AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene31193

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31193.t1 MTR_2g039140 40.217 184 77 2 1 183 120 271 1.00e-31 123
MS.gene31193.t1 MTR_4g036430 89.744 39 4 0 1 39 31 69 2.25e-19 82.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene31193.t1 AT3G29785 57.778 90 37 1 11 100 7 95 7.62e-30 112

Find 113 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGATACCAACTGAACTTAAT+TGG 0.095422 2.1:-7429517 None:intergenic
GTGAGAACTACGATGATTTC+TGG 0.205326 2.1:-7429801 None:intergenic
ATCTCATCTGTGGGACTTCC+TGG 0.243179 2.1:-7431303 None:intergenic
TCATCATCCTTCATCGATTC+TGG 0.247368 2.1:-7429257 None:intergenic
CTAGAAGACCTTCTTAATTC+AGG 0.247761 2.1:-7431399 None:intergenic
TTCGCCTCTTGATTCTTTGC+TGG 0.253882 2.1:-7429890 None:intergenic
ACTACGATGATTTCTGGATT+TGG 0.314338 2.1:-7429795 None:intergenic
TTCTGCCAATTCCTCTGATT+GGG 0.327914 2.1:-7431328 None:intergenic
TGACGCGTTGATATGTTCTT+TGG 0.328692 2.1:+7429949 MS.gene31193:CDS
ATTCTGCCAATTCCTCTGAT+TGG 0.336830 2.1:-7431329 None:intergenic
CTTCAAGAAGCTGTTGTTTG+AGG 0.365200 2.1:+7433877 MS.gene31193:CDS
TCGCCTCTTGATTCTTTGCT+GGG 0.374564 2.1:-7429889 None:intergenic
ATGGTGCGGACTTTGGCTTT+TGG 0.377376 2.1:+7429171 MS.gene31193:CDS
AAGAACACCTTTCCCATTGA+AGG 0.381375 2.1:-7433832 None:intergenic
GATACCAACTGAACTTAATT+GGG 0.381678 2.1:-7429516 None:intergenic
ATTTCTGGATTTGGATCGTC+TGG 0.389287 2.1:-7429786 None:intergenic
CATGCTTCATCATAATCTTC+AGG 0.392057 2.1:-7431480 None:intergenic
GTAGAGATGGATGATGTTCC+AGG 0.394130 2.1:+7431285 MS.gene31193:CDS
GATTCCCCAATCAGAGGAAT+TGG 0.403290 2.1:+7431323 MS.gene31193:CDS
TGTCTTCCCTACCAGATAGT+TGG 0.404400 2.1:+7429573 MS.gene31193:CDS
GTAAACTTTACCAAGGTTAC+CGG 0.407938 2.1:-7430056 None:intergenic
GACCTTCTTAATTCAGGAAC+TGG 0.408428 2.1:-7431393 None:intergenic
ACAGTAGCGCTCCAACTATC+TGG 0.411128 2.1:-7429584 None:intergenic
TCATCCATCTCTACATAAAC+AGG 0.414467 2.1:-7431276 None:intergenic
AGAAATTCAACCAGAGGAAA+TGG 0.417568 2.1:+7429746 MS.gene31193:CDS
TGGAAATGAACAATCTTGTA+AGG 0.417574 2.1:+7430081 MS.gene31193:CDS
TCATAGATCCATCACTTCCT+AGG 0.420799 2.1:+7433685 MS.gene31193:CDS
TAGTTTATGTATCTGCTGTT+TGG 0.431465 2.1:-7431432 None:intergenic
ATTTGATGATGTTCGTGATC+TGG 0.433721 2.1:+7429646 MS.gene31193:CDS
TGGTGTTGACAAGCCTTCAA+TGG 0.435104 2.1:+7433819 MS.gene31193:intron
TGAACAATCTTGTAAGGTTG+TGG 0.438789 2.1:+7430087 MS.gene31193:CDS
GAGATCCGACGGAGAGAGTT+GGG 0.442215 2.1:+7429680 MS.gene31193:CDS
GCAAATGTTGCTTCCACCTC+AGG 0.445655 2.1:+7429920 MS.gene31193:CDS
GGAGAGCAAGGAAGAGTCTT+GGG 0.448480 2.1:+7429970 MS.gene31193:CDS
AAGTTCGATGGTGCGGACTT+TGG 0.452497 2.1:+7429164 MS.gene31193:CDS
AGGGAAAAGGTGAACTTAGT+TGG 0.453259 2.1:+7433705 MS.gene31193:CDS
TGAACTTTATTTGATGCTGA+AGG 0.474628 2.1:-7429410 None:intergenic
GGTGTTGACAAGCCTTCAAT+GGG 0.481081 2.1:+7433820 MS.gene31193:intron
TACAAGATTGTTCATTTCCA+AGG 0.487050 2.1:-7430078 None:intergenic
TTTACCACGTCCATTTCCTC+TGG 0.487326 2.1:-7429756 None:intergenic
AACCTTGGTAAAGTTTACCT+TGG 0.487612 2.1:+7430061 MS.gene31193:CDS
TCCATCACTTCCTAGGGAAA+AGG 0.492761 2.1:+7433692 MS.gene31193:CDS
TTGGTGTAGTTCTCTGTGCA+AGG 0.492858 2.1:+7433658 MS.gene31193:intron
CTTAATTCAGGAACTGGAGT+AGG 0.496648 2.1:-7431387 None:intergenic
GAACAATCTTGTAAGGTTGT+GGG 0.497160 2.1:+7430088 MS.gene31193:CDS
TGGAGAGCAAGGAAGAGTCT+TGG 0.501744 2.1:+7429969 MS.gene31193:CDS
TGAGGCGGTTGTTTACGCTT+CGG 0.506448 2.1:+7429438 MS.gene31193:CDS
ACGGCTGTGAGTAGCTCATC+GGG 0.509509 2.1:+7429608 MS.gene31193:CDS
AACTACATGTTGTTAACTGA+TGG 0.513907 2.1:+7431450 MS.gene31193:CDS
CGCGTCACCTCCTCCTGAGG+TGG 0.515832 2.1:-7429933 None:intergenic
GTGTTGGAACTGTGGAAAGA+TGG 0.515954 2.1:+7429841 MS.gene31193:CDS
GAGTCTTGGGTGTTAGACTC+TGG 0.518950 2.1:+7429983 MS.gene31193:CDS
AATTATGTCCCCGGTAACCT+TGG 0.523159 2.1:+7430046 MS.gene31193:CDS
CTCCAGTTCCTGAATTAAGA+AGG 0.530952 2.1:+7431391 MS.gene31193:CDS
TAAACTTTACCAAGGTTACC+GGG 0.530959 2.1:-7430055 None:intergenic
AACCACCGCTGGACTTATGA+AGG 0.535609 2.1:+7429364 MS.gene31193:CDS
TAGCGCTCCAACTATCTGGT+AGG 0.539026 2.1:-7429580 None:intergenic
AAAGAAACCAGAATCGATGA+AGG 0.539324 2.1:+7429250 MS.gene31193:CDS
GATTGGGGAATCTCATCTGT+GGG 0.541163 2.1:-7431312 None:intergenic
TGATTGGGGAATCTCATCTG+TGG 0.543207 2.1:-7431313 None:intergenic
ATCATCGATACAGCACTCAC+AGG 0.544075 2.1:+7433733 MS.gene31193:CDS
AGAGATCCGACGGAGAGAGT+TGG 0.549236 2.1:+7429679 MS.gene31193:CDS
CACGGCTGTGAGTAGCTCAT+CGG 0.549984 2.1:+7429607 MS.gene31193:CDS
CAAATAAAGTTCATTTGATG+AGG 0.550433 2.1:+7429420 MS.gene31193:CDS
TCTTGTAAGGTTGTGGGCAA+AGG 0.550702 2.1:+7430094 MS.gene31193:CDS
GGAACTGGAGTAGGATGCAC+TGG 0.552002 2.1:-7431378 None:intergenic
CATAGATCCATCACTTCCTA+GGG 0.555729 2.1:+7433686 MS.gene31193:CDS
GGAAGTGATGGATCTATGAC+AGG 0.558694 2.1:-7433681 None:intergenic
TTTACGCTTCGGATGACAGA+AGG 0.562705 2.1:+7429449 MS.gene31193:CDS
GTGAAAATTGAAAAGTTCGA+TGG 0.563926 2.1:+7429152 MS.gene31193:CDS
CTCTGTATGCAATACTGAAG+AGG 0.567853 2.1:-7429714 None:intergenic
ACAACCCAATTAAGTTCAGT+TGG 0.568124 2.1:+7429512 MS.gene31193:CDS
GTTGCTTCCACCTCAGGAGG+AGG 0.568689 2.1:+7429926 MS.gene31193:CDS
TCTGCCAATTCCTCTGATTG+GGG 0.571085 2.1:-7431327 None:intergenic
ACTCGAAATCTATCGAGTGT+TGG 0.576612 2.1:+7429825 MS.gene31193:CDS
TTCTTCAAGAATTATGTCCC+CGG 0.581954 2.1:+7430037 MS.gene31193:CDS
TGTTGGAACTGTGGAAAGAT+GGG 0.586945 2.1:+7429842 MS.gene31193:CDS
CTCCCACTTACTAGCATCCG+TGG 0.588137 2.1:-7431508 None:intergenic
TAGTTGGAGCGCTACTGTCA+CGG 0.591464 2.1:+7429589 MS.gene31193:CDS
AGCGCTCCAACTATCTGGTA+GGG 0.594325 2.1:-7429579 None:intergenic
AAATGGACGTGGTAAATCAA+AGG 0.596335 2.1:+7429763 MS.gene31193:CDS
TTCTCAGTGAAGAGATCCGA+CGG 0.596721 2.1:+7429669 MS.gene31193:CDS
GATATGTTCTTTGGAGAGCA+AGG 0.598084 2.1:+7429958 MS.gene31193:CDS
GATGACAGAAGGCGCGTCAG+TGG 0.598117 2.1:+7429460 MS.gene31193:CDS
ATAAAGTTCATTTGATGAGG+CGG 0.598437 2.1:+7429423 MS.gene31193:CDS
TGACAAGCCTTCAATGGGAA+AGG 0.599755 2.1:+7433825 MS.gene31193:intron
CTTCTCGATAGACAAGCACT+TGG 0.601850 2.1:+7429287 MS.gene31193:CDS
TCTATCGAGTGTTGGAACTG+TGG 0.601883 2.1:+7429833 MS.gene31193:CDS
CGAGCCTGTTTATGTAGAGA+TGG 0.602356 2.1:+7431272 MS.gene31193:CDS
AATGTTGCTTCCACCTCAGG+AGG 0.603928 2.1:+7429923 MS.gene31193:CDS
AATCGATGAAGGATGATGAG+TGG 0.606445 2.1:+7429261 MS.gene31193:CDS
GCAAAAGAGAAAACCACCGC+TGG 0.607234 2.1:+7429353 MS.gene31193:CDS
AATTGAAAAGTTCGATGGTG+CGG 0.608192 2.1:+7429157 MS.gene31193:CDS
CAAGTGCTTGTCTATCGAGA+AGG 0.612004 2.1:-7429286 None:intergenic
TATGGCTGCAGACGAAGGAA+AGG 0.614378 2.1:+7429130 None:intergenic
TTCCAAGGTAAACTTTACCA+AGG 0.615217 2.1:-7430063 None:intergenic
TACATGTTGTTAACTGATGG+AGG 0.616383 2.1:+7431453 MS.gene31193:CDS
ATTCACCCAACTCTCTCCGT+CGG 0.616565 2.1:-7429685 None:intergenic
GGAGTTATGGCTGCAGACGA+AGG 0.617375 2.1:+7429125 None:intergenic
AGCCTTCATAAGTCCAGCGG+TGG 0.623238 2.1:-7429366 None:intergenic
GAATCAAGAGGCGAAAGATG+AGG 0.623736 2.1:+7429898 MS.gene31193:CDS
TCATCGATACAGCACTCACA+GGG 0.624767 2.1:+7433734 MS.gene31193:CDS
AGATGAGATTCCCCAATCAG+AGG 0.627217 2.1:+7431317 MS.gene31193:CDS
CAACGCGTCACCTCCTCCTG+AGG 0.630580 2.1:-7429936 None:intergenic
TGGTATCGAATTTGACGATG+AGG 0.639552 2.1:+7429532 MS.gene31193:CDS
AGAGGAAGAAATTCAACCAG+AGG 0.643795 2.1:+7429740 MS.gene31193:CDS
TCAACCAGAGGAAATGGACG+TGG 0.665050 2.1:+7429752 MS.gene31193:CDS
GCTCCCAGCAAAGAATCAAG+AGG 0.671318 2.1:+7429886 MS.gene31193:CDS
GGATGCACTGGTGTGTCAGA+CGG 0.673844 2.1:-7431366 None:intergenic
GTATTGCATACAGAGTCAAG+AGG 0.682691 2.1:+7429722 MS.gene31193:CDS
TGATGAAGCATGTCAGACCA+CGG 0.691661 2.1:+7431491 MS.gene31193:CDS
AAACTTTACCAAGGTTACCG+GGG 0.698437 2.1:-7430054 None:intergenic
AAGAGCCTTCATAAGTCCAG+CGG 0.707222 2.1:-7429369 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACTGGTTATATATTTACTGT+TGG + chr2.1:7432623-7432642 MS.gene31193:intron 25.0%
! ATAGCAAAACTTCTTGAATT+TGG - chr2.1:7430776-7430795 None:intergenic 25.0%
! CAAATAAAGTTCATTTGATG+AGG + chr2.1:7429420-7429439 MS.gene31193:CDS 25.0%
! CAAATGAAAATCCTAATCTA+TGG + chr2.1:7430350-7430369 MS.gene31193:intron 25.0%
! CTAACATTGATCAAAATTCA+AGG + chr2.1:7432917-7432936 MS.gene31193:intron 25.0%
! GAAAAATGCTTGGTTTATTA+TGG + chr2.1:7433799-7433818 MS.gene31193:intron 25.0%
! TATATATTTACTGTTGGTAC+TGG + chr2.1:7432629-7432648 MS.gene31193:intron 25.0%
!! AATAATTGGTAGTAGGTAAT+TGG + chr2.1:7433270-7433289 MS.gene31193:intron 25.0%
!! GTTAAATGACCAAAAGTTTT+TGG + chr2.1:7433162-7433181 MS.gene31193:intron 25.0%
!!! AATTTTAGGAGAAAATTCCT+GGG + chr2.1:7433425-7433444 MS.gene31193:intron 25.0%
!!! ACTTTTGGTCATTTAACTTT+CGG - chr2.1:7433159-7433178 None:intergenic 25.0%
!!! GAAGTTAAGATTAAGTTGAA+TGG + chr2.1:7430118-7430137 MS.gene31193:intron 25.0%
AAAGAATTGATATGGCTTCA+AGG + chr2.1:7432737-7432756 MS.gene31193:intron 30.0%
AAAGGAGAGATAAAAGTAGA+AGG + chr2.1:7432551-7432570 MS.gene31193:intron 30.0%
AAATCAAAGCAGATTCTCTT+AGG + chr2.1:7433758-7433777 MS.gene31193:intron 30.0%
AAATGTTTGTACTTCAGCAA+AGG + chr2.1:7432533-7432552 MS.gene31193:intron 30.0%
AACTACATGTTGTTAACTGA+TGG + chr2.1:7431450-7431469 MS.gene31193:CDS 30.0%
AAGCTAGCAAAGAATTGATA+TGG + chr2.1:7432729-7432748 MS.gene31193:intron 30.0%
AAGTAGAAGTGGAATAAATG+CGG - chr2.1:7433590-7433609 None:intergenic 30.0%
ACAAGATTGTTAACGAAGTT+CGG - chr2.1:7433556-7433575 None:intergenic 30.0%
AGAAAAAGGGAAAGAGAATA+TGG + chr2.1:7431881-7431900 MS.gene31193:intron 30.0%
AGTTTGACATGAAGGATTTA+GGG + chr2.1:7432138-7432157 MS.gene31193:intron 30.0%
ATAAAATACCAGAAGAGGTA+TGG + chr2.1:7430992-7431011 MS.gene31193:intron 30.0%
ATAAAGTTCATTTGATGAGG+CGG + chr2.1:7429423-7429442 MS.gene31193:CDS 30.0%
ATATGTGAAGACTGTATACT+TGG + chr2.1:7430463-7430482 MS.gene31193:intron 30.0%
ATTGAAATCAGTCTTCAAGT+GGG + chr2.1:7433070-7433089 MS.gene31193:intron 30.0%
CAATACATGTTTGAAAAGCA+TGG + chr2.1:7433195-7433214 MS.gene31193:intron 30.0%
GATACCAACTGAACTTAATT+GGG - chr2.1:7429519-7429538 None:intergenic 30.0%
GATGATTGGAAGATTTCAAA+AGG + chr2.1:7430247-7430266 MS.gene31193:intron 30.0%
GGATGATGAAAACAAAAAGA+TGG + chr2.1:7431167-7431186 MS.gene31193:intron 30.0%
GTGAAAATTGAAAAGTTCGA+TGG + chr2.1:7429152-7429171 MS.gene31193:CDS 30.0%
TACAAGATTGTTCATTTCCA+AGG - chr2.1:7430081-7430100 None:intergenic 30.0%
TAGTTTATGTATCTGCTGTT+TGG - chr2.1:7431435-7431454 None:intergenic 30.0%
TATAACCAGTTGTACTTCTT+CGG - chr2.1:7432613-7432632 None:intergenic 30.0%
TATGTGCATATTAGTGATCA+AGG + chr2.1:7431066-7431085 MS.gene31193:intron 30.0%
TGGAAATGAACAATCTTGTA+AGG + chr2.1:7430081-7430100 MS.gene31193:CDS 30.0%
TGTTGAATCTTTGCAAAACA+CGG - chr2.1:7432247-7432266 None:intergenic 30.0%
TTGCAAGCAAGCTATTTATA+GGG - chr2.1:7433322-7433341 None:intergenic 30.0%
TTTGCAAGCAAGCTATTTAT+AGG - chr2.1:7433323-7433342 None:intergenic 30.0%
! AAACTCAGTGTGAGAATTTT+AGG + chr2.1:7433411-7433430 MS.gene31193:intron 30.0%
! AATTGTTGGTGAACATTGTT+GGG + chr2.1:7433219-7433238 MS.gene31193:intron 30.0%
! ACTTGAAGACTGATTTCAAT+CGG - chr2.1:7433070-7433089 None:intergenic 30.0%
! GCTGCAGATCTTTTTAATAA+AGG - chr2.1:7433506-7433525 None:intergenic 30.0%
! GTTCTGTGTTGTTATTACAA+TGG - chr2.1:7433346-7433365 None:intergenic 30.0%
! GTTTTGCAAAGATTCAACAT+GGG + chr2.1:7432248-7432267 MS.gene31193:intron 30.0%
! TAAGTTGAATGGTTCTGTAT+GGG + chr2.1:7430129-7430148 MS.gene31193:intron 30.0%
! TATTTGAAGCTTTCAAGAGA+TGG + chr2.1:7430674-7430693 MS.gene31193:intron 30.0%
! TGAACTTTATTTGATGCTGA+AGG - chr2.1:7429413-7429432 None:intergenic 30.0%
! TGCAATTGTTGGTGAATAAT+TGG + chr2.1:7433256-7433275 MS.gene31193:intron 30.0%
! TGTCAAATGCCAAAAACTTT+TGG - chr2.1:7433174-7433193 None:intergenic 30.0%
! TGTTTTGCAAAGATTCAACA+TGG + chr2.1:7432247-7432266 MS.gene31193:intron 30.0%
!! CTTTTATTGATGATCACTCT+AGG + chr2.1:7430614-7430633 MS.gene31193:intron 30.0%
!! GAATTTTAGGAGAAAATTCC+TGG + chr2.1:7433424-7433443 MS.gene31193:intron 30.0%
!! TTAAGTTGAATGGTTCTGTA+TGG + chr2.1:7430128-7430147 MS.gene31193:intron 30.0%
AAAGAAACCAGAATCGATGA+AGG + chr2.1:7429250-7429269 MS.gene31193:CDS 35.0%
AAAGAGTGATGTACAAAGAC+AGG + chr2.1:7431217-7431236 MS.gene31193:intron 35.0%
AAAGTGCACTTCTTGGATTT+GGG - chr2.1:7431108-7431127 None:intergenic 35.0%
AAATCCAGGTAAAGCTCATT+GGG + chr2.1:7432466-7432485 MS.gene31193:intron 35.0%
AAATGGACGTGGTAAATCAA+AGG + chr2.1:7429763-7429782 MS.gene31193:CDS 35.0%
AACCTTGGTAAAGTTTACCT+TGG + chr2.1:7430061-7430080 MS.gene31193:CDS 35.0%
AAGGAAAACTACCAAGTCTT+CGG + chr2.1:7430425-7430444 MS.gene31193:intron 35.0%
AATCTATGGCACAAGAGATT+AGG + chr2.1:7430364-7430383 MS.gene31193:intron 35.0%
AATCTCTTGTGCCATAGATT+AGG - chr2.1:7430364-7430383 None:intergenic 35.0%
AATTGAAAAGTTCGATGGTG+CGG + chr2.1:7429157-7429176 MS.gene31193:CDS 35.0%
ACAACCCAATTAAGTTCAGT+TGG + chr2.1:7429512-7429531 MS.gene31193:CDS 35.0%
ACCTTTGTTAACATATCTGC+GGG - chr2.1:7432953-7432972 None:intergenic 35.0%
ACGAAAAACTTAATCTCCGT+AGG + chr2.1:7430184-7430203 MS.gene31193:intron 35.0%
ACTTCTACTTAATCTGACCA+TGG + chr2.1:7433600-7433619 MS.gene31193:intron 35.0%
AGAAAATTCCTGGGTGTAAT+TGG + chr2.1:7433434-7433453 MS.gene31193:intron 35.0%
AGAAACTGCTGAAAAATGCT+TGG + chr2.1:7433789-7433808 MS.gene31193:intron 35.0%
AGAAATTCAACCAGAGGAAA+TGG + chr2.1:7429746-7429765 MS.gene31193:CDS 35.0%
AGACTTCATTTCGTCTTTCA+TGG - chr2.1:7431538-7431557 None:intergenic 35.0%
AGGTTAAAGAAGAGCTTGTA+TGG + chr2.1:7431909-7431928 MS.gene31193:intron 35.0%
ATCACGAGAGATAAGCAAAA+AGG + chr2.1:7432188-7432207 MS.gene31193:intron 35.0%
ATCTCTTGAAGAAGCAACAA+TGG - chr2.1:7432016-7432035 None:intergenic 35.0%
ATGAAGGTTATGCACTCAAA+AGG + chr2.1:7430406-7430425 MS.gene31193:intron 35.0%
ATGGTCAGATTAAGTAGAAG+TGG - chr2.1:7433601-7433620 None:intergenic 35.0%
ATTAGGCCATATGAGTGAAA+AGG + chr2.1:7430381-7430400 MS.gene31193:intron 35.0%
ATTCCATATGCTTCAGCAAT+TGG + chr2.1:7432368-7432387 MS.gene31193:intron 35.0%
ATTTCTATTGACCGAAGACT+TGG - chr2.1:7430439-7430458 None:intergenic 35.0%
CAACAATTGCACTATGTAGT+AGG - chr2.1:7433247-7433266 None:intergenic 35.0%
CAAGGATTGTTAACAGAGTT+AGG + chr2.1:7432755-7432774 MS.gene31193:intron 35.0%
CACCTTTGTTAACATATCTG+CGG - chr2.1:7432954-7432973 None:intergenic 35.0%
CAGAAGGATTCTCAGAAAAA+GGG + chr2.1:7431868-7431887 MS.gene31193:intron 35.0%
CATGCTTCATCATAATCTTC+AGG - chr2.1:7431483-7431502 None:intergenic 35.0%
CGATACCAACTGAACTTAAT+TGG - chr2.1:7429520-7429539 None:intergenic 35.0%
CTACTACATAGTGCAATTGT+TGG + chr2.1:7433245-7433264 MS.gene31193:intron 35.0%
CTAGAAGACCTTCTTAATTC+AGG - chr2.1:7431402-7431421 None:intergenic 35.0%
CTTCTACTTAATCTGACCAT+GGG + chr2.1:7433601-7433620 MS.gene31193:intron 35.0%
CTTGTTTACTCTGATGTTTG+GGG + chr2.1:7430547-7430566 MS.gene31193:intron 35.0%
GAAAATTCCTGGGTGTAATT+GGG + chr2.1:7433435-7433454 MS.gene31193:intron 35.0%
GAACAATCTTGTAAGGTTGT+GGG + chr2.1:7430088-7430107 MS.gene31193:CDS 35.0%
GAAGTACAAACATTTCTCTG+TGG - chr2.1:7432528-7432547 None:intergenic 35.0%
GAGTTTGACATGAAGGATTT+AGG + chr2.1:7432137-7432156 MS.gene31193:intron 35.0%
GATTGAAATCAGTCTTCAAG+TGG + chr2.1:7433069-7433088 MS.gene31193:intron 35.0%
GCTTGTTTACTCTGATGTTT+GGG + chr2.1:7430546-7430565 MS.gene31193:intron 35.0%
GTAAACTTTACCAAGGTTAC+CGG - chr2.1:7430059-7430078 None:intergenic 35.0%
GTCAAAAGAGTTTGACATGA+AGG + chr2.1:7432130-7432149 MS.gene31193:intron 35.0%
GTCACTTCAAAAATCAGTGT+AGG + chr2.1:7429864-7429883 MS.gene31193:CDS 35.0%
TAAACTTTACCAAGGTTACC+GGG - chr2.1:7430058-7430077 None:intergenic 35.0%
TACATGTTGTTAACTGATGG+AGG + chr2.1:7431453-7431472 MS.gene31193:CDS 35.0%
TCATCCATCTCTACATAAAC+AGG - chr2.1:7431279-7431298 None:intergenic 35.0%
TCTTCATGGAGACTTAAATG+AGG + chr2.1:7431827-7431846 MS.gene31193:intron 35.0%
TGAACAATCTTGTAAGGTTG+TGG + chr2.1:7430087-7430106 MS.gene31193:CDS 35.0%
TGCAAGCAAGCTATTTATAG+GGG - chr2.1:7433321-7433340 None:intergenic 35.0%
TTAGAATAAGAGACCAGAGA+AGG + chr2.1:7433019-7433038 MS.gene31193:intron 35.0%
TTAGGCCATATGAGTGAAAA+GGG + chr2.1:7430382-7430401 MS.gene31193:intron 35.0%
TTCATATTCACCACCATTGT+CGG - chr2.1:7430749-7430768 None:intergenic 35.0%
TTCCAAGGTAAACTTTACCA+AGG - chr2.1:7430066-7430085 None:intergenic 35.0%
TTCTACTTAATCTGACCATG+GGG + chr2.1:7433602-7433621 MS.gene31193:intron 35.0%
TTCTTCAAGAATTATGTCCC+CGG + chr2.1:7430037-7430056 MS.gene31193:CDS 35.0%
TTGTTGCAACTGCAATCAAA+TGG - chr2.1:7430333-7430352 None:intergenic 35.0%
TTTGATCTCCAATCAGACAT+GGG + chr2.1:7431557-7431576 MS.gene31193:intron 35.0%
! ACTACGATGATTTCTGGATT+TGG - chr2.1:7429798-7429817 None:intergenic 35.0%
! AGCTTGTTTACTCTGATGTT+TGG + chr2.1:7430545-7430564 MS.gene31193:intron 35.0%
! ATTAAGTTTTTCGTGAGGTC+GGG - chr2.1:7430178-7430197 None:intergenic 35.0%
! CAATTGTTGGTGAACATTGT+TGG + chr2.1:7433218-7433237 MS.gene31193:intron 35.0%
! CTCTCACATCTTAGAGTTTT+CGG + chr2.1:7431033-7431052 MS.gene31193:intron 35.0%
! GATTAAGTTTTTCGTGAGGT+CGG - chr2.1:7430179-7430198 None:intergenic 35.0%
! GTTGGTGAATAATTGGTAGT+AGG + chr2.1:7433263-7433282 MS.gene31193:intron 35.0%
! TATTGATGATCACTCTAGGA+AGG + chr2.1:7430618-7430637 MS.gene31193:intron 35.0%
! TCTGGTATTTTATGCTCCAA+TGG - chr2.1:7430985-7431004 None:intergenic 35.0%
! TTGAAAAGCATGGCAATTGT+TGG + chr2.1:7433205-7433224 MS.gene31193:intron 35.0%
!! AAGAAGTTTTGCTATGAGCA+CGG + chr2.1:7430781-7430800 MS.gene31193:intron 35.0%
!! AAGCGGTTAAATGGATTTTG+AGG + chr2.1:7432489-7432508 MS.gene31193:intron 35.0%
!! ATTTGATGATGTTCGTGATC+TGG + chr2.1:7429646-7429665 MS.gene31193:CDS 35.0%
!! GTTGATGATATGTTAGTAGC+AGG + chr2.1:7432068-7432087 MS.gene31193:intron 35.0%
!!! TGGATTTTGAGGTATCTAAG+AGG + chr2.1:7432500-7432519 MS.gene31193:intron 35.0%
!!! TTTTGTTTTCATCATCCCAG+AGG - chr2.1:7431164-7431183 None:intergenic 35.0%
AAAAAGCTCAGAACCGACAA+TGG + chr2.1:7430733-7430752 MS.gene31193:intron 40.0%
AAACTTTACCAAGGTTACCG+GGG - chr2.1:7430057-7430076 None:intergenic 40.0%
AAAGGATTCCAGCAGAAAGA+AGG + chr2.1:7431687-7431706 MS.gene31193:intron 40.0%
AAATCTTCCAATCATCACCG+TGG - chr2.1:7430243-7430262 None:intergenic 40.0%
AACAGAGTTAGGATTCATGC+AGG + chr2.1:7432766-7432785 MS.gene31193:intron 40.0%
AACTTCATATACCACTGCCT+TGG - chr2.1:7431948-7431967 None:intergenic 40.0%
AAGAAAAAGAACTCATGGCC+AGG + chr2.1:7432345-7432364 MS.gene31193:intron 40.0%
AAGAACACCTTTCCCATTGA+AGG - chr2.1:7433835-7433854 None:intergenic 40.0%
AAGTGGAAGAATCCCAAAGA+AGG + chr2.1:7430513-7430532 MS.gene31193:intron 40.0%
AAGTTGTGCTCAACTTCAGT+TGG + chr2.1:7432992-7433011 MS.gene31193:intron 40.0%
AATCGATGAAGGATGATGAG+TGG + chr2.1:7429261-7429280 MS.gene31193:CDS 40.0%
ACTCGAAATCTATCGAGTGT+TGG + chr2.1:7429825-7429844 MS.gene31193:CDS 40.0%
AGAGGAAGAAATTCAACCAG+AGG + chr2.1:7429740-7429759 MS.gene31193:CDS 40.0%
AGCAGGTTTATGTCAAATCC+AGG + chr2.1:7432452-7432471 MS.gene31193:intron 40.0%
AGCTCAAGTTTCTCCTTCTT+TGG - chr2.1:7430529-7430548 None:intergenic 40.0%
AGGCTTACCAAAGAACTTCT+GGG + chr2.1:7430909-7430928 MS.gene31193:intron 40.0%
AGGGAAAAGGTGAACTTAGT+TGG + chr2.1:7433705-7433724 MS.gene31193:CDS 40.0%
AGTCAATTCCTTCTTTCTGC+TGG - chr2.1:7431698-7431717 None:intergenic 40.0%
ATATACATGCACCAACCAGA+AGG + chr2.1:7431852-7431871 MS.gene31193:intron 40.0%
ATTCTGCCAATTCCTCTGAT+TGG - chr2.1:7431332-7431351 None:intergenic 40.0%
CAAATCCAGGTAAAGCTCAT+TGG + chr2.1:7432465-7432484 MS.gene31193:intron 40.0%
CAAATGGGTGTATCGAGTAA+AGG + chr2.1:7431620-7431639 MS.gene31193:intron 40.0%
CATAGATCCATCACTTCCTA+GGG + chr2.1:7433686-7433705 MS.gene31193:CDS 40.0%
CATTCGAGAACAAAGCACAT+AGG + chr2.1:7432851-7432870 MS.gene31193:intron 40.0%
CCAGAAGGATTCTCAGAAAA+AGG + chr2.1:7431867-7431886 MS.gene31193:intron 40.0%
CGCAGATATGTTAACAAAGG+TGG + chr2.1:7432952-7432971 MS.gene31193:intron 40.0%
CTCCAGTTCCTGAATTAAGA+AGG + chr2.1:7431391-7431410 MS.gene31193:CDS 40.0%
CTCTGGTCTCTTATTCTAAC+AGG - chr2.1:7433018-7433037 None:intergenic 40.0%
CTCTGTATGCAATACTGAAG+AGG - chr2.1:7429717-7429736 None:intergenic 40.0%
CTTAATTCAGGAACTGGAGT+AGG - chr2.1:7431390-7431409 None:intergenic 40.0%
CTTCATCAGATCTCTTCTTG+AGG + chr2.1:7432886-7432905 MS.gene31193:intron 40.0%
CTTCCAATTGCTGAAGCATA+TGG - chr2.1:7432374-7432393 None:intergenic 40.0%
CTTGAAGAAGCAACAATGGT+CGG - chr2.1:7432012-7432031 None:intergenic 40.0%
CTTTGATCTCCAATCAGACA+TGG + chr2.1:7431556-7431575 MS.gene31193:intron 40.0%
GAACTAGCTAAGTTACCCAA+GGG + chr2.1:7431579-7431598 MS.gene31193:intron 40.0%
GACCTTCTTAATTCAGGAAC+TGG - chr2.1:7431396-7431415 None:intergenic 40.0%
GAGGTGATTGTTCTTGAGAT+AGG - chr2.1:7432316-7432335 None:intergenic 40.0%
GCTCAAGTTTCTCCTTCTTT+GGG - chr2.1:7430528-7430547 None:intergenic 40.0%
GGAGCATAAAATACCAGAAG+AGG + chr2.1:7430987-7431006 MS.gene31193:intron 40.0%
GGAGGAAGAAAAAGAACTCA+TGG + chr2.1:7432340-7432359 MS.gene31193:intron 40.0%
GGTTATGGTGAAGATGAGTT+TGG + chr2.1:7431132-7431151 MS.gene31193:intron 40.0%
GTATTGCATACAGAGTCAAG+AGG + chr2.1:7429722-7429741 MS.gene31193:CDS 40.0%
GTGAAGACTGCATTTCTTCA+TGG + chr2.1:7431813-7431832 MS.gene31193:intron 40.0%
GTGAGAACTACGATGATTTC+TGG - chr2.1:7429804-7429823 None:intergenic 40.0%
GTTTGAAAGCTTCATGCACA+AGG + chr2.1:7431965-7431984 MS.gene31193:intron 40.0%
TAAGTTACCCAAGGGAAAGA+AGG + chr2.1:7431587-7431606 MS.gene31193:intron 40.0%
TAGGCCATATGAGTGAAAAG+GGG + chr2.1:7430383-7430402 MS.gene31193:intron 40.0%
TAGTCATAGTGCGATACATC+TGG + chr2.1:7432811-7432830 MS.gene31193:intron 40.0%
TATGAGTGAAAAGGGGATGA+AGG + chr2.1:7430390-7430409 MS.gene31193:intron 40.0%
TCAAGAACAATCACCTCAGA+CGG + chr2.1:7432319-7432338 MS.gene31193:intron 40.0%
TCAGCTTACTTAATCAACCG+AGG + chr2.1:7430949-7430968 MS.gene31193:intron 40.0%
TCATAGATCCATCACTTCCT+AGG + chr2.1:7433685-7433704 MS.gene31193:CDS 40.0%
TCCCGCAGATATGTTAACAA+AGG + chr2.1:7432949-7432968 MS.gene31193:intron 40.0%
TGGAAGTTTGATGTACGCAA+TGG + chr2.1:7432388-7432407 MS.gene31193:intron 40.0%
TGGTGAAGCTCAATACTATC+AGG + chr2.1:7431739-7431758 MS.gene31193:intron 40.0%
TGTATCTCTTAGAGCCATCA+TGG - chr2.1:7431650-7431669 None:intergenic 40.0%
TGTTGGAACTGTGGAAAGAT+GGG + chr2.1:7429842-7429861 MS.gene31193:CDS 40.0%
TTCTGCCAATTCCTCTGATT+GGG - chr2.1:7431331-7431350 None:intergenic 40.0%
TTTCAAGAGATGGAAAGCCA+TGG + chr2.1:7430684-7430703 MS.gene31193:intron 40.0%
! AAGTGCACTTTCATCGGTTA+TGG + chr2.1:7431117-7431136 MS.gene31193:intron 40.0%
! ACTAAGTTCACCTTTTCCCT+AGG - chr2.1:7433705-7433724 None:intergenic 40.0%
! ACTTGTCTCATTTTCCACCA+TGG - chr2.1:7430704-7430723 None:intergenic 40.0%
! ATAGTATTGAGCTTCACCAC+TGG - chr2.1:7431738-7431757 None:intergenic 40.0%
! ATGATCACTCTAGGAAGGTA+TGG + chr2.1:7430623-7430642 MS.gene31193:intron 40.0%
! ATTTCTGGATTTGGATCGTC+TGG - chr2.1:7429789-7429808 None:intergenic 40.0%
! CGGAGATTAAGTTTTTCGTG+AGG - chr2.1:7430183-7430202 None:intergenic 40.0%
! CTCAAGATAGAGATTTTCGC+TGG - chr2.1:7431784-7431803 None:intergenic 40.0%
! GAAAGTGCACTTCTTGGATT+TGG - chr2.1:7431109-7431128 None:intergenic 40.0%
! GATATGTTCTTTGGAGAGCA+AGG + chr2.1:7429958-7429977 MS.gene31193:CDS 40.0%
! GGTAGTAGGTAATTGGTAGT+AGG + chr2.1:7433277-7433296 MS.gene31193:intron 40.0%
! TAGGTAATTGGTAGTAGGTG+AGG + chr2.1:7433282-7433301 MS.gene31193:intron 40.0%
! TCATCCCCTTTTCACTCATA+TGG - chr2.1:7430390-7430409 None:intergenic 40.0%
! TCCAAGAAGTGCACTTTCAT+CGG + chr2.1:7431111-7431130 MS.gene31193:intron 40.0%
! TGACGCGTTGATATGTTCTT+TGG + chr2.1:7429949-7429968 MS.gene31193:CDS 40.0%
! TGATCACTCTAGGAAGGTAT+GGG + chr2.1:7430624-7430643 MS.gene31193:intron 40.0%
! TGGTATCGAATTTGACGATG+AGG + chr2.1:7429532-7429551 MS.gene31193:CDS 40.0%
! TTTCTGAGAATCCTTCTGGT+TGG - chr2.1:7431866-7431885 None:intergenic 40.0%
!! AGAAGGCACTTCACAACAAA+TGG + chr2.1:7431604-7431623 MS.gene31193:intron 40.0%
!! AGAAGTTTTGCTATGAGCAC+GGG + chr2.1:7430782-7430801 MS.gene31193:intron 40.0%
!! CCTTTTTCTGAGAATCCTTC+TGG - chr2.1:7431870-7431889 None:intergenic 40.0%
!! GAAGGCACTTCACAACAAAT+GGG + chr2.1:7431605-7431624 MS.gene31193:intron 40.0%
!! TCATCATCCTTCATCGATTC+TGG - chr2.1:7429260-7429279 None:intergenic 40.0%
!! TCTGGTTTCTTTTCTGTGAG+AGG - chr2.1:7429242-7429261 None:intergenic 40.0%
AACTACGCACAATTTCCCCA+TGG - chr2.1:7433620-7433639 None:intergenic 45.0%
AAGAGCCTTCATAAGTCCAG+CGG - chr2.1:7429372-7429391 None:intergenic 45.0%
AATGCTTCCCACCAATGGAT+GGG - chr2.1:7430585-7430604 None:intergenic 45.0%
AATTATGTCCCCGGTAACCT+TGG + chr2.1:7430046-7430065 MS.gene31193:CDS 45.0%
ACAACTATCCCATCCATTGG+TGG + chr2.1:7430574-7430593 MS.gene31193:intron 45.0%
AGAACTACACCAAAGGATCG+AGG - chr2.1:7433651-7433670 None:intergenic 45.0%
AGAATGGAAAGAACTGTGCC+AGG + chr2.1:7430808-7430827 MS.gene31193:intron 45.0%
AGAGTCAGCTTTCAGACAAG+TGG + chr2.1:7430496-7430515 MS.gene31193:intron 45.0%
AGATGAGATTCCCCAATCAG+AGG + chr2.1:7431317-7431336 MS.gene31193:CDS 45.0%
AGCTAGTTCCCATGTCTGAT+TGG - chr2.1:7431568-7431587 None:intergenic 45.0%
AGGTAAAGCTCATTGGGAAG+CGG + chr2.1:7432472-7432491 MS.gene31193:intron 45.0%
AGTGGGAGATTGTTGGCAAA+TGG + chr2.1:7433087-7433106 MS.gene31193:intron 45.0%
ATAGCTCGCGGTAAAAAGAG+TGG + chr2.1:7430280-7430299 MS.gene31193:intron 45.0%
ATAGTGCGATACATCTGGCA+AGG + chr2.1:7432816-7432835 MS.gene31193:intron 45.0%
ATCATCGATACAGCACTCAC+AGG + chr2.1:7433733-7433752 MS.gene31193:CDS 45.0%
ATGCAGTGGGAGTTATTAGC+AGG + chr2.1:7432435-7432454 MS.gene31193:intron 45.0%
ATGGGTGTATCGAGTAAAGG+AGG + chr2.1:7431623-7431642 MS.gene31193:intron 45.0%
CAACTATCCCATCCATTGGT+GGG + chr2.1:7430575-7430594 MS.gene31193:intron 45.0%
CAAGTGCTTGTCTATCGAGA+AGG - chr2.1:7429289-7429308 None:intergenic 45.0%
CACCACTGGAGCAAAAATCT+CGG - chr2.1:7431724-7431743 None:intergenic 45.0%
CAGATCTCTTCTTGAGGATG+AGG + chr2.1:7432892-7432911 MS.gene31193:intron 45.0%
CAGGCTTACCAAAGAACTTC+TGG + chr2.1:7430908-7430927 MS.gene31193:intron 45.0%
CCAACAACTATCCCATCCAT+TGG + chr2.1:7430571-7430590 MS.gene31193:intron 45.0%
CCAATGGATGGGATAGTTGT+TGG - chr2.1:7430574-7430593 None:intergenic 45.0%
CGAGCCTGTTTATGTAGAGA+TGG + chr2.1:7431272-7431291 MS.gene31193:CDS 45.0%
CTCAGCTACACCATTGTGTT+GGG - chr2.1:7430839-7430858 None:intergenic 45.0%
CTCATTGGGAAGCGGTTAAA+TGG + chr2.1:7432480-7432499 MS.gene31193:intron 45.0%
CTTAATCAACCGAGGTCCAT+CGG + chr2.1:7430957-7430976 MS.gene31193:intron 45.0%
CTTCTCGATAGACAAGCACT+TGG + chr2.1:7429287-7429306 MS.gene31193:CDS 45.0%
GAAAGCTTCATGCACAAGGA+AGG + chr2.1:7431969-7431988 MS.gene31193:intron 45.0%
GAAGTAATGCTTCCCACCAA+TGG - chr2.1:7430590-7430609 None:intergenic 45.0%
GAATCAAGAGGCGAAAGATG+AGG + chr2.1:7429898-7429917 MS.gene31193:CDS 45.0%
GAATCCTTTGACCACTAGTC+GGG - chr2.1:7431676-7431695 None:intergenic 45.0%
GATTCCCCAATCAGAGGAAT+TGG + chr2.1:7431323-7431342 MS.gene31193:CDS 45.0%
GATTGGGGAATCTCATCTGT+GGG - chr2.1:7431315-7431334 None:intergenic 45.0%
GGAAAGAGAATATGGTGTGC+AGG + chr2.1:7431889-7431908 MS.gene31193:intron 45.0%
GGAACTAGCTAAGTTACCCA+AGG + chr2.1:7431578-7431597 MS.gene31193:intron 45.0%
GGAATCCTTTGACCACTAGT+CGG - chr2.1:7431677-7431696 None:intergenic 45.0%
GGAGATTGTTGGCAAATGGA+GGG + chr2.1:7433091-7433110 MS.gene31193:intron 45.0%
GGGCAGGCAAAGAAAATTCT+TGG + chr2.1:7432158-7432177 MS.gene31193:intron 45.0%
GGTACTCTTTACAAGACAGC+TGG + chr2.1:7430301-7430320 MS.gene31193:intron 45.0%
GTAGAGATGGATGATGTTCC+AGG + chr2.1:7431285-7431304 MS.gene31193:CDS 45.0%
GTCTTCAAGTGGGAGATTGT+TGG + chr2.1:7433080-7433099 MS.gene31193:intron 45.0%
GTGTTGGAACTGTGGAAAGA+TGG + chr2.1:7429841-7429860 MS.gene31193:CDS 45.0%
TAATGCTTCCCACCAATGGA+TGG - chr2.1:7430586-7430605 None:intergenic 45.0%
TACATACTCAGCCTCTGTAG+TGG - chr2.1:7432699-7432718 None:intergenic 45.0%
TACGTAGATGCAGACTTTGC+TGG + chr2.1:7432575-7432594 MS.gene31193:intron 45.0%
TCAGCTACACCATTGTGTTG+GGG - chr2.1:7430838-7430857 None:intergenic 45.0%
TCATCGATACAGCACTCACA+GGG + chr2.1:7433734-7433753 MS.gene31193:CDS 45.0%
TCCATCACTTCCTAGGGAAA+AGG + chr2.1:7433692-7433711 MS.gene31193:CDS 45.0%
TCGCCTCTTGATTCTTTGCT+GGG - chr2.1:7429892-7429911 None:intergenic 45.0%
TCTGCCAATTCCTCTGATTG+GGG - chr2.1:7431330-7431349 None:intergenic 45.0%
TCTTGTAAGGTTGTGGGCAA+AGG + chr2.1:7430094-7430113 MS.gene31193:CDS 45.0%
TGACAAGCCTTCAATGGGAA+AGG + chr2.1:7433825-7433844 MS.gene31193:intron 45.0%
TGATGAAGCATGTCAGACCA+CGG + chr2.1:7431491-7431510 MS.gene31193:CDS 45.0%
TGATTGGGGAATCTCATCTG+TGG - chr2.1:7431316-7431335 None:intergenic 45.0%
TGCACAGAGAACTACACCAA+AGG - chr2.1:7433658-7433677 None:intergenic 45.0%
TGCTGAAGCATATGGAATCC+TGG - chr2.1:7432366-7432385 None:intergenic 45.0%
TGTCTTCCCTACCAGATAGT+TGG + chr2.1:7429573-7429592 MS.gene31193:CDS 45.0%
TTCCTAACACCTCGATCCTT+TGG + chr2.1:7433639-7433658 MS.gene31193:intron 45.0%
TTCGCCTCTTGATTCTTTGC+TGG - chr2.1:7429893-7429912 None:intergenic 45.0%
TTCTCAGTGAAGAGATCCGA+CGG + chr2.1:7429669-7429688 MS.gene31193:CDS 45.0%
TTGGTGTAGTTCTCTGTGCA+AGG + chr2.1:7433658-7433677 MS.gene31193:intron 45.0%
TTTACCACGTCCATTTCCTC+TGG - chr2.1:7429759-7429778 None:intergenic 45.0%
TTTACGCTTCGGATGACAGA+AGG + chr2.1:7429449-7429468 MS.gene31193:CDS 45.0%
TTTCCACTCCATACCTCTTC+TGG - chr2.1:7431003-7431022 None:intergenic 45.0%
! ACCGATGAAAGTGCACTTCT+TGG - chr2.1:7431115-7431134 None:intergenic 45.0%
! ACCTTTTCCCTAGGAAGTGA+TGG - chr2.1:7433696-7433715 None:intergenic 45.0%
! AGAGGTATGGAGTGGAAAAG+AGG + chr2.1:7431005-7431024 MS.gene31193:intron 45.0%
! AGGCGAAAATGACTTGCCAA+CGG - chr2.1:7432296-7432315 None:intergenic 45.0%
! ATACCAGAAGAGGTATGGAG+TGG + chr2.1:7430997-7431016 MS.gene31193:intron 45.0%
! GATCACCGAAGAAGTACAAC+TGG + chr2.1:7432605-7432624 MS.gene31193:intron 45.0%
! TCTTTTTCTTCCTCCGTCTG+AGG - chr2.1:7432335-7432354 None:intergenic 45.0%
! TGAAGTGCCTTCTTTCCCTT+GGG - chr2.1:7431597-7431616 None:intergenic 45.0%
! TGACATGAAGGATTTAGGGC+AGG + chr2.1:7432142-7432161 MS.gene31193:intron 45.0%
! TGTTTTCATCATCCCAGAGG+CGG - chr2.1:7431161-7431180 None:intergenic 45.0%
! TTGGTACTGGAGCAGTTAGT+TGG + chr2.1:7432642-7432661 MS.gene31193:intron 45.0%
!! GGAAGTGATGGATCTATGAC+AGG - chr2.1:7433684-7433703 None:intergenic 45.0%
!! GGTGTTGACAAGCCTTCAAT+GGG + chr2.1:7433820-7433839 MS.gene31193:intron 45.0%
!! TCTATCGAGTGTTGGAACTG+TGG + chr2.1:7429833-7429852 MS.gene31193:CDS 45.0%
!! TGGTGTTGACAAGCCTTCAA+TGG + chr2.1:7433819-7433838 MS.gene31193:intron 45.0%
!! TGTCGCTTTATCCACTACAG+AGG + chr2.1:7432685-7432704 MS.gene31193:intron 45.0%
AAAGATCTGCAGCAGCAGTC+CGG + chr2.1:7433513-7433532 MS.gene31193:intron 50.0%
AAAGCCCGACTAGTGGTCAA+AGG + chr2.1:7431669-7431688 MS.gene31193:intron 50.0%
AACACAACCACCAACGACTC+AGG + chr2.1:7431243-7431262 MS.gene31193:intron 50.0%
AACCACCGCTGGACTTATGA+AGG + chr2.1:7429364-7429383 MS.gene31193:CDS 50.0%
AAGCTCAGAACCGACAATGG+TGG + chr2.1:7430736-7430755 MS.gene31193:intron 50.0%
AAGTTCGATGGTGCGGACTT+TGG + chr2.1:7429164-7429183 MS.gene31193:CDS 50.0%
AATGGTCGGCATTGCACTTC+TGG - chr2.1:7431998-7432017 None:intergenic 50.0%
ACAGTAGCGCTCCAACTATC+TGG - chr2.1:7429587-7429606 None:intergenic 50.0%
AGAACAATCACCTCAGACGG+AGG + chr2.1:7432322-7432341 MS.gene31193:intron 50.0%
AGACCACGGATGCTAGTAAG+TGG + chr2.1:7431505-7431524 MS.gene31193:intron 50.0%
AGCGCTCCAACTATCTGGTA+GGG - chr2.1:7429582-7429601 None:intergenic 50.0%
ATCTCATCTGTGGGACTTCC+TGG - chr2.1:7431306-7431325 None:intergenic 50.0%
ATGGCCTGAAACAAGCTCCA+AGG + chr2.1:7431928-7431947 MS.gene31193:intron 50.0%
ATTCACCCAACTCTCTCCGT+CGG - chr2.1:7429688-7429707 None:intergenic 50.0%
CAAATCGGTTAGCACACCGT+TGG + chr2.1:7432277-7432296 MS.gene31193:intron 50.0%
CAACATGGGCGATGCCAAAT+CGG + chr2.1:7432262-7432281 MS.gene31193:intron 50.0%
CAACGGTGTGCTAACCGATT+TGG - chr2.1:7432279-7432298 None:intergenic 50.0%
CAAGAGATGGAAAGCCATGG+TGG + chr2.1:7430687-7430706 MS.gene31193:intron 50.0%
CAGTCTTCCACGGTGATGAT+TGG + chr2.1:7430233-7430252 MS.gene31193:intron 50.0%
CGAGTAAAGGAGGACCATGA+TGG + chr2.1:7431633-7431652 MS.gene31193:intron 50.0%
CTATGAGCACGGGATCAGAA+TGG + chr2.1:7430792-7430811 MS.gene31193:intron 50.0%
CTTAATCTCCGTAGGCCAGT+TGG + chr2.1:7430192-7430211 MS.gene31193:intron 50.0%
GACCACGGATGCTAGTAAGT+GGG + chr2.1:7431506-7431525 MS.gene31193:intron 50.0%
GAGATACAAAGCCCGACTAG+TGG + chr2.1:7431662-7431681 MS.gene31193:intron 50.0%
GAGTCTTGGGTGTTAGACTC+TGG + chr2.1:7429983-7430002 MS.gene31193:CDS 50.0%
GCAAAAGAGAAAACCACCGC+TGG + chr2.1:7429353-7429372 MS.gene31193:CDS 50.0%
GCTCAGCTACACCATTGTGT+TGG - chr2.1:7430840-7430859 None:intergenic 50.0%
GCTCCCAGCAAAGAATCAAG+AGG + chr2.1:7429886-7429905 MS.gene31193:CDS 50.0%
GCTTCCCAATGAGCTTTACC+TGG - chr2.1:7432473-7432492 None:intergenic 50.0%
GCTTCTGCCCAGAAGTTCTT+TGG - chr2.1:7430919-7430938 None:intergenic 50.0%
GGAGAGCAAGGAAGAGTCTT+GGG + chr2.1:7429970-7429989 MS.gene31193:CDS 50.0%
GGCCAATAATGCCTACTCTC+CGG - chr2.1:7433535-7433554 None:intergenic 50.0%
GGCTACACAACAGTCTTCCA+CGG + chr2.1:7430223-7430242 MS.gene31193:intron 50.0%
GGGAGATTGTTGGCAAATGG+AGG + chr2.1:7433090-7433109 MS.gene31193:intron 50.0%
GTCCGGAGAGTAGGCATTAT+TGG + chr2.1:7433530-7433549 MS.gene31193:intron 50.0%
TAGCGCTCCAACTATCTGGT+AGG - chr2.1:7429583-7429602 None:intergenic 50.0%
TCAACCAGAGGAAATGGACG+TGG + chr2.1:7429752-7429771 MS.gene31193:CDS 50.0%
TGAAACAAGCTCCAAGGCAG+TGG + chr2.1:7431934-7431953 MS.gene31193:intron 50.0%
TGAGGCGGTTGTTTACGCTT+CGG + chr2.1:7429438-7429457 MS.gene31193:CDS 50.0%
TGGAGAGCAAGGAAGAGTCT+TGG + chr2.1:7429969-7429988 MS.gene31193:CDS 50.0%
TGTACGCAATGGTCTGTACG+AGG + chr2.1:7432399-7432418 MS.gene31193:intron 50.0%
! AATGTTGCTTCCACCTCAGG+AGG + chr2.1:7429923-7429942 MS.gene31193:CDS 50.0%
! ACTGCCTTGGAGCTTGTTTC+AGG - chr2.1:7431935-7431954 None:intergenic 50.0%
! CACCAAAGGATCGAGGTGTT+AGG - chr2.1:7433644-7433663 None:intergenic 50.0%
! CACCGAGATTTTTGCTCCAG+TGG + chr2.1:7431719-7431738 MS.gene31193:intron 50.0%
! CCAGACATTGGCTATGCAGT+GGG + chr2.1:7432422-7432441 MS.gene31193:intron 50.0%
! CCTGGGTGTAATTGGGTTGT+GGG + chr2.1:7433442-7433461 MS.gene31193:intron 50.0%
! GCAAATGTTGCTTCCACCTC+AGG + chr2.1:7429920-7429939 MS.gene31193:CDS 50.0%
! GTGAAGTGCCTTCTTTCCCT+TGG - chr2.1:7431598-7431617 None:intergenic 50.0%
! TAGTTGGAGCGCTACTGTCA+CGG + chr2.1:7429589-7429608 MS.gene31193:CDS 50.0%
! TCCTGGGTGTAATTGGGTTG+TGG + chr2.1:7433441-7433460 MS.gene31193:intron 50.0%
! TTATGCTCCAATGGCACCGA+TGG - chr2.1:7430976-7430995 None:intergenic 50.0%
!!! ATGGTGCGGACTTTGGCTTT+TGG + chr2.1:7429171-7429190 MS.gene31193:CDS 50.0%
ACGGCTGTGAGTAGCTCATC+GGG + chr2.1:7429608-7429627 MS.gene31193:CDS 55.0%
AGAAGCTTGCGTGTGCAGTC+AGG + chr2.1:7430889-7430908 MS.gene31193:intron 55.0%
AGAAGGCTGCTGCATGATCG+AGG + chr2.1:7433036-7433055 MS.gene31193:intron 55.0%
AGAGATCCGACGGAGAGAGT+TGG + chr2.1:7429679-7429698 MS.gene31193:CDS 55.0%
AGCCTTCATAAGTCCAGCGG+TGG - chr2.1:7429369-7429388 None:intergenic 55.0%
ATGAGTTTGGCTACCGCCTC+TGG + chr2.1:7431145-7431164 MS.gene31193:intron 55.0%
CACGGCTGTGAGTAGCTCAT+CGG + chr2.1:7429607-7429626 MS.gene31193:CDS 55.0%
CCCACAACCCAATTACACCC+AGG - chr2.1:7433445-7433464 None:intergenic 55.0%
CCCACTGCATAGCCAATGTC+TGG - chr2.1:7432425-7432444 None:intergenic 55.0%
CTCCCACTTACTAGCATCCG+TGG - chr2.1:7431511-7431530 None:intergenic 55.0%
CTCGCTCAATCCTGAGTCGT+TGG - chr2.1:7431256-7431275 None:intergenic 55.0%
GAGATCCGACGGAGAGAGTT+GGG + chr2.1:7429680-7429699 MS.gene31193:CDS 55.0%
GATCATGCAGCAGCCTTCTC+TGG - chr2.1:7433035-7433054 None:intergenic 55.0%
GCTCAATCCTGAGTCGTTGG+TGG - chr2.1:7431253-7431272 None:intergenic 55.0%
GGAACTGGAGTAGGATGCAC+TGG - chr2.1:7431381-7431400 None:intergenic 55.0%
GGTGCAATGACGATAGCTCG+CGG + chr2.1:7430268-7430287 MS.gene31193:intron 55.0%
GTCTGTACGAGGCCAGACAT+TGG + chr2.1:7432410-7432429 MS.gene31193:intron 55.0%
TGACTGCACACGCAAGCTTC+TGG - chr2.1:7430890-7430909 None:intergenic 55.0%
TGAGTTTGGCTACCGCCTCT+GGG + chr2.1:7431146-7431165 MS.gene31193:intron 55.0%
TGTAGCCTTCGTCAGCCAAC+TGG - chr2.1:7430210-7430229 None:intergenic 55.0%
! GCCAGACATTGGCTATGCAG+TGG + chr2.1:7432421-7432440 MS.gene31193:intron 55.0%
! GGATGCACTGGTGTGTCAGA+CGG - chr2.1:7431369-7431388 None:intergenic 55.0%
! TTCGTCAGCCAACTGGCCTA+CGG - chr2.1:7430203-7430222 None:intergenic 55.0%
CCAGGCACTCCCCAACACAA+TGG + chr2.1:7430826-7430845 MS.gene31193:intron 60.0%
GTAGGCCAGTTGGCTGACGA+AGG + chr2.1:7430202-7430221 MS.gene31193:intron 60.0%
GTTGCTTCCACCTCAGGAGG+AGG + chr2.1:7429926-7429945 MS.gene31193:CDS 60.0%
! GATGACAGAAGGCGCGTCAG+TGG + chr2.1:7429460-7429479 MS.gene31193:CDS 60.0%
!! CCAATGGCACCGATGGACCT+CGG - chr2.1:7430969-7430988 None:intergenic 60.0%
!! CCATTGTGTTGGGGAGTGCC+TGG - chr2.1:7430829-7430848 None:intergenic 60.0%
CAACGCGTCACCTCCTCCTG+AGG - chr2.1:7429939-7429958 None:intergenic 65.0%
GCAGCAGCAGTCCGGAGAGT+AGG + chr2.1:7433521-7433540 MS.gene31193:intron 65.0%
!! CCGAGGTCCATCGGTGCCAT+TGG + chr2.1:7430966-7430985 MS.gene31193:intron 65.0%
CGCGTCACCTCCTCCTGAGG+TGG - chr2.1:7429936-7429955 None:intergenic 70.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 7429131 7433897 7429131 ID=MS.gene31193
chr2.1 mRNA 7429131 7433897 7429131 ID=MS.gene31193.t1;Parent=MS.gene31193
chr2.1 exon 7429131 7430115 7429131 ID=MS.gene31193.t1.exon1;Parent=MS.gene31193.t1
chr2.1 CDS 7429131 7430115 7429131 ID=cds.MS.gene31193.t1;Parent=MS.gene31193.t1
chr2.1 exon 7431265 7431519 7431265 ID=MS.gene31193.t1.exon2;Parent=MS.gene31193.t1
chr2.1 CDS 7431265 7431519 7431265 ID=cds.MS.gene31193.t1;Parent=MS.gene31193.t1
chr2.1 exon 7433667 7433755 7433667 ID=MS.gene31193.t1.exon3;Parent=MS.gene31193.t1
chr2.1 CDS 7433667 7433755 7433667 ID=cds.MS.gene31193.t1;Parent=MS.gene31193.t1
chr2.1 exon 7433832 7433897 7433832 ID=MS.gene31193.t1.exon4;Parent=MS.gene31193.t1
chr2.1 CDS 7433832 7433897 7433832 ID=cds.MS.gene31193.t1;Parent=MS.gene31193.t1
Gene Sequence

>MS.gene31193

ATGGCTGCAGACGAAGGAAAGGTGAAAATTGAAAAGTTCGATGGTGCGGACTTTGGCTTTTGGAAGATGCAGATCGAAGATTATTTGTATCAGAAAAAGCTACATCAACCTCTCACAGAAAAGAAACCAGAATCGATGAAGGATGATGAGTGGAACCTTCTCGATAGACAAGCACTTGGTGTTGTGCGATTGTCGTTATCTCGAAATGTTGCTTTTAACATAGCAAAAGAGAAAACCACCGCTGGACTTATGAAGGCTCTTTCTAGCATGTATGAAAAGCCTTCAGCATCAAATAAAGTTCATTTGATGAGGCGGTTGTTTACGCTTCGGATGACAGAAGGCGCGTCAGTGGCGCAACATATCAATGAACTTAATATTGTCACAACCCAATTAAGTTCAGTTGGTATCGAATTTGACGATGAGGTACGAGCATTGATACTTTTGTCTTCCCTACCAGATAGTTGGAGCGCTACTGTCACGGCTGTGAGTAGCTCATCGGGAAGCAAAAAGATGAAATTTGATGATGTTCGTGATCTGGTTCTCAGTGAAGAGATCCGACGGAGAGAGTTGGGTGAATCATCATCCTCTTCAGTATTGCATACAGAGTCAAGAGGAAGAAATTCAACCAGAGGAAATGGACGTGGTAAATCAAAGGCCAGACGATCCAAATCCAGAAATCATCGTAGTTCTCACAACTCGAAATCTATCGAGTGTTGGAACTGTGGAAAGATGGGTCACTTCAAAAATCAGTGTAGGCTCCCAGCAAAGAATCAAGAGGCGAAAGATGAGGCAAATGTTGCTTCCACCTCAGGAGGAGGTGACGCGTTGATATGTTCTTTGGAGAGCAAGGAAGAGTCTTGGGTGTTAGACTCTGGAGCGTCTTTTCATGCTACTTCTCAGAAAGAATTCTTCAAGAATTATGTCCCCGGTAACCTTGGTAAAGTTTACCTTGGAAATGAACAATCTTGTAAGGTTGTGGGCAAAGGTGAAGTTAAGATTAAGTTGAATGGTTCTGTATGGGAATTGAAAAATGTCAGACATATTCCCGACCTCACGAAAAACTTAATCTCCGTAGGCCAGTTGGCTGACGAAGGCTACACAACAGTCTTCCACGGTGATGATTGGAAGATTTCAAAAGGTGCAATGACGATAGCTCGCGGTAAAAAGAGTGGTACTCTTTACAAGACAGCTGGAGCATGCCATTTGATTGCAGTTGCAACAAATGAAAATCCTAATCTATGGCACAAGAGATTAGGCCATATGAGTGAAAAGGGGATGAAGGTTATGCACTCAAAAGGAAAACTACCAAGTCTTCGGTCAATAGAAATTGACATATGTGAAGACTGTATACTTGGAAAGCAGAAGAGAGTCAGCTTTCAGACAAGTGGAAGAATCCCAAAGAAGGAGAAACTTGAGCTTGTTTACTCTGATGTTTGGGGTCCAACAACTATCCCATCCATTGGTGGGAAGCATTACTTCGTGACTTTTATTGATGATCACTCTAGGAAGGTATGGGTATACTTTCTGAAACATAAGTCTGAAGTATTTGAAGCTTTCAAGAGATGGAAAGCCATGGTGGAAAATGAGACAAGTTTGAAGATCAAAAAGCTCAGAACCGACAATGGTGGTGAATATGAAGACACCAAATTCAAGAAGTTTTGCTATGAGCACGGGATCAGAATGGAAAGAACTGTGCCAGGCACTCCCCAACACAATGGTGTAGCTGAGCGTATGAATAGAACATTGACTGAGAGAGCCAGAAGCTTGCGTGTGCAGTCAGGCTTACCAAAGAACTTCTGGGCAGAAGCAGTCAACACATCAGCTTACTTAATCAACCGAGGTCCATCGGTGCCATTGGAGCATAAAATACCAGAAGAGGTATGGAGTGGAAAAGAGGTCAAACTCTCACATCTTAGAGTTTTCGGATGTGTAGCATATGTGCATATTAGTGATCAAGGTAGAAATAAACTTGATCCCAAATCCAAGAAGTGCACTTTCATCGGTTATGGTGAAGATGAGTTTGGCTACCGCCTCTGGGATGATGAAAACAAAAAGATGGTTCGCAGTAGAGATGTGATCTTCAATGAAAGAGTGATGTACAAAGACAGGCATAACACAACCACCAACGACTCAGGATTGAGCGAGCCTGTTTATGTAGAGATGGATGATGTTCCAGGAAGTCCCACAGATGAGATTCCCCAATCAGAGGAATTGGCAGAATCAAGCATCAGACAACCGTCTGACACACCAGTGCATCCTACTCCAGTTCCTGAATTAAGAAGGTCTTCTAGACTTCGTGTTCCAAACAGCAGATACATAAACTACATGTTGTTAACTGATGGAGGAGAGCCTGAAGATTATGATGAAGCATGTCAGACCACGGATGCTAGTAAGTGGGAGCTTGCCATGAAAGACGAAATGAAGTCTTTGATCTCCAATCAGACATGGGAACTAGCTAAGTTACCCAAGGGAAAGAAGGCACTTCACAACAAATGGGTGTATCGAGTAAAGGAGGACCATGATGGCTCTAAGAGATACAAAGCCCGACTAGTGGTCAAAGGATTCCAGCAGAAAGAAGGAATTGACTACACCGAGATTTTTGCTCCAGTGGTGAAGCTCAATACTATCAGGTCTGTCTTAAGTATTGTTGCCAGCGAAAATCTCTATCTTGAGCAGTTAGATGTGAAGACTGCATTTCTTCATGGAGACTTAAATGAGGAGATATACATGCACCAACCAGAAGGATTCTCAGAAAAAGGGAAAGAGAATATGGTGTGCAGGTTAAAGAAGAGCTTGTATGGCCTGAAACAAGCTCCAAGGCAGTGGTATATGAAGTTTGAAAGCTTCATGCACAAGGAAGGTTTCCAGAAGTGCAATGCCGACCATTGTTGCTTCTTCAAGAGATATAAGTCAAGTTATATCATTTTGCTACTTTATGTTGATGATATGTTAGTAGCAGGCTCAGACATTGATGAGATCAAAAACTTGAAGATGCAATTGTCAAAAGAGTTTGACATGAAGGATTTAGGGCAGGCAAAGAAAATTCTTGGTATGCAAATCACGAGAGATAAGCAAAAAGGAGTTTTGCAGTTATCTCAAGCATAGTACATCAACCGTGTTTTGCAAAGATTCAACATGGGCGATGCCAAATCGGTTAGCACACCGTTGGCAAGTCATTTTCGCCTATCTCAAGAACAATCACCTCAGACGGAGGAAGAAAAAGAACTCATGGCCAGGATTCCATATGCTTCAGCAATTGGAAGTTTGATGTACGCAATGGTCTGTACGAGGCCAGACATTGGCTATGCAGTGGGAGTTATTAGCAGGTTTATGTCAAATCCAGGTAAAGCTCATTGGGAAGCGGTTAAATGGATTTTGAGGTATCTAAGAGGCACCACAGAGAAATGTTTGTACTTCAGCAAAGGAGAGATAAAAGTAGAAGGCTACGTAGATGCAGACTTTGCTGGTGAAGTTGATCACCGAAGAAGTACAACTGGTTATATATTTACTGTTGGTACTGGAGCAGTTAGTTGGATGTCGCGAATACAAAAGATTGTCGCTTTATCCACTACAGAGGCTGAGTATGTAGCAGTAACAGAAGCTAGCAAAGAATTGATATGGCTTCAAGGATTGTTAACAGAGTTAGGATTCATGCAGGAGAAATGTGCTTTGTACAGTGATAGTCATAGTGCGATACATCTGGCAAGGAATTCAGCATTTCATTCGAGAACAAAGCACATAGGTCTTCGTTATCACTTCATCAGATCTCTTCTTGAGGATGAGGTTCTAACATTGATCAAAATTCAAGGAAGTAAGAATCCCGCAGATATGTTAACAAAGGTGGTGACTATCGACAAACTGAAGTTGTGCTCAACTTCAGTTGGCCTGTTAGAATAAGAGACCAGAGAAGGCTGCTGCATGATCGAGGTGTGAAGACCGATTGAAATCAGTCTTCAAGTGGGAGATTGTTGGCAAATGGAGGGACCCACCATTGCATGTGTGAATAAAAGAATGAATAAAATACACCGAAAGTTAAATGACCAAAAGTTTTTGGCATTTGACAGCAATACATGTTTGAAAAGCATGGCAATTGTTGGTGAACATTGTTGGGTACCTACTACATAGTGCAATTGTTGGTGAATAATTGGTAGTAGGTAATTGGTAGTAGGTGAGGCAATGACTTTGCACCCCTATAAATAGCTTGCTTGCAAACCATTGTAATAACAACACAGAACAACAACAACAACACAAAATATATTACATCAGTAGAGAGTTTAGAAAAACTCAGTGTGAGAATTTTAGGAGAAAATTCCTGGGTGTAATTGGGTTGTGGGTAGTGAGAGTTTGTGAGTGTTTGTAAACACATATATTTCCTTTATTAAAAAGATCTGCAGCAGCAGTCCGGAGAGTAGGCATTATTGGCCGAACTTCGTTAACAATCTTGTGTGTTGTTATTCCGCATTTATTCCACTTCTACTTAATCTGACCATGGGGAAATTGTGCGTAGTTTCCTAACACCTCGATCCTTTGGTGTAGTTCTCTGTGCAAGGCCTGTCATAGATCCATCACTTCCTAGGGAAAAGGTGAACTTAGTTGGAATAAATCATCGATACAGCACTCACAGGGTAAATCAAAGCAGATTCTCTTAGGAAGTCTGCAGAAACTGCTGAAAAATGCTTGGTTTATTATGGTGTTGACAAGCCTTCAATGGGAAAGGTGTTCTTGAATTTAGAGTATGCTCTTCAACTTCAAGAAGCTGTTGTTTGA
Protein sequence

>MS.gene31193.t1

MAADEGKVKIEKFDGADFGFWKMQIEDYLYQKKLHQPLTEKKPESMKDDEWNLLDRQALGVVRLSLSRNVAFNIAKEKTTAGLMKALSSMYEKPSASNKVHLMRRLFTLRMTEGASVAQHINELNIVTTQLSSVGIEFDDEVRALILLSSLPDSWSATVTAVSSSSGSKKMKFDDVRDLVLSEEIRRRELGESSSSSVLHTESRGRNSTRGNGRGKSKARRSKSRNHRSSHNSKSIECWNCGKMGHFKNQCRLPAKNQEAKDEANVASTSGGGDALICSLESKEESWVLDSGASFHATSQKEFFKNYVPGNLGKVYLGNEQSCKVVGKGLSEPVYVEMDDVPGSPTDEIPQSEELAESSIRQPSDTPVHPTPVPELRRSSRLRVPNSRYINYMLLTDGGEPEDYDEACQTTDAILCARPVIDPSLPREKVNLVGINHRYSTHRPSMGKVFLNLEYALQLQEAVV