AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene32594

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32594.t1 MTR_3g107880 97.644 382 8 1 1 382 1 381 0.0 766
MS.gene32594.t1 MTR_3g107880 97.382 382 8 2 1 382 1 380 0.0 759
MS.gene32594.t1 MTR_3g107880 97.840 324 6 1 59 382 1 323 0.0 649
MS.gene32594.t1 MTR_4g116420 58.497 306 123 3 76 378 79 383 5.68e-127 370
MS.gene32594.t1 MTR_5g024340 54.575 306 133 4 74 378 77 377 2.11e-112 333
MS.gene32594.t1 MTR_1g086350 45.402 348 160 8 49 378 50 385 1.74e-89 275
MS.gene32594.t1 MTR_1g086350 45.906 342 155 8 55 378 40 369 4.10e-89 273
MS.gene32594.t1 MTR_2g033000 43.491 338 174 7 55 379 34 367 3.71e-85 263
MS.gene32594.t1 MTR_4g123080 44.828 319 151 7 77 378 51 361 4.94e-80 250
MS.gene32594.t1 MTR_4g123080 44.828 319 151 7 77 378 69 379 5.58e-80 250
MS.gene32594.t1 MTR_1g086350 48.364 275 117 6 122 378 16 283 2.88e-77 240
MS.gene32594.t1 MTR_1g014640 36.162 271 147 8 80 346 75 323 2.32e-40 146
MS.gene32594.t1 MTR_1g013400 36.162 271 147 8 80 346 75 323 2.32e-40 146
MS.gene32594.t1 MTR_1g014190 29.714 350 177 8 61 357 5 338 3.67e-40 146
MS.gene32594.t1 MTR_1g050520 35.106 282 148 9 77 344 382 642 3.96e-40 150
MS.gene32594.t1 MTR_1g014190 29.714 350 177 8 61 357 43 376 7.38e-40 146
MS.gene32594.t1 MTR_3g105880 29.944 354 175 9 59 357 3 338 9.17e-40 145
MS.gene32594.t1 MTR_3g105730 35.055 271 150 8 80 346 32 280 1.60e-38 140
MS.gene32594.t1 MTR_4g007440 30.530 321 156 7 81 347 22 329 1.87e-38 141
MS.gene32594.t1 MTR_3g105730 34.532 278 156 8 73 346 3 258 2.08e-38 139
MS.gene32594.t1 MTR_5g071550 35.926 270 138 7 90 348 131 376 2.27e-38 141
MS.gene32594.t1 MTR_3g105880 32.131 305 141 7 59 313 3 291 5.67e-38 139
MS.gene32594.t1 MTR_6g081850 31.392 309 170 8 66 348 28 320 1.56e-37 138
MS.gene32594.t1 MTR_4g123080 45.679 162 76 4 224 378 110 266 2.20e-37 136
MS.gene32594.t1 MTR_3g464650 35.821 268 139 8 90 347 71 315 4.96e-37 136
MS.gene32594.t1 MTR_1g115570 35.227 264 143 8 90 350 103 341 1.05e-36 136
MS.gene32594.t1 MTR_3g074610 35.983 239 134 5 114 347 58 282 3.75e-36 133
MS.gene32594.t1 MTR_5g063940 35.271 258 139 8 95 347 1 235 5.73e-36 131
MS.gene32594.t1 MTR_3g464700 38.053 226 113 6 90 309 95 299 1.13e-35 133
MS.gene32594.t1 MTR_2g008850 36.797 231 127 6 122 347 19 235 1.85e-35 130
MS.gene32594.t1 MTR_5g063940 35.271 258 139 8 95 347 48 282 2.06e-35 131
MS.gene32594.t1 MTR_3g091060 32.632 285 165 7 69 349 82 343 3.62e-35 132
MS.gene32594.t1 MTR_2g008850 36.797 231 127 6 122 347 65 281 1.82e-34 129
MS.gene32594.t1 MTR_4g094208 35.065 231 131 5 122 347 61 277 2.81e-32 123
MS.gene32594.t1 MTR_5g071550 37.611 226 108 6 90 306 131 332 3.14e-32 124
MS.gene32594.t1 MTR_2g078760 34.167 240 139 6 113 347 29 254 1.53e-31 120
MS.gene32594.t1 MTR_2g078760 34.167 240 139 6 113 347 108 333 4.24e-31 121
MS.gene32594.t1 MTR_2g040500 29.467 319 160 9 89 349 227 538 9.62e-30 120
MS.gene32594.t1 MTR_3g491830 27.152 302 171 7 79 343 57 346 1.11e-28 115
MS.gene32594.t1 MTR_1g015110 29.870 308 160 10 90 349 247 546 1.18e-28 117
MS.gene32594.t1 MTR_8g463130 33.195 241 140 7 113 347 57 282 7.06e-28 111
MS.gene32594.t1 MTR_8g463130 33.195 241 140 7 113 347 29 254 7.19e-28 110
MS.gene32594.t1 MTR_4g125810 29.836 305 159 9 84 344 208 501 1.12e-27 114
MS.gene32594.t1 MTR_3g068200 32.184 261 135 7 119 344 120 373 1.19e-27 112
MS.gene32594.t1 MTR_4g094542 33.824 272 147 10 83 346 118 364 1.07e-26 109
MS.gene32594.t1 MTR_1g028300 33.333 285 151 9 81 344 111 377 2.67e-26 108
MS.gene32594.t1 MTR_3g104710 29.710 276 151 7 110 349 274 542 3.43e-26 110
MS.gene32594.t1 MTR_5g009370 33.981 206 118 4 122 316 87 285 3.10e-25 105
MS.gene32594.t1 MTR_8g102550 28.617 311 174 8 84 363 104 397 6.72e-25 105
MS.gene32594.t1 MTR_5g080680 32.530 249 124 8 90 316 109 335 1.09e-24 104
MS.gene32594.t1 MTR_2g078760 33.333 192 113 5 113 299 108 289 7.91e-23 97.4
MS.gene32594.t1 MTR_3g105730 36.420 162 91 4 80 240 32 182 3.35e-22 94.4
MS.gene32594.t1 MTR_5g071550 40.397 151 68 4 90 235 131 264 1.48e-20 91.3
MS.gene32594.t1 MTR_7g100240 27.778 288 147 12 118 349 66 348 2.90e-18 85.9
MS.gene32594.t1 MTR_2g435550 28.938 273 139 13 124 350 94 357 3.36e-18 85.5
MS.gene32594.t1 MTR_2g435550 28.938 273 139 13 124 350 80 343 4.11e-18 85.1
MS.gene32594.t1 MTR_1g112840 27.915 283 143 12 118 344 76 353 8.42e-18 84.7
MS.gene32594.t1 MTR_3g032700 29.075 227 121 6 122 311 68 291 9.45e-18 84.7
MS.gene32594.t1 MTR_2g435550 31.839 223 106 10 124 306 94 310 1.30e-17 84.0
MS.gene32594.t1 MTR_4g118340 29.434 265 133 11 122 344 86 338 1.31e-17 84.0
MS.gene32594.t1 MTR_4g120410 27.097 310 169 13 92 350 53 356 1.33e-17 83.6
MS.gene32594.t1 MTR_3g032660 28.384 229 124 6 120 311 66 291 2.79e-17 83.2
MS.gene32594.t1 MTR_7g090530 27.490 251 141 8 122 337 69 313 5.42e-17 82.4
MS.gene32594.t1 MTR_8g074930 26.333 300 156 13 118 361 74 364 7.44e-17 81.6
MS.gene32594.t1 MTR_1g016620 30.045 223 109 8 121 303 67 282 7.59e-17 81.3
MS.gene32594.t1 MTR_7g081020 26.351 296 154 12 121 361 75 361 8.93e-17 81.6
MS.gene32594.t1 MTR_1g116260 26.481 287 149 12 121 351 79 359 1.37e-16 80.9
MS.gene32594.t1 MTR_3g101540 27.881 269 152 9 117 360 59 310 4.03e-16 79.7
MS.gene32594.t1 MTR_1g067210 25.952 289 151 12 118 349 71 353 4.49e-16 79.3
MS.gene32594.t1 MTR_3g101540 27.881 269 152 9 117 360 59 310 4.76e-16 79.7
MS.gene32594.t1 MTR_1g083690 28.400 250 129 10 122 331 89 328 9.05e-16 78.2
MS.gene32594.t1 MTR_5g080680 33.684 190 89 7 90 257 109 283 1.44e-15 76.6
MS.gene32594.t1 MTR_7g081020 27.731 238 122 10 121 319 75 301 2.06e-15 76.6
MS.gene32594.t1 MTR_2g033910 28.627 255 141 10 114 332 66 315 1.10e-14 75.1
MS.gene32594.t1 MTR_5g005810 29.218 243 147 10 122 346 336 571 1.48e-14 75.5
MS.gene32594.t1 MTR_7g080170 35.417 144 69 4 183 308 98 235 3.29e-14 73.9
MS.gene32594.t1 MTR_7g112490 28.195 266 127 11 122 334 91 345 5.00e-14 73.2
MS.gene32594.t1 MTR_7g090550 27.734 256 136 10 122 337 70 316 5.26e-14 73.6
MS.gene32594.t1 MTR_7g112490 28.195 266 127 11 122 334 109 363 5.32e-14 73.2
MS.gene32594.t1 MTR_7g080170 35.417 144 69 4 183 308 206 343 5.83e-14 73.6
MS.gene32594.t1 MTR_2g078760 34.375 128 81 2 113 240 108 232 1.64e-13 70.5
MS.gene32594.t1 MTR_7g070510 27.208 283 146 10 122 350 92 368 1.77e-13 72.0
MS.gene32594.t1 MTR_7g021530 35.172 145 70 5 183 309 140 278 2.50e-13 70.9
MS.gene32594.t1 MTR_7g060770 26.667 225 126 7 121 306 262 486 4.43e-13 70.9
MS.gene32594.t1 MTR_7g021530 35.172 145 70 5 183 309 190 328 7.93e-13 69.7
MS.gene32594.t1 MTR_7g021530 35.172 145 70 5 183 309 231 369 1.11e-12 69.3
MS.gene32594.t1 MTR_1g110210 29.278 263 137 13 121 357 67 306 2.99e-12 67.4
MS.gene32594.t1 MTR_4g094208 35.833 120 74 2 121 240 60 176 3.94e-12 65.5
MS.gene32594.t1 MTR_4g013295 26.991 226 113 8 120 300 76 294 5.88e-11 63.9
MS.gene32594.t1 MTR_7g029240 30.698 215 108 12 117 303 61 262 6.34e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene32594.t1 AT2G25620 66.244 394 117 7 1 381 1 391 0.0 510
MS.gene32594.t1 AT2G25620 66.244 394 117 7 1 381 1 391 0.0 510
MS.gene32594.t1 AT2G33700 55.556 306 131 4 74 378 76 377 1.97e-114 338
MS.gene32594.t1 AT3G51470 52.581 310 138 3 71 380 61 361 1.11e-109 326
MS.gene32594.t1 AT3G51470 52.581 310 138 3 71 380 17 317 1.15e-109 324
MS.gene32594.t1 AT3G62260 48.734 316 145 6 76 378 71 382 5.34e-90 276
MS.gene32594.t1 AT3G62260 48.734 316 145 6 76 378 72 383 6.34e-90 276
MS.gene32594.t1 AT1G48040 46.006 313 156 5 75 377 71 380 1.37e-83 259
MS.gene32594.t1 AT3G62260 48.485 297 136 6 95 378 1 293 1.87e-82 254
MS.gene32594.t1 AT3G17250 42.902 317 163 6 75 378 110 421 1.05e-74 238
MS.gene32594.t1 AT5G24940 36.531 271 146 8 80 346 31 279 3.15e-42 153
MS.gene32594.t1 AT5G10740 37.269 271 144 8 80 346 31 279 6.21e-42 150
MS.gene32594.t1 AT5G10740 37.269 271 144 8 80 346 31 279 6.21e-42 150
MS.gene32594.t1 AT4G31750 36.531 271 146 8 80 346 31 279 6.08e-40 144
MS.gene32594.t1 AT4G31750 36.531 271 146 8 80 346 31 279 6.08e-40 144
MS.gene32594.t1 AT4G31750 36.531 271 146 8 80 346 31 279 6.50e-40 144
MS.gene32594.t1 AT2G25070 28.895 353 179 9 61 358 5 340 6.59e-40 145
MS.gene32594.t1 AT2G25070 28.895 353 179 9 61 358 5 340 6.59e-40 145
MS.gene32594.t1 AT5G53140 33.456 272 155 7 81 348 100 349 1.17e-39 146
MS.gene32594.t1 AT5G53140 33.456 272 155 7 81 348 100 349 1.17e-39 146
MS.gene32594.t1 AT4G31860 29.969 327 161 7 80 351 21 334 5.04e-39 143
MS.gene32594.t1 AT1G78200 35.498 231 133 3 122 347 19 238 1.47e-37 135
MS.gene32594.t1 AT1G78200 35.498 231 133 3 122 347 19 238 1.47e-37 135
MS.gene32594.t1 AT2G20630 33.721 258 143 6 95 347 45 279 2.04e-37 136
MS.gene32594.t1 AT1G78200 35.498 231 133 3 122 347 64 283 3.59e-37 136
MS.gene32594.t1 AT1G78200 35.498 231 133 3 122 347 64 283 3.59e-37 136
MS.gene32594.t1 AT1G78200 35.498 231 133 3 122 347 64 283 3.59e-37 136
MS.gene32594.t1 AT2G20630 33.463 257 143 6 95 346 45 278 3.90e-37 136
MS.gene32594.t1 AT2G30020 36.431 269 140 9 90 348 147 394 8.17e-37 138
MS.gene32594.t1 AT4G28400 34.496 258 141 6 95 347 27 261 9.39e-37 134
MS.gene32594.t1 AT4G28400 34.496 258 141 6 95 347 49 283 1.88e-36 134
MS.gene32594.t1 AT4G31860 31.690 284 131 6 80 313 21 291 6.09e-36 133
MS.gene32594.t1 AT2G40860 32.404 287 158 9 75 347 287 551 7.53e-36 138
MS.gene32594.t1 AT2G40860 32.746 284 155 9 75 344 385 646 9.63e-36 138
MS.gene32594.t1 AT1G43900 34.066 273 151 9 80 347 121 369 2.15e-35 133
MS.gene32594.t1 AT1G18030 31.944 288 152 9 88 348 80 350 3.20e-35 132
MS.gene32594.t1 AT1G07160 35.338 266 140 8 90 344 130 374 9.41e-35 132
MS.gene32594.t1 AT1G22280 35.271 258 139 9 95 347 47 281 1.15e-33 127
MS.gene32594.t1 AT3G15260 34.855 241 136 6 113 347 64 289 1.17e-33 127
MS.gene32594.t1 AT3G15260 34.855 241 136 6 113 347 64 289 1.17e-33 127
MS.gene32594.t1 AT1G34750 34.468 235 134 6 116 344 59 279 6.57e-33 124
MS.gene32594.t1 AT1G34750 34.468 235 134 6 116 344 59 279 6.57e-33 124
MS.gene32594.t1 AT1G34750 34.468 235 134 6 116 344 59 279 6.57e-33 124
MS.gene32594.t1 AT1G67820 38.342 193 100 4 121 306 114 294 3.35e-32 125
MS.gene32594.t1 AT1G67820 38.342 193 100 4 121 306 150 330 4.05e-32 126
MS.gene32594.t1 AT2G40180 34.182 275 148 8 90 351 136 390 4.17e-32 125
MS.gene32594.t1 AT4G31860 30.970 268 122 6 80 297 21 275 2.01e-31 120
MS.gene32594.t1 AT1G22280 34.470 264 139 10 95 347 47 287 3.35e-31 120
MS.gene32594.t1 AT2G40860 31.387 274 152 9 75 334 385 636 5.35e-31 124
MS.gene32594.t1 AT2G29380 32.226 301 147 12 82 344 77 358 1.15e-28 115
MS.gene32594.t1 AT1G07430 31.890 254 144 8 74 310 114 355 1.37e-28 116
MS.gene32594.t1 AT4G26080 30.201 298 152 10 90 344 136 420 3.86e-28 114
MS.gene32594.t1 AT2G34740 31.801 261 146 9 95 348 101 336 6.21e-28 112
MS.gene32594.t1 AT5G51760 30.392 306 152 10 89 344 85 379 9.63e-28 113
MS.gene32594.t1 AT5G51760 30.392 306 152 10 89 344 115 409 1.34e-27 113
MS.gene32594.t1 AT5G59220 35.000 240 122 8 90 310 119 343 4.25e-27 111
MS.gene32594.t1 AT1G18030 31.933 238 119 8 88 299 80 300 4.36e-27 109
MS.gene32594.t1 AT1G72770 29.841 315 159 9 90 349 197 504 2.29e-26 110
MS.gene32594.t1 AT1G72770 29.841 315 159 9 90 349 197 504 2.29e-26 110
MS.gene32594.t1 AT1G72770 29.841 315 159 9 90 349 197 504 2.29e-26 110
MS.gene32594.t1 AT1G17550 28.615 325 163 8 84 349 190 504 2.83e-26 110
MS.gene32594.t1 AT1G17550 28.615 325 163 8 84 349 190 504 2.83e-26 110
MS.gene32594.t1 AT4G27800 27.019 322 178 8 81 361 58 363 3.04e-26 108
MS.gene32594.t1 AT3G11410 32.946 258 132 9 78 310 102 343 3.13e-26 108
MS.gene32594.t1 AT5G57050 29.373 303 153 11 90 344 120 409 3.69e-26 109
MS.gene32594.t1 AT5G57050 29.373 303 153 11 90 344 80 369 3.73e-26 108
MS.gene32594.t1 AT4G28400 34.286 210 114 5 95 299 49 239 6.29e-26 105
MS.gene32594.t1 AT1G34750 33.158 190 111 5 116 299 59 238 2.79e-22 95.1
MS.gene32594.t1 AT2G40860 31.897 232 121 9 75 290 385 595 1.30e-21 97.1
MS.gene32594.t1 AT2G34740 32.075 212 116 8 95 299 97 287 2.11e-21 94.0
MS.gene32594.t1 AT2G34740 32.075 212 116 8 95 299 115 305 2.24e-21 94.4
MS.gene32594.t1 AT4G08260 30.859 256 129 10 95 348 1 210 2.64e-21 91.7
MS.gene32594.t1 AT4G27800 26.531 294 159 8 81 333 58 335 2.16e-20 91.7
MS.gene32594.t1 AT4G27800 27.465 284 148 9 81 322 58 325 7.80e-20 89.7
MS.gene32594.t1 AT5G02760 31.780 236 113 11 121 319 71 295 1.53e-19 89.7
MS.gene32594.t1 AT5G59220 37.097 186 90 7 90 256 119 296 1.03e-18 86.3
MS.gene32594.t1 AT3G12620 28.975 283 140 13 118 344 78 355 2.73e-18 85.9
MS.gene32594.t1 AT3G12620 28.975 283 140 13 118 344 78 355 2.73e-18 85.9
MS.gene32594.t1 AT2G20050 28.625 269 130 9 122 344 143 395 2.74e-17 84.3
MS.gene32594.t1 AT2G20050 28.625 269 130 9 122 344 143 395 2.79e-17 84.3
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 8.61e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 8.61e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 8.61e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 8.69e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 9.56e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 9.56e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 9.56e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 9.56e-17 82.8
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 1.03e-16 82.4
MS.gene32594.t1 AT5G01700 28.315 279 143 11 120 352 27 294 1.14e-16 80.9
MS.gene32594.t1 AT3G63340 29.496 278 122 12 149 366 198 461 1.32e-16 81.6
MS.gene32594.t1 AT4G33920 26.027 292 156 12 114 348 52 340 1.95e-16 80.5
MS.gene32594.t1 AT1G47380 29.104 268 144 10 117 357 57 305 2.40e-16 80.5
MS.gene32594.t1 AT5G01700 28.315 279 143 11 120 352 76 343 3.56e-16 79.7
MS.gene32594.t1 AT3G55050 27.273 286 147 13 118 347 79 359 6.11e-16 79.0
MS.gene32594.t1 AT3G55050 27.273 286 147 13 118 347 79 359 6.11e-16 79.0
MS.gene32594.t1 AT3G16800 31.556 225 112 9 121 310 92 309 6.85e-16 78.6
MS.gene32594.t1 AT3G16800 31.556 225 112 9 121 310 92 309 6.85e-16 78.6
MS.gene32594.t1 AT3G16800 31.556 225 112 9 121 310 92 309 6.85e-16 78.6
MS.gene32594.t1 AT3G16800 37.415 147 67 5 183 310 74 214 7.82e-16 77.0
MS.gene32594.t1 AT3G16800 37.415 147 67 5 183 310 74 214 7.82e-16 77.0
MS.gene32594.t1 AT3G05640 26.756 299 154 13 81 332 48 328 1.98e-15 77.4
MS.gene32594.t1 AT3G05640 26.756 299 154 13 81 332 48 328 1.98e-15 77.4
MS.gene32594.t1 AT3G05640 26.756 299 154 13 81 332 48 328 1.98e-15 77.4
MS.gene32594.t1 AT3G51370 25.088 283 151 11 118 344 74 351 2.29e-15 77.4
MS.gene32594.t1 AT3G51370 25.088 283 151 11 118 344 74 351 2.29e-15 77.4
MS.gene32594.t1 AT3G17090 29.032 248 131 9 121 331 83 322 3.29e-15 77.0
MS.gene32594.t1 AT3G17090 28.926 242 127 9 121 325 83 316 4.11e-15 75.9
MS.gene32594.t1 AT4G38520 25.795 283 153 11 118 346 76 355 4.26e-15 76.6
MS.gene32594.t1 AT4G38520 25.795 283 153 11 118 346 76 355 4.26e-15 76.6
MS.gene32594.t1 AT4G32950 28.641 206 118 6 121 303 71 270 8.14e-15 75.1
MS.gene32594.t1 AT3G63320 28.571 273 119 12 151 357 52 314 1.34e-14 75.1
MS.gene32594.t1 AT1G09160 30.315 254 132 11 117 344 61 295 1.52e-14 75.1
MS.gene32594.t1 AT1G09160 30.315 254 132 11 117 344 61 295 1.52e-14 75.1
MS.gene32594.t1 AT5G27930 27.600 250 115 11 107 308 82 313 2.37e-14 74.3
MS.gene32594.t1 AT5G27930 27.600 250 115 11 107 308 82 313 2.37e-14 74.3
MS.gene32594.t1 AT5G57050 30.256 195 104 8 90 258 120 308 2.95e-14 73.2
MS.gene32594.t1 AT3G63320 26.706 337 134 14 124 357 71 397 3.48e-14 73.9
MS.gene32594.t1 AT1G72770 31.220 205 103 6 90 256 197 401 5.38e-14 73.2
MS.gene32594.t1 AT1G72770 31.220 205 103 6 90 256 197 401 5.38e-14 73.2
MS.gene32594.t1 AT1G22280 35.616 146 82 5 95 240 47 180 1.17e-13 69.7
MS.gene32594.t1 AT5G66080 26.855 283 146 11 118 344 77 354 1.35e-13 72.0
MS.gene32594.t1 AT5G26010 26.493 268 148 10 124 353 75 331 2.62e-13 70.9
MS.gene32594.t1 AT3G63340 33.918 171 84 8 212 366 337 494 4.71e-13 71.2
MS.gene32594.t1 AT1G79630 32.275 189 91 8 183 346 111 287 7.72e-13 69.7
MS.gene32594.t1 AT1G79630 32.275 189 91 8 183 346 111 287 7.72e-13 69.7
MS.gene32594.t1 AT1G79630 32.275 189 91 8 183 346 111 287 7.72e-13 69.7
MS.gene32594.t1 AT1G79630 32.275 189 91 8 183 346 111 287 7.72e-13 69.7
MS.gene32594.t1 AT1G79630 32.292 192 93 8 183 349 151 330 9.18e-13 69.7
MS.gene32594.t1 AT1G79630 32.292 192 93 8 183 349 151 330 9.18e-13 69.7
MS.gene32594.t1 AT1G16220 29.515 227 119 10 148 346 161 374 1.25e-12 69.3
MS.gene32594.t1 AT1G79630 32.275 189 91 8 183 346 217 393 1.30e-12 69.3
MS.gene32594.t1 AT1G79630 32.275 189 91 8 183 346 221 397 1.37e-12 69.3
MS.gene32594.t1 AT5G06750 25.357 280 152 10 120 344 80 357 1.87e-12 68.6
MS.gene32594.t1 AT5G06750 25.357 280 152 10 120 344 80 357 1.87e-12 68.6
MS.gene32594.t1 AT5G19280 27.419 248 147 10 123 346 339 577 3.23e-12 68.6
MS.gene32594.t1 AT3G02750 34.507 142 69 5 183 306 215 350 5.00e-12 67.8
MS.gene32594.t1 AT3G02750 34.507 142 69 5 183 306 215 350 5.00e-12 67.8
MS.gene32594.t1 AT4G32950 28.141 199 114 6 121 296 71 263 1.03e-11 65.5
MS.gene32594.t1 AT3G16560 29.054 148 83 4 181 306 273 420 2.65e-11 65.5
MS.gene32594.t1 AT3G16560 29.054 148 83 4 181 306 273 420 2.65e-11 65.5
MS.gene32594.t1 AT3G16560 29.054 148 83 4 181 306 273 420 2.65e-11 65.5
MS.gene32594.t1 AT3G16560 29.054 148 83 4 181 306 273 420 2.66e-11 65.5

Find 95 sgRNAs with CRISPR-Local

Find 175 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAGCAGCCTCCACCAAATT+TGG 0.216972 3.1:-85329201 MS.gene32594:CDS
GCGCAAAATCTACAGCATTT+TGG 0.230172 3.1:+85329336 None:intergenic
TCATAGGCTGCGATGGGATT+TGG 0.232647 3.1:-85329373 MS.gene32594:CDS
GCATTGGCTACTCTTGTTAT+AGG 0.258949 3.1:-85329943 MS.gene32594:CDS
CTTAATGTTGCTCGAGCTAT+TGG 0.303340 3.1:-85329497 MS.gene32594:CDS
CATAGGCTGCGATGGGATTT+GGG 0.327999 3.1:-85329372 MS.gene32594:CDS
GATGGACCGAGTGCTTTCTA+TGG 0.328546 3.1:-85330546 MS.gene32594:CDS
TATCGGGTTCCGGTCAAATA+TGG 0.330817 3.1:-85330631 MS.gene32594:CDS
AGTTTCTGACTGTAGGTTGC+TGG 0.335395 3.1:-85329672 MS.gene32594:intron
TCCGGAGGATGTGCTGATAT+CGG 0.336894 3.1:-85330648 MS.gene32594:CDS
GAGCGTGGTGCTACCAAATT+TGG 0.350164 3.1:+85329188 None:intergenic
CTCAATAAACAACTTATAGA+TGG 0.363410 3.1:-85330564 MS.gene32594:CDS
GCAATGGATGGATTAGGATT+TGG 0.372864 3.1:+85331365 None:intergenic
GTCTATGATGGATATCTTAA+CGG 0.377116 3.1:-85329524 MS.gene32594:CDS
CAGAGGCGTATCGAGGCATC+TGG 0.390804 3.1:-85329554 MS.gene32594:CDS
CATCCTCCGGAACGGAGCTT+TGG 0.398949 3.1:+85330660 None:intergenic
CTTTCATGCAACCTGGTTTG+TGG 0.400398 3.1:+85329579 None:intergenic
TTCCTTCCAAAGCTCCGTTC+CGG 0.404057 3.1:-85330666 MS.gene32594:CDS
GCAGAAGCAATGGATGGATT+AGG 0.405446 3.1:+85331359 None:intergenic
CTCTGCTCTTTCATGCAACC+TGG 0.407237 3.1:+85329572 None:intergenic
TGACTGTAGGTTGCTGGTGG+TGG 0.438915 3.1:-85329666 MS.gene32594:intron
TGGCTTGGTCAGGTGTTTGA+TGG 0.441121 3.1:-85330141 MS.gene32594:intron
CCGGAGGATGTGCTGATATC+GGG 0.442854 3.1:-85330647 MS.gene32594:CDS
AGAGGCGTATCGAGGCATCT+GGG 0.450237 3.1:-85329553 MS.gene32594:CDS
CTCAATGCTGCCCTTGCATC+CGG 0.452615 3.1:-85329973 MS.gene32594:CDS
TTGCTGGTGGTGGCAAATGC+TGG 0.454788 3.1:-85329656 MS.gene32594:CDS
ATGCAGTGGTGCCGGATGCA+AGG 0.459353 3.1:+85329962 None:intergenic
GCAAACAGACTATGCATTTG+CGG 0.463349 3.1:-85330007 MS.gene32594:CDS
TGCATCCGGCACCACTGCAT+TGG 0.476188 3.1:-85329959 MS.gene32594:CDS
TCTATGATGGATATCTTAAC+GGG 0.479521 3.1:-85329523 MS.gene32594:CDS
TGCAGTGGTGCCGGATGCAA+GGG 0.482277 3.1:+85329963 None:intergenic
AGCTGTATGCAGTAAGGATC+TGG 0.483557 3.1:-85329285 MS.gene32594:CDS
GATGTGCTGATATCGGGTTC+CGG 0.494574 3.1:-85330641 MS.gene32594:CDS
CCCGATATCAGCACATCCTC+CGG 0.497125 3.1:+85330647 None:intergenic
AGATCCTTACTGCATACAGC+TGG 0.500453 3.1:+85329287 None:intergenic
TAAGTTGTTTATTGAGCCCA+TGG 0.501821 3.1:+85330571 None:intergenic
TTATCCTCGAGAATGAACTT+TGG 0.503539 3.1:+85330075 None:intergenic
AGTAGCCAATGCAGTGGTGC+CGG 0.504279 3.1:+85329954 None:intergenic
ACTATCCTTTCAATATCCAC+TGG 0.504474 3.1:+85330045 None:intergenic
CACAGGAGCTTCTCTGCTGA+AGG 0.507072 3.1:-85329158 MS.gene32594:CDS
GAGGATGAATTTCTCATCAT+AGG 0.512658 3.1:-85329389 MS.gene32594:CDS
AGGCGTATCGAGGCATCTGG+GGG 0.513077 3.1:-85329551 MS.gene32594:CDS
ATGGACCGAGTGCTTTCTAT+GGG 0.513585 3.1:-85330545 MS.gene32594:CDS
TTTCTCATCATAGGCTGCGA+TGG 0.526199 3.1:-85329380 MS.gene32594:CDS
ATGGATGGATTAGGATTTGG+AGG 0.527042 3.1:+85331368 None:intergenic
TTCTCATCATAGGCTGCGAT+GGG 0.530891 3.1:-85329379 MS.gene32594:CDS
GAAGGAATGAAAGGCAAAGA+TGG 0.533012 3.1:-85329461 MS.gene32594:CDS
TGCATAGTCTGTTTGCAGAA+AGG 0.536620 3.1:+85330014 None:intergenic
CGACCCAGCTGTATGCAGTA+AGG 0.541516 3.1:-85329291 MS.gene32594:CDS
ATTTCCCAGTGGATATTGAA+AGG 0.550709 3.1:-85330050 MS.gene32594:CDS
CTTCCAAAGCTCCGTTCCGG+AGG 0.555450 3.1:-85330663 MS.gene32594:CDS
CGTGGTGCTACCAAATTTGG+TGG 0.556204 3.1:+85329191 None:intergenic
TGGCTACTCTTGTTATAGGA+AGG 0.559140 3.1:-85329939 MS.gene32594:intron
GAGGCGTATCGAGGCATCTG+GGG 0.559861 3.1:-85329552 MS.gene32594:CDS
CTATCCTTTCAATATCCACT+GGG 0.563023 3.1:+85330046 None:intergenic
ATGTCAAGAGACCACAAACC+AGG 0.567267 3.1:-85329590 MS.gene32594:CDS
AGAGAAGCTCCTGTGCACTC+TGG 0.567952 3.1:+85329166 None:intergenic
TGGCACATGGAAGGAATGAA+AGG 0.568858 3.1:-85329470 MS.gene32594:CDS
GGTCAGGTGTTTGATGGACA+CGG 0.571598 3.1:-85330135 MS.gene32594:intron
TTTCTGCATGGTAAAACAAG+AGG 0.572653 3.1:+85331311 None:intergenic
ATTGGTGACTGGCACATGGA+AGG 0.574252 3.1:-85329479 MS.gene32594:CDS
CTCCGGAACGGAGCTTTGGA+AGG 0.575225 3.1:+85330664 None:intergenic
TTCTGACTGTAGGTTGCTGG+TGG 0.579507 3.1:-85329669 MS.gene32594:intron
CGAAAAGCAGAAGCAATGGA+TGG 0.580021 3.1:+85331353 None:intergenic
TTGCTCGAGCTATTGGTGAC+TGG 0.582496 3.1:-85329490 MS.gene32594:CDS
CTCCTGTGCACTCTGGAGCG+TGG 0.585430 3.1:+85329173 None:intergenic
ACACATCCTCCATATTTGAC+CGG 0.585526 3.1:+85330622 None:intergenic
AGACAATTTAGCTGTTGTTG+TGG 0.586656 3.1:-85329234 MS.gene32594:CDS
TTTGCCAAAGTTCATTCTCG+AGG 0.590449 3.1:-85330079 MS.gene32594:CDS
CAGTAAGGATCTGGTTGATG+AGG 0.591652 3.1:-85329276 MS.gene32594:CDS
TTGACGAAAAGCAGAAGCAA+TGG 0.595015 3.1:+85331349 None:intergenic
CGAGCAGTGCTGTGCCGTCG+TGG 0.598079 3.1:-85329626 MS.gene32594:CDS
AGCTATTGGTGACTGGCACA+TGG 0.600561 3.1:-85329483 MS.gene32594:CDS
CACCACGCTCCAGAGTGCAC+AGG 0.602591 3.1:-85329175 MS.gene32594:CDS
GCTTTGGAAGGAAATCAGAC+TGG 0.619255 3.1:+85330676 None:intergenic
GGTGCTACCAAATTTGGTGG+AGG 0.621044 3.1:+85329194 None:intergenic
CGGGTTCCGGTCAAATATGG+AGG 0.621074 3.1:-85330628 MS.gene32594:CDS
GGAATGAAAGGCAAAGATGG+TGG 0.624005 3.1:-85329458 MS.gene32594:CDS
GACTACAAAACTTACTGCCG+AGG 0.624751 3.1:-85329408 MS.gene32594:CDS
AGTTCAGGCTCTGCACTGAG+TGG 0.625933 3.1:+85329434 None:intergenic
TATGATGAGAAATTCATCCT+CGG 0.640171 3.1:+85329391 None:intergenic
GATCCTTACTGCATACAGCT+GGG 0.642529 3.1:+85329288 None:intergenic
GGTGTGAATTGTTTCAGTGA+AGG 0.642841 3.1:-85331413 MS.gene32594:CDS
TATCAGCACATCCTCCGGAA+CGG 0.646071 3.1:+85330652 None:intergenic
GAAAGAGCAGAGGCGTATCG+AGG 0.646196 3.1:-85329561 MS.gene32594:CDS
TCTGTTGAGGATGTTACTGA+AGG 0.648815 3.1:-85330702 MS.gene32594:CDS
CAGGTTGCATGAAAGAGCAG+AGG 0.671998 3.1:-85329571 MS.gene32594:CDS
TATACCCCATAGAAAGCACT+CGG 0.672295 3.1:+85330540 None:intergenic
AACAAGAGTAGCCAATGCAG+TGG 0.673761 3.1:+85329948 None:intergenic
GTTGTCTGATGCATCTGTTG+AGG 0.696072 3.1:-85330715 MS.gene32594:CDS
GGCGTATCGAGGCATCTGGG+GGG 0.697326 3.1:-85329550 MS.gene32594:CDS
GGTTTCTTACAAGAGAAGCG+TGG 0.710252 3.1:+85331276 None:intergenic
CGAGGATAAAGATTTCCCAG+TGG 0.737162 3.1:-85330061 MS.gene32594:CDS
TGGACCGAGTGCTTTCTATG+GGG 0.737710 3.1:-85330544 MS.gene32594:intron
CAGGTGTTTGATGGACACGG+CGG 0.806389 3.1:-85330132 MS.gene32594:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTGATATTCAATAATTT+GGG - chr3.1:85330632-85330651 MS.gene32594:CDS 10.0%
!! ATTTAATGTAGATAAAAACT+AGG - chr3.1:85329499-85329518 MS.gene32594:CDS 15.0%
!! GCTAATTTATAGTAAAAAAA+AGG + chr3.1:85330665-85330684 None:intergenic 15.0%
!!! GATTTTGATATTCAATAATT+TGG - chr3.1:85330631-85330650 MS.gene32594:CDS 15.0%
!! ATAATCAATAATCAATCCTA+AGG + chr3.1:85329676-85329695 None:intergenic 20.0%
!! CAAAAGAAAAAACAAAAGAT+CGG + chr3.1:85329291-85329310 None:intergenic 20.0%
!! GAAATGAAATGAAATAATGA+TGG - chr3.1:85329555-85329574 MS.gene32594:CDS 20.0%
!! GATATGATAGTTGTTAAAAT+GGG - chr3.1:85330058-85330077 MS.gene32594:CDS 20.0%
!! TGATATGATAGTTGTTAAAA+TGG - chr3.1:85330057-85330076 MS.gene32594:CDS 20.0%
!!! ATAATGATGTTACTTAGTTT+TGG - chr3.1:85329339-85329358 MS.gene32594:CDS 20.0%
!!! TAATTGTTGATTATGTTTTG+TGG - chr3.1:85329637-85329656 MS.gene32594:CDS 20.0%
!!! TAGGATTGATTATTGATTAT+TGG - chr3.1:85329676-85329695 MS.gene32594:intron 20.0%
!!! TGCTAATCTTATTTTGTAAT+TGG - chr3.1:85330214-85330233 MS.gene32594:intron 20.0%
! AGAATGTGTAATTTAAGCTT+TGG - chr3.1:85329470-85329489 MS.gene32594:CDS 25.0%
! ATGAAATGAAATAATGATGG+CGG - chr3.1:85329558-85329577 MS.gene32594:CDS 25.0%
! CTCAATAAACAACTTATAGA+TGG - chr3.1:85329979-85329998 MS.gene32594:CDS 25.0%
! TAATATGTGTTTATGCACAT+TGG + chr3.1:85330263-85330282 None:intergenic 25.0%
! TACAAAATAAGATTAGCATG+TGG + chr3.1:85330212-85330231 None:intergenic 25.0%
! TGACAAATGGAAAGAAAAAA+AGG + chr3.1:85329437-85329456 None:intergenic 25.0%
! TTACTATAAATTAGCACCAA+AGG - chr3.1:85330670-85330689 MS.gene32594:CDS 25.0%
!!! ATGTTTGTGTTGACAATTTT+AGG - chr3.1:85329944-85329963 MS.gene32594:CDS 25.0%
!!! ATTGATTATTGGTGTTAGTA+GGG - chr3.1:85329687-85329706 MS.gene32594:intron 25.0%
!!! TATTGATTATTGGTGTTAGT+AGG - chr3.1:85329686-85329705 MS.gene32594:intron 25.0%
AAAAACTCCATAGCTAGTAA+AGG + chr3.1:85330292-85330311 None:intergenic 30.0%
AAAACTAGGACTAGAATAGA+AGG - chr3.1:85329513-85329532 MS.gene32594:CDS 30.0%
AAAAGACATAAATCTGACTG+AGG - chr3.1:85330731-85330750 MS.gene32594:CDS 30.0%
AAAAGAGAATAACGACACAT+GGG + chr3.1:85330112-85330131 None:intergenic 30.0%
AAGTAACGTTATATGTCGAA+TGG - chr3.1:85330382-85330401 MS.gene32594:intron 30.0%
AATGAAAGAAGACAAAACGA+AGG + chr3.1:85330135-85330154 None:intergenic 30.0%
AGAGCATGAAAATGGAAATA+TGG + chr3.1:85330791-85330810 None:intergenic 30.0%
CAAGAAATTTAGCATACCTT+TGG + chr3.1:85330689-85330708 None:intergenic 30.0%
CAGTTGACAAGAATAGATAT+AGG - chr3.1:85330313-85330332 MS.gene32594:intron 30.0%
GAGCATGAAAATGGAAATAT+GGG + chr3.1:85330790-85330809 None:intergenic 30.0%
TATGATGAGAAATTCATCCT+CGG + chr3.1:85331155-85331174 None:intergenic 30.0%
TGAAATGAAATAATGATGGC+GGG - chr3.1:85329559-85329578 MS.gene32594:CDS 30.0%
!! GTCTATGATGGATATCTTAA+CGG - chr3.1:85331019-85331038 MS.gene32594:intron 30.0%
!! TCTATGATGGATATCTTAAC+GGG - chr3.1:85331020-85331039 MS.gene32594:intron 30.0%
AAAGAGAATAACGACACATG+GGG + chr3.1:85330111-85330130 None:intergenic 35.0%
AATTGGTACTGCTTTACCTT+TGG - chr3.1:85330231-85330250 MS.gene32594:intron 35.0%
ACATAAATCTGACTGAGGTT+TGG - chr3.1:85330736-85330755 MS.gene32594:intron 35.0%
ACTATCCTTTCAATATCCAC+TGG + chr3.1:85330501-85330520 None:intergenic 35.0%
AGACAATTTAGCTGTTGTTG+TGG - chr3.1:85331309-85331328 MS.gene32594:CDS 35.0%
AGTACTCCAATCAAGATAAG+CGG + chr3.1:85330038-85330057 None:intergenic 35.0%
ATTTCCCAGTGGATATTGAA+AGG - chr3.1:85330493-85330512 MS.gene32594:intron 35.0%
CACTACATGAAAGTGACAAA+TGG + chr3.1:85329450-85329469 None:intergenic 35.0%
CATAAATCTGACTGAGGTTT+GGG - chr3.1:85330737-85330756 MS.gene32594:intron 35.0%
CTATCCTTTCAATATCCACT+GGG + chr3.1:85330500-85330519 None:intergenic 35.0%
GAAAAGAGAATAACGACACA+TGG + chr3.1:85330113-85330132 None:intergenic 35.0%
GAGGATGAATTTCTCATCAT+AGG - chr3.1:85331154-85331173 MS.gene32594:intron 35.0%
TAAGTTGTTTATTGAGCCCA+TGG + chr3.1:85329975-85329994 None:intergenic 35.0%
TGATTGTAGTTTCTGACTGT+AGG - chr3.1:85330864-85330883 MS.gene32594:intron 35.0%
TGTATTTGATGTCATGTCAG+AGG + chr3.1:85330815-85330834 None:intergenic 35.0%
TTATCCTCGAGAATGAACTT+TGG + chr3.1:85330471-85330490 None:intergenic 35.0%
TTGTACTTGTCCAAAAAACG+CGG + chr3.1:85330713-85330732 None:intergenic 35.0%
TTTCTGCATGGTAAAACAAG+AGG + chr3.1:85329235-85329254 None:intergenic 35.0%
! AAAATGCTGTAGATTTTGCG+CGG - chr3.1:85331209-85331228 MS.gene32594:intron 35.0%
! CAAAGCTTTTTGGATAGCTT+GGG - chr3.1:85331421-85331440 MS.gene32594:CDS 35.0%
! GAAAGAGTTGCAAAGCTTTT+TGG - chr3.1:85331411-85331430 MS.gene32594:CDS 35.0%
! TTTTGGTCTGCTACAAAAGT+TGG - chr3.1:85330764-85330783 MS.gene32594:intron 35.0%
!! AGTTTTGTAGTCATGAGTTC+AGG + chr3.1:85331127-85331146 None:intergenic 35.0%
!! TGTGTTGACAATTTTAGGCA+GGG - chr3.1:85329949-85329968 MS.gene32594:CDS 35.0%
!! TTGTGTTGACAATTTTAGGC+AGG - chr3.1:85329948-85329967 MS.gene32594:CDS 35.0%
!!! AATTTCTTGTCCGCGTTTTT+TGG - chr3.1:85330700-85330719 MS.gene32594:CDS 35.0%
ACACATCCTCCATATTTGAC+CGG + chr3.1:85329924-85329943 None:intergenic 40.0%
ACGTTATATGTCGAATGGCT+TGG - chr3.1:85330387-85330406 MS.gene32594:intron 40.0%
CTTAATGTTGCTCGAGCTAT+TGG - chr3.1:85331046-85331065 MS.gene32594:intron 40.0%
GAACTTCCAAAAGATGCCAT+CGG + chr3.1:85330174-85330193 None:intergenic 40.0%
GAAGGAATGAAAGGCAAAGA+TGG - chr3.1:85331082-85331101 MS.gene32594:intron 40.0%
GCAAACAGACTATGCATTTG+CGG - chr3.1:85330536-85330555 MS.gene32594:intron 40.0%
GGTGTGAATTGTTTCAGTGA+AGG - chr3.1:85329130-85329149 MS.gene32594:CDS 40.0%
TCTGTTGAGGATGTTACTGA+AGG - chr3.1:85329841-85329860 MS.gene32594:intron 40.0%
TGCATAGTCTGTTTGCAGAA+AGG + chr3.1:85330532-85330551 None:intergenic 40.0%
TGGATTCAGTTTGCAACCTT+AGG - chr3.1:85329657-85329676 MS.gene32594:CDS 40.0%
TTGACGAAAAGCAGAAGCAA+TGG + chr3.1:85329197-85329216 None:intergenic 40.0%
TTTGCCAAAGTTCATTCTCG+AGG - chr3.1:85330464-85330483 MS.gene32594:intron 40.0%
! ACTCTTGTTATAGGAAGGTC+AGG - chr3.1:85330609-85330628 MS.gene32594:CDS 40.0%
! CGAACAAGAGATTTTCTGCA+TGG + chr3.1:85329247-85329266 None:intergenic 40.0%
! GCAAAGCTTTTTGGATAGCT+TGG - chr3.1:85331420-85331439 MS.gene32594:CDS 40.0%
! GCGCAAAATCTACAGCATTT+TGG + chr3.1:85331210-85331229 None:intergenic 40.0%
! GGTGTTAGTAGGGTTATTTC+TGG - chr3.1:85329697-85329716 MS.gene32594:intron 40.0%
! TCAGAGGAAGAGCATGAAAA+TGG + chr3.1:85330799-85330818 None:intergenic 40.0%
! TGGCTACTCTTGTTATAGGA+AGG - chr3.1:85330604-85330623 MS.gene32594:CDS 40.0%
!! ACTGAGGTTTGGGATCTTTT+TGG - chr3.1:85330747-85330766 MS.gene32594:intron 40.0%
!! ATGGATGGATTAGGATTTGG+AGG + chr3.1:85329178-85329197 None:intergenic 40.0%
!! GAGGCTTTGAAGAGAAAAAG+TGG - chr3.1:85331286-85331305 MS.gene32594:CDS 40.0%
!! GCAATGGATGGATTAGGATT+TGG + chr3.1:85329181-85329200 None:intergenic 40.0%
!! GCATTGGCTACTCTTGTTAT+AGG - chr3.1:85330600-85330619 MS.gene32594:CDS 40.0%
!! TATACCCCATAGAAAGCACT+CGG + chr3.1:85330006-85330025 None:intergenic 40.0%
!!! GAAATAATGATGGCGGGTTT+TGG - chr3.1:85329565-85329584 MS.gene32594:CDS 40.0%
!!! GGTTTTGGTTTGGTCAGATT+GGG - chr3.1:85329580-85329599 MS.gene32594:CDS 40.0%
!!! GTTTTGGTTTGGTCAGATTG+GGG - chr3.1:85329581-85329600 MS.gene32594:CDS 40.0%
AACAAGAGTAGCCAATGCAG+TGG + chr3.1:85330598-85330617 None:intergenic 45.0%
AGACGTGCCTTTACTAGCTA+TGG - chr3.1:85330282-85330301 MS.gene32594:intron 45.0%
AGATCCTTACTGCATACAGC+TGG + chr3.1:85331259-85331278 None:intergenic 45.0%
AGCTGTATGCAGTAAGGATC+TGG - chr3.1:85331258-85331277 MS.gene32594:intron 45.0%
AGTTTCTGACTGTAGGTTGC+TGG - chr3.1:85330871-85330890 MS.gene32594:intron 45.0%
ATGGACCGAGTGCTTTCTAT+GGG - chr3.1:85329998-85330017 MS.gene32594:CDS 45.0%
ATGTCAAGAGACCACAAACC+AGG - chr3.1:85330953-85330972 MS.gene32594:intron 45.0%
CGAAAAGCAGAAGCAATGGA+TGG + chr3.1:85329193-85329212 None:intergenic 45.0%
CGAGGATAAAGATTTCCCAG+TGG - chr3.1:85330482-85330501 MS.gene32594:intron 45.0%
CTCTCTCCGCTTATCTTGAT+TGG - chr3.1:85330029-85330048 MS.gene32594:CDS 45.0%
GACTACAAAACTTACTGCCG+AGG - chr3.1:85331135-85331154 MS.gene32594:intron 45.0%
GATCCTTACTGCATACAGCT+GGG + chr3.1:85331258-85331277 None:intergenic 45.0%
GGAATGAAAGGCAAAGATGG+TGG - chr3.1:85331085-85331104 MS.gene32594:intron 45.0%
GGTTTCTTACAAGAGAAGCG+TGG + chr3.1:85329270-85329289 None:intergenic 45.0%
GTACTGCTTTACCTTTGGTG+TGG - chr3.1:85330236-85330255 MS.gene32594:intron 45.0%
GTTGTCTGATGCATCTGTTG+AGG - chr3.1:85329828-85329847 MS.gene32594:intron 45.0%
TATCGGGTTCCGGTCAAATA+TGG - chr3.1:85329912-85329931 MS.gene32594:intron 45.0%
TGGCACATGGAAGGAATGAA+AGG - chr3.1:85331073-85331092 MS.gene32594:intron 45.0%
TTCTCATCATAGGCTGCGAT+GGG - chr3.1:85331164-85331183 MS.gene32594:intron 45.0%
TTTCTCATCATAGGCTGCGA+TGG - chr3.1:85331163-85331182 MS.gene32594:intron 45.0%
! ACAATTTTAGGCAGGGCCAT+GGG - chr3.1:85329956-85329975 MS.gene32594:CDS 45.0%
! CAGTAAGGATCTGGTTGATG+AGG - chr3.1:85331267-85331286 MS.gene32594:intron 45.0%
! CTTTCATGCAACCTGGTTTG+TGG + chr3.1:85330967-85330986 None:intergenic 45.0%
! GCAGAAGCAATGGATGGATT+AGG + chr3.1:85329187-85329206 None:intergenic 45.0%
!! ATATGTCGAATGGCTTGGTC+AGG - chr3.1:85330392-85330411 MS.gene32594:intron 45.0%
!! GCTTTGGAAGGAAATCAGAC+TGG + chr3.1:85329870-85329889 None:intergenic 45.0%
!! TGTCGATTGCTTTTCCACGA+CGG + chr3.1:85330934-85330953 None:intergenic 45.0%
!!! AATGATGGCGGGTTTTGGTT+TGG - chr3.1:85329570-85329589 MS.gene32594:CDS 45.0%
!!! GGGTTTTGGTTTGGTCAGAT+TGG - chr3.1:85329579-85329598 MS.gene32594:CDS 45.0%
CAGGTTGCATGAAAGAGCAG+AGG - chr3.1:85330972-85330991 MS.gene32594:intron 50.0%
CATAGGCTGCGATGGGATTT+GGG - chr3.1:85331171-85331190 MS.gene32594:intron 50.0%
CTCTGCTCTTTCATGCAACC+TGG + chr3.1:85330974-85330993 None:intergenic 50.0%
GATGGACCGAGTGCTTTCTA+TGG - chr3.1:85329997-85330016 MS.gene32594:CDS 50.0%
TATCAGCACATCCTCCGGAA+CGG + chr3.1:85329894-85329913 None:intergenic 50.0%
TCATAGGCTGCGATGGGATT+TGG - chr3.1:85331170-85331189 MS.gene32594:intron 50.0%
TGCACATTGGTCCACACCAA+AGG + chr3.1:85330250-85330269 None:intergenic 50.0%
TGGACCGAGTGCTTTCTATG+GGG - chr3.1:85329999-85330018 MS.gene32594:CDS 50.0%
TTCCTTCCAAAGCTCCGTTC+CGG - chr3.1:85329877-85329896 MS.gene32594:intron 50.0%
TTCTGACTGTAGGTTGCTGG+TGG - chr3.1:85330874-85330893 MS.gene32594:intron 50.0%
! AGCTATTGGTGACTGGCACA+TGG - chr3.1:85331060-85331079 MS.gene32594:intron 50.0%
! ATTGGTGACTGGCACATGGA+AGG - chr3.1:85331064-85331083 MS.gene32594:intron 50.0%
! GACAATTTTAGGCAGGGCCA+TGG - chr3.1:85329955-85329974 MS.gene32594:CDS 50.0%
! GATGTGCTGATATCGGGTTC+CGG - chr3.1:85329902-85329921 MS.gene32594:intron 50.0%
! GCACATCCGATGGCATCTTT+TGG - chr3.1:85330165-85330184 MS.gene32594:intron 50.0%
! GGTCAGGTGTTTGATGGACA+CGG - chr3.1:85330408-85330427 MS.gene32594:intron 50.0%
! GGTGCTACCAAATTTGGTGG+AGG + chr3.1:85331352-85331371 None:intergenic 50.0%
! TCCGGAGGATGTGCTGATAT+CGG - chr3.1:85329895-85329914 MS.gene32594:intron 50.0%
! TTGCTCGAGCTATTGGTGAC+TGG - chr3.1:85331053-85331072 MS.gene32594:intron 50.0%
!! CGTGGTGCTACCAAATTTGG+TGG + chr3.1:85331355-85331374 None:intergenic 50.0%
!! GAGCGTGGTGCTACCAAATT+TGG + chr3.1:85331358-85331377 None:intergenic 50.0%
!! TGGCTTGGTCAGGTGTTTGA+TGG - chr3.1:85330402-85330421 MS.gene32594:intron 50.0%
AGAGAAGCTCCTGTGCACTC+TGG + chr3.1:85331380-85331399 None:intergenic 55.0%
AGTAGCCAATGCAGTGGTGC+CGG + chr3.1:85330592-85330611 None:intergenic 55.0%
AGTTCAGGCTCTGCACTGAG+TGG + chr3.1:85331112-85331131 None:intergenic 55.0%
CACAGGAGCTTCTCTGCTGA+AGG - chr3.1:85331385-85331404 MS.gene32594:CDS 55.0%
CCCGATATCAGCACATCCTC+CGG + chr3.1:85329899-85329918 None:intergenic 55.0%
CGACCCAGCTGTATGCAGTA+AGG - chr3.1:85331252-85331271 MS.gene32594:intron 55.0%
CGGGTTCCGGTCAAATATGG+AGG - chr3.1:85329915-85329934 MS.gene32594:intron 55.0%
CTCAATGCTGCCCTTGCATC+CGG - chr3.1:85330570-85330589 MS.gene32594:CDS 55.0%
CTCCTGTTCTGCACATCCGA+TGG - chr3.1:85330155-85330174 MS.gene32594:intron 55.0%
GCAGCAGCCTCCACCAAATT+TGG - chr3.1:85331342-85331361 MS.gene32594:CDS 55.0%
TCTGGGGGGTCTGTCTATGA+TGG - chr3.1:85331007-85331026 MS.gene32594:intron 55.0%
TGACTGTAGGTTGCTGGTGG+TGG - chr3.1:85330877-85330896 MS.gene32594:intron 55.0%
TGCCATCGGATGTGCAGAAC+AGG + chr3.1:85330160-85330179 None:intergenic 55.0%
! AGAGGCGTATCGAGGCATCT+GGG - chr3.1:85330990-85331009 MS.gene32594:intron 55.0%
! CAGGTGTTTGATGGACACGG+CGG - chr3.1:85330411-85330430 MS.gene32594:intron 55.0%
! CCGGAGGATGTGCTGATATC+GGG - chr3.1:85329896-85329915 MS.gene32594:intron 55.0%
! GAAAGAGCAGAGGCGTATCG+AGG - chr3.1:85330982-85331001 MS.gene32594:intron 55.0%
!! TTGCTGGTGGTGGCAAATGC+TGG - chr3.1:85330887-85330906 MS.gene32594:intron 55.0%
CATCCTCCGGAACGGAGCTT+TGG + chr3.1:85329886-85329905 None:intergenic 60.0%
CTTCCAAAGCTCCGTTCCGG+AGG - chr3.1:85329880-85329899 MS.gene32594:intron 60.0%
TGCATCCGGCACCACTGCAT+TGG - chr3.1:85330584-85330603 MS.gene32594:CDS 60.0%
! AGGCGTATCGAGGCATCTGG+GGG - chr3.1:85330992-85331011 MS.gene32594:intron 60.0%
! ATGCAGTGGTGCCGGATGCA+AGG + chr3.1:85330584-85330603 None:intergenic 60.0%
! CAGAGGCGTATCGAGGCATC+TGG - chr3.1:85330989-85331008 MS.gene32594:intron 60.0%
! CTGTAGATTTTGCGCGGCGC+AGG - chr3.1:85331215-85331234 MS.gene32594:intron 60.0%
! GAGGCGTATCGAGGCATCTG+GGG - chr3.1:85330991-85331010 MS.gene32594:intron 60.0%
! TGCAGTGGTGCCGGATGCAA+GGG + chr3.1:85330583-85330602 None:intergenic 60.0%
!! CTCCGGAACGGAGCTTTGGA+AGG + chr3.1:85329882-85329901 None:intergenic 60.0%
CACCACGCTCCAGAGTGCAC+AGG - chr3.1:85331368-85331387 MS.gene32594:CDS 65.0%
! GGCGTATCGAGGCATCTGGG+GGG - chr3.1:85330993-85331012 MS.gene32594:intron 65.0%
! TTTTGCGCGGCGCAGGCTTC+AGG - chr3.1:85331222-85331241 MS.gene32594:intron 65.0%
!! CTCCTGTGCACTCTGGAGCG+TGG + chr3.1:85331373-85331392 None:intergenic 65.0%
CGAGCAGTGCTGTGCCGTCG+TGG - chr3.1:85330917-85330936 MS.gene32594:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 85329115 85331450 85329115 ID=MS.gene32594
chr3.1 mRNA 85329115 85331450 85329115 ID=MS.gene32594.t1;Parent=MS.gene32594
chr3.1 exon 85331286 85331450 85331286 ID=MS.gene32594.t1.exon1;Parent=MS.gene32594.t1
chr3.1 CDS 85331286 85331450 85331286 ID=cds.MS.gene32594.t1;Parent=MS.gene32594.t1
chr3.1 exon 85330545 85330751 85330545 ID=MS.gene32594.t1.exon2;Parent=MS.gene32594.t1
chr3.1 CDS 85330545 85330751 85330545 ID=cds.MS.gene32594.t1;Parent=MS.gene32594.t1
chr3.1 exon 85329940 85330151 85329940 ID=MS.gene32594.t1.exon3;Parent=MS.gene32594.t1
chr3.1 CDS 85329940 85330151 85329940 ID=cds.MS.gene32594.t1;Parent=MS.gene32594.t1
chr3.1 exon 85329115 85329679 85329115 ID=MS.gene32594.t1.exon4;Parent=MS.gene32594.t1
chr3.1 CDS 85329115 85329679 85329115 ID=cds.MS.gene32594.t1;Parent=MS.gene32594.t1
Gene Sequence

>MS.gene32594

ATGGAAGAAATTGAAGGTGTGAATTGTTTCAGTGAAGGTAGAAGCTCTAGTGAGAGTCGACCTCCAAATCCTAATCCATCCATTGCTTCTGCTTTTCGTCAATGTCAACGCAATGATCCTCTTGTTTTACCATGCAGAAAATCTCTTGTTCGCCACGCTTCTCTTGTAAGAAACCGATCTTTTGTTTTTTCTTTTGTTTTATAGTGTCTTGTGTTTTCATTGTGATAATGATGTTACTTAGTTTTGGAACAGTTATTACAGCATTTATTACTTTTCTCAAAATGATTCTTATCTTCATTTCTACGTTTTTAGCTTTATTCCTTTTTTTCTTTCCATTTGTCACTTTCATGTAGTGAGAATGTGTAATTTAAGCTTTGGTTTTGTATTTAATGTAGATAAAAACTAGGACTAGAATAGAAGGAAATTTTTGTTGAGAAAGAGAAATGAAATGAAATAATGATGGCGGGTTTTGGTTTGGTCAGATTGGGGAAGTGAAAAATTAGATGACAACAACATTATGATTAATTGTTGATTATGTTTTGTGGATTCAGTTTGCAACCTTAGGATTGATTATTGATTATTGGTGTTAGTAGGGTTATTTCTGGAGTAGTATAAGTTTATTTCTGCGCTGAAAAAAGTTCATCTTTCTACAAAAAAATTTCTTCACTTTAATGATGTGTTTTTTCATGACAATATCAGCAGACGAAAATGAAGTTGTCTGATGCATCTGTTGAGGATGTTACTGAAGGTTGCCAGTCTGATTTCCTTCCAAAGCTCCGTTCCGGAGGATGTGCTGATATCGGGTTCCGGTCAAATATGGAGGATGTGTATGTTTGTGTTGACAATTTTAGGCAGGGCCATGGGCTCAATAAACAACTTATAGATGGACCGAGTGCTTTCTATGGGGTATATATCTCTCTCCGCTTATCTTGATTGGAGTACTGATATGATAGTTGTTAAAATGGGATTTCATTTTTTTTTATTTGTTGACATCCCCATGTGTCGTTATTCTCTTTTCCTTCGTTTTGTCTTCTTTCATTCTCCTGTTCTGCACATCCGATGGCATCTTTTGGAAGTTCTTTGCAAATCTTAGTCCACATGCTAATCTTATTTTGTAATTGGTACTGCTTTACCTTTGGTGTGGACCAATGTGCATAAACACATATTAGACGTGCCTTTACTAGCTATGGAGTTTTTACAGTTGACAAGAATAGATATAGGTTTATTTATGTTGCTTGCATTTGTTTTTAAACTGCTTAGAAAAGTCAAGTAACGTTATATGTCGAATGGCTTGGTCAGGTGTTTGATGGACACGGCGGAAAGCATGCTGCTGACTTTGCTTGCAATCATTTGCCAAAGTTCATTCTCGAGGATAAAGATTTCCCAGTGGATATTGAAAGGATAGTTGCTTCTGCCTTTCTGCAAACAGACTATGCATTTGCGGAAGCTTGTTCTCTCAATGCTGCCCTTGCATCCGGCACCACTGCATTGGCTACTCTTGTTATAGGAAGGTCAGGATTTTGATATTCAATAATTTGGGCATACATCCTTTTTTTTACTATAAATTAGCACCAAAGGTATGCTAAATTTCTTGTCCGCGTTTTTTGGACAAGTACAAAAGACATAAATCTGACTGAGGTTTGGGATCTTTTTGGTCTGCTACAAAAGTTGGCCCATATTTCCATTTTCATGCTCTTCCTCTGACATGACATCAAATACATACATGTGATAATGTGATAAGTTGCATGCTGATTGTAGTTTCTGACTGTAGGTTGCTGGTGGTGGCAAATGCTGGAGATTGTCGAGCAGTGCTGTGCCGTCGTGGAAAAGCAATCGACATGTCAAGAGACCACAAACCAGGTTGCATGAAAGAGCAGAGGCGTATCGAGGCATCTGGGGGGTCTGTCTATGATGGATATCTTAACGGGCAACTTAATGTTGCTCGAGCTATTGGTGACTGGCACATGGAAGGAATGAAAGGCAAAGATGGTGGACCACTCAGTGCAGAGCCTGAACTCATGACTACAAAACTTACTGCCGAGGATGAATTTCTCATCATAGGCTGCGATGGGATTTGGGATGTTTTTAGAAGCCAAAATGCTGTAGATTTTGCGCGGCGCAGGCTTCAGGTGCATAACGACCCAGCTGTATGCAGTAAGGATCTGGTTGATGAGGCTTTGAAGAGAAAAAGTGGAGACAATTTAGCTGTTGTTGTGGTTTGCTTTCAGCAGCAGCCTCCACCAAATTTGGTAGCACCACGCTCCAGAGTGCACAGGAGCTTCTCTGCTGAAGGTTTGAAAGAGTTGCAAAGCTTTTTGGATAGCTTGGGAAAATGA
Protein sequence

>MS.gene32594.t1

MEEIEGVNCFSEGRSSSESRPPNPNPSIASAFRQCQRNDPLVLPCRKSLVRHASLQTKMKLSDASVEDVTEGCQSDFLPKLRSGGCADIGFRSNMEDVYVCVDNFRQGHGLNKQLIDGPSAFYGVFDGHGGKHAADFACNHLPKFILEDKDFPVDIERIVASAFLQTDYAFAEACSLNAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIDMSRDHKPGCMKEQRRIEASGGSVYDGYLNGQLNVARAIGDWHMEGMKGKDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQVHNDPAVCSKDLVDEALKRKSGDNLAVVVVCFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGK