:6179485-6179504 None:intergenic 45.0%
!! TGGTACTGGCATTGATCACA+TGG + chr2.4:6177973-6177992 MS.gene31115:CDS 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG + chr2.4:6177356-6177375 MS.gene31115:CDS 45.0%
AAGGCCTGATGAGACTAGTG+AGG + chr2.4:6177091-6177110 MS.gene31115:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG - chr2.4:6179500-6179519 None:intergenic 50.0%
ACGGCTGCTAAATGCTTCAG+GGG + chr2.4:6178753-6178772 MS.gene31115:intron 50.0%
AGGCCTGATGAGACTAGTGA+GGG + chr2.4:6177092-6177111 MS.gene31115:CDS 50.0%
AGGGTATGCTTGTGCTTCAG+TGG + chr2.4:6176540-6176559 MS.gene31115:CDS 50.0%
AGTATTATCCCTGGACGTGG+AGG + chr2.4:6177182-6177201 MS.gene31115:CDS 50.0%
CACAGCTTGCAGCTGAGTTA+CGG + chr2.4:6179795-6179814 MS.gene31115:intron 50.0%
CAGCAACTTCTTCAACCCTC+AGG + chr2.4:6177412-6177431 MS.gene31115:CDS 50.0%
CGCAGCTATTCGCACCATTA+CGG + chr2.4:6178734-6178753 MS.gene31115:intron 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG - chr2.4:6177414-6177433 None:intergenic 50.0%
CTGAGTCCAGTATTCACTGG+GGG + chr2.4:6177645-6177664 MS.gene31115:CDS 50.0%
CTGTGGCGTGAAATTCTGCT+TGG - chr2.4:6177822-6177841 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG - chr2.4:6179527-6179546 None:intergenic 50.0%
GAAGGGAAGACAAATGCCGA+TGG + chr2.4:6176205-6176224 MS.gene31115:CDS 50.0%
GCAGACAAAGCCGATTGAGT+TGG + chr2.4:6176312-6176331 MS.gene31115:CDS 50.0%
GCAGAGCATGGGAATGATCT+AGG + chr2.4:6179851-6179870 MS.gene31115:CDS 50.0%
GCCACCAACTAACTCTGACA+CGG + chr2.4:6179496-6179515 MS.gene31115:CDS 50.0%
GCTGAGTCCAGTATTCACTG+GGG + chr2.4:6177644-6177663 MS.gene31115:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG - chr2.4:6179479-6179498 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG + chr2.4:6176141-6176160 MS.gene31115:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG + chr2.4:6179639-6179658 MS.gene31115:CDS 50.0%
GTAGATCAAGGCCTAGGCAT+TGG + chr2.4:6179450-6179469 MS.gene31115:CDS 50.0%
GTATTATCCCTGGACGTGGA+GGG + chr2.4:6177183-6177202 MS.gene31115:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG + chr2.4:6179908-6179927 MS.gene31115:CDS 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG - chr2.4:6175794-6175813 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG + chr2.4:6175611-6175630 MS.gene31115:CDS 50.0%
GTTGATGCATTGAGGGAGAG+AGG - chr2.4:6175675-6175694 None:intergenic 50.0%
TCATCAGCAATAGCTGCTGC+CGG - chr2.4:6175929-6175948 None:intergenic 50.0%
TCCTACCTCCAGCATGTTTC+TGG - chr2.4:6179691-6179710 None:intergenic 50.0%
TCTGCACTAATTCCACCACC+AGG - chr2.4:6177932-6177951 None:intergenic 50.0%
TGCTCTGACCAAACCAAGCT+TGG - chr2.4:6179954-6179973 None:intergenic 50.0%
TTGGATTAACAGCTGCGTCC+GGG + chr2.4:6176984-6177003 MS.gene31115:intron 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG + chr2.4:6176380-6176399 MS.gene31115:CDS 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG - chr2.4:6177330-6177349 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG + chr2.4:6179525-6179544 MS.gene31115:CDS 50.0%
! CGGCTGATGTCAGTACTGAA+TGG + chr2.4:6177159-6177178 MS.gene31115:CDS 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG + chr2.4:6176384-6176403 MS.gene31115:CDS 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG - chr2.4:6175795-6175814 None:intergenic 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG + chr2.4:6176377-6176396 MS.gene31115:CDS 50.0%
! TCACTAGTCTCATCAGGCCT+TGG - chr2.4:6177092-6177111 None:intergenic 50.0%
! TGACGGATGAGATAGTCACC+TGG - chr2.4:6178075-6178094 None:intergenic 50.0%
