AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31185

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31185.t1 MTR_2g096180 97.952 537 11 0 1 537 73 609 0.0 1064
MS.gene31185.t1 MTR_2g096180 97.952 537 11 0 1 537 24 560 0.0 1062
MS.gene31185.t1 MTR_2g096180 91.478 575 11 1 1 537 73 647 0.0 1045
MS.gene31185.t1 MTR_2g096180 91.478 575 11 1 1 537 24 598 0.0 1044
MS.gene31185.t1 MTR_4g061843 72.603 584 115 8 1 542 74 654 0.0 727
MS.gene31185.t1 MTR_4g061843 72.603 584 115 8 1 542 15 595 0.0 724
MS.gene31185.t1 MTR_4g061843 67.925 583 111 9 1 542 74 621 0.0 654
MS.gene31185.t1 MTR_4g061843 74.138 522 92 8 1 482 74 592 0.0 632
MS.gene31185.t1 MTR_4g061960 76.292 329 71 5 219 542 4 330 1.56e-162 467
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31185.t1 AT1G07705 70.588 544 136 9 1 537 74 600 0.0 696
MS.gene31185.t1 AT1G07705 71.516 488 117 8 1 481 74 546 0.0 610
MS.gene31185.t1 AT5G59710 59.792 577 146 13 1 537 73 603 0.0 578
MS.gene31185.t1 AT5G59710 59.792 577 146 13 1 537 73 603 0.0 578
MS.gene31185.t1 AT5G59710 60.536 522 122 12 1 482 73 550 7.54e-176 509

Find 152 sgRNAs with CRISPR-Local

Find 315 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCATTAAGTTGTTCTTTC+TGG 0.035131 2.1:+7290770 None:intergenic
GGACCTGCATTTCCCAAAAT+TGG 0.156530 2.1:+7292279 None:intergenic
AATTCTCCAAATACTGTTTC+TGG 0.167736 2.1:-7290220 MS.gene31185:CDS
ATTGGGAGTATCCCCAATTT+TGG 0.178580 2.1:-7292292 MS.gene31185:CDS
GCTTCACGTCTAAATTTAAA+TGG 0.188768 2.1:-7292171 MS.gene31185:CDS
GAAAATCTTCACAAGACTTT+TGG 0.198132 2.1:-7289941 MS.gene31185:CDS
AGGTCTGCTGGTTTCAGTTT+GGG 0.222410 2.1:-7290596 MS.gene31185:CDS
ACATTTGCTGAAGGCGAAAC+TGG 0.257273 2.1:+7290143 None:intergenic
ATATAGCTGTGCTTCATCTT+TGG 0.260832 2.1:+7289596 None:intergenic
TTCAGGCTCTTTACGAAAAC+AGG 0.265173 2.1:-7291357 MS.gene31185:intron
AGTACATCACTTGAATTCTA+TGG 0.279511 2.1:-7291563 MS.gene31185:CDS
GTAATAGGCAGCTTCAATTT+TGG 0.284169 2.1:+7288520 None:intergenic
CAGCTGTAAACCAGTCCTTT+AGG 0.284820 2.1:-7290120 MS.gene31185:CDS
TCTGGAGGATTGTCCATTCC+TGG 0.287243 2.1:-7292198 MS.gene31185:CDS
TATAGCTGTGCTTCATCTTT+GGG 0.291914 2.1:+7289597 None:intergenic
TCCGCGGATAACAAGTTCTA+TGG 0.295779 2.1:-7292259 MS.gene31185:CDS
GAGGTCTGCTGGTTTCAGTT+TGG 0.299623 2.1:-7290597 MS.gene31185:CDS
CTGCAGATGGGGAGGTCTGC+TGG 0.305802 2.1:-7290608 MS.gene31185:intron
CCTCAGGTAATTTCAATGTT+AGG 0.314958 2.1:-7291637 MS.gene31185:CDS
GACCTCCTGGCATTGGATTA+AGG 0.320047 2.1:-7290249 MS.gene31185:CDS
CCTGATCCATTTGGTCTGCT+TGG 0.327445 2.1:-7290058 MS.gene31185:CDS
GGAAGCTCTCATGGACATTC+AGG 0.340474 2.1:-7292447 MS.gene31185:CDS
GCGTTGGATATGATTTACTA+TGG 0.346287 2.1:-7288464 MS.gene31185:CDS
GACCTGCATTTCCCAAAATT+GGG 0.351945 2.1:+7292280 None:intergenic
CCCGTACCAGAAACAGTATT+TGG 0.373729 2.1:+7290214 None:intergenic
TCTATGGGAAACATGGTTGC+TGG 0.374454 2.1:-7292243 MS.gene31185:CDS
TCCAACGCGAACTGGAAAAT+CGG 0.375159 2.1:+7288436 None:intergenic
ACAAGTCGTCCTAGTTCTGC+TGG 0.377291 2.1:-7291475 MS.gene31185:CDS
ACAGTATTTGGAGAATTTAG+AGG 0.382920 2.1:+7290226 None:intergenic
TCTGGTGTTGTTGATACTGC+TGG 0.384992 2.1:+7290173 None:intergenic
AAATCATATCCAACGCGAAC+TGG 0.390802 2.1:+7288428 None:intergenic
CAATCTGCTCCTGATCCATT+TGG 0.393312 2.1:-7290067 MS.gene31185:CDS
TCCAACGCGAACAGGAAAAT+CGG 0.398650 2.1:+7288479 None:intergenic
TTCCATAGTCTTGTGGTAAT+AGG 0.402096 2.1:+7288505 None:intergenic
AGCTGTAAACCAGTCCTTTA+GGG 0.408396 2.1:-7290119 MS.gene31185:CDS
GGCGAAACTGGGATTGGTTC+TGG 0.410215 2.1:+7290155 None:intergenic
TTGGCTTGTTAAGTGTAATC+AGG 0.413858 2.1:-7290039 MS.gene31185:CDS
ATACACAGTACCTTTGTATC+CGG 0.414552 2.1:+7291268 None:intergenic
AACCAGTCCTTTAGGGATCA+TGG 0.415080 2.1:-7290112 MS.gene31185:CDS
AAATCATATCCAACGCGAAC+AGG 0.416311 2.1:+7288471 None:intergenic
TTGACAAGCGGCTCCATGTT+GGG 0.416934 2.1:+7289212 None:intergenic
GATCTGACATCTCTTGCTCT+TGG 0.425564 2.1:-7290004 MS.gene31185:CDS
TTAAATGGAAACAGCGGATC+TGG 0.427099 2.1:-7292156 MS.gene31185:CDS
TCCAAATACTGTTTCTGGTA+CGG 0.434596 2.1:-7290215 MS.gene31185:CDS
AGTGATGTACTGCTTGCATA+TGG 0.441539 2.1:+7291575 None:intergenic
TGCCTATTACCACAAGACTA+TGG 0.444828 2.1:-7288507 MS.gene31185:CDS
CTATCTCATGGAAGCTCTCA+TGG 0.446529 2.1:-7292456 MS.gene31185:CDS
CCAAATACTGTTTCTGGTAC+GGG 0.454336 2.1:-7290214 MS.gene31185:CDS
TATTTGTACACAGGTGGTAA+TGG 0.462985 2.1:-7290814 MS.gene31185:intron
CTGGAGGATTGTCCATTCCT+GGG 0.463577 2.1:-7292197 MS.gene31185:CDS
TGGTAATGGAGAATTTACTA+TGG 0.464045 2.1:-7290800 MS.gene31185:CDS
GTACATCACTTGAATTCTAT+GGG 0.464321 2.1:-7291562 MS.gene31185:CDS
ACGATAAATAACATGCCAAC+TGG 0.465876 2.1:-7292695 None:intergenic
CCTTTGTATCCGGGTAAAGC+TGG 0.469299 2.1:+7291278 None:intergenic
AACAAGCCAAGCAGACCAAA+TGG 0.472910 2.1:+7290052 None:intergenic
TGCTGGATGAGTTGATCATA+TGG 0.474187 2.1:+7290190 None:intergenic
TGAAAGTGGACCTCCAGCAC+TGG 0.474339 2.1:+7291603 None:intergenic
TTGGTCTGAGGAACCAGCTA+AGG 0.475047 2.1:-7289912 MS.gene31185:CDS
TGCATATGGCTTTGTGAAAG+TGG 0.479067 2.1:+7291589 None:intergenic
CGGACAGTTTCGAAAGTGCT+TGG 0.479912 2.1:+7289149 None:intergenic
ACTAGCGGACCTCCTGGCAT+TGG 0.481858 2.1:-7290256 MS.gene31185:CDS
GGAAATTCTTATCCCAGTGC+TGG 0.482050 2.1:-7291616 MS.gene31185:CDS
GCTGAAGGCGAAACTGGGAT+TGG 0.488397 2.1:+7290149 None:intergenic
GTCAAAGGGTGAACTGTCAC+TGG 0.496842 2.1:+7291519 None:intergenic
CCAACGCGAACTGGAAAATC+GGG 0.498715 2.1:+7288437 None:intergenic
AATCAAGATCTTCATATGCA+TGG 0.500359 2.1:-7290491 MS.gene31185:CDS
AGAGCAAGAGATGTCAGATC+AGG 0.506012 2.1:+7290007 None:intergenic
CCAAGCAGACCAAATGGATC+AGG 0.506331 2.1:+7290058 None:intergenic
CAAGTCGTCCTAGTTCTGCT+GGG 0.507862 2.1:-7291474 MS.gene31185:CDS
CTATGGGAAACATGGTTGCT+GGG 0.508419 2.1:-7292242 MS.gene31185:CDS
TCCCATGATCCCTAAAGGAC+TGG 0.510903 2.1:+7290110 None:intergenic
AACATTGGGAGGCTAAGCTC+TGG 0.510948 2.1:-7292216 MS.gene31185:CDS
CCAACGCGAACAGGAAAATC+GGG 0.511117 2.1:+7288480 None:intergenic
CCACTAGAAAGACTTGATGT+AGG 0.511491 2.1:+7292659 None:intergenic
GAATGTCTCACGTGTAGAGC+AGG 0.512959 2.1:+7289842 None:intergenic
AGAGGCCTTAATCCAATGCC+AGG 0.516836 2.1:+7290244 None:intergenic
CTCTCAGTTACAAACGAGGT+TGG 0.517466 2.1:-7289274 MS.gene31185:intron
TCATATTTGCAGCTATCTCA+TGG 0.519422 2.1:-7292468 MS.gene31185:intron
AACAGCGGATCTGGTGGCTT+AGG 0.522109 2.1:-7292147 MS.gene31185:CDS
GAAGGAGAATGCTGCTGTTG+AGG 0.523767 2.1:+7290551 None:intergenic
GTTTAGACTAGCGGACCTCC+TGG 0.528923 2.1:-7290262 MS.gene31185:intron
TCTTCCTTCTGCTCTGTCAC+AGG 0.529243 2.1:-7292618 MS.gene31185:intron
CATTTGCTGAAGGCGAAACT+GGG 0.529768 2.1:+7290144 None:intergenic
ACCAGTCCTTTAGGGATCAT+GGG 0.532465 2.1:-7290111 MS.gene31185:CDS
AAAACAAGCACATACGAAAG+AGG 0.534593 2.1:-7289191 MS.gene31185:CDS
CTTCATCCCATGATCCCTAA+AGG 0.536490 2.1:+7290105 None:intergenic
CAAGCACTTTCGAAACTGTC+CGG 0.537041 2.1:-7289148 MS.gene31185:CDS
GGGAAGTCATTGAGGTCAAA+GGG 0.537865 2.1:+7291505 None:intergenic
ACGTGAAGCAAGCCCAGGAA+TGG 0.540879 2.1:+7292185 None:intergenic
TTTGACAAGCGGCTCCATGT+TGG 0.541017 2.1:+7289211 None:intergenic
TACACAGTACCTTTGTATCC+GGG 0.542891 2.1:+7291269 None:intergenic
GGAATCGATCTTACAACACT+CGG 0.543662 2.1:-7289983 MS.gene31185:CDS
AACTCTGGATCACCCTTAGC+TGG 0.543836 2.1:+7289899 None:intergenic
AGGGAAGTCATTGAGGTCAA+AGG 0.547739 2.1:+7291504 None:intergenic
ATCAAGATCTTCATATGCAT+GGG 0.548749 2.1:-7290490 MS.gene31185:CDS
TATTCTTTCTGCAGATGGGG+AGG 0.548953 2.1:-7290616 MS.gene31185:intron
AAAGTTATCTTAATGTTGAG+AGG 0.549263 2.1:-7288641 MS.gene31185:CDS
CATTGAAGCACACTAAACTC+TGG 0.549441 2.1:+7289884 None:intergenic
TCTGCTGGTTTCAGTTTGGG+AGG 0.553029 2.1:-7290593 MS.gene31185:CDS
TTAGCTGGTTCCTCAGACCA+AGG 0.553506 2.1:+7289914 None:intergenic
AAACTCTACGTATCATTCAC+AGG 0.554744 2.1:-7290447 MS.gene31185:intron
TTTAGACGTGAAGCAAGCCC+AGG 0.557274 2.1:+7292180 None:intergenic
TCTGGTGGCTTAGGCGTGCA+AGG 0.564669 2.1:-7292138 MS.gene31185:CDS
GAAGACTTTCCAGCTTTACC+CGG 0.566230 2.1:-7291287 MS.gene31185:CDS
TATGGGAAACATGGTTGCTG+GGG 0.570932 2.1:-7292241 MS.gene31185:CDS
AAGTCGTCCTAGTTCTGCTG+GGG 0.573436 2.1:-7291473 MS.gene31185:CDS
ATGGGAAACATGGTTGCTGG+GGG 0.575821 2.1:-7292240 MS.gene31185:CDS
CACTTTCGAAACTGTCCGGA+GGG 0.577137 2.1:-7289144 MS.gene31185:intron
TTAGCTGAGGGAAGTCATTG+AGG 0.578044 2.1:+7291497 None:intergenic
GAAAGTGGACCTCCAGCACT+GGG 0.582125 2.1:+7291604 None:intergenic
AACAAGTTCTATGGGAAACA+TGG 0.587430 2.1:-7292250 MS.gene31185:CDS
ACCTGCATTTCCCAAAATTG+GGG 0.588453 2.1:+7292281 None:intergenic
CACGCACCCAACTGTCCTTG+AGG 0.588710 2.1:+7291448 None:intergenic
CCGCGGATAACAAGTTCTAT+GGG 0.590377 2.1:-7292258 MS.gene31185:CDS
GGTTGTTGAACCGCTCCAGT+TGG 0.590721 2.1:+7292680 None:intergenic
ATTGGGAGGCTAAGCTCTGG+AGG 0.591058 2.1:-7292213 MS.gene31185:CDS
CCCATAGAACTTGTTATCCG+CGG 0.600667 2.1:+7292258 None:intergenic
TCGGGTGTTCCATAGTCTTG+TGG 0.600726 2.1:+7288498 None:intergenic
AATTCTTATCCCAGTGCTGG+AGG 0.601555 2.1:-7291613 MS.gene31185:CDS
CCAGCTTTACCCGGATACAA+AGG 0.603206 2.1:-7291278 MS.gene31185:intron
TGGTCTGAGGAACCAGCTAA+GGG 0.603363 2.1:-7289911 MS.gene31185:CDS
GAATCGATCTTACAACACTC+GGG 0.607310 2.1:-7289982 MS.gene31185:CDS
AGTCGTCCTAGTTCTGCTGG+GGG 0.608355 2.1:-7291472 MS.gene31185:CDS
TCAGGAGTCAACAGTAGAGG+AGG 0.608682 2.1:-7292429 MS.gene31185:intron
CCTAACATTGAAATTACCTG+AGG 0.611277 2.1:+7291637 None:intergenic
CTCACGTGTAGAGCAGGAGG+TGG 0.612457 2.1:+7289848 None:intergenic
TTACAGCTGACATTTGCTGA+AGG 0.613808 2.1:+7290134 None:intergenic
AATGGAAACAGCGGATCTGG+TGG 0.615708 2.1:-7292153 MS.gene31185:CDS
CATTCAGGAGTCAACAGTAG+AGG 0.618435 2.1:-7292432 MS.gene31185:CDS
ACGCCGCTGTTACTGACAGA+AGG 0.622596 2.1:+7290533 None:intergenic
AAATAACATGCCAACTGGAG+CGG 0.626036 2.1:-7292690 None:intergenic
ATGAGTGGCGTGCTTCCACA+AGG 0.629918 2.1:-7292102 MS.gene31185:intron
CTAGGACGACTTGTTAGCTG+AGG 0.634920 2.1:+7291484 None:intergenic
TGTACCTGTGACAGAGCAGA+AGG 0.635690 2.1:+7292614 None:intergenic
CCTACATCAAGTCTTTCTAG+TGG 0.642177 2.1:-7292659 MS.gene31185:CDS
TCTCCTTCTGTCAGTAACAG+CGG 0.645378 2.1:-7290536 MS.gene31185:CDS
GTATATAAAAGTTCCCAACA+TGG 0.647657 2.1:-7289225 MS.gene31185:CDS
TGATACGTAGAGTTTGAAGA+CGG 0.649131 2.1:+7290455 None:intergenic
TCAGGCTCTTTACGAAAACA+GGG 0.653371 2.1:-7291356 MS.gene31185:intron
TGTCTCACGTGTAGAGCAGG+AGG 0.654072 2.1:+7289845 None:intergenic
GTCGTCCTAGTTCTGCTGGG+GGG 0.662242 2.1:-7291471 MS.gene31185:CDS
GGACAAAATCGATTGATGAG+TGG 0.665922 2.1:-7292117 MS.gene31185:CDS
ATCACAAAGAGCATCGCATG+TGG 0.668075 2.1:-7289247 MS.gene31185:CDS
GCACTTTCGAAACTGTCCGG+AGG 0.673166 2.1:-7289145 MS.gene31185:CDS
CTAAATTTAAATGGAAACAG+CGG 0.686707 2.1:-7292162 MS.gene31185:CDS
TAGGACGACTTGTTAGCTGA+GGG 0.692911 2.1:+7291485 None:intergenic
TGGGAAACATGGTTGCTGGG+GGG 0.692996 2.1:-7292239 MS.gene31185:CDS
GTTGCTCTCAGTTACAAACG+AGG 0.704716 2.1:-7289278 MS.gene31185:intron
TACATCACTTGAATTCTATG+GGG 0.705637 2.1:-7291561 MS.gene31185:CDS
GGCCTTAATCCAATGCCAGG+AGG 0.705806 2.1:+7290247 None:intergenic
TTGTGACTGCATCATTGACA+TGG 0.707974 2.1:+7290744 None:intergenic
AAGTGCTTGGATCAAAACAG+TGG 0.711615 2.1:+7289162 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATATCCAATTATATAT+AGG - chr2.1:7289074-7289093 MS.gene31185:intron 10.0%
!! ATAACAAAAAATAACAAAAA+AGG + chr2.1:7291561-7291580 None:intergenic 10.0%
!! TAACAAAAAATAACAAAAAA+GGG + chr2.1:7291560-7291579 None:intergenic 10.0%
!! TTTGTATATGATTAAAAATA+AGG + chr2.1:7291775-7291794 None:intergenic 10.0%
!!! TATATAATTGGATATTTTTT+AGG + chr2.1:7289073-7289092 None:intergenic 10.0%
!!! TGTATTATTTTCTTATTTTT+GGG - chr2.1:7289915-7289934 MS.gene31185:CDS 10.0%
!!! TTGTATTATTTTCTTATTTT+TGG - chr2.1:7289914-7289933 MS.gene31185:CDS 10.0%
!!! TTTTGTTATTTTTTGTTATT+TGG - chr2.1:7291562-7291581 MS.gene31185:CDS 10.0%
!! AAATATGATATATAGACAAA+TGG + chr2.1:7288615-7288634 None:intergenic 15.0%
!! AACTAAAAAGCAAAAAATAA+GGG + chr2.1:7291306-7291325 None:intergenic 15.0%
!! ATGAATATAATTTATCATGA+TGG - chr2.1:7292185-7292204 MS.gene31185:CDS 15.0%
!! TCAAAACAAATAAAAGAAAA+TGG + chr2.1:7290070-7290089 None:intergenic 15.0%
!! TCATCTATATTTGTTTAATT+TGG - chr2.1:7289360-7289379 MS.gene31185:intron 15.0%
!!! AGATAACTTTATTTTTGTAT+AGG + chr2.1:7292444-7292463 None:intergenic 15.0%
!!! GTATTATTTTCTTATTTTTG+GGG - chr2.1:7289916-7289935 MS.gene31185:CDS 15.0%
!!! TTATTTTTTGCTTTTTAGTT+GGG - chr2.1:7291306-7291325 MS.gene31185:CDS 15.0%
!!! TTTTACGTATAATTTATCTA+GGG - chr2.1:7289182-7289201 MS.gene31185:CDS 15.0%
!! ACAAATATAGATGAATTTCT+AGG + chr2.1:7289354-7289373 None:intergenic 20.0%
!! ATAAAAAGATTTACACTGAA+GGG + chr2.1:7292163-7292182 None:intergenic 20.0%
!! ATAAGTAAAAAATTTCAGAG+TGG + chr2.1:7291709-7291728 None:intergenic 20.0%
!! ATAATCTAAGGAAAATAACA+TGG + chr2.1:7292515-7292534 None:intergenic 20.0%
!! ATATAACTACAATTCACATT+TGG + chr2.1:7292325-7292344 None:intergenic 20.0%
!! ATTGTAGTTATATTAGTAGA+CGG - chr2.1:7292332-7292351 MS.gene31185:intron 20.0%
!! CAACTAAAAAGCAAAAAATA+AGG + chr2.1:7291307-7291326 None:intergenic 20.0%
!! GAAGATAACCTATATATAAT+TGG + chr2.1:7289085-7289104 None:intergenic 20.0%
!! GTCAAAATATTTCGAATTTA+AGG + chr2.1:7291748-7291767 None:intergenic 20.0%
!! TAATCTAAGGAAAATAACAT+GGG + chr2.1:7292514-7292533 None:intergenic 20.0%
!! TAATGTAATCTATACATTTC+AGG - chr2.1:7289721-7289740 MS.gene31185:CDS 20.0%
!! TAATTTATCTAGGGATATAT+AGG - chr2.1:7289191-7289210 MS.gene31185:CDS 20.0%
!! TATAACTACAATTCACATTT+GGG + chr2.1:7292324-7292343 None:intergenic 20.0%
!! TTATGATAATATTTGTACAC+AGG - chr2.1:7290272-7290291 MS.gene31185:intron 20.0%
!! TTTCATTATTGAATCTTTGA+TGG - chr2.1:7290210-7290229 MS.gene31185:CDS 20.0%
!!! ACATTATTCTTTTTTGTTGA+AGG + chr2.1:7289707-7289726 None:intergenic 20.0%
!!! CTTATTTTTTGCTTTTTAGT+TGG - chr2.1:7291305-7291324 MS.gene31185:CDS 20.0%
!!! CTTTTACGTATAATTTATCT+AGG - chr2.1:7289181-7289200 MS.gene31185:CDS 20.0%
!!! TTATTTTTGGGGTTATAAAA+GGG - chr2.1:7289927-7289946 MS.gene31185:CDS 20.0%
!!! TTCTAATCGATTATGAATTT+TGG - chr2.1:7290811-7290830 MS.gene31185:intron 20.0%
!!! TTTCTTTTATTTGTTTTGAC+AGG - chr2.1:7290071-7290090 MS.gene31185:CDS 20.0%
!!! TTTTGTTTTTCAGTATGAAA+TGG - chr2.1:7292089-7292108 MS.gene31185:intron 20.0%
! AAAGTTATCTTAATGTTGAG+AGG - chr2.1:7292454-7292473 MS.gene31185:CDS 25.0%
! AAATACATTAAACTATGCAC+CGG + chr2.1:7288592-7288611 None:intergenic 25.0%
! ACACTAGTGCTTATATAAAA+TGG + chr2.1:7292214-7292233 None:intergenic 25.0%
! CATAAAAAGATTTACACTGA+AGG + chr2.1:7292164-7292183 None:intergenic 25.0%
! CTAAATTTAAATGGAAACAG+CGG - chr2.1:7288933-7288952 MS.gene31185:intron 25.0%
! CTTTACTTATCTTGTTAACT+TGG - chr2.1:7289239-7289258 MS.gene31185:CDS 25.0%
! GGATTTAGTAATAACACAAA+TGG - chr2.1:7288711-7288730 MS.gene31185:intron 25.0%
! TAAAAAGATTTACACTGAAG+GGG + chr2.1:7292162-7292181 None:intergenic 25.0%
! TTGTAGTTATATTAGTAGAC+GGG - chr2.1:7292333-7292352 MS.gene31185:intron 25.0%
!! AAAACTTTTTATGTGATGTG+AGG - chr2.1:7290738-7290757 MS.gene31185:CDS 25.0%
!! AAAATCTTCACAAGACTTTT+GGG - chr2.1:7291155-7291174 MS.gene31185:intron 25.0%
!! TGAATAGGATTTGTTTCAAA+AGG + chr2.1:7291410-7291429 None:intergenic 25.0%
!! TGGTTTATTAAGTTGTTAGA+TGG - chr2.1:7291665-7291684 MS.gene31185:intron 25.0%
!! TGTTGTTGTTATATTATTGC+AGG - chr2.1:7292017-7292036 MS.gene31185:intron 25.0%
!! TTTGTGTTATTACTAAATCC+AGG + chr2.1:7288711-7288730 None:intergenic 25.0%
!! TTTTTACTTATTTATCCACG+TGG - chr2.1:7291718-7291737 MS.gene31185:intron 25.0%
!!! CGTTGTTTTACATATTTTAC+AGG - chr2.1:7291382-7291401 MS.gene31185:intron 25.0%
!!! CTTATTTTTGGGGTTATAAA+AGG - chr2.1:7289926-7289945 MS.gene31185:CDS 25.0%
!!! TTTGGTTTTCTTTCTTTCTT+TGG - chr2.1:7289378-7289397 MS.gene31185:intron 25.0%
AAAAAGCAAAAAATAAGGGC+AGG + chr2.1:7291302-7291321 None:intergenic 30.0%
AAAAGATTACCGACAAACTA+TGG - chr2.1:7291792-7291811 MS.gene31185:intron 30.0%
AAAAGCAAAAAATAAGGGCA+GGG + chr2.1:7291301-7291320 None:intergenic 30.0%
AATCAAGATCTTCATATGCA+TGG - chr2.1:7290604-7290623 MS.gene31185:CDS 30.0%
AATTCTCCAAATACTGTTTC+TGG - chr2.1:7290875-7290894 MS.gene31185:intron 30.0%
ACAACAACAACATATAACAG+AGG + chr2.1:7292006-7292025 None:intergenic 30.0%
ACAGTATTTGGAGAATTTAG+AGG + chr2.1:7290872-7290891 None:intergenic 30.0%
AGATCCTGAATCAAAATATG+AGG + chr2.1:7289438-7289457 None:intergenic 30.0%
AGTACATCACTTGAATTCTA+TGG - chr2.1:7289532-7289551 MS.gene31185:intron 30.0%
AGTTTATACTCTCTTCTTGA+AGG - chr2.1:7289953-7289972 MS.gene31185:CDS 30.0%
ATCAAGATCTTCATATGCAT+GGG - chr2.1:7290605-7290624 MS.gene31185:CDS 30.0%
ATCAGATAGTATCATGAACA+AGG + chr2.1:7290434-7290453 None:intergenic 30.0%
ATCATATTGTATGCAGTATC+TGG - chr2.1:7292411-7292430 MS.gene31185:intron 30.0%
CCATGTGTACTAATAATCTA+AGG + chr2.1:7292527-7292546 None:intergenic 30.0%
CCTTAGATTATTAGTACACA+TGG - chr2.1:7292524-7292543 MS.gene31185:intron 30.0%
GCAGGATAATTGTTCTATTT+AGG - chr2.1:7292035-7292054 MS.gene31185:intron 30.0%
GCTTCACGTCTAAATTTAAA+TGG - chr2.1:7288924-7288943 MS.gene31185:intron 30.0%
GTACATCACTTGAATTCTAT+GGG - chr2.1:7289533-7289552 MS.gene31185:intron 30.0%
GTATATAAAAGTTCCCAACA+TGG - chr2.1:7291870-7291889 MS.gene31185:intron 30.0%
GTCTTTCATTATCTTTCTAC+CGG - chr2.1:7288570-7288589 MS.gene31185:intron 30.0%
TACATCACTTGAATTCTATG+GGG - chr2.1:7289534-7289553 MS.gene31185:intron 30.0%
TATGCATAGTGAAAGTGAAT+AGG + chr2.1:7291425-7291444 None:intergenic 30.0%
TATTCTTGGATAACTGTTCA+TGG - chr2.1:7291599-7291618 MS.gene31185:CDS 30.0%
TGATAATATTTGTACACAGG+TGG - chr2.1:7290275-7290294 MS.gene31185:intron 30.0%
TGTTCTATTTAGGCTTCTAA+TGG - chr2.1:7292045-7292064 MS.gene31185:intron 30.0%
TTTGAGTATCTCAAGAGTAA+CGG - chr2.1:7288518-7288537 MS.gene31185:CDS 30.0%
! CATTTTGAATGCTAAACTCT+TGG + chr2.1:7289789-7289808 None:intergenic 30.0%
! CTTTTACTGTATGAAACTCA+CGG + chr2.1:7290384-7290403 None:intergenic 30.0%
! GAAAATCTTCACAAGACTTT+TGG - chr2.1:7291154-7291173 MS.gene31185:intron 30.0%
! GTATTTTGCGAAGTTTACTT+TGG - chr2.1:7291356-7291375 MS.gene31185:intron 30.0%
! TGTCATTAAGTTGTTCTTTC+TGG + chr2.1:7290328-7290347 None:intergenic 30.0%
!! ATCCATTTTATTTCCGTACT+TGG + chr2.1:7292488-7292507 None:intergenic 30.0%
!! TCCATTTTATTTCCGTACTT+GGG + chr2.1:7292487-7292506 None:intergenic 30.0%
!! TGGTAATGGAGAATTTACTA+TGG - chr2.1:7290295-7290314 MS.gene31185:intron 30.0%
!! TGTTTTTCAGTATGAAATGG+TGG - chr2.1:7292092-7292111 MS.gene31185:intron 30.0%
!!! CTTTCCTCATATTTTGATTC+AGG - chr2.1:7289431-7289450 MS.gene31185:intron 30.0%
!!! TAATGGACACATTTTTTTGC+AGG - chr2.1:7292062-7292081 MS.gene31185:intron 30.0%
!!! TCTTGGTTTTGTTGTACAAT+AGG + chr2.1:7289772-7289791 None:intergenic 30.0%
!!! TGAATTTTGGTTTAGACTAG+CGG - chr2.1:7290824-7290843 MS.gene31185:intron 30.0%
AAAACAAGCACATACGAAAG+AGG - chr2.1:7291904-7291923 MS.gene31185:intron 35.0%
AAACTCTACGTATCATTCAC+AGG - chr2.1:7290648-7290667 MS.gene31185:intron 35.0%
AACAAGTTCTATGGGAAACA+TGG - chr2.1:7288845-7288864 MS.gene31185:intron 35.0%
AATAACACAAATGGAGTTGC+TGG - chr2.1:7288720-7288739 MS.gene31185:intron 35.0%
AATGGTTCCTATTGTTGTAG+AGG - chr2.1:7290168-7290187 MS.gene31185:CDS 35.0%
ACAGTTATCCAAGAATAACC+CGG + chr2.1:7291596-7291615 None:intergenic 35.0%
ATACACAGTACCTTTGTATC+CGG + chr2.1:7289830-7289849 None:intergenic 35.0%
ATATAGCTGTGCTTCATCTT+TGG + chr2.1:7291502-7291521 None:intergenic 35.0%
ATCAACTCCTCTACAACAAT+AGG + chr2.1:7290178-7290197 None:intergenic 35.0%
ATCTGTATTCTTTCTGCAGA+TGG - chr2.1:7290474-7290493 MS.gene31185:CDS 35.0%
ATCTTCGCCAAATGTATGAA+AGG + chr2.1:7290143-7290162 None:intergenic 35.0%
ATTAGGTATGTTCAACAGAC+AGG + chr2.1:7292386-7292405 None:intergenic 35.0%
ATTTGGCGAAGATGCTTTAA+TGG - chr2.1:7290150-7290169 MS.gene31185:CDS 35.0%
CCTAACATTGAAATTACCTG+AGG + chr2.1:7289461-7289480 None:intergenic 35.0%
CCTCAGGTAATTTCAATGTT+AGG - chr2.1:7289458-7289477 MS.gene31185:intron 35.0%
CGACTTTCCTAATGTAAATG+TGG - chr2.1:7290675-7290694 MS.gene31185:intron 35.0%
CTACCAAAATACATACCTTG+TGG + chr2.1:7289011-7289030 None:intergenic 35.0%
CTCTTGAGATACTCAAACAA+AGG + chr2.1:7288515-7288534 None:intergenic 35.0%
GATAACTGTTCATGGATTCT+TGG - chr2.1:7291607-7291626 MS.gene31185:CDS 35.0%
GCGTTGGATATGATTTACTA+TGG - chr2.1:7292631-7292650 MS.gene31185:CDS 35.0%
TAGTTATATTAGTAGACGGG+AGG - chr2.1:7292336-7292355 MS.gene31185:intron 35.0%
TATAGCTGTGCTTCATCTTT+GGG + chr2.1:7291501-7291520 None:intergenic 35.0%
TATTTGTACACAGGTGGTAA+TGG - chr2.1:7290281-7290300 MS.gene31185:intron 35.0%
TCATATTTGCAGCTATCTCA+TGG - chr2.1:7288627-7288646 MS.gene31185:intron 35.0%
TCTGTATTCTTTCTGCAGAT+GGG - chr2.1:7290475-7290494 MS.gene31185:CDS 35.0%
TGAAAATAAGTAGCTGTGAG+TGG - chr2.1:7291645-7291664 MS.gene31185:CDS 35.0%
TGATACGTAGAGTTTGAAGA+CGG + chr2.1:7290643-7290662 None:intergenic 35.0%
TGTGTGACCTTTCATACATT+TGG - chr2.1:7290133-7290152 MS.gene31185:CDS 35.0%
TTACTTCCATGTCACCTTAA+TGG + chr2.1:7289042-7289061 None:intergenic 35.0%
! AACTTGCTTTGATGGGAATA+TGG + chr2.1:7290784-7290803 None:intergenic 35.0%
! ATAAGTGTTGTAGGAAATCC+TGG - chr2.1:7288690-7288709 MS.gene31185:intron 35.0%
! CTTCCACAAGGTATGTATTT+TGG - chr2.1:7289005-7289024 MS.gene31185:intron 35.0%
! GTAATAGGCAGCTTCAATTT+TGG + chr2.1:7292578-7292597 None:intergenic 35.0%
! TCTTTTATGTGATGCAGCAA+GGG - chr2.1:7291334-7291353 MS.gene31185:CDS 35.0%
! TTCTTTTATGTGATGCAGCA+AGG - chr2.1:7291333-7291352 MS.gene31185:CDS 35.0%
! TTGACAGCACATTTTTCGTT+AGG - chr2.1:7289875-7289894 MS.gene31185:CDS 35.0%
!! CCATTTTATTTCCGTACTTG+GGG + chr2.1:7292486-7292505 None:intergenic 35.0%
!! TCCAAATACTGTTTCTGGTA+CGG - chr2.1:7290880-7290899 MS.gene31185:intron 35.0%
!! TCTTGTTGACTTGAGTATCT+TGG - chr2.1:7289277-7289296 MS.gene31185:intron 35.0%
!! TTCCATAGTCTTGTGGTAAT+AGG + chr2.1:7292593-7292612 None:intergenic 35.0%
!! TTGGCTTGTTAAGTGTAATC+AGG - chr2.1:7291056-7291075 MS.gene31185:intron 35.0%
!! TTGTTATTTGGCCTTGTTTC+CGG - chr2.1:7291574-7291593 MS.gene31185:CDS 35.0%
!!! AGGACTACACTCTTTTTTCA+CGG - chr2.1:7289211-7289230 MS.gene31185:CDS 35.0%
!!! TATGTGCTTGTTTTGACAAG+CGG + chr2.1:7291898-7291917 None:intergenic 35.0%
!!! TGTGAGGTTTTGTTTTGAAC+TGG - chr2.1:7290754-7290773 MS.gene31185:CDS 35.0%
AAATCATATCCAACGCGAAC+AGG + chr2.1:7292627-7292646 None:intergenic 40.0%
AAATCATATCCAACGCGAAC+TGG + chr2.1:7292627-7292646 None:intergenic 40.0%
AAGTGCTTGGATCAAAACAG+TGG + chr2.1:7291936-7291955 None:intergenic 40.0%
ACAAGTCCATTAAGGTGACA+TGG - chr2.1:7289033-7289052 MS.gene31185:intron 40.0%
ACCTGCATTTCCCAAAATTG+GGG + chr2.1:7288817-7288836 None:intergenic 40.0%
AGCTGTAAACCAGTCCTTTA+GGG - chr2.1:7290976-7290995 MS.gene31185:intron 40.0%
AGGAATAGAACAGCTAGGTT+AGG + chr2.1:7292366-7292385 None:intergenic 40.0%
AGTGATGTACTGCTTGCATA+TGG + chr2.1:7289523-7289542 None:intergenic 40.0%
ATATAACAGAGGAGTGAGAG+TGG + chr2.1:7291995-7292014 None:intergenic 40.0%
CATTGAAGCACACTAAACTC+TGG + chr2.1:7291214-7291233 None:intergenic 40.0%
CCACTAGAAAGACTTGATGT+AGG + chr2.1:7288439-7288458 None:intergenic 40.0%
CCCCAAGTACGGAAATAAAA+TGG - chr2.1:7292483-7292502 MS.gene31185:intron 40.0%
CCTACATCAAGTCTTTCTAG+TGG - chr2.1:7288436-7288455 MS.gene31185:CDS 40.0%
CGAATTTAAGGATAACCACG+TGG + chr2.1:7291736-7291755 None:intergenic 40.0%
CTGTATTCTTTCTGCAGATG+GGG - chr2.1:7290476-7290495 MS.gene31185:CDS 40.0%
GAATCGATCTTACAACACTC+GGG - chr2.1:7291113-7291132 MS.gene31185:intron 40.0%
GACCTGCATTTCCCAAAATT+GGG + chr2.1:7288818-7288837 None:intergenic 40.0%
GCAAGTGCCACATTTACATT+AGG + chr2.1:7290685-7290704 None:intergenic 40.0%
GGAATCGATCTTACAACACT+CGG - chr2.1:7291112-7291131 MS.gene31185:intron 40.0%
GGACAAAATCGATTGATGAG+TGG - chr2.1:7288978-7288997 MS.gene31185:intron 40.0%
TACACAGTACCTTTGTATCC+GGG + chr2.1:7289829-7289848 None:intergenic 40.0%
TCAGGCTCTTTACGAAAACA+GGG - chr2.1:7289739-7289758 MS.gene31185:CDS 40.0%
TGCCTATTACCACAAGACTA+TGG - chr2.1:7292588-7292607 MS.gene31185:intron 40.0%
TGGTAGTCACAAGTCCATTA+AGG - chr2.1:7289025-7289044 MS.gene31185:intron 40.0%
TTAAATGGAAACAGCGGATC+TGG - chr2.1:7288939-7288958 MS.gene31185:intron 40.0%
TTACCAATTGCAGCAGAAGA+TGG + chr2.1:7288765-7288784 None:intergenic 40.0%
TTCAGGCTCTTTACGAAAAC+AGG - chr2.1:7289738-7289757 MS.gene31185:CDS 40.0%
TTGTGACTGCATCATTGACA+TGG + chr2.1:7290354-7290373 None:intergenic 40.0%
! ACGTCAGAAACTTGCTTTGA+TGG + chr2.1:7290792-7290811 None:intergenic 40.0%
! AGAGGAGGTATAAGTGTTGT+AGG - chr2.1:7288681-7288700 MS.gene31185:intron 40.0%
! CGTCAGAAACTTGCTTTGAT+GGG + chr2.1:7290791-7290810 None:intergenic 40.0%
! CTCTCTTCTTGAAGGAGTTT+TGG - chr2.1:7289961-7289980 MS.gene31185:CDS 40.0%
! GAGCAACAACCATAGTTTGT+CGG + chr2.1:7291804-7291823 None:intergenic 40.0%
! TTACAGCTGACATTTGCTGA+AGG + chr2.1:7290964-7290983 None:intergenic 40.0%
! TTGTTGTGAGGTTAGTCAGT+TGG - chr2.1:7290234-7290253 MS.gene31185:CDS 40.0%
!! ATCTTTGATGGCTTGTTGTG+AGG - chr2.1:7290222-7290241 MS.gene31185:CDS 40.0%
!! CCAAATACTGTTTCTGGTAC+GGG - chr2.1:7290881-7290900 MS.gene31185:intron 40.0%
!! TGCATATGGCTTTGTGAAAG+TGG + chr2.1:7289509-7289528 None:intergenic 40.0%
!! TGCTGGATGAGTTGATCATA+TGG + chr2.1:7290908-7290927 None:intergenic 40.0%
!! TGTTATTTGGCCTTGTTTCC+GGG - chr2.1:7291575-7291594 MS.gene31185:CDS 40.0%
!! TTTTGATTCAGGATCTCCTC+AGG - chr2.1:7289442-7289461 MS.gene31185:intron 40.0%
!!! ATTGGGAGTATCCCCAATTT+TGG - chr2.1:7288803-7288822 MS.gene31185:intron 40.0%
!!! TTGGGAGTATCCCCAATTTT+GGG - chr2.1:7288804-7288823 MS.gene31185:intron 40.0%
AACAAGCCAAGCAGACCAAA+TGG + chr2.1:7291046-7291065 None:intergenic 45.0%
AGAGCAAGAGATGTCAGATC+AGG + chr2.1:7291091-7291110 None:intergenic 45.0%
AGAGGAATATGCCCCAAGTA+CGG - chr2.1:7292472-7292491 MS.gene31185:intron 45.0%
AGGGAAGTCATTGAGGTCAA+AGG + chr2.1:7289594-7289613 None:intergenic 45.0%
CAAGCACTTTCGAAACTGTC+CGG - chr2.1:7291947-7291966 MS.gene31185:intron 45.0%
CAATCTGCTCCTGATCCATT+TGG - chr2.1:7291028-7291047 MS.gene31185:intron 45.0%
CAGACAGGAATAGAACAGCT+AGG + chr2.1:7292371-7292390 None:intergenic 45.0%
CAGCTGTAAACCAGTCCTTT+AGG - chr2.1:7290975-7290994 MS.gene31185:intron 45.0%
CATTCAGGAGTCAACAGTAG+AGG - chr2.1:7288663-7288682 MS.gene31185:CDS 45.0%
CCAAGAATAACCCGGAAACA+AGG + chr2.1:7291588-7291607 None:intergenic 45.0%
CCAATCCTGGAACAGCATTA+CGG + chr2.1:7288788-7288807 None:intergenic 45.0%
CCCGTACCAGAAACAGTATT+TGG + chr2.1:7290884-7290903 None:intergenic 45.0%
CCGCGGATAACAAGTTCTAT+GGG - chr2.1:7288837-7288856 MS.gene31185:intron 45.0%
CCTCAATGTTGTGGCAAAGA+CGG + chr2.1:7292126-7292145 None:intergenic 45.0%
CGTAATGCTGTTCCAGGATT+GGG - chr2.1:7288786-7288805 MS.gene31185:intron 45.0%
CTATCTCATGGAAGCTCTCA+TGG - chr2.1:7288639-7288658 MS.gene31185:CDS 45.0%
CTATCTGCTCCTCAATGTTG+TGG + chr2.1:7292135-7292154 None:intergenic 45.0%
CTATGGGAAACATGGTTGCT+GGG - chr2.1:7288853-7288872 MS.gene31185:intron 45.0%
CTCTCAGTTACAAACGAGGT+TGG - chr2.1:7291821-7291840 MS.gene31185:intron 45.0%
CTTCATCCCATGATCCCTAA+AGG + chr2.1:7290993-7291012 None:intergenic 45.0%
CTTCCATCTTCTGCTGCAAT+TGG - chr2.1:7288759-7288778 MS.gene31185:intron 45.0%
GAAGACTTTCCAGCTTTACC+CGG - chr2.1:7289808-7289827 MS.gene31185:intron 45.0%
GACAAGATAACAGCTCTCAG+TGG + chr2.1:7292300-7292319 None:intergenic 45.0%
GATCTGACATCTCTTGCTCT+TGG - chr2.1:7291091-7291110 MS.gene31185:intron 45.0%
GGAAATTCTTATCCCAGTGC+TGG - chr2.1:7289479-7289498 MS.gene31185:intron 45.0%
GGACCTGCATTTCCCAAAAT+TGG + chr2.1:7288819-7288838 None:intergenic 45.0%
GGGAAGTCATTGAGGTCAAA+GGG + chr2.1:7289593-7289612 None:intergenic 45.0%
GTTGCTCTCAGTTACAAACG+AGG - chr2.1:7291817-7291836 MS.gene31185:intron 45.0%
TATGGGAAACATGGTTGCTG+GGG - chr2.1:7288854-7288873 MS.gene31185:intron 45.0%
TATTCTTTCTGCAGATGGGG+AGG - chr2.1:7290479-7290498 MS.gene31185:CDS 45.0%
TCCAACGCGAACAGGAAAAT+CGG + chr2.1:7292619-7292638 None:intergenic 45.0%
TCCAACGCGAACTGGAAAAT+CGG + chr2.1:7292662-7292681 None:intergenic 45.0%
TCCGCGGATAACAAGTTCTA+TGG - chr2.1:7288836-7288855 MS.gene31185:intron 45.0%
TCTATGGGAAACATGGTTGC+TGG - chr2.1:7288852-7288871 MS.gene31185:intron 45.0%
TCTCCTTCTGTCAGTAACAG+CGG - chr2.1:7290559-7290578 MS.gene31185:CDS 45.0%
TTAGCTGAGGGAAGTCATTG+AGG + chr2.1:7289601-7289620 None:intergenic 45.0%
! AACCAGTCCTTTAGGGATCA+TGG - chr2.1:7290983-7291002 MS.gene31185:intron 45.0%
! AATTCTTATCCCAGTGCTGG+AGG - chr2.1:7289482-7289501 MS.gene31185:intron 45.0%
! ACATTTGCTGAAGGCGAAAC+TGG + chr2.1:7290955-7290974 None:intergenic 45.0%
! ACCAGTCCTTTAGGGATCAT+GGG - chr2.1:7290984-7291003 MS.gene31185:intron 45.0%
! CATTTGCTGAAGGCGAAACT+GGG + chr2.1:7290954-7290973 None:intergenic 45.0%
! CCTTGTTTCCGGGTTATTCT+TGG - chr2.1:7291585-7291604 MS.gene31185:CDS 45.0%
! TGAGGTTAGTCAGTTGGCTT+TGG - chr2.1:7290240-7290259 MS.gene31185:CDS 45.0%
!! ACAAGACTTTTGGGTCTCCT+TGG - chr2.1:7291164-7291183 MS.gene31185:intron 45.0%
!! AGGTCTGCTGGTTTCAGTTT+GGG - chr2.1:7290499-7290518 MS.gene31185:CDS 45.0%
!! ATCACAAAGAGCATCGCATG+TGG - chr2.1:7291848-7291867 MS.gene31185:intron 45.0%
!! CCCATAGAACTTGTTATCCG+CGG + chr2.1:7288840-7288859 None:intergenic 45.0%
!! TAGGACGACTTGTTAGCTGA+GGG + chr2.1:7289613-7289632 None:intergenic 45.0%
!! TCCCCAATTTTGGGAAATGC+AGG - chr2.1:7288813-7288832 MS.gene31185:intron 45.0%
!! TCTGGTGTTGTTGATACTGC+TGG + chr2.1:7290925-7290944 None:intergenic 45.0%
AACATTGGGAGGCTAAGCTC+TGG - chr2.1:7288879-7288898 MS.gene31185:intron 50.0%
AACTCTGGATCACCCTTAGC+TGG + chr2.1:7291199-7291218 None:intergenic 50.0%
AATGGAAACAGCGGATCTGG+TGG - chr2.1:7288942-7288961 MS.gene31185:intron 50.0%
AGAGGCCTTAATCCAATGCC+AGG + chr2.1:7290854-7290873 None:intergenic 50.0%
ATGGGAAACATGGTTGCTGG+GGG - chr2.1:7288855-7288874 MS.gene31185:intron 50.0%
ATTGGGGATACTCCCAATCC+TGG + chr2.1:7288801-7288820 None:intergenic 50.0%
CACTTTCGAAACTGTCCGGA+GGG - chr2.1:7291951-7291970 MS.gene31185:intron 50.0%
CCAACGCGAACAGGAAAATC+GGG + chr2.1:7292618-7292637 None:intergenic 50.0%
CCAACGCGAACTGGAAAATC+GGG + chr2.1:7292661-7292680 None:intergenic 50.0%
CCAAGCAGACCAAATGGATC+AGG + chr2.1:7291040-7291059 None:intergenic 50.0%
CCAGCTTTACCCGGATACAA+AGG - chr2.1:7289817-7289836 MS.gene31185:intron 50.0%
CCGTAATGCTGTTCCAGGAT+TGG - chr2.1:7288785-7288804 MS.gene31185:intron 50.0%
CCGTCTTTGCCACAACATTG+AGG - chr2.1:7292123-7292142 MS.gene31185:CDS 50.0%
CCTGATCCATTTGGTCTGCT+TGG - chr2.1:7291037-7291056 MS.gene31185:intron 50.0%
CCTTTGTATCCGGGTAAAGC+TGG + chr2.1:7289820-7289839 None:intergenic 50.0%
CTGGAGGATTGTCCATTCCT+GGG - chr2.1:7288898-7288917 MS.gene31185:intron 50.0%
GAAGGAGAATGCTGCTGTTG+AGG + chr2.1:7290547-7290566 None:intergenic 50.0%
GAATGTCTCACGTGTAGAGC+AGG + chr2.1:7291256-7291275 None:intergenic 50.0%
GCAGAAGATGGAAGAATCCC+AGG + chr2.1:7288753-7288772 None:intergenic 50.0%
GCTCTACACGTGAGACATTC+TGG - chr2.1:7291256-7291275 MS.gene31185:intron 50.0%
GGAAGCTCTCATGGACATTC+AGG - chr2.1:7288648-7288667 MS.gene31185:CDS 50.0%
GGTAACCGTAATGCTGTTCC+AGG - chr2.1:7288780-7288799 MS.gene31185:intron 50.0%
GTCAAAGGGTGAACTGTCAC+TGG + chr2.1:7289579-7289598 None:intergenic 50.0%
GTTCACAGAAACTCACCCTC+CGG + chr2.1:7291969-7291988 None:intergenic 50.0%
TCAGGAGTCAACAGTAGAGG+AGG - chr2.1:7288666-7288685 MS.gene31185:CDS 50.0%
TCCCATGATCCCTAAAGGAC+TGG + chr2.1:7290988-7291007 None:intergenic 50.0%
TCTGGAGGATTGTCCATTCC+TGG - chr2.1:7288897-7288916 MS.gene31185:intron 50.0%
TCTTCCTTCTGCTCTGTCAC+AGG - chr2.1:7288477-7288496 MS.gene31185:CDS 50.0%
TGGTCTGAGGAACCAGCTAA+GGG - chr2.1:7291184-7291203 MS.gene31185:intron 50.0%
TGTACCTGTGACAGAGCAGA+AGG + chr2.1:7288484-7288503 None:intergenic 50.0%
TTGACAAGCGGCTCCATGTT+GGG + chr2.1:7291886-7291905 None:intergenic 50.0%
TTGGTCTGAGGAACCAGCTA+AGG - chr2.1:7291183-7291202 MS.gene31185:intron 50.0%
TTTAGACGTGAAGCAAGCCC+AGG + chr2.1:7288918-7288937 None:intergenic 50.0%
TTTGACAAGCGGCTCCATGT+TGG + chr2.1:7291887-7291906 None:intergenic 50.0%
! GACCTCCTGGCATTGGATTA+AGG - chr2.1:7290846-7290865 MS.gene31185:intron 50.0%
! TCGGGTGTTCCATAGTCTTG+TGG + chr2.1:7292600-7292619 None:intergenic 50.0%
! TTAGCTGGTTCCTCAGACCA+AGG + chr2.1:7291184-7291203 None:intergenic 50.0%
!! AAGTCGTCCTAGTTCTGCTG+GGG - chr2.1:7289622-7289641 MS.gene31185:intron 50.0%
!! ACAAGTCGTCCTAGTTCTGC+TGG - chr2.1:7289620-7289639 MS.gene31185:intron 50.0%
!! CAAGTCGTCCTAGTTCTGCT+GGG - chr2.1:7289621-7289640 MS.gene31185:intron 50.0%
!! CGGACAGTTTCGAAAGTGCT+TGG + chr2.1:7291949-7291968 None:intergenic 50.0%
!! CTAGGACGACTTGTTAGCTG+AGG + chr2.1:7289614-7289633 None:intergenic 50.0%
!! GAGGTCTGCTGGTTTCAGTT+TGG - chr2.1:7290498-7290517 MS.gene31185:CDS 50.0%
!! GAGTTGCTGGTTCGATTCCT+GGG - chr2.1:7288733-7288752 MS.gene31185:intron 50.0%
!! TCTGCTGGTTTCAGTTTGGG+AGG - chr2.1:7290502-7290521 MS.gene31185:CDS 50.0%
!! TTTTGGGAAATGCAGGTCCG+CGG - chr2.1:7288820-7288839 MS.gene31185:intron 50.0%
!! TTTTGGGTCTCCTTGGTCTG+AGG - chr2.1:7291171-7291190 MS.gene31185:intron 50.0%
AACAGCGGATCTGGTGGCTT+AGG - chr2.1:7288948-7288967 MS.gene31185:intron 55.0%
AAGGACAGTTGGGTGCGTGA+TGG - chr2.1:7289651-7289670 MS.gene31185:intron 55.0%
ACGCCGCTGTTACTGACAGA+AGG + chr2.1:7290565-7290584 None:intergenic 55.0%
ACGTGAAGCAAGCCCAGGAA+TGG + chr2.1:7288913-7288932 None:intergenic 55.0%
ATGAGTGGCGTGCTTCCACA+AGG - chr2.1:7288993-7289012 MS.gene31185:intron 55.0%
ATGGTTGCTGGGGGGAACAT+TGG - chr2.1:7288864-7288883 MS.gene31185:intron 55.0%
GAAAGTGGACCTCCAGCACT+GGG + chr2.1:7289494-7289513 None:intergenic 55.0%
GCACTTTCGAAACTGTCCGG+AGG - chr2.1:7291950-7291969 MS.gene31185:intron 55.0%
GCTGAAGGCGAAACTGGGAT+TGG + chr2.1:7290949-7290968 None:intergenic 55.0%
GGCCTTAATCCAATGCCAGG+AGG + chr2.1:7290851-7290870 None:intergenic 55.0%
GGTTGTTGAACCGCTCCAGT+TGG + chr2.1:7288418-7288437 None:intergenic 55.0%
TGAAAGTGGACCTCCAGCAC+TGG + chr2.1:7289495-7289514 None:intergenic 55.0%
TGGGAAACATGGTTGCTGGG+GGG - chr2.1:7288856-7288875 MS.gene31185:intron 55.0%
TGGTTGCTGGGGGGAACATT+GGG - chr2.1:7288865-7288884 MS.gene31185:intron 55.0%
TGTCTCACGTGTAGAGCAGG+AGG + chr2.1:7291253-7291272 None:intergenic 55.0%
! ATTGGGAGGCTAAGCTCTGG+AGG - chr2.1:7288882-7288901 MS.gene31185:intron 55.0%
! CCCGATTTTCCAGTTCGCGT+TGG - chr2.1:7292658-7292677 MS.gene31185:CDS 55.0%
! CCCGATTTTCCTGTTCGCGT+TGG - chr2.1:7292615-7292634 MS.gene31185:intron 55.0%
! GTTTAGACTAGCGGACCTCC+TGG - chr2.1:7290833-7290852 MS.gene31185:intron 55.0%
!! AGTCGTCCTAGTTCTGCTGG+GGG - chr2.1:7289623-7289642 MS.gene31185:intron 55.0%
!! GGAGTTGCTGGTTCGATTCC+TGG - chr2.1:7288732-7288751 MS.gene31185:intron 55.0%
!! GGCGAAACTGGGATTGGTTC+TGG + chr2.1:7290943-7290962 None:intergenic 55.0%
CACGCACCCAACTGTCCTTG+AGG + chr2.1:7289650-7289669 None:intergenic 60.0%
CTCACGTGTAGAGCAGGAGG+TGG + chr2.1:7291250-7291269 None:intergenic 60.0%
TCTGGTGGCTTAGGCGTGCA+AGG - chr2.1:7288957-7288976 MS.gene31185:intron 60.0%
TTGCTGGGGGGAACATTGGG+AGG - chr2.1:7288868-7288887 MS.gene31185:intron 60.0%
! ACTAGCGGACCTCCTGGCAT+TGG - chr2.1:7290839-7290858 MS.gene31185:intron 60.0%
!! GTCGTCCTAGTTCTGCTGGG+GGG - chr2.1:7289624-7289643 MS.gene31185:intron 60.0%
AGTTCTGCTGGGGGGCCTCA+AGG - chr2.1:7289632-7289651 MS.gene31185:intron 65.0%
CTGCAGATGGGGAGGTCTGC+TGG - chr2.1:7290487-7290506 MS.gene31185:CDS 65.0%
GGGGGGCCTCAAGGACAGTT+GGG - chr2.1:7289641-7289660 MS.gene31185:intron 65.0%
TGAGGCCCCCCAGCAGAACT+AGG + chr2.1:7289632-7289651 None:intergenic 65.0%
TGGGGGGCCTCAAGGACAGT+TGG - chr2.1:7289640-7289659 MS.gene31185:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 7288412 7292705 7288412 ID=MS.gene31185
chr2.1 mRNA 7288412 7292705 7288412 ID=MS.gene31185.t1;Parent=MS.gene31185
chr2.1 exon 7292619 7292705 7292619 ID=MS.gene31185.t1.exon1;Parent=MS.gene31185.t1
chr2.1 CDS 7292619 7292705 7292619 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7292430 7292478 7292430 ID=MS.gene31185.t1.exon2;Parent=MS.gene31185.t1
chr2.1 CDS 7292430 7292478 7292430 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7292103 7292315 7292103 ID=MS.gene31185.t1.exon3;Parent=MS.gene31185.t1
chr2.1 CDS 7292103 7292315 7292103 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7291455 7291664 7291455 ID=MS.gene31185.t1.exon4;Parent=MS.gene31185.t1
chr2.1 CDS 7291455 7291664 7291455 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7291279 7291374 7291279 ID=MS.gene31185.t1.exon5;Parent=MS.gene31185.t1
chr2.1 CDS 7291279 7291374 7291279 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7290735 7290823 7290735 ID=MS.gene31185.t1.exon6;Parent=MS.gene31185.t1
chr2.1 CDS 7290735 7290823 7290735 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7290448 7290624 7290448 ID=MS.gene31185.t1.exon7;Parent=MS.gene31185.t1
chr2.1 CDS 7290448 7290624 7290448 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7289853 7290278 7289853 ID=MS.gene31185.t1.exon8;Parent=MS.gene31185.t1
chr2.1 CDS 7289853 7290278 7289853 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7289714 7289766 7289714 ID=MS.gene31185.t1.exon9;Parent=MS.gene31185.t1
chr2.1 CDS 7289714 7289766 7289714 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7289582 7289623 7289582 ID=MS.gene31185.t1.exon10;Parent=MS.gene31185.t1
chr2.1 CDS 7289582 7289623 7289582 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7289145 7289289 7289145 ID=MS.gene31185.t1.exon11;Parent=MS.gene31185.t1
chr2.1 CDS 7289145 7289289 7289145 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7288629 7288690 7288629 ID=MS.gene31185.t1.exon12;Parent=MS.gene31185.t1
chr2.1 CDS 7288629 7288690 7288629 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
chr2.1 exon 7288412 7288547 7288412 ID=MS.gene31185.t1.exon13;Parent=MS.gene31185.t1
chr2.1 CDS 7288412 7288547 7288412 ID=cds.MS.gene31185.t1;Parent=MS.gene31185.t1
Gene Sequence

>MS.gene31185

ATGCCAACTGGAGCGGTTCAACAACCTACATCAAGTCTTTCTAGTGGAAGATTTACATCTAATAATCTTCCTTCTGCTCTGTCACAGGTACATGTGAATGCCTTTGTTTGAGTATCTCAAGAGTAACGGCTGAGCTATTGAACGTACTCAACTCTTCTGTCTTTCATTATCTTTCTACCGGTGCATAGTTTAATGTATTTCCATTTGTCTATATATCATATTTGCAGCTATCTCATGGAAGCTCTCATGGACATTCAGGAGTCAACAGTAGAGGAGGTATAAGTGTTGTAGGAAATCCTGGATTTAGTAATAACACAAATGGAGTTGCTGGTTCGATTCCTGGGATTCTTCCATCTTCTGCTGCAATTGGTAACCGTAATGCTGTTCCAGGATTGGGAGTATCCCCAATTTTGGGAAATGCAGGTCCGCGGATAACAAGTTCTATGGGAAACATGGTTGCTGGGGGGAACATTGGGAGGCTAAGCTCTGGAGGATTGTCCATTCCTGGGCTTGCTTCACGTCTAAATTTAAATGGAAACAGCGGATCTGGTGGCTTAGGCGTGCAAGGACAAAATCGATTGATGAGTGGCGTGCTTCCACAAGGTATGTATTTTGGTAGTCACAAGTCCATTAAGGTGACATGGAAGTAATATTTTCTCCTAAAAAATATCCAATTATATATAGGTTATCTTCATATGTTCAGTTGAGATCTCTTTCAAAAGAGTTAGAATTAGATATTAAAAGTGATGTAAACTCTTTTTATGTATTTCTTTTACGTATAATTTATCTAGGGATATATAGGACTACACTCTTTTTTCACGGATGATCTTTACTTATCTTGTTAACTTGGTTATCGCTTTTCATATCTTGTTGACTTGAGTATCTTGGATATAGTTTTCTTATTATGTACTTTGTTGCATTAGATGACATGTTTGAGTGCCTAGAAATTCATCTATATTTGTTTAATTTGGTTTTCTTTCTTTCTTTGGAATCTCATGAAGCTATGTTGTTGTACACTTCTTTCCTCATATTTTGATTCAGGATCTCCTCAGGTAATTTCAATGTTAGGAAATTCTTATCCCAGTGCTGGAGGTCCACTTTCACAAAGCCATATGCAAGCAGTACATCACTTGAATTCTATGGGGATGTTGAATGATTTGAATTCCAGTGACAGTTCACCCTTTGACCTCAATGACTTCCCTCAGCTAACAAGTCGTCCTAGTTCTGCTGGGGGGCCTCAAGGACAGTTGGGTGCGTGATGGAAAATGTTGTTTAGTTTAATATATTCTTCTCCTTCAACAAAAAAGAATAATGTAATCTATACATTTCAGGCTCTTTACGAAAACAGGGTCTTAGTCCTATTGTACAACAAAACCAAGAGTTTAGCATTCAAAATGAAGACTTTCCAGCTTTACCCGGATACAAAGGTACTGTGTATAACTTGAATGATCTTTGTGTGCTAATTGACAGCACATTTTTCGTTAGGAAATTATGCAGCTCAGTTGTATTATTTTCTTATTTTTGGGGTTATAAAAGGGTGAAGTTTATACTCTCTTCTTGAAGGAGTTTTGGATATTTGCTTATAAATCTGCTTTTTAGCTTCATTAAATTTTTTGCATATGCTTCATCGTGCATAATGTATCAGTGTTTTGTCTCCATTTTCTTTTATTTGTTTTGACAGGTATTATGACAGTTTCTTGCATTAGTTTTTTCTATATATTTGTGTGACCTTTCATACATTTGGCGAAGATGCTTTAATGGTTCCTATTGTTGTAGAGGAGTTGATGATTTATCATGTTTTCATTATTGAATCTTTGATGGCTTGTTGTGAGGTTAGTCAGTTGGCTTTGGCATTTGTTTTTATGATAATATTTGTACACAGGTGGTAATGGAGAATTTACTATGGATATGCACCAGAAAGAACAACTTAATGACAATACCATGTCAATGATGCAGTCACAACATTTCTCCGTGAGTTTCATACAGTAAAAGATTAAGATGTTGTGTTCTTAATCTTATCCTTGTTCATGATACTATCTGATCAAAATTTGTTCTCAATCTTATCTGTATTCTTTCTGCAGATGGGGAGGTCTGCTGGTTTCAGTTTGGGAGGATCTTATTCATCACATCGTCCTCAACAGCAGCATTCTCCTTCTGTCAGTAACAGCGGCGTCTCTTTTTCATCTATGAACAATCAAGATCTTCATATGCATGGGTCTGATGTTTTTCCGTCTTCAAACTCTACGTATCATTCACAGGTACACGACTTTCCTAATGTAAATGTGGCACTTGCTTTTGTGTTAGAATGTATTTTATTTTATTTTTTAAAACTTTTTATGTGATGTGAGGTTTTGTTTTGAACTGGAATTCCATATTCCCATCAAAGCAAGTTTCTGACGTTCTAATCGATTATGAATTTTGGTTTAGACTAGCGGACCTCCTGGCATTGGATTAAGGCCTCTAAATTCTCCAAATACTGTTTCTGGTACGGGTCCATATGATCAACTCATCCAGCAGTATCAACAACACCAGAACCAATCCCAGTTTCGCCTTCAGCAAATGTCAGCTGTAAACCAGTCCTTTAGGGATCATGGGATGAAGTCTATGCAAACTGCACAATCTGCTCCTGATCCATTTGGTCTGCTTGGCTTGTTAAGTGTAATCAGGATGAGTGATCCTGATCTGACATCTCTTGCTCTTGGAATCGATCTTACAACACTCGGGTTAAATTTGAATTCATCAGAAAATCTTCACAAGACTTTTGGGTCTCCTTGGTCTGAGGAACCAGCTAAGGGTGATCCAGAGTTTAGTGTGCTTCAATGTTATTATGCTAAACCACCTCCTGCTCTACACGTGAGACATTCTGGCTTTTGCTTTATATATTTTCCCTGCCCTTATTTTTTGCTTTTTAGTTGGGCTAATTCTTTTATGTGATGCAGCAAGGGTATTTTGCGAAGTTTACTTTGGAGACGTTGTTTTACATATTTTACAGGTGCCTTTTGAAACAAATCCTATTCACTTTCACTATGCATACTTGTTATTATAATATTAGTACTAAATTAAATATGATCTTTTATTTCAGCATGCCCAAAGATGAAGCACAGCTATATGCAGCAAATGAACTGTATGCATTCGATCACATATACCCTTTTTTGTTATTTTTTGTTATTTGGCCTTGTTTCCGGGTTATTCTTGGATAACTGTTCATGGATTCTTGGAAAAAGTTTTTAATTTGAAAATAAGTAGCTGTGAGTGGTTTATTAAGTTGTTAGATGGTTTTACTTTTAGCACATACCACTCTGAAATTTTTTACTTATTTATCCACGTGGTTATCCTTAAATTCGAAATATTTTGACTTATCCTTATTTTTAATCATATACAAAAGATTACCGACAAACTATGGTTGTTGCTCTCAGTTACAAACGAGGTTGGTTTTATCACAAAGAGCATCGCATGTGGTATATAAAAGTTCCCAACATGGAGCCGCTTGTCAAAACAAGCACATACGAAAGAGGATCTTACCACTGTTTTGATCCAAGCACTTTCGAAACTGTCCGGAGGGTGAGTTTCTGTGAACATACCACTCTCACTCCTCTGTTATATGTTGTTGTTGTTATATTATTGCAGGATAATTGTTCTATTTAGGCTTCTAATGGACACATTTTTTTGCAGGATAATTTTGTTTTTCAGTATGAAATGGTGGAAAAGAGACCGTCTTTGCCACAACATTGAGGAGCAGATAGAAAACCCCTTCAGTGTAAATCTTTTTATGCATGAATATAATTTATCATGATGGAAGCCATTTTATATAAGCACTAGTGTAACTTCAATTTGACAATTATTAGAGTATGAATATAATTATCTTAGATTTTACTAAATCTCGATCCACTGAGAGCTGTTATCTTGTCGCCCAAATGTGAATTGTAGTTATATTAGTAGACGGGAGGTTAACCTAACCTAGCTGTTCTATTCCTGTCTGTTGAACATACCTAATATATTATCATATTGTATGCAGTATCTGGTAGTTGACCTATACAAAAATAAAGTTATCTTAATGTTGAGAGGAATATGCCCCAAGTACGGAAATAAAATGGATTAGCCCATGTTATTTTCCTTAGATTATTAGTACACATGGTGAAAATGTAATGATTACACTAGTGCTACCAAAATTGAAGCTGCCTATTACCACAAGACTATGGAACACCCGATTTTCCTGTTCGCGTTGGATATGATTTACTATGGAACACCCGATTTTCCAGTTCGCGTTGGATATGATTTTCAATTCATGTCTTGA
Protein sequence

>MS.gene31185.t1

MPTGAVQQPTSSLSSGRFTSNNLPSALSQLSHGSSHGHSGVNSRGGLGVSPILGNAGPRITSSMGNMVAGGNIGRLSSGGLSIPGLASRLNLNGNSGSGGLGVQGQNRLMSGVLPQGSPQVISMLGNSYPSAGGPLSQSHMQAVHHLNSMGMLNDLNSSDSSPFDLNDFPQLTSRPSSAGGPQGQLGSLRKQGLSPIVQQNQEFSIQNEDFPALPGYKGGNGEFTMDMHQKEQLNDNTMSMMQSQHFSMGRSAGFSLGGSYSSHRPQQQHSPSVSNSGVSFSSMNNQDLHMHGSDVFPSSNSTYHSQTSGPPGIGLRPLNSPNTVSGTGPYDQLIQQYQQHQNQSQFRLQQMSAVNQSFRDHGMKSMQTAQSAPDPFGLLGLLSVIRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSEEPAKGDPEFSVLQCYYAKPPPALHQGYFAKFTLETLFYIFYSMPKDEAQLYAANELYKRGWFYHKEHRMWYIKVPNMEPLVKTSTYERGSYHCFDPSTFETVRRYLVVDLYKNKVILMLRGICPNATKIEAAYYHKTMEHPIFLFALDMIYYGTPDFPVRVGYDFQFMS