AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31141

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31141.t1 MTR_2g097020 90.722 679 44 5 1 672 1 667 0.0 1206
MS.gene31141.t1 MTR_4g046643 80.909 660 114 4 1 655 1 653 0.0 1032
MS.gene31141.t1 MTR_2g097010 80.973 678 123 1 1 672 1 678 0.0 1028
MS.gene31141.t1 MTR_2g095400 79.941 678 89 5 1 672 1 637 0.0 1023
MS.gene31141.t1 MTR_2g097000 74.872 390 80 3 299 672 2 389 0.0 534
MS.gene31141.t1 MTR_3g067815 39.851 670 345 12 10 667 13 636 3.67e-156 465
MS.gene31141.t1 MTR_5g079940 38.346 665 360 17 21 671 492 1120 1.74e-136 428
MS.gene31141.t1 MTR_4g126200 73.764 263 53 3 414 672 3 253 2.05e-128 380
MS.gene31141.t1 MTR_4g131350 36.921 669 351 16 16 671 72 682 2.61e-118 369
MS.gene31141.t1 MTR_4g006760 35.952 662 350 15 21 668 24 625 2.66e-118 367
MS.gene31141.t1 MTR_4g125920 36.622 669 353 16 16 671 19 629 1.82e-117 365
MS.gene31141.t1 MTR_4g126180 77.391 115 26 0 300 414 3 117 4.51e-50 170
MS.gene31141.t1 MTR_3g067855 43.182 220 109 4 441 659 123 327 1.27e-45 166
MS.gene31141.t1 MTR_8g446460 56.618 136 50 3 9 138 107 239 5.76e-37 141
MS.gene31141.t1 MTR_3g067845 35.075 268 155 5 406 671 1 251 2.24e-34 132
MS.gene31141.t1 MTR_4g131310 26.115 471 249 14 16 471 19 405 7.00e-31 126
MS.gene31141.t1 MTR_4g131310 59.375 64 26 0 597 660 391 454 1.02e-17 87.0
MS.gene31141.t1 MTR_2g066850 65.882 85 24 3 2 84 66 147 6.94e-25 111
MS.gene31141.t1 MTR_2g075630 74.242 66 14 2 2 67 67 129 3.59e-24 102
MS.gene31141.t1 MTR_8g063010 61.905 63 21 2 18 80 57 116 3.20e-18 84.0
MS.gene31141.t1 MTR_3g067825 44.444 90 45 2 575 659 3 92 2.87e-16 75.9
MS.gene31141.t1 MTR_5g044360 60.000 50 18 2 25 74 76 123 3.05e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31141.t1 AT1G13790 46.881 529 259 7 139 663 216 726 4.63e-142 432
MS.gene31141.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.29e-11 66.6
MS.gene31141.t1 AT1G13790 46.881 529 259 7 139 663 216 726 4.63e-142 432
MS.gene31141.t1 AT1G13790 50.633 79 31 4 12 87 9 82 5.29e-11 66.6
MS.gene31141.t1 AT3G12550 36.090 665 371 13 13 663 5 629 2.62e-118 367
MS.gene31141.t1 AT3G48670 35.312 674 372 14 13 671 21 645 1.38e-117 366
MS.gene31141.t1 AT3G48670 35.312 674 372 14 13 671 21 645 1.38e-117 366
MS.gene31141.t1 AT3G48670 35.312 674 372 14 13 671 21 645 1.38e-117 366
MS.gene31141.t1 AT3G12550 36.036 666 371 14 13 663 5 630 1.15e-116 363
MS.gene31141.t1 AT3G12550 36.036 666 371 14 13 663 5 630 1.15e-116 363
MS.gene31141.t1 AT3G12550 36.036 666 371 14 13 663 5 630 1.15e-116 363
MS.gene31141.t1 AT1G15910 34.412 680 359 16 16 671 18 634 3.82e-110 346
MS.gene31141.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.19e-105 332
MS.gene31141.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.19e-105 332
MS.gene31141.t1 AT5G59390 36.920 539 306 9 133 661 25 539 1.19e-105 332
MS.gene31141.t1 AT4G00380 33.333 669 359 15 15 659 18 623 6.24e-104 330
MS.gene31141.t1 AT4G00380 33.333 669 359 15 15 659 18 623 6.24e-104 330
MS.gene31141.t1 AT5G59390 36.581 544 306 10 133 661 25 544 2.39e-103 326
MS.gene31141.t1 AT5G59390 36.581 544 306 10 133 661 25 544 2.39e-103 326
MS.gene31141.t1 AT1G80790 35.303 677 357 16 15 671 19 634 3.13e-102 325
MS.gene31141.t1 AT1G80790 35.303 677 357 16 15 671 19 634 3.13e-102 325
MS.gene31141.t1 AT4G00380 36.481 540 288 10 141 659 90 595 3.14e-101 322
MS.gene31141.t1 AT4G01180 36.147 545 296 10 137 661 27 539 2.25e-97 310
MS.gene31141.t1 AT3G12550 33.447 586 336 13 16 587 8 553 3.80e-85 279
MS.gene31141.t1 AT4G01780 32.043 465 209 10 209 671 111 470 1.13e-58 205
MS.gene31141.t1 AT1G80790 30.819 464 254 13 15 458 19 435 6.18e-55 195
MS.gene31141.t1 AT3G29375 42.857 210 98 5 462 670 38 226 8.03e-42 152
MS.gene31141.t1 AT3G29375 42.857 210 98 5 462 670 161 349 1.21e-39 149
MS.gene31141.t1 AT3G29375 38.095 126 59 3 462 587 38 144 5.51e-15 73.9
MS.gene31141.t1 AT2G16490 40.000 65 39 0 596 660 74 138 6.78e-12 65.1

Find 157 sgRNAs with CRISPR-Local

Find 250 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTTCCATTGTTTAATTAAA+TGG 0.065652 2.4:+6450625 None:intergenic
TTCCTCAGTCTTCAGCTTTA+AGG 0.090360 2.4:+6453280 None:intergenic
GGGGACTTGAAAACTGTTTC+TGG 0.148020 2.4:-6453359 MS.gene31141:CDS
GAGGGATTACTTGGCTTTAC+AGG 0.200357 2.4:-6453474 MS.gene31141:CDS
ATGACTCGAGCAGTGTTCTT+TGG 0.279903 2.4:+6451318 None:intergenic
GATGCTTGAACATTTCAATA+AGG 0.283852 2.4:-6453186 MS.gene31141:CDS
TATAGTTGGCAAACACCTTC+AGG 0.289693 2.4:-6453387 MS.gene31141:CDS
GGAAAAGGAAGAGGAATTAG+AGG 0.297864 2.4:-6452132 MS.gene31141:CDS
CCCTTTGCAGTTGTTCAGTT+TGG 0.303743 2.4:-6453566 MS.gene31141:CDS
GGCAAACACCTTCAGGGAAA+TGG 0.327163 2.4:-6453380 MS.gene31141:CDS
GAGCGGGGAGATAGACTCTT+TGG 0.328386 2.4:-6453446 MS.gene31141:CDS
CCTTGTAGTAATCATCCTTC+AGG 0.329123 2.4:+6454086 None:intergenic
AAGGCTGAAAGGAGCTTTCC+AGG 0.329972 2.4:-6452225 MS.gene31141:CDS
TCAACAAACTCTGGTTGTTC+AGG 0.333719 2.4:-6452096 MS.gene31141:CDS
CTTCCATTGTTTAATTAAAT+GGG 0.340209 2.4:+6450626 None:intergenic
AGTCTTCAGCTTTAAGGTAT+TGG 0.341440 2.4:+6453286 None:intergenic
AATTCCAGAGTTCTGGTATT+GGG 0.344766 2.4:+6450688 None:intergenic
TGCTAAACAGGCATTGGAAT+TGG 0.345449 2.4:-6452255 MS.gene31141:CDS
TTTGATCCATCGCTTTCCTT+AGG 0.347229 2.4:+6453216 None:intergenic
TCTCTAAAATTCCAGAGTTC+TGG 0.347547 2.4:+6450681 None:intergenic
AAAATTGGAGGAAATCAAAA+TGG 0.350809 2.4:-6452162 MS.gene31141:CDS
ACTGCCCTTTGGAACTTTAG+AGG 0.353454 2.4:-6453596 MS.gene31141:CDS
GAATGATGCTGAGGGTCATT+TGG 0.358140 2.4:-6453783 MS.gene31141:CDS
ACCTGAGTCACCCACAATTC+TGG 0.361313 2.4:+6453973 None:intergenic
AAAGCTGAAGACTGAGGAAT+TGG 0.361410 2.4:-6453276 MS.gene31141:CDS
ATGCTTGAACATTTCAATAA+GGG 0.377132 2.4:-6453185 MS.gene31141:intron
GCAAACACCTTCAGGGAAAT+GGG 0.378780 2.4:-6453379 MS.gene31141:CDS
CATTGAAAGTTACTGCCCTT+TGG 0.383307 2.4:-6453607 MS.gene31141:CDS
ACAAGCTCGTGAGTCTGATT+TGG 0.387571 2.4:-6454137 MS.gene31141:CDS
AAAGTTTGAAGGATGAGTTC+GGG 0.387895 2.4:-6450779 MS.gene31141:CDS
TGACTCGAGCAGTGTTCTTT+GGG 0.389447 2.4:+6451319 None:intergenic
CTCCAATGTGATTCATTACC+TGG 0.402190 2.4:+6452207 None:intergenic
GAGAGGACTTGATGCTAAAC+AGG 0.402921 2.4:-6452267 MS.gene31141:CDS
GGAAAGAAGCTGAGGACAAT+AGG 0.403031 2.4:-6453337 MS.gene31141:CDS
CAAAGGGCAGTAACTTTCAA+TGG 0.403403 2.4:+6453608 None:intergenic
GGAAGAGGAATTAGAGGGTG+TGG 0.409930 2.4:-6452126 MS.gene31141:CDS
TTGATCCATCGCTTTCCTTA+GGG 0.410024 2.4:+6453217 None:intergenic
CTCTTAGCTGCTTCCACGAA+TGG 0.415838 2.4:+6451258 None:intergenic
CTGTGGTAAGAGGGATTACT+TGG 0.417597 2.4:-6453483 MS.gene31141:CDS
ATGGGAAACACCTTCCTTCA+AGG 0.418880 2.4:+6450644 None:intergenic
CCGAGCTTCCAGTTCCAGCC+TGG 0.420885 2.4:+6452895 None:intergenic
GAGGAAGCTTCTCTCTGGTT+TGG 0.422362 2.4:-6453309 MS.gene31141:CDS
GGGACTTGAAAACTGTTTCT+GGG 0.423117 2.4:-6453358 MS.gene31141:CDS
TATAATTTCAAAGATATAGT+TGG 0.424336 2.4:-6453401 MS.gene31141:CDS
GGCTTTACAGGAGCAGGAGC+GGG 0.425810 2.4:-6453462 MS.gene31141:CDS
AAAAGTTTGAAGGATGAGTT+CGG 0.426423 2.4:-6450780 MS.gene31141:CDS
CAAAATGGAGCTGCAGGAAA+AGG 0.431336 2.4:-6452147 MS.gene31141:CDS
GTACCAGGAGAAAGTATCTA+AGG 0.432366 2.4:-6452930 MS.gene31141:CDS
TTACTTGGCTTTACAGGAGC+AGG 0.442838 2.4:-6453468 MS.gene31141:CDS
AAATTCCAGAGTTCTGGTAT+TGG 0.450982 2.4:+6450687 None:intergenic
GGAAATCAAAATGGAGCTGC+AGG 0.455953 2.4:-6452153 MS.gene31141:CDS
AATGATGCTGAGGGTCATTT+GGG 0.461869 2.4:-6453782 MS.gene31141:CDS
TTTCTTCTCAAAATATAGCT+TGG 0.463871 2.4:+6452805 None:intergenic
ATGATGATGAGTTGTTTGTA+TGG 0.467760 2.4:-6453745 MS.gene31141:CDS
AAGCAGAGCACTGTGGTAAG+AGG 0.475875 2.4:-6453493 MS.gene31141:CDS
TCAAGTCCCCATTTCCCTGA+AGG 0.479524 2.4:+6453372 None:intergenic
AGGAGGAGCTGATCATGAAC+GGG 0.480433 2.4:-6453637 MS.gene31141:CDS
GCAGGTTGAACGCGAGTACC+AGG 0.481691 2.4:-6452945 MS.gene31141:CDS
CCAAACTGAACAACTGCAAA+GGG 0.483115 2.4:+6453566 None:intergenic
CATAATTTCTGTGAAAAGGA+TGG 0.486804 2.4:-6451298 MS.gene31141:CDS
AGATAGACTCTTTGGGTGGA+TGG 0.488205 2.4:-6453438 MS.gene31141:CDS
AAGGAAAGCGATGGATCAAA+AGG 0.493646 2.4:-6453213 MS.gene31141:CDS
GAAGGATGAGTTCGGGGATG+AGG 0.499124 2.4:-6450772 MS.gene31141:CDS
TTTACTTGTACACAGTGGAT+TGG 0.502307 2.4:-6451345 MS.gene31141:intron
TTGTCCGTTACAACTTTGAA+CGG 0.502338 2.4:+6451111 None:intergenic
AGCGGGGAGATAGACTCTTT+GGG 0.503541 2.4:-6453445 MS.gene31141:CDS
AAAGCGAGGAAGCTTCTCTC+TGG 0.506331 2.4:-6453314 MS.gene31141:CDS
AAAGGGCAGTAACTTTCAAT+GGG 0.509326 2.4:+6453609 None:intergenic
GAGTCATAATTTCTGTGAAA+AGG 0.512368 2.4:-6451302 MS.gene31141:CDS
ACTTGATGCTAAACAGGCAT+TGG 0.514013 2.4:-6452261 MS.gene31141:CDS
ACTTGATATCAAGCCATTCG+TGG 0.514781 2.4:-6451271 MS.gene31141:CDS
ATGAGTTGTTTGTATGGCCA+TGG 0.517649 2.4:-6453739 MS.gene31141:CDS
AGGAAGGAAGGCTTCCTTGA+AGG 0.521328 2.4:-6450658 MS.gene31141:CDS
TGTTGCTAAGCATTCAGCTC+TGG 0.522198 2.4:-6453936 MS.gene31141:CDS
AAAGTTGTAACGGACAAAGA+AGG 0.523153 2.4:-6451105 MS.gene31141:CDS
CGAACTTATTTCCCGTGAGA+AGG 0.523382 2.4:-6452867 MS.gene31141:CDS
GGTATTGGGTACCTACCACT+AGG 0.523917 2.4:+6450702 None:intergenic
GGAAGATCTTCAACAAACTC+TGG 0.525747 2.4:-6452105 MS.gene31141:CDS
TAGCATCAAGTCCTCTCTCC+AGG 0.527448 2.4:+6452273 None:intergenic
CATTGGAATTGGAGATAGAA+AGG 0.527648 2.4:-6452244 MS.gene31141:CDS
TTGGATGTTGCAGAAAGAAA+AGG 0.529965 2.4:-6452321 MS.gene31141:intron
GGCATTAGAAGAGCAACAAA+AGG 0.535693 2.4:-6452459 MS.gene31141:CDS
TAATCCTTGTTGTAGCAAAA+CGG 0.536850 2.4:+6454028 None:intergenic
TCCAGAATTGTGGGTGACTC+AGG 0.538417 2.4:-6453974 MS.gene31141:CDS
TAGTATTGTTAATGATAAGT+CGG 0.539521 2.4:-6453843 MS.gene31141:CDS
GTACTTGGCAGAAGAACATA+AGG 0.541395 2.4:-6452420 MS.gene31141:intron
ATAGTTGGCAAACACCTTCA+GGG 0.546668 2.4:-6453386 MS.gene31141:CDS
CAGTTTGGAAGAGAGTGGGA+TGG 0.548016 2.4:-6453551 MS.gene31141:CDS
ACTTTGAACGGATGCCAGCT+TGG 0.548798 2.4:+6451123 None:intergenic
AAAGTGGGATGACTATGTTA+AGG 0.550233 2.4:-6451148 MS.gene31141:CDS
AGAGATCAGCAAGATGCGGC+AGG 0.552419 2.4:-6452963 MS.gene31141:CDS
TGTTCAGTTTGGAAGAGAGT+GGG 0.554707 2.4:-6453555 MS.gene31141:CDS
TGCAGTAGCTACAGCTCTGA+AGG 0.557138 2.4:-6450742 MS.gene31141:CDS
CCAGGCTGGAACTGGAAGCT+CGG 0.558629 2.4:-6452895 MS.gene31141:CDS
CCTGAAGGATGATTACTACA+AGG 0.560609 2.4:-6454086 MS.gene31141:CDS
GATCCTTAGATACTTTCTCC+TGG 0.560678 2.4:+6452927 None:intergenic
AGCAGAGCACTGTGGTAAGA+GGG 0.561293 2.4:-6453492 MS.gene31141:CDS
TCCAAACTGAACAACTGCAA+AGG 0.564795 2.4:+6453565 None:intergenic
TTGTTCAGTTTGGAAGAGAG+TGG 0.565319 2.4:-6453556 MS.gene31141:CDS
ATAATTTCTGTGAAAAGGAT+GGG 0.567235 2.4:-6451297 MS.gene31141:CDS
AAGGAGGAGCTGATCATGAA+CGG 0.571820 2.4:-6453638 MS.gene31141:CDS
TTTGTCCTCTAAAGTTCCAA+AGG 0.575959 2.4:+6453591 None:intergenic
AAGGGAAAGAAAGCTTATTG+AGG 0.581176 2.4:-6450597 None:intergenic
GGTACCCAATACCAGAACTC+TGG 0.581859 2.4:-6450692 MS.gene31141:CDS
CAATCGAGTGGTGCTCAAAG+TGG 0.583300 2.4:-6451164 MS.gene31141:CDS
TTTCCCATTTAATTAAACAA+TGG 0.583512 2.4:-6450629 MS.gene31141:CDS
GGAGCTGCAGGAAAAGGAAG+AGG 0.585994 2.4:-6452141 MS.gene31141:CDS
AATCGAGTGGTGCTCAAAGT+GGG 0.588592 2.4:-6451163 MS.gene31141:CDS
TTGTCCTCTAAAGTTCCAAA+GGG 0.590549 2.4:+6453592 None:intergenic
AAAATTCATGACCTGGAGAG+AGG 0.591924 2.4:-6452284 MS.gene31141:CDS
AAGTTGTAACGGACAAAGAA+GGG 0.592579 2.4:-6451104 MS.gene31141:CDS
TGGCTTTACAGGAGCAGGAG+CGG 0.594925 2.4:-6453463 MS.gene31141:CDS
GTATTGGGTACCTACCACTA+GGG 0.598398 2.4:+6450703 None:intergenic
GAGACATGCATCCAGAATTG+TGG 0.598602 2.4:-6453984 MS.gene31141:CDS
ATTGATAATGATAAGACCCC+TGG 0.598967 2.4:-6453869 MS.gene31141:CDS
GCAAAACGGACAGCGAAACG+TGG 0.601097 2.4:+6454042 None:intergenic
ACTTATTATGAATGATGCTG+AGG 0.601843 2.4:-6453792 MS.gene31141:CDS
TTCCAGGTAATGAATCACAT+TGG 0.602846 2.4:-6452209 MS.gene31141:CDS
TTGTTGTTTACAGAATGAGA+TGG 0.606515 2.4:-6452480 MS.gene31141:intron
TCACAAGAAAATTCATGACC+TGG 0.607531 2.4:-6452291 MS.gene31141:CDS
TCATTAACAATACTAACACC+AGG 0.607787 2.4:+6453851 None:intergenic
GCTTCTGCAGATCCTTCTCA+CGG 0.608508 2.4:+6452855 None:intergenic
AGGAAGGCTTCCTTGAAGGA+AGG 0.613280 2.4:-6450654 MS.gene31141:CDS
GCTTTACAGGAGCAGGAGCG+GGG 0.615171 2.4:-6453461 MS.gene31141:CDS
GCATCCGTTCAAAGTTGTAA+CGG 0.615867 2.4:-6451115 MS.gene31141:CDS
AGACATGCATCCAGAATTGT+GGG 0.616586 2.4:-6453983 MS.gene31141:CDS
TAGATATTATGAAGACCTGA+AGG 0.618566 2.4:-6454101 MS.gene31141:CDS
GTTGTTTGTATGGCCATGGA+TGG 0.618975 2.4:-6453735 MS.gene31141:CDS
ATGAGGTGAATGTGTCCCTA+AGG 0.619227 2.4:-6453232 MS.gene31141:CDS
TGTGTCCCTAAGGAAAGCGA+TGG 0.619461 2.4:-6453222 MS.gene31141:CDS
TTGGAGATAGAAAGGCTGAA+AGG 0.620293 2.4:-6452236 MS.gene31141:CDS
CTTCTGCAGATCCTTCTCAC+GGG 0.621177 2.4:+6452856 None:intergenic
GAAAAGGAAGAGGAATTAGA+GGG 0.621506 2.4:-6452131 MS.gene31141:CDS
CTGAGGACAATAGGAAAGCG+AGG 0.623390 2.4:-6453328 MS.gene31141:CDS
TGTTTCTGGGAAAGAAGCTG+AGG 0.631054 2.4:-6453345 MS.gene31141:CDS
CTTATTATGAATGATGCTGA+GGG 0.632417 2.4:-6453791 MS.gene31141:CDS
TCTCTAACTTCATAGCATTG+TGG 0.639586 2.4:+6453525 None:intergenic
TAAACAATGGAAGTTAAACA+AGG 0.639594 2.4:-6450616 MS.gene31141:CDS
AAGTTTGAAGGATGAGTTCG+GGG 0.641151 2.4:-6450778 MS.gene31141:CDS
TGCAAATGAAAGCAATCGAG+TGG 0.643737 2.4:-6451176 MS.gene31141:CDS
CATTAGAGATCAGCAAGATG+CGG 0.643905 2.4:-6452967 MS.gene31141:intron
ATGAGTACAACCCTAGTGGT+AGG 0.644559 2.4:-6450713 MS.gene31141:CDS
ACTATGTTAAGGATCCAAGC+TGG 0.645868 2.4:-6451137 MS.gene31141:CDS
GGCTGGAACTGGAAGCTCGG+AGG 0.651348 2.4:-6452892 MS.gene31141:CDS
CATTAACAATACTAACACCA+GGG 0.651371 2.4:+6453852 None:intergenic
AATTGTGGGTGACTCAGGTG+AGG 0.654445 2.4:-6453969 MS.gene31141:CDS
ACAATGCTATGAAGTTAGAG+AGG 0.654487 2.4:-6453523 MS.gene31141:CDS
TACCTTAAAGCTGAAGACTG+AGG 0.656236 2.4:-6453282 MS.gene31141:CDS
GACAGCAAGCAAGTATGATG+AGG 0.660335 2.4:-6453249 MS.gene31141:CDS
AAACAATGGAAGTTAAACAA+GGG 0.663429 2.4:-6450615 MS.gene31141:CDS
GAAATGTATATTGAAAGCTA+TGG 0.677454 2.4:-6453914 MS.gene31141:CDS
CAAACACCTTCAGGGAAATG+GGG 0.680457 2.4:-6453378 MS.gene31141:CDS
GGACAAAGAAGGGAACTCCA+AGG 0.695584 2.4:-6451094 MS.gene31141:intron
TTAAATGAGTACAACCCTAG+TGG 0.707957 2.4:-6450717 MS.gene31141:CDS
ATTAACAATACTAACACCAG+GGG 0.713244 2.4:+6453853 None:intergenic
GGGGAGATAGACTCTTTGGG+TGG 0.722759 2.4:-6453442 MS.gene31141:CDS
AGCTTTCAAGCAGAGCACTG+TGG 0.771291 2.4:-6453500 MS.gene31141:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAAAAATCATAAAAAAATTA+AGG - chr2.4:6451096-6451115 MS.gene31141:CDS 10.0%
!!! GAGAAAAAATATTAATTTTA+AGG + chr2.4:6453713-6453732 None:intergenic 10.0%
!!! TTCATAAAATTTTACATTTT+AGG - chr2.4:6453186-6453205 MS.gene31141:CDS 10.0%
!!! TTTGATTTTTTAATATTTCA+TGG - chr2.4:6451738-6451757 MS.gene31141:intron 10.0%
!! AAATCATAAAAAAATTAAGG+AGG - chr2.4:6451099-6451118 MS.gene31141:CDS 15.0%
!! AAGAAACATGTAATATATTT+CGG - chr2.4:6451965-6451984 MS.gene31141:intron 15.0%
!! ATAAGTTATTGAAAAATAAG+AGG + chr2.4:6452229-6452248 None:intergenic 15.0%
!! CAAAATAAACAATGAAATTA+TGG + chr2.4:6453374-6453393 None:intergenic 15.0%
!! TAAGTTATTGAAAAATAAGA+GGG + chr2.4:6452228-6452247 None:intergenic 15.0%
!! TATAATTTCAAAGATATAGT+TGG - chr2.4:6451352-6451371 MS.gene31141:intron 15.0%
!!! AAATTTGCTTCTTTTAAAAA+TGG - chr2.4:6452124-6452143 MS.gene31141:CDS 15.0%
!!! ATGTTAATTTTAATGTCTAA+TGG - chr2.4:6452754-6452773 MS.gene31141:intron 15.0%
!!! TGAATTGTTTTAATTGATAT+TGG - chr2.4:6451608-6451627 MS.gene31141:intron 15.0%
!! AAATTAACATTTATATGCTG+AGG + chr2.4:6452744-6452763 None:intergenic 20.0%
!! ACTTCCATTGTTTAATTAAA+TGG + chr2.4:6454131-6454150 None:intergenic 20.0%
!! AGAAACATGTAATATATTTC+GGG - chr2.4:6451966-6451985 MS.gene31141:intron 20.0%
!! ATCTAACATATATTAGATCA+TGG + chr2.4:6453912-6453931 None:intergenic 20.0%
!! CAATTCAGTTTCTATATTTA+AGG - chr2.4:6453057-6453076 MS.gene31141:intron 20.0%
!! CTTCCATTGTTTAATTAAAT+GGG + chr2.4:6454130-6454149 None:intergenic 20.0%
!! GCTTTCTAATTATTAAGAAA+TGG + chr2.4:6453793-6453812 None:intergenic 20.0%
!! TACAAGTAAATGTAATTACT+TGG + chr2.4:6453398-6453417 None:intergenic 20.0%
!! TAGTATTGTTAATGATAAGT+CGG - chr2.4:6450910-6450929 MS.gene31141:intron 20.0%
!! TATAGATGAGAAGAAAAAAT+TGG - chr2.4:6452576-6452595 MS.gene31141:intron 20.0%
!! TTCTTAATAATTAGAAAGCA+TGG - chr2.4:6453794-6453813 MS.gene31141:CDS 20.0%
!! TTTCCCATTTAATTAAACAA+TGG - chr2.4:6454124-6454143 MS.gene31141:CDS 20.0%
!!! TACTACTATATCTATCATTT+TGG - chr2.4:6451672-6451691 MS.gene31141:intron 20.0%
!!! TTTTACATTTTAGGTGAAAT+TGG - chr2.4:6453195-6453214 MS.gene31141:CDS 20.0%
! AAAATTGGAGGAAATCAAAA+TGG - chr2.4:6452591-6452610 MS.gene31141:intron 25.0%
! AAACAATGGAAGTTAAACAA+GGG - chr2.4:6454138-6454157 MS.gene31141:CDS 25.0%
! AACTAAAAACTGTAGGTAAT+AGG + chr2.4:6452374-6452393 None:intergenic 25.0%
! AATTGAAAACACCGAAAATT+TGG + chr2.4:6453042-6453061 None:intergenic 25.0%
! ATAATTTCTGTGAAAAGGAT+GGG - chr2.4:6453456-6453475 MS.gene31141:CDS 25.0%
! ATATGTTAGATATATCACAC+AGG - chr2.4:6453921-6453940 MS.gene31141:CDS 25.0%
! ATGCTTGAACATTTCAATAA+GGG - chr2.4:6451568-6451587 MS.gene31141:intron 25.0%
! GAAATGTATATTGAAAGCTA+TGG - chr2.4:6450839-6450858 MS.gene31141:intron 25.0%
! TAAAAAGCTGAAAAGTTTGA+AGG - chr2.4:6453963-6453982 MS.gene31141:CDS 25.0%
! TAAAACTTAAGCAGAAATGT+AGG - chr2.4:6452861-6452880 MS.gene31141:CDS 25.0%
! TAAACAATGGAAGTTAAACA+AGG - chr2.4:6454137-6454156 MS.gene31141:CDS 25.0%
! TATTGAAAAATAAGAGGGAT+TGG + chr2.4:6452223-6452242 None:intergenic 25.0%
! TGAATTACAATCATCATCTT+TGG + chr2.4:6453170-6453189 None:intergenic 25.0%
! TGATGAAAAAATGATGTACT+TGG - chr2.4:6452318-6452337 MS.gene31141:intron 25.0%
! TTGTTCACATGTATTTACAA+CGG - chr2.4:6453011-6453030 MS.gene31141:intron 25.0%
! TTTCTTCTCAAAATATAGCT+TGG + chr2.4:6451951-6451970 None:intergenic 25.0%
! TTTGAAAGTGATCAATTTAC+AGG - chr2.4:6452095-6452114 MS.gene31141:CDS 25.0%
! TTTGTCATATTGTTTCATAC+TGG - chr2.4:6453274-6453293 MS.gene31141:CDS 25.0%
!! AACTAATCTTTTACAAAGTC+AGG - chr2.4:6452807-6452826 MS.gene31141:CDS 25.0%
!! AATGGTGCATTATATGTTTT+AGG + chr2.4:6453775-6453794 None:intergenic 25.0%
!! ATACAGCTATTAACTTTTTG+CGG + chr2.4:6452714-6452733 None:intergenic 25.0%
!! ATGGTGCATTATATGTTTTA+GGG + chr2.4:6453774-6453793 None:intergenic 25.0%
!! ATTTCTGCTTAAGTTTTACA+AGG + chr2.4:6452859-6452878 None:intergenic 25.0%
!! TAATTAGAAAGCATGGTAAT+TGG - chr2.4:6453801-6453820 MS.gene31141:CDS 25.0%
!!! AATTATGTTTTGAGAACTCT+TGG - chr2.4:6452409-6452428 MS.gene31141:intron 25.0%
!!! ACTTATTTTGCTTCAAGTTT+AGG + chr2.4:6453322-6453341 None:intergenic 25.0%
!!! GAAATCTTATTTAAGTTGCT+TGG - chr2.4:6452978-6452997 MS.gene31141:intron 25.0%
AAAACACCGAAAATTTGGAT+TGG + chr2.4:6453037-6453056 None:intergenic 30.0%
AAAAGTTTGAAGGATGAGTT+CGG - chr2.4:6453973-6453992 MS.gene31141:CDS 30.0%
AAAGCATGGTAATTGGTATT+GGG - chr2.4:6453808-6453827 MS.gene31141:CDS 30.0%
ACTTATTATGAATGATGCTG+AGG - chr2.4:6450961-6450980 MS.gene31141:intron 30.0%
AGATGAGAAGAAAAAATTGG+AGG - chr2.4:6452579-6452598 MS.gene31141:intron 30.0%
ATTAACAATACTAACACCAG+GGG + chr2.4:6450903-6450922 None:intergenic 30.0%
CATAATTTCTGTGAAAAGGA+TGG - chr2.4:6453455-6453474 MS.gene31141:CDS 30.0%
CATTAACAATACTAACACCA+GGG + chr2.4:6450904-6450923 None:intergenic 30.0%
CTTATTATGAATGATGCTGA+GGG - chr2.4:6450962-6450981 MS.gene31141:intron 30.0%
GAGTCATAATTTCTGTGAAA+AGG - chr2.4:6453451-6453470 MS.gene31141:CDS 30.0%
GATGCTTGAACATTTCAATA+AGG - chr2.4:6451567-6451586 MS.gene31141:intron 30.0%
TAGATATTATGAAGACCTGA+AGG - chr2.4:6450652-6450671 MS.gene31141:CDS 30.0%
TAGGGGATAAATATATCCAA+AGG + chr2.4:6453756-6453775 None:intergenic 30.0%
TCATTAACAATACTAACACC+AGG + chr2.4:6450905-6450924 None:intergenic 30.0%
TCTATTTACTGGAAATTTGC+TGG - chr2.4:6453837-6453856 MS.gene31141:CDS 30.0%
TGATTTGAATGTTTGCAAAC+AGG + chr2.4:6452951-6452970 None:intergenic 30.0%
TTACATTTACTTGTACACAG+TGG - chr2.4:6453403-6453422 MS.gene31141:CDS 30.0%
TTAGGTGAAATTGGTAGAAT+CGG - chr2.4:6453204-6453223 MS.gene31141:CDS 30.0%
! ATCACACAGGAAATTTTAGA+CGG - chr2.4:6453934-6453953 MS.gene31141:CDS 30.0%
! ATGATGATGAGTTGTTTGTA+TGG - chr2.4:6451008-6451027 MS.gene31141:intron 30.0%
! CAAAAAGTGGAAAGTATGTT+GGG - chr2.4:6451074-6451093 MS.gene31141:intron 30.0%
! GTTCTGTTTCTTTGATTTAG+AGG - chr2.4:6451632-6451651 MS.gene31141:intron 30.0%
! TAATCCTTGTTGTAGCAAAA+CGG + chr2.4:6450728-6450747 None:intergenic 30.0%
! TACAGCTATTAACTTTTTGC+GGG + chr2.4:6452713-6452732 None:intergenic 30.0%
!! CTAACAACACTTTTTGTGAT+TGG + chr2.4:6452151-6452170 None:intergenic 30.0%
!! TGGTGCATTATATGTTTTAG+GGG + chr2.4:6453773-6453792 None:intergenic 30.0%
!! TTCATACTGGTTCAATCATA+AGG - chr2.4:6453287-6453306 MS.gene31141:CDS 30.0%
!! TTGTTGTTTACAGAATGAGA+TGG - chr2.4:6452273-6452292 MS.gene31141:CDS 30.0%
!! TTTTTCAAAATCACCATCCA+TGG + chr2.4:6451034-6451053 None:intergenic 30.0%
!!! CAACATACTTTCCACTTTTT+GGG + chr2.4:6451075-6451094 None:intergenic 30.0%
AAAGGGCAGTAACTTTCAAT+GGG + chr2.4:6451147-6451166 None:intergenic 35.0%
AAAGTGGGATGACTATGTTA+AGG - chr2.4:6453605-6453624 MS.gene31141:CDS 35.0%
AAAGTTTGAAGGATGAGTTC+GGG - chr2.4:6453974-6453993 MS.gene31141:CDS 35.0%
AATTATGGCAACAAAGCAAC+AGG + chr2.4:6453359-6453378 None:intergenic 35.0%
ACAATGCTATGAAGTTAGAG+AGG - chr2.4:6451230-6451249 MS.gene31141:CDS 35.0%
ACTCATATTGACCCAAAAAG+TGG - chr2.4:6451061-6451080 MS.gene31141:intron 35.0%
ATTTGACACAGAAGACCAAA+TGG + chr2.4:6452192-6452211 None:intergenic 35.0%
CATTGGAATTGGAGATAGAA+AGG - chr2.4:6452509-6452528 MS.gene31141:intron 35.0%
GAAAAGGAAGAGGAATTAGA+GGG - chr2.4:6452622-6452641 MS.gene31141:intron 35.0%
GATTTAGAGGAGAAACATTC+TGG - chr2.4:6451645-6451664 MS.gene31141:intron 35.0%
GTGTTCATGAGAAGGTTAAA+AGG + chr2.4:6452033-6452052 None:intergenic 35.0%
GTTATGTTATGACACACCTT+TGG - chr2.4:6453737-6453756 MS.gene31141:CDS 35.0%
TAGGTGAAATTGGTAGAATC+GGG - chr2.4:6453205-6453224 MS.gene31141:CDS 35.0%
TCACAAGAAAATTCATGACC+TGG - chr2.4:6452462-6452481 MS.gene31141:CDS 35.0%
TCTCTAACTTCATAGCATTG+TGG + chr2.4:6451231-6451250 None:intergenic 35.0%
TGTTAGCATTCCTTACTCTA+TGG - chr2.4:6452165-6452184 MS.gene31141:CDS 35.0%
TTAAATGAGTACAACCCTAG+TGG - chr2.4:6454036-6454055 MS.gene31141:CDS 35.0%
TTCCAGGTAATGAATCACAT+TGG - chr2.4:6452544-6452563 MS.gene31141:intron 35.0%
TTGGATGTTGCAGAAAGAAA+AGG - chr2.4:6452432-6452451 MS.gene31141:CDS 35.0%
TTGGGTAGTGATCTATTTAC+TGG - chr2.4:6453826-6453845 MS.gene31141:CDS 35.0%
TTGTCCGTTACAACTTTGAA+CGG + chr2.4:6453645-6453664 None:intergenic 35.0%
TTTACTTGTACACAGTGGAT+TGG - chr2.4:6453408-6453427 MS.gene31141:CDS 35.0%
! AAATTCCAGAGTTCTGGTAT+TGG + chr2.4:6454069-6454088 None:intergenic 35.0%
! AATTCCAGAGTTCTGGTATT+GGG + chr2.4:6454068-6454087 None:intergenic 35.0%
! ACAAAAGTGTGTTCATGAGA+AGG + chr2.4:6452041-6452060 None:intergenic 35.0%
! CATGAACACACTTTTGTGAT+AGG - chr2.4:6452044-6452063 MS.gene31141:intron 35.0%
! CCAAAAAGTGGAAAGTATGT+TGG - chr2.4:6451073-6451092 MS.gene31141:intron 35.0%
! GAAAGCATGGTAATTGGTAT+TGG - chr2.4:6453807-6453826 MS.gene31141:CDS 35.0%
! GCTTACAGTCTGTTACATTT+TGG - chr2.4:6451699-6451718 MS.gene31141:intron 35.0%
!! AAAGTTGTAACGGACAAAGA+AGG - chr2.4:6453648-6453667 MS.gene31141:CDS 35.0%
!! AAGTTGTAACGGACAAAGAA+GGG - chr2.4:6453649-6453668 MS.gene31141:CDS 35.0%
!! AGTCTTCAGCTTTAAGGTAT+TGG + chr2.4:6451470-6451489 None:intergenic 35.0%
!! ATTGATAATGATAAGACCCC+TGG - chr2.4:6450884-6450903 MS.gene31141:intron 35.0%
!! CCAACATACTTTCCACTTTT+TGG + chr2.4:6451076-6451095 None:intergenic 35.0%
!! GAATTTTAGAGAAGGAAGGA+AGG - chr2.4:6454083-6454102 MS.gene31141:CDS 35.0%
!! TCTCTAAAATTCCAGAGTTC+TGG + chr2.4:6454075-6454094 None:intergenic 35.0%
!! TCTGGAATTTTAGAGAAGGA+AGG - chr2.4:6454079-6454098 MS.gene31141:CDS 35.0%
!! TTGTCCTCTAAAGTTCCAAA+GGG + chr2.4:6451164-6451183 None:intergenic 35.0%
!! TTTGTCCTCTAAAGTTCCAA+AGG + chr2.4:6451165-6451184 None:intergenic 35.0%
!!! ATGTTTTGAGAACTCTTGGT+TGG - chr2.4:6452413-6452432 MS.gene31141:intron 35.0%
!!! GAACTCTGGAATTTTAGAGA+AGG - chr2.4:6454075-6454094 MS.gene31141:CDS 35.0%
AAAATTCATGACCTGGAGAG+AGG - chr2.4:6452469-6452488 MS.gene31141:CDS 40.0%
AAAGCTGAAGACTGAGGAAT+TGG - chr2.4:6451477-6451496 MS.gene31141:intron 40.0%
AAGGAAAGCGATGGATCAAA+AGG - chr2.4:6451540-6451559 MS.gene31141:intron 40.0%
AAGTTTGAAGGATGAGTTCG+GGG - chr2.4:6453975-6453994 MS.gene31141:CDS 40.0%
AATGATGCTGAGGGTCATTT+GGG - chr2.4:6450971-6450990 MS.gene31141:intron 40.0%
ACCAAATGGTCCATAGAGTA+AGG + chr2.4:6452178-6452197 None:intergenic 40.0%
ACTATGTTAAGGATCCAAGC+TGG - chr2.4:6453616-6453635 MS.gene31141:CDS 40.0%
ACTTGATATCAAGCCATTCG+TGG - chr2.4:6453482-6453501 MS.gene31141:CDS 40.0%
ACTTGATGCTAAACAGGCAT+TGG - chr2.4:6452492-6452511 MS.gene31141:intron 40.0%
AGACATGCATCCAGAATTGT+GGG - chr2.4:6450770-6450789 MS.gene31141:CDS 40.0%
ATAGTTGGCAAACACCTTCA+GGG - chr2.4:6451367-6451386 MS.gene31141:intron 40.0%
ATGAGTTGTTTGTATGGCCA+TGG - chr2.4:6451014-6451033 MS.gene31141:intron 40.0%
CAAAGGGCAGTAACTTTCAA+TGG + chr2.4:6451148-6451167 None:intergenic 40.0%
CATCTTTGGACACAAACAAC+TGG + chr2.4:6453156-6453175 None:intergenic 40.0%
CATTAGAGATCAGCAAGATG+CGG - chr2.4:6451786-6451805 MS.gene31141:intron 40.0%
CATTGAAAGTTACTGCCCTT+TGG - chr2.4:6451146-6451165 MS.gene31141:CDS 40.0%
CCAAACTGAACAACTGCAAA+GGG + chr2.4:6451190-6451209 None:intergenic 40.0%
CCTGAAGGATGATTACTACA+AGG - chr2.4:6450667-6450686 MS.gene31141:CDS 40.0%
CCTTGTAGTAATCATCCTTC+AGG + chr2.4:6450670-6450689 None:intergenic 40.0%
CTAAGGATCATGAAAAAGCC+AGG - chr2.4:6451840-6451859 MS.gene31141:intron 40.0%
CTCCAATGTGATTCATTACC+TGG + chr2.4:6452549-6452568 None:intergenic 40.0%
GATCCTTAGATACTTTCTCC+TGG + chr2.4:6451829-6451848 None:intergenic 40.0%
GCAGCTGAACTAAAAACTGT+AGG + chr2.4:6452381-6452400 None:intergenic 40.0%
GCATCCGTTCAAAGTTGTAA+CGG - chr2.4:6453638-6453657 MS.gene31141:CDS 40.0%
GGAAAAGGAAGAGGAATTAG+AGG - chr2.4:6452621-6452640 MS.gene31141:intron 40.0%
GGAAGATCTTCAACAAACTC+TGG - chr2.4:6452648-6452667 MS.gene31141:intron 40.0%
GGCATTAGAAGAGCAACAAA+AGG - chr2.4:6452294-6452313 MS.gene31141:CDS 40.0%
GTACTTGGCAGAAGAACATA+AGG - chr2.4:6452333-6452352 MS.gene31141:intron 40.0%
TACCTTAAAGCTGAAGACTG+AGG - chr2.4:6451471-6451490 MS.gene31141:intron 40.0%
TATAGTTGGCAAACACCTTC+AGG - chr2.4:6451366-6451385 MS.gene31141:intron 40.0%
TCAACAAACTCTGGTTGTTC+AGG - chr2.4:6452657-6452676 MS.gene31141:intron 40.0%
TCCAAACTGAACAACTGCAA+AGG + chr2.4:6451191-6451210 None:intergenic 40.0%
TCCTTACTCTATGGACCATT+TGG - chr2.4:6452174-6452193 MS.gene31141:CDS 40.0%
TGCAAATGAAAGCAATCGAG+TGG - chr2.4:6453577-6453596 MS.gene31141:CDS 40.0%
TGTTCAGTTTGGAAGAGAGT+GGG - chr2.4:6451198-6451217 MS.gene31141:CDS 40.0%
TTCCTCAGTCTTCAGCTTTA+AGG + chr2.4:6451476-6451495 None:intergenic 40.0%
TTCGTGAAGTCATTGTACCT+TGG + chr2.4:6453679-6453698 None:intergenic 40.0%
TTGATCCATCGCTTTCCTTA+GGG + chr2.4:6451539-6451558 None:intergenic 40.0%
TTGGAGATAGAAAGGCTGAA+AGG - chr2.4:6452517-6452536 MS.gene31141:intron 40.0%
TTGTTCAGTTTGGAAGAGAG+TGG - chr2.4:6451197-6451216 MS.gene31141:CDS 40.0%
TTTGATCCATCGCTTTCCTT+AGG + chr2.4:6451540-6451559 None:intergenic 40.0%
! CAACGGCCAATCCAAATTTT+CGG - chr2.4:6453028-6453047 MS.gene31141:intron 40.0%
! GGGACTTGAAAACTGTTTCT+GGG - chr2.4:6451395-6451414 MS.gene31141:intron 40.0%
! TGCTGGTGTTAGCACTTATT+TGG - chr2.4:6453854-6453873 MS.gene31141:CDS 40.0%
!! CACGAGCTTGTTCTGATTTT+CGG + chr2.4:6450607-6450626 None:intergenic 40.0%
!! GTACCAGGAGAAAGTATCTA+AGG - chr2.4:6451823-6451842 MS.gene31141:intron 40.0%
!! TGCTAAACAGGCATTGGAAT+TGG - chr2.4:6452498-6452517 MS.gene31141:intron 40.0%
AAGGAGGAGCTGATCATGAA+CGG - chr2.4:6451115-6451134 MS.gene31141:CDS 45.0%
AATCGAGTGGTGCTCAAAGT+GGG - chr2.4:6453590-6453609 MS.gene31141:CDS 45.0%
ACAAGCTCGTGAGTCTGATT+TGG - chr2.4:6450616-6450635 MS.gene31141:CDS 45.0%
AGATAGACTCTTTGGGTGGA+TGG - chr2.4:6451315-6451334 MS.gene31141:CDS 45.0%
ATGACTCGAGCAGTGTTCTT+TGG + chr2.4:6453438-6453457 None:intergenic 45.0%
ATGAGGTGAATGTGTCCCTA+AGG - chr2.4:6451521-6451540 MS.gene31141:intron 45.0%
ATGAGTACAACCCTAGTGGT+AGG - chr2.4:6454040-6454059 MS.gene31141:CDS 45.0%
ATGGGAAACACCTTCCTTCA+AGG + chr2.4:6454112-6454131 None:intergenic 45.0%
CAAAATGGAGCTGCAGGAAA+AGG - chr2.4:6452606-6452625 MS.gene31141:intron 45.0%
CAAACACCTTCAGGGAAATG+GGG - chr2.4:6451375-6451394 MS.gene31141:intron 45.0%
CCCTTTGCAGTTGTTCAGTT+TGG - chr2.4:6451187-6451206 MS.gene31141:CDS 45.0%
CGAACTTATTTCCCGTGAGA+AGG - chr2.4:6451886-6451905 MS.gene31141:intron 45.0%
CTGTGGTAAGAGGGATTACT+TGG - chr2.4:6451270-6451289 MS.gene31141:CDS 45.0%
GAAATTGGTAGAATCGGGTC+AGG - chr2.4:6453210-6453229 MS.gene31141:CDS 45.0%
GAATGATGCTGAGGGTCATT+TGG - chr2.4:6450970-6450989 MS.gene31141:intron 45.0%
GACAGCAAGCAAGTATGATG+AGG - chr2.4:6451504-6451523 MS.gene31141:intron 45.0%
GAGACATGCATCCAGAATTG+TGG - chr2.4:6450769-6450788 MS.gene31141:CDS 45.0%
GAGAGGACTTGATGCTAAAC+AGG - chr2.4:6452486-6452505 MS.gene31141:intron 45.0%
GCAAACACCTTCAGGGAAAT+GGG - chr2.4:6451374-6451393 MS.gene31141:intron 45.0%
GGAAAGAAGCTGAGGACAAT+AGG - chr2.4:6451416-6451435 MS.gene31141:intron 45.0%
GGAAATCAAAATGGAGCTGC+AGG - chr2.4:6452600-6452619 MS.gene31141:intron 45.0%
GGGGACTTGAAAACTGTTTC+TGG - chr2.4:6451394-6451413 MS.gene31141:intron 45.0%
GTATTGGGTACCTACCACTA+GGG + chr2.4:6454053-6454072 None:intergenic 45.0%
GTTGTTTGTATGGCCATGGA+TGG - chr2.4:6451018-6451037 MS.gene31141:intron 45.0%
TGACTCGAGCAGTGTTCTTT+GGG + chr2.4:6453437-6453456 None:intergenic 45.0%
TGTTGCTAAGCATTCAGCTC+TGG - chr2.4:6450817-6450836 MS.gene31141:intron 45.0%
TTTCCCTGCTATGAGCTGTA+TGG - chr2.4:6453885-6453904 MS.gene31141:CDS 45.0%
! CTGTCCGTTTTGCTACAACA+AGG - chr2.4:6450721-6450740 MS.gene31141:CDS 45.0%
!! ACTGCCCTTTGGAACTTTAG+AGG - chr2.4:6451157-6451176 MS.gene31141:CDS 45.0%
!! GAGGGATTACTTGGCTTTAC+AGG - chr2.4:6451279-6451298 MS.gene31141:CDS 45.0%
!! TGTTTCTGGGAAAGAAGCTG+AGG - chr2.4:6451408-6451427 MS.gene31141:intron 45.0%
!! TTACTTGGCTTTACAGGAGC+AGG - chr2.4:6451285-6451304 MS.gene31141:CDS 45.0%
AAAGCGAGGAAGCTTCTCTC+TGG - chr2.4:6451439-6451458 MS.gene31141:intron 50.0%
AAGGCTGAAAGGAGCTTTCC+AGG - chr2.4:6452528-6452547 MS.gene31141:intron 50.0%
AATTGTGGGTGACTCAGGTG+AGG - chr2.4:6450784-6450803 MS.gene31141:CDS 50.0%
ACCTGAGTCACCCACAATTC+TGG + chr2.4:6450783-6450802 None:intergenic 50.0%
ACTTTGAACGGATGCCAGCT+TGG + chr2.4:6453633-6453652 None:intergenic 50.0%
AGCGGGGAGATAGACTCTTT+GGG - chr2.4:6451308-6451327 MS.gene31141:CDS 50.0%
AGGAAGGAAGGCTTCCTTGA+AGG - chr2.4:6454095-6454114 MS.gene31141:CDS 50.0%
AGGAAGGCTTCCTTGAAGGA+AGG - chr2.4:6454099-6454118 MS.gene31141:CDS 50.0%
AGGAGGAGCTGATCATGAAC+GGG - chr2.4:6451116-6451135 MS.gene31141:CDS 50.0%
CAATCGAGTGGTGCTCAAAG+TGG - chr2.4:6453589-6453608 MS.gene31141:CDS 50.0%
CAGTTTGGAAGAGAGTGGGA+TGG - chr2.4:6451202-6451221 MS.gene31141:CDS 50.0%
CTCTTAGCTGCTTCCACGAA+TGG + chr2.4:6453498-6453517 None:intergenic 50.0%
CTGAGGACAATAGGAAAGCG+AGG - chr2.4:6451425-6451444 MS.gene31141:intron 50.0%
CTTCTGCAGATCCTTCTCAC+GGG + chr2.4:6451900-6451919 None:intergenic 50.0%
GAGGAAGCTTCTCTCTGGTT+TGG - chr2.4:6451444-6451463 MS.gene31141:intron 50.0%
GCTTCTGCAGATCCTTCTCA+CGG + chr2.4:6451901-6451920 None:intergenic 50.0%
GGAAGAGGAATTAGAGGGTG+TGG - chr2.4:6452627-6452646 MS.gene31141:intron 50.0%
GGACAAAGAAGGGAACTCCA+AGG - chr2.4:6453659-6453678 MS.gene31141:CDS 50.0%
GGATCATGAAAAAGCCAGGC+TGG - chr2.4:6451844-6451863 MS.gene31141:intron 50.0%
GGCAAACACCTTCAGGGAAA+TGG - chr2.4:6451373-6451392 MS.gene31141:intron 50.0%
GGTACCCAATACCAGAACTC+TGG - chr2.4:6454061-6454080 MS.gene31141:CDS 50.0%
GGTCCATACAGCTCATAGCA+GGG + chr2.4:6453891-6453910 None:intergenic 50.0%
TAGCATCAAGTCCTCTCTCC+AGG + chr2.4:6452483-6452502 None:intergenic 50.0%
TCAAGTCCCCATTTCCCTGA+AGG + chr2.4:6451384-6451403 None:intergenic 50.0%
TCCAGAATTGTGGGTGACTC+AGG - chr2.4:6450779-6450798 MS.gene31141:CDS 50.0%
TGAAAAAGCCAGGCTGGAAC+TGG - chr2.4:6451850-6451869 MS.gene31141:intron 50.0%
TGGTCCATACAGCTCATAGC+AGG + chr2.4:6453892-6453911 None:intergenic 50.0%
TGTGTCCCTAAGGAAAGCGA+TGG - chr2.4:6451531-6451550 MS.gene31141:intron 50.0%
! GGTATTGGGTACCTACCACT+AGG + chr2.4:6454054-6454073 None:intergenic 50.0%
! TGCAGTAGCTACAGCTCTGA+AGG - chr2.4:6454011-6454030 MS.gene31141:CDS 50.0%
!! AAGCAGAGCACTGTGGTAAG+AGG - chr2.4:6451260-6451279 MS.gene31141:CDS 50.0%
!! AGCAGAGCACTGTGGTAAGA+GGG - chr2.4:6451261-6451280 MS.gene31141:CDS 50.0%
!! AGCTTTCAAGCAGAGCACTG+TGG - chr2.4:6451253-6451272 MS.gene31141:CDS 50.0%
AGAGATCAGCAAGATGCGGC+AGG - chr2.4:6451790-6451809 MS.gene31141:intron 55.0%
GAAGGATGAGTTCGGGGATG+AGG - chr2.4:6453981-6454000 MS.gene31141:CDS 55.0%
GAGCGGGGAGATAGACTCTT+TGG - chr2.4:6451307-6451326 MS.gene31141:CDS 55.0%
GCAAAACGGACAGCGAAACG+TGG + chr2.4:6450714-6450733 None:intergenic 55.0%
GGAGCTGCAGGAAAAGGAAG+AGG - chr2.4:6452612-6452631 MS.gene31141:intron 55.0%
GGGGAGATAGACTCTTTGGG+TGG - chr2.4:6451311-6451330 MS.gene31141:CDS 55.0%
! TGGCTTTACAGGAGCAGGAG+CGG - chr2.4:6451290-6451309 MS.gene31141:CDS 55.0%
CCAGGCTGGAACTGGAAGCT+CGG - chr2.4:6451858-6451877 MS.gene31141:intron 60.0%
GCTTTACAGGAGCAGGAGCG+GGG - chr2.4:6451292-6451311 MS.gene31141:CDS 60.0%
GGCTTTACAGGAGCAGGAGC+GGG - chr2.4:6451291-6451310 MS.gene31141:CDS 60.0%
! GCAGGTTGAACGCGAGTACC+AGG - chr2.4:6451808-6451827 MS.gene31141:intron 60.0%
CCGAGCTTCCAGTTCCAGCC+TGG + chr2.4:6451861-6451880 None:intergenic 65.0%
GGCTGGAACTGGAAGCTCGG+AGG - chr2.4:6451861-6451880 MS.gene31141:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 6450599 6454176 6450599 ID=MS.gene31141
chr2.4 mRNA 6450599 6454176 6450599 ID=MS.gene31141.t1;Parent=MS.gene31141
chr2.4 exon 6453186 6454176 6453186 ID=MS.gene31141.t1.exon1;Parent=MS.gene31141.t1
chr2.4 CDS 6453186 6454176 6453186 ID=cds.MS.gene31141.t1;Parent=MS.gene31141.t1
chr2.4 exon 6452802 6452983 6452802 ID=MS.gene31141.t1.exon2;Parent=MS.gene31141.t1
chr2.4 CDS 6452802 6452983 6452802 ID=cds.MS.gene31141.t1;Parent=MS.gene31141.t1
chr2.4 exon 6452421 6452489 6452421 ID=MS.gene31141.t1.exon3;Parent=MS.gene31141.t1
chr2.4 CDS 6452421 6452489 6452421 ID=cds.MS.gene31141.t1;Parent=MS.gene31141.t1
chr2.4 exon 6452046 6452330 6452046 ID=MS.gene31141.t1.exon4;Parent=MS.gene31141.t1
chr2.4 CDS 6452046 6452330 6452046 ID=cds.MS.gene31141.t1;Parent=MS.gene31141.t1
chr2.4 exon 6451095 6451352 6451095 ID=MS.gene31141.t1.exon5;Parent=MS.gene31141.t1
chr2.4 CDS 6451095 6451352 6451095 ID=cds.MS.gene31141.t1;Parent=MS.gene31141.t1
chr2.4 exon 6450599 6450832 6450599 ID=MS.gene31141.t1.exon6;Parent=MS.gene31141.t1
chr2.4 CDS 6450599 6450832 6450599 ID=cds.MS.gene31141.t1;Parent=MS.gene31141.t1
Gene Sequence

>MS.gene31141

ATGTACCGAAAATCAGAACAAGCTCGTGAGTCTGATTTGGAGTACTACAAGCGTAGATATTATGAAGACCTGAAGGATGATTACTACAAGGAAACGCTCAAAATCTCTGATTCCACGTTTCGCTGTCCGTTTTGCTACAACAAGGATTACTACTCTTTGAGTGAGCTATTGAGACATGCATCCAGAATTGTGGGTGACTCAGGTGAGGCAGTTAAAGATGTTGCTAAGCATTCAGCTCTGGAAATGTATATTGAAAGCTATGGTGATAAGTTAACTGCTGTTACTATTGATAATGATAAGACCCCTGGTGTTAGTATTGTTAATGATAAGTCGGTTAATTTGAGTATCGCTAATGAGAAGTCACTTATTATGAATGATGCTGAGGGTCATTTGGGTAATGTGAATGTTGATGATGATGAGTTGTTTGTATGGCCATGGATGGTGATTTTGAAAAATATTGTTACTCATATTGACCCAAAAAGTGGAAAGTATGTTGGGAAAAATCATAAAAAAATTAAGGAGGAGCTGATCATGAACGGGTTTCACCCATTGAAAGTTACTGCCCTTTGGAACTTTAGAGGACAAACACCCTTTGCAGTTGTTCAGTTTGGAAGAGAGTGGGATGGTTTCCACAATGCTATGAAGTTAGAGAGGAGCTTTCAAGCAGAGCACTGTGGTAAGAGGGATTACTTGGCTTTACAGGAGCAGGAGCGGGGAGATAGACTCTTTGGGTGGATGGCACGTCGTGATGACTATAATTTCAAAGATATAGTTGGCAAACACCTTCAGGGAAATGGGGACTTGAAAACTGTTTCTGGGAAAGAAGCTGAGGACAATAGGAAAGCGAGGAAGCTTCTCTCTGGTTTGGCCAATACCTTAAAGCTGAAGACTGAGGAATTGGAACAGACAGCAAGCAAGTATGATGAGGTGAATGTGTCCCTAAGGAAAGCGATGGATCAAAAGGAAAAGATGCTTGAACATTTCAATAAGGGTATGTTGATAGTTAAACTGAATTGTTTTAATTGATATTGGTGTTCTGTTTCTTTGATTTAGAGGAGAAACATTCTGGTTTTTACTACTATATCTATCATTTTGGTGTAGCTTACAGTCTGTTACATTTTGGAATGATTTGTAGTTGATTTGATTTTTTAATATTTCATGGTAGCTTAGTCTGTTTTATATTGTTTCATTAGAGATCAGCAAGATGCGGCAGGTTGAACGCGAGTACCAGGAGAAAGTATCTAAGGATCATGAAAAAGCCAGGCTGGAACTGGAAGCTCGGAGGAACGAACTTATTTCCCGTGAGAAGGATCTGCAGAAGCGTGAAGCAGATAATCACAATGAGAAAGCCAAGCTATATTTTGAGAAGAAACATGTAATATATTTCGGGTCTTTTAATTTATGATAGCAATGCTAAATGAATTATTCTCTCCTTTTAACCTTCTCATGAACACACTTTTGTGATAGGTCAATTTCTAAAAATTTTAACACATTTATTTGAAAGTGATCAATTTACAGGAGAACTAAATTTGCTTCTTTTAAAAATGGACCAATCACAAAAAGTGTTGTTAGCATTCCTTACTCTATGGACCATTTGGTCTTCTGTGTCAAATTATGTATACCAATCCCTCTTATTTTTCAATAACTTATGACATATTAAATCTGTTCTTCATCTTGTTGTTTACAGAATGAGATGGCATTAGAAGAGCAACAAAAGGCTGATGAAAAAATGATGTACTTGGCAGAAGAACATAAGGCACACTTTTCATTTTCCTATTACCTACAGTTTTTAGTTCAGCTGCATGTATATAATTATGTTTTGAGAACTCTTGGTTGGATGTTGCAGAAAGAAAAGGAGAAACTTCACAAGAAAATTCATGACCTGGAGAGAGGACTTGATGCTAAACAGGCATTGGAATTGGAGATAGAAAGGCTGAAAGGAGCTTTCCAGGTAATGAATCACATTGGAGAGACTGATATAGATGAGAAGAAAAAATTGGAGGAAATCAAAATGGAGCTGCAGGAAAAGGAAGAGGAATTAGAGGGTGTGGAAGATCTTCAACAAACTCTGGTTGTTCAGGAGCGCAAAACTAATGACGAATTGCAAGATGCCCGCAAAAAGTTAATAGCTGTATGTATCTTCCTCAGCATATAAATGTTAATTTTAATGTCTAATGGTCTGAAAATCAACTTTAAAATGTCTTCTGTAACTAATCTTTTACAAAGTCAGGATATATTGTTTTATTTGTATAAATTGCCTTGTAAAACTTAAGCAGAAATGTAGGATCATTTATATTTTTTAATTGACATACAGCAGTTTATATAATACTACTACTAAAAGAAAAGTGTCCTGTTTGCAAACATTCAAATCATGTAGTTGAAATCTTATTTAAGTTGCTTGGAAGACGTGTCTTGTTCACATGTATTTACAACGGCCAATCCAAATTTTCGGTGTTTTCAATTCAGTTTCTATATTTAAGGAATTTCACTTTATCAACGTATCATCTTATCACGTGAATAACTTGCTTGCTTATCTAAACTGTCTATTTGCTATCCAGTTGTTTGTGTCCAAAGATGATGATTGTAATTCATAAAATTTTACATTTTAGGTGAAATTGGTAGAATCGGGTCAGGTTTATGAAAAGAGCAGATTTTCTTTTTACATTTTCAGTTAATTTGTCATATTGTTTCATACTGGTTCAATCATAAGGTATCTGATACCTAAACTTGAAGCAAAATAAGTTCAAGTAGTTTGTTCCTGTTGCTTTGTTGCCATAATTTCATTGTTTATTTTGTCCAAGTAATTACATTTACTTGTACACAGTGGATTGGCTGCCCAAAGAACACTGCTCGAGTCATAATTTCTGTGAAAAGGATGGGCGAACTTGATATCAAGCCATTCGTGGAAGCAGCTAAGAGAAAATTTTCTGATGAAATGAATGAGAAAGCAGTAACTAAGAGAGAATTTTCAGAGAAAGTGCAAATGAAAGCAATCGAGTGGTGCTCAAAGTGGGATGACTATGTTAAGGATCCAAGCTGGCATCCGTTCAAAGTTGTAACGGACAAAGAAGGGAACTCCAAGGTACAATGACTTCACGAATTATGTTTGTTCCTTAAAATTAATATTTTTTCTCAGCTGTTATGTTATGACACACCTTTGGATATATTTATCCCCTAAAACATATAATGCACCATTTCTTAATAATTAGAAAGCATGGTAATTGGTATTGGGTAGTGATCTATTTACTGGAAATTTGCTGGTGTTAGCACTTATTTGGCATGTTTGTTTCCCTGCTATGAGCTGTATGGACCATGATCTAATATATGTTAGATATATCACACAGGAAATTTTAGACGGAGAAGATAAAAAGCTGAAAAGTTTGAAGGATGAGTTCGGGGATGAGGTGCATGATGCAGTAGCTACAGCTCTGAAGGAGTTAAATGAGTACAACCCTAGTGGTAGGTACCCAATACCAGAACTCTGGAATTTTAGAGAAGGAAGGAAGGCTTCCTTGAAGGAAGGTGTTTCCCATTTAATTAAACAATGGAAGTTAAACAAGGGAAAGAAAGCTTATTGA
Protein sequence

>MS.gene31141.t1

MYRKSEQARESDLEYYKRRYYEDLKDDYYKETLKISDSTFRCPFCYNKDYYSLSELLRHASRIVGDSGEAVKDVAKHSALEMYIESYGDKLTAVTIDNDKTPGVSIVNDKSVNLSIANEKSLIMNDAEGHLGNVNVDDDELFVWPWMVILKNIVTHIDPKSGKYVGKNHKKIKEELIMNGFHPLKVTALWNFRGQTPFAVVQFGREWDGFHNAMKLERSFQAEHCGKRDYLALQEQERGDRLFGWMARRDDYNFKDIVGKHLQGNGDLKTVSGKEAEDNRKARKLLSGLANTLKLKTEELEQTASKYDEVNVSLRKAMDQKEKMLEHFNKEISKMRQVEREYQEKVSKDHEKARLELEARRNELISREKDLQKREADNHNEKAKLYFEKKHNEMALEEQQKADEKMMYLAEEHKKEKEKLHKKIHDLERGLDAKQALELEIERLKGAFQVMNHIGETDIDEKKKLEEIKMELQEKEEELEGVEDLQQTLVVQERKTNDELQDARKKLIAWIGCPKNTARVIISVKRMGELDIKPFVEAAKRKFSDEMNEKAVTKREFSEKVQMKAIEWCSKWDDYVKDPSWHPFKVVTDKEGNSKEILDGEDKKLKSLKDEFGDEVHDAVATALKELNEYNPSGRYPIPELWNFREGRKASLKEGVSHLIKQWKLNKGKKAY