! TGGAGTATTATCCCTGGACG+TGG + chr2.4:6177179-6177198 MS.gene31115:CDS 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG + chr2.4:6175869-6175888 MS.gene31115:CDS 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG - chr2.4:6177430-6177449 None:intergenic 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG + chr2.4:6177917-6177936 MS.gene31115:CDS 50.0%
!! CATGGTGGTGGTGGAAGTAA+TGG + chr2.4:6175827-6175846 MS.gene31115:CDS 50.0%
!! CCACCAATATGGGTTGATCG+CGG + chr2.4:6177687-6177706 MS.gene31115:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG + chr2.4:6175894-6175913 MS.gene31115:CDS 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG + chr2.4:6177914-6177933 MS.gene31115:CDS 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG + chr2.4:6177932-6177951 MS.gene31115:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG + chr2.4:6179938-6179957 MS.gene31115:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG + chr2.4:6179943-6179962 MS.gene31115:CDS 50.0%
!!! GTTGTTGTTTTTGCGACGGC+CGG - chr2.4:6175648-6175667 None:intergenic 50.0%
AGAGGAGGATGGAGAAGGCT+AGG + chr2.4:6176395-6176414 MS.gene31115:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG + chr2.4:6175842-6175861 MS.gene31115:CDS 55.0%
ATGGAGGACAAGAACTGGCG+GGG - chr2.4:6179565-6179584 None:intergenic 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG + chr2.4:6179531-6179550 MS.gene31115:CDS 55.0%
CATGGAGGACAAGAACTGGC+GGG - chr2.4:6179566-6179585 None:intergenic 55.0%
CCACCGCGATCAACCCATAT+TGG - chr2.4:6177693-6177712 None:intergenic 55.0%
CCATGGAGGACAAGAACTGG+CGG - chr2.4:6179567-6179586 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG - chr2.4:6177690-6177709 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG + chr2.4:6177095-6177114 MS.gene31115:CDS 55.0%
CGGCTGCTAAATGCTTCAGG+GGG + chr2.4:6178754-6178773 MS.gene31115:intron 55.0%
CGGTGAGGGGTTTGAAGACA+CGG - chr2.4:6175721-6175740 None:intergenic 55.0%
CGTAACTCAGCTGCAAGCTG+TGG - chr2.4:6179797-6179816 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG + chr2.4:6179444-6179463 MS.gene31115:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG - chr2.4:6179094-6179113 None:intergenic 55.0%
GATCAATGCCAGTACCACCG+AGG - chr2.4:6177970-6177989 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr2.4:6179087-6179106 MS.gene31115:intron 55.0%
GCCAGAAACATGCTGGAGGT+AGG + chr2.4:6179687-6179706 MS.gene31115:intron 55.0%
GGAAGTAATGGTGGCAGTGG+TGG + chr2.4:6175839-6175858 MS.gene31115:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG + chr2.4:6175836-6175855 MS.gene31115:CDS 55.0%
GTTCAGGCCTCACTTCAACC+TGG + chr2.4:6177320-6177339 MS.gene31115:intron 55.0%
TCCGGGCGGAGTTTACACAA+GGG + chr2.4:6176120-6176139 MS.gene31115:CDS 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG - chr2.4:6179095-6179114 None:intergenic 55.0%
TGAGGGGTTTGAAGACACGG+CGG - chr2.4:6175718-6175737 None:intergenic 55.0%
TGCTGCCAGAAACATGCTGG+AGG + chr2.4:6179683-6179702 MS.gene31115:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG + chr2.4:6176119-6176138 MS.gene31115:CDS 55.0%
TTCCTCTACGGCAACACCAC+TGG + chr2.4:6175797-6175816 MS.gene31115:CDS 55.0%
TTGGATACCCTCCACGTCCA+GGG - chr2.4:6177193-6177212 None:intergenic 55.0%
TTTGGAGGAGGAAACGGAGG+AGG + chr2.4:6175875-6175894 MS.gene31115:CDS 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG - chr2.4:6179086-6179105 None:intergenic 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG + chr2.4:6175888-6175907 MS.gene31115:CDS 55.0%
! CACAAGGGCGCAACTACAGA+AGG + chr2.4:6176135-6176154 MS.gene31115:CDS 55.0%
! CCTCCCTCACTAGTCTCATC+AGG - chr2.4:6177098-6177117 None:intergenic 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG + chr2.4:6175872-6175891 MS.gene31115:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG + chr2.4:6175809-6175828 MS.gene31115:CDS 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG + chr2.4:6177196-6177215 MS.gene31115:CDS 55.0%
!! CCAATATGGGTTGATCGCGG+TGG + chr2.4:6177690-6177709 MS.gene31115:CDS 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG - chr2.4:6177431-6177450 None:intergenic 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG + chr2.4:6175830-6175849 MS.gene31115:CDS 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG + chr2.4:6179680-6179699 MS.gene31115:CDS 55.0%
AATGCCAGTACCACCGAGGC+TGG - chr2.4:6177966-6177985 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG - chr2.4:6175753-6175772 None:intergenic 60.0%
ACCACCATGTCCACCACCAG+TGG - chr2.4:6175816-6175835 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG - chr2.4:6175765-6175784 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr2.4:6179079-6179098 MS.gene31115:intron 60.0%
CAGGCCTCACTTCAACCTGG+TGG + chr2.4:6177323-6177342 MS.gene31115:intron 60.0%
CCGCCAGTTCTTGTCCTCCA+TGG + chr2.4:6179564-6179583 MS.gene31115:CDS 60.0%
CGGCCATGGAGGACAAGAAC+TGG - chr2.4:6179570-6179589 None:intergenic 60.0%
CTCTACGGCAACACCACTGG+TGG + chr2.4:6175800-6175819 MS.gene31115:CDS 60.0%
CTTGTCCTCCATGGCCGCTA+TGG + chr2.4:6179573-6179592 MS.gene31115:CDS 60.0%
GATGGACCTCCTACCAGCCT+CGG + chr2.4:6177950-6177969 MS.gene31115:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG - chr2.4:6176124-6176143 None:intergenic 60.0%
GGAACTGGGTGCCAATGCCT+AGG - chr2.4:6179464-6179483 None:intergenic 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr2.4:6179080-6179099 MS.gene31115:intron 60.0%
GTGCCGCCGAAGTTGTTGGA+TGG - chr2.4:6175617-6175636 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG - chr2.4:6177194-6177213 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG - chr2.4:6175712-6175731 None:intergenic 60.0%
TACGGCAACACCACTGGTGG+TGG + chr2.4:6175803-6175822 MS.gene31115:CDS 60.0%
TGGAGGACAAGAACTGGCGG+GGG - chr2.4:6179564-6179583 None:intergenic 60.0%
TGGTGGCACTTCATCCAGCC+CGG - chr2.4:6177673-6177692 None:intergenic 60.0%
TTCGGCGGCACCATCTTGTC+CGG + chr2.4:6175626-6175645 MS.gene31115:CDS 60.0%
TTTGAAGACACGGCGGCGAC+GGG - chr2.4:6175711-6175730 None:intergenic 60.0%
TTTGCGACGGCCGGACAAGA+TGG - chr2.4:6175639-6175658 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG + chr2.4:6178667-6178686 MS.gene31115:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr2.4:6179078-6179097 None:intergenic 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG + chr2.4:6179060-6179079 MS.gene31115:intron 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG + chr2.4:6179059-6179078 MS.gene31115:intron 60.0%
!! AATGGTGGCAGTGGTGGTGG+AGG + chr2.4:6175845-6175864 MS.gene31115:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG + chr2.4:6175812-6175831 MS.gene31115:CDS 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG + chr2.4:6175815-6175834 MS.gene31115:CDS 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG - chr2.4:6175802-6175821 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG - chr2.4:6175621-6175640 None:intergenic 60.0%
!! GGAGGTTGGTGGTTTGGAGG+AGG + chr2.4:6175863-6175882 MS.gene31115:CDS 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG + chr2.4:6179335-6179354 MS.gene31115:intron 60.0%
!! GGTGGAGGTTGGTGGTTTGG+AGG + chr2.4:6175860-6175879 MS.gene31115:CDS 60.0%
!! GGTGGTGGAGGTTGGTGGTT+TGG + chr2.4:6175857-6175876 MS.gene31115:CDS 60.0%
AGGACAAGAACTGGCGGGGG+TGG - chr2.4:6179561-6179580 None:intergenic 65.0%
CAGTATTCACTGGGGGCCCC+GGG + chr2.4:6177652-6177671 MS.gene31115:CDS 65.0%
CCAGTACCACCGAGGCTGGT+AGG - chr2.4:6177962-6177981 None:intergenic 65.0%
CCAGTATTCACTGGGGGCCC+CGG + chr2.4:6177651-6177670 MS.gene31115:CDS 65.0%
CCTACCAGCCTCGGTGGTAC+TGG + chr2.4:6177959-6177978 MS.gene31115:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG + chr2.4:6175881-6175900 MS.gene31115:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG + chr2.4:6175878-6175897 MS.gene31115:CDS 65.0%
GGCCGGCCCTAGAGACTAAG+AGG - chr2.4:6179340-6179359 None:intergenic 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr2.4:6179074-6179093 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG - chr2.4:6177672-6177691 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG - chr2.4:6177959-6177978 None:intergenic 65.0%
GTGGCACTTCATCCAGCCCG+GGG - chr2.4:6177671-6177690 None:intergenic 65.0%
!! GCAGTGGTGGTGGAGGTTGG+TGG + chr2.4:6175852-6175871 MS.gene31115:CDS 65.0%
!! GGTGGTGGACATGGTGGTGG+TGG + chr2.4:6175818-6175837 MS.gene31115:CDS 65.0%
!! GTGGCAGTGGTGGTGGAGGT+TGG + chr2.4:6175849-6175868 MS.gene31115:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG - chr2.4:6175707-6175726 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG - chr2.4:6175747-6175766 None:intergenic 70.0%
CCGGGGCCCCCAGTGAATAC+TGG - chr2.4:6177654-6177673 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG + chr2.4:6177953-6177972 MS.gene31115:CDS 70.0%
GGAGGAAACGGCGACGGTGG+CGG - chr2.4:6175741-6175760 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG - chr2.4:6175762-6175781 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG - chr2.4:6175736-6175755 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG - chr2.4:6175735-6175754 None:intergenic 70.0%
ATTCACTGGGGGCCCCGGGC+TGG + chr2.4:6177656-6177675 MS.gene31115:CDS 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG - chr2.4:6179068-6179087 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG - chr2.4:6175759-6175778 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG - chr2.4:6175744-6175763 None:intergenic 75.0%
! ACGGCGACGGTGGCGGTGAG+GGG - chr2.4:6175734-6175753 None:intergenic 75.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 6175599 6180039 6175599 ID=MS.gene31115
chr2.4 mRNA 6175599 6180039 6175599 ID=MS.gene31115.t1;Parent=MS.gene31115
chr2.4 exon 6175599 6176714 6175599 ID=MS.gene31115.t1.exon1;Parent=MS.gene31115.t1
chr2.4 CDS 6175599 6176714 6175599 ID=cds.MS.gene31115.t1;Parent=MS.gene31115.t1
chr2.4 exon 6176996 6177217 6176996 ID=MS.gene31115.t1.exon2;Parent=MS.gene31115.t1
chr2.4 CDS 6176996 6177217 6176996 ID=cds.MS.gene31115.t1;Parent=MS.gene31115.t1
chr2.4 exon 6177326 6177433 6177326 ID=MS.gene31115.t1.exon3;Parent=MS.gene31115.t1
chr2.4 CDS 6177326 6177433 6177326 ID=cds.MS.gene31115.t1;Parent=MS.gene31115.t1
chr2.4 exon 6177543 6177734 6177543 ID=MS.gene31115.t1.exon4;Parent=MS.gene31115.t1
chr2.4 CDS 6177543 6177734 6177543 ID=cds.MS.gene31115.t1;Parent=MS.gene31115.t1
chr2.4 exon 6177827 6178075 6177827 ID=MS.gene31115.t1.exon5;Parent=MS.gene31115.t1
chr2.4 CDS 6177827 6178075 6177827 ID=cds.MS.gene31115.t1;Parent=MS.gene31115.t1
chr2.4 exon 6179450 6179704 6179450 ID=MS.gene31115.t1.exon6;Parent=MS.gene31115.t1
chr2.4 CDS 6179450 6179704 6179450 ID=cds.MS.gene31115.t1;Parent=MS.gene31115.t1
chr2.4 exon 6179800 6180039 6179800 ID=MS.gene31115.t1.exon7;Parent=MS.gene31115.t1
chr2.4 CDS 6179800 6180039 6179800 ID=cds.MS.gene31115.t1;Parent=MS.gene31115.t1
Gene Sequence

>MS.gene31115

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTGTCCGGCCGTCGCAAAAACAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGAGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACAAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAAAGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTTTGATACATAGAGAGCTTCCCAAAGAGGTATAATATAATATTATACACTTTGTAGTTATGTAATATGTTATGTTGTTATCTGTTATATATATGGGAGGTTCATAGGCTTCTTATTGTTGTCGATTTTTGTTATCTGCTGAATAATTGATATTTCTAGTATGGTTAGTTGCTGCCAATTTCAATGATTATTTGCCTGTTTAGGATATCGGGTTGTTTTGTTATTATGTTTTGTGATTTGTTTTTTATATCCTAAAACTGCTCATTGGTTTTAGTTACTCACTTGATGGATGTTTGTATTGGATTAACAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGTATTGTACTTCTGTCAAATTAAACATCAATTTTCTACAACCACCAAGGGATTTTTTTTTTTTTTTCTGCTCGATTAATCTGATTGATTGCTTTTCAATTTTGTTCAGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGGTCCATAACAACCAGCAACTTCTTCAACCCTCAGGTACTCTTGAGCCAGTCTGCTGAGATTCTTCATTTTATTCTGAAAATAGTTTTTTGTTTTATCAATATTGATACTGGTATCACAAAATTTCCTTCATGTTTTCTGCTAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATGTAAGCTGTTTCAATAGCCGAAAGCTGAGTCCAGTATTCACTGGGGGCCCCGGGCTGGATGAAGTGCCACCAATATGGGTTGATCGCGGTGGTGTCAAAGCTAATATTACAGAGGCAAGTTACTTGTTTTTCTTTATTTTTACATGAACTATTTAGGCTAATGGTAGTGATTTTTTATCTTCATATTCATGTTGTGTGCCAAGCAGAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTGACTATCTCATCCGTCACTAACTGTCTTTAAAGTTGCATACATGGATGCTTTAAGCCTTTTTATTATTTGCTTACATGGATGCTTTAAGCCTTTTTATTATCTTTAAGCCTTTTTCCTCTTATAATTGTATTGGTAAACCTATCTTGTTTTATGTGACTACTCATCATAAAATTCTCATCTTTGTGATACTGAAATTACTTGTTTGTTAATTCTTTGCTGCCAATATTCAGTCTTATATATCCTTGTATATTTTCTAATTGTGTGCTAAATTTTTCCTTTTAACCTGAGTGATACTTTTCTCTAGCTGATTATGCCCTAAATGTTCTTTCATTTCAATCATCCTATTTAGATCCTATGGTTAACATTTTCCTCCGTTGATGGACTATTTTTTTCTTGATTGTTGACTATGTATAATATTAAATTTTTTAACTGTAATATTCTTTTGTGTTAGCTGAGCTCTCAAGAAAACTTGTCTAGTTGTATCCTTTGGATCAATATAAAAGTTGGCATGTAAACCTATCTACAAAGATAGGAGTAGTAGAGGGAACAGGTTAAGGATATAATCTATGTAGTCTATAGTGTGCTATAGCGGCGTGTAGAGTGTTCAGTGGCTTCTATAGAAAGTAGCAGAGCCTTTTGCTGTAATGATCAAAATCGCAGCTATTCGCACCATTACGGCTGCTAAATGCTTCAGGGGGATTTTTTTGCTTTTCTTGAATTTTAATATTTAGTTACTGTAAGCTTTAGACAATTAGTTTTTATTTTTTATTTTTACTTTTTTGTATTTTCTTCTATCTTTGATTTCAGACCTATTACTTTTGTTAGAATTTATGAATATTTCATGAATTTTATGTATCCTTTTCCATTATATGATGTCGGCTACTTGGATAAATCAATGCCATTGAGCTCTAACTACACATTTTCAGTGAACACTTCAATTCATGGTCCAACTTGCACTACCTTTGAGGACAAGATATCTATGTTTTCCAGGGCCGGCCTAAGGGCCAAGCAACCCAAGCAAGGGCTTTAGGCCTCAAAATTATGTGTGAAAAAAAGGCCTCTAAAAAATTAATTTGGTTATAAGTATATTATGTGATAGATAAATTACAGACATTTGCATAACATAATTGATTACTAAAAAGGCTTCAATTACTCTTGGTCATGAATTCAAATTTTGATCTCCACAAAATTGATTTTATATAAATATTTTGTTTAAAAAATATATTTTTAAAGGCCACATTAAAAAATTTGTTTTAGGCCTCTTAGTCTCTAGGGCCGGCCCTGATGTTTTCTATTTAAGACTCTTGAAGTATGCGATAGACCTGTGACAATGCTTTCTGATTATACAGTTTTTATATATGCAAACTGCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGGTAGGAATTACTAGCCTCGTTTTATGATTCTTTATCAAGATTTTATTGTAGTTAACTTTTATTATCTGTTTACTAATTTCTTTTTCATTCCACAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA
Protein sequence

>MS.gene31115.t1

MSSLVPSNNFGGTILSGRRKNNNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGSNGGSGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTKEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPLIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHVSCFNSRKLSPVFTGGPGLDEVPPIWVDRGGVKANITENFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF