AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene20891

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20891.t1 MTR_1g086350 98.205 390 7 0 1 390 1 390 0.0 786
MS.gene20891.t1 MTR_1g086350 94.103 390 7 1 1 390 1 374 0.0 746
MS.gene20891.t1 MTR_1g086350 98.901 273 3 0 118 390 16 288 0.0 558
MS.gene20891.t1 MTR_2g033000 56.848 387 148 3 1 387 1 368 2.94e-153 437
MS.gene20891.t1 MTR_4g123080 55.641 390 161 4 1 387 1 381 4.29e-152 434
MS.gene20891.t1 MTR_4g123080 55.128 390 145 5 1 387 1 363 1.54e-150 430
MS.gene20891.t1 MTR_5g024340 50.629 318 135 3 73 386 79 378 2.00e-109 326
MS.gene20891.t1 MTR_4g116420 47.904 334 146 6 62 385 68 383 3.13e-99 300
MS.gene20891.t1 MTR_3g107880 46.588 337 155 6 56 385 1 319 3.18e-94 285
MS.gene20891.t1 MTR_3g107880 47.230 343 154 8 50 385 55 377 1.63e-93 285
MS.gene20891.t1 MTR_3g107880 46.588 337 155 6 56 385 58 376 2.35e-93 285
MS.gene20891.t1 MTR_4g123080 66.250 160 53 1 228 387 110 268 9.21e-70 221
MS.gene20891.t1 MTR_4g123080 37.815 119 63 3 1 116 1 111 1.73e-14 73.6
MS.gene20891.t1 MTR_1g014640 34.058 276 148 8 87 357 85 331 6.40e-43 153
MS.gene20891.t1 MTR_1g013400 34.058 276 148 8 87 357 85 331 6.40e-43 153
MS.gene20891.t1 MTR_3g105730 33.216 283 154 9 87 364 20 272 1.91e-41 147
MS.gene20891.t1 MTR_3g105730 33.216 283 154 9 87 364 42 294 2.58e-41 147
MS.gene20891.t1 MTR_5g063940 35.000 240 128 6 114 347 15 232 9.82e-38 136
MS.gene20891.t1 MTR_5g063940 35.000 240 128 6 114 347 62 279 2.52e-37 136
MS.gene20891.t1 MTR_3g074610 35.833 240 126 7 114 347 62 279 5.15e-36 133
MS.gene20891.t1 MTR_1g014190 31.288 326 150 10 77 347 21 327 1.10e-35 134
MS.gene20891.t1 MTR_1g115570 35.470 234 125 8 117 347 125 335 1.57e-35 133
MS.gene20891.t1 MTR_1g014190 31.288 326 150 10 77 347 59 365 2.35e-35 134
MS.gene20891.t1 MTR_2g008850 35.021 237 126 6 117 347 18 232 2.48e-35 130
MS.gene20891.t1 MTR_3g105880 30.796 289 131 6 78 316 22 291 4.88e-35 132
MS.gene20891.t1 MTR_3g105880 30.796 289 131 6 78 316 22 291 8.20e-35 130
MS.gene20891.t1 MTR_2g008850 34.694 245 131 7 109 347 57 278 1.02e-34 129
MS.gene20891.t1 MTR_4g094208 35.021 237 126 7 117 347 60 274 1.56e-34 129
MS.gene20891.t1 MTR_4g007440 29.700 367 170 11 59 363 10 350 2.37e-34 130
MS.gene20891.t1 MTR_1g050520 30.347 346 186 12 32 356 340 651 9.45e-34 133
MS.gene20891.t1 MTR_5g071550 31.868 273 155 8 83 349 127 374 2.14e-33 128
MS.gene20891.t1 MTR_6g081850 31.615 291 165 9 78 349 43 318 4.38e-33 126
MS.gene20891.t1 MTR_3g491830 30.547 311 169 8 76 353 57 353 8.92e-33 127
MS.gene20891.t1 MTR_3g464650 31.273 275 154 8 83 349 67 314 1.08e-31 122
MS.gene20891.t1 MTR_3g464700 33.761 234 124 6 83 311 91 298 2.08e-31 122
MS.gene20891.t1 MTR_1g015110 32.394 284 146 10 113 368 285 550 5.13e-31 124
MS.gene20891.t1 MTR_1g028300 31.564 358 201 13 10 349 48 379 5.23e-31 122
MS.gene20891.t1 MTR_4g125810 30.508 295 164 10 86 352 225 506 2.51e-30 122
MS.gene20891.t1 MTR_5g071550 32.653 245 133 8 83 320 127 346 6.28e-30 118
MS.gene20891.t1 MTR_2g078760 33.054 239 132 9 117 349 37 253 5.22e-29 113
MS.gene20891.t1 MTR_2g078760 33.054 239 132 9 117 349 116 332 1.38e-28 114
MS.gene20891.t1 MTR_3g091060 30.159 252 147 8 118 364 125 352 2.67e-28 114
MS.gene20891.t1 MTR_8g463130 31.646 237 134 9 117 347 37 251 1.33e-27 110
MS.gene20891.t1 MTR_8g463130 31.646 237 134 9 117 347 65 279 1.36e-27 110
MS.gene20891.t1 MTR_5g009370 33.065 248 141 8 81 319 54 285 4.34e-27 110
MS.gene20891.t1 MTR_3g068200 29.866 298 148 9 87 347 100 373 5.91e-27 110
MS.gene20891.t1 MTR_2g040500 33.482 224 115 7 118 314 267 483 1.34e-26 111
MS.gene20891.t1 MTR_3g104710 31.298 262 146 8 118 351 286 541 3.09e-26 110
MS.gene20891.t1 MTR_4g094542 32.068 237 132 9 117 347 149 362 3.36e-25 105
MS.gene20891.t1 MTR_5g080680 28.682 258 144 6 77 317 99 333 6.29e-23 99.8
MS.gene20891.t1 MTR_2g435550 33.086 269 138 11 120 352 80 342 1.75e-22 97.8
MS.gene20891.t1 MTR_2g435550 33.086 269 138 11 120 352 94 356 1.92e-22 97.8
MS.gene20891.t1 MTR_2g078760 33.854 192 103 7 117 302 116 289 2.70e-22 96.3
MS.gene20891.t1 MTR_8g102550 29.153 295 177 7 81 351 104 390 3.33e-22 97.8
MS.gene20891.t1 MTR_3g105730 35.625 160 82 5 87 244 42 182 4.14e-22 94.0
MS.gene20891.t1 MTR_2g435550 32.971 276 140 12 120 356 94 363 8.61e-22 96.3
MS.gene20891.t1 MTR_6g087000 28.146 302 142 12 118 364 124 405 1.23e-19 91.7
MS.gene20891.t1 MTR_6g087000 28.146 302 142 12 118 364 124 405 1.55e-19 91.3
MS.gene20891.t1 MTR_4g118340 29.167 288 131 10 118 357 86 348 3.28e-19 89.0
MS.gene20891.t1 MTR_4g120410 27.174 276 159 8 118 357 91 360 4.19e-19 88.2
MS.gene20891.t1 MTR_1g106855 29.316 307 139 11 112 357 54 343 4.49e-19 88.2
MS.gene20891.t1 MTR_1g110210 30.293 307 173 15 76 366 32 313 7.15e-19 87.0
MS.gene20891.t1 MTR_3g032700 28.926 242 115 9 118 317 68 294 1.07e-18 87.8
MS.gene20891.t1 MTR_5g071550 35.443 158 83 5 87 244 131 269 2.11e-18 85.1
MS.gene20891.t1 MTR_3g032660 28.279 244 118 9 116 317 66 294 3.19e-18 86.3
MS.gene20891.t1 MTR_7g090550 26.939 245 124 7 114 317 66 296 3.51e-18 86.3
MS.gene20891.t1 MTR_1g106855 30.800 250 115 8 112 317 54 289 4.96e-18 84.3
MS.gene20891.t1 MTR_7g090530 28.571 238 121 10 118 317 69 295 1.34e-17 84.3
MS.gene20891.t1 MTR_5g005810 30.337 267 148 12 110 353 324 575 1.58e-17 84.7
MS.gene20891.t1 MTR_1g067210 28.782 271 133 11 103 335 67 315 1.66e-17 83.6
MS.gene20891.t1 MTR_1g016620 30.263 228 121 9 117 312 67 288 2.48e-17 82.8
MS.gene20891.t1 MTR_0015s0140 26.493 268 136 9 108 334 69 316 2.89e-17 83.2
MS.gene20891.t1 MTR_1g019760 29.213 267 150 12 117 366 64 308 7.69e-17 82.0
MS.gene20891.t1 MTR_7g100240 26.518 313 166 13 103 361 57 359 8.14e-17 81.6
MS.gene20891.t1 MTR_2g090190 30.417 240 116 11 118 312 90 323 1.16e-16 81.6
MS.gene20891.t1 MTR_2g033910 27.559 254 135 9 118 335 75 315 1.39e-16 80.9
MS.gene20891.t1 MTR_7g070510 29.119 261 133 9 118 335 92 343 2.89e-16 80.5
MS.gene20891.t1 MTR_1g116260 26.552 290 144 10 118 351 80 356 1.02e-15 78.6
MS.gene20891.t1 MTR_7g112430 28.464 267 157 11 117 367 67 315 2.89e-15 77.4
MS.gene20891.t1 MTR_4g113480 26.441 295 152 12 109 350 65 347 3.19e-15 77.8
MS.gene20891.t1 MTR_2g020970 25.714 280 145 9 118 354 87 346 3.37e-15 76.6
MS.gene20891.t1 MTR_1g083690 29.437 231 118 11 118 312 89 310 4.48e-15 76.3
MS.gene20891.t1 MTR_7g112490 26.277 274 152 10 80 312 57 321 6.36e-15 75.9
MS.gene20891.t1 MTR_5g080680 28.218 202 111 5 77 261 99 283 6.56e-15 74.7
MS.gene20891.t1 MTR_7g112490 27.542 236 125 9 118 312 109 339 7.77e-15 75.9
MS.gene20891.t1 MTR_7g080170 28.516 256 119 9 116 312 94 344 8.81e-15 76.3
MS.gene20891.t1 MTR_1g112840 25.087 287 154 10 117 351 80 357 9.60e-15 75.5
MS.gene20891.t1 MTR_7g021530 28.740 254 123 10 116 317 36 283 1.09e-14 75.1
MS.gene20891.t1 MTR_7g080170 31.034 174 96 5 158 312 68 236 1.40e-14 75.1
MS.gene20891.t1 MTR_8g017240 30.165 242 132 9 118 333 86 316 1.63e-14 74.7
MS.gene20891.t1 MTR_7g021530 28.740 254 123 10 116 317 86 333 1.94e-14 74.7
MS.gene20891.t1 MTR_2g078760 35.659 129 70 5 117 244 116 232 2.19e-14 73.2
MS.gene20891.t1 MTR_7g021530 28.740 254 123 10 116 317 127 374 2.59e-14 74.7
MS.gene20891.t1 MTR_8g074930 25.874 286 151 9 118 351 79 355 4.05e-14 73.6
MS.gene20891.t1 MTR_4g037470 28.030 264 134 11 118 335 96 349 5.55e-14 73.6
MS.gene20891.t1 MTR_4g037470 28.030 264 134 11 118 335 105 358 6.80e-14 73.2
MS.gene20891.t1 MTR_4g094208 36.641 131 70 4 117 246 60 178 8.28e-14 70.5
MS.gene20891.t1 MTR_4g013295 25.828 302 170 11 55 318 24 309 1.38e-13 71.6
MS.gene20891.t1 MTR_4g076560 25.794 252 145 8 118 334 202 446 1.46e-13 72.4
MS.gene20891.t1 MTR_7g081020 26.000 250 145 8 117 335 75 315 1.78e-13 71.6
MS.gene20891.t1 MTR_7g081020 25.431 232 138 7 117 317 75 302 9.77e-13 68.9
MS.gene20891.t1 MTR_3g032590 27.835 194 99 6 162 317 110 300 2.27e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene20891.t1 AT3G62260 61.480 392 136 8 1 386 1 383 1.96e-166 471
MS.gene20891.t1 AT3G62260 61.480 392 137 7 1 386 1 384 3.96e-166 470
MS.gene20891.t1 AT3G62260 68.581 296 90 2 92 386 1 294 3.04e-150 426
MS.gene20891.t1 AT1G48040 58.376 394 138 11 1 386 7 382 2.02e-145 418
MS.gene20891.t1 AT3G17250 55.495 364 142 10 34 386 68 422 4.45e-130 380
MS.gene20891.t1 AT2G33700 53.292 319 126 3 73 386 78 378 2.02e-116 344
MS.gene20891.t1 AT3G51470 49.527 317 129 5 74 384 23 314 6.62e-105 312
MS.gene20891.t1 AT3G51470 49.206 315 133 4 74 384 67 358 2.22e-104 312
MS.gene20891.t1 AT2G25620 46.087 345 157 7 53 386 63 389 5.97e-95 290
MS.gene20891.t1 AT2G25620 46.087 345 157 7 53 386 63 389 5.97e-95 290
MS.gene20891.t1 AT5G10740 35.294 272 142 8 81 347 35 277 4.63e-44 156
MS.gene20891.t1 AT5G10740 35.294 272 142 8 81 347 35 277 4.63e-44 156
MS.gene20891.t1 AT4G31750 34.962 266 139 8 87 347 41 277 4.12e-43 152
MS.gene20891.t1 AT4G31750 34.962 266 139 8 87 347 41 277 4.12e-43 152
MS.gene20891.t1 AT4G31750 34.962 266 139 8 87 347 41 277 4.57e-43 152
MS.gene20891.t1 AT5G24940 34.191 272 145 8 81 347 35 277 3.54e-42 154
MS.gene20891.t1 AT2G25070 30.267 337 161 6 78 359 22 339 1.29e-40 147
MS.gene20891.t1 AT2G25070 30.267 337 161 6 78 359 22 339 1.29e-40 147
MS.gene20891.t1 AT1G07160 33.574 277 154 7 83 352 126 379 6.71e-38 140
MS.gene20891.t1 AT1G43900 33.704 270 136 10 87 347 131 366 1.80e-37 139
MS.gene20891.t1 AT1G78200 34.601 263 138 8 99 347 38 280 4.26e-36 133
MS.gene20891.t1 AT1G78200 34.601 263 138 8 99 347 38 280 4.26e-36 133
MS.gene20891.t1 AT1G78200 34.601 263 138 8 99 347 38 280 4.26e-36 133
MS.gene20891.t1 AT4G31860 28.909 339 167 6 78 361 22 341 6.60e-36 135
MS.gene20891.t1 AT1G78200 34.661 251 136 8 105 347 5 235 7.08e-36 131
MS.gene20891.t1 AT1G78200 34.661 251 136 8 105 347 5 235 7.08e-36 131
MS.gene20891.t1 AT1G22280 33.333 237 136 6 117 347 64 284 1.27e-35 132
MS.gene20891.t1 AT4G31860 30.450 289 132 5 78 316 22 291 2.91e-34 129
MS.gene20891.t1 AT2G30020 32.482 274 154 8 83 349 143 392 3.10e-34 131
MS.gene20891.t1 AT1G67820 31.746 252 144 6 87 334 92 319 7.04e-34 130
MS.gene20891.t1 AT1G67820 31.746 252 144 6 87 334 128 355 1.85e-33 130
MS.gene20891.t1 AT1G22280 32.489 237 132 6 117 347 64 278 1.95e-33 126
MS.gene20891.t1 AT5G53140 32.051 234 135 6 118 347 132 345 4.41e-33 128
MS.gene20891.t1 AT5G53140 32.051 234 135 6 118 347 132 345 4.41e-33 128
MS.gene20891.t1 AT2G40180 32.226 301 177 9 58 352 109 388 7.40e-33 127
MS.gene20891.t1 AT2G20630 31.799 239 135 9 117 349 62 278 8.49e-33 125
MS.gene20891.t1 AT1G34750 32.636 239 133 6 117 349 65 281 1.60e-32 124
MS.gene20891.t1 AT1G34750 32.636 239 133 6 117 349 65 281 1.60e-32 124
MS.gene20891.t1 AT1G34750 32.636 239 133 6 117 349 65 281 1.60e-32 124
MS.gene20891.t1 AT4G26080 29.700 367 207 13 35 359 75 432 1.99e-32 127
MS.gene20891.t1 AT2G20630 31.646 237 134 9 117 347 62 276 2.67e-32 123
MS.gene20891.t1 AT2G40860 30.368 326 182 10 47 356 359 655 4.00e-32 128
MS.gene20891.t1 AT2G40860 30.368 326 182 10 47 356 261 557 5.83e-32 127
MS.gene20891.t1 AT4G28400 32.068 237 133 9 117 347 44 258 4.96e-31 119
MS.gene20891.t1 AT4G28400 32.068 237 133 9 117 347 66 280 8.54e-31 119
MS.gene20891.t1 AT1G18030 30.556 288 164 9 85 352 80 351 3.56e-30 119
MS.gene20891.t1 AT2G29380 31.250 304 160 10 75 347 73 358 1.39e-29 117
MS.gene20891.t1 AT4G31860 29.670 273 123 5 78 300 22 275 2.33e-29 115
MS.gene20891.t1 AT1G07430 29.181 281 163 7 49 318 105 360 5.96e-29 117
MS.gene20891.t1 AT4G27800 31.515 330 171 11 72 366 52 361 1.22e-28 115
MS.gene20891.t1 AT5G57050 32.569 218 135 5 102 314 104 314 1.83e-28 115
MS.gene20891.t1 AT5G57050 34.158 202 121 5 118 314 160 354 2.20e-28 115
MS.gene20891.t1 AT2G40860 30.363 303 166 10 47 333 359 632 2.22e-28 117
MS.gene20891.t1 AT3G15260 30.380 237 137 7 117 347 72 286 3.01e-28 112
MS.gene20891.t1 AT3G15260 30.380 237 137 7 117 347 72 286 3.01e-28 112
MS.gene20891.t1 AT5G51760 31.008 258 147 6 81 317 80 327 8.78e-27 110
MS.gene20891.t1 AT5G51760 31.008 258 147 6 81 317 110 357 1.19e-26 110
MS.gene20891.t1 AT3G11410 31.538 260 147 6 75 317 102 347 3.48e-26 108
MS.gene20891.t1 AT4G27800 31.650 297 154 9 72 334 52 333 1.23e-25 106
MS.gene20891.t1 AT4G27800 31.818 286 146 9 72 323 52 322 8.17e-25 103
MS.gene20891.t1 AT1G18030 30.802 237 129 8 85 302 80 300 9.31e-25 103
MS.gene20891.t1 AT4G28400 33.333 192 104 7 117 302 66 239 7.35e-24 99.8
MS.gene20891.t1 AT1G17550 26.552 290 167 7 102 351 220 503 8.61e-24 103
MS.gene20891.t1 AT1G17550 26.552 290 167 7 102 351 220 503 8.61e-24 103
MS.gene20891.t1 AT1G72770 29.304 273 147 8 118 351 238 503 9.02e-24 103
MS.gene20891.t1 AT1G72770 29.304 273 147 8 118 351 238 503 9.02e-24 103
MS.gene20891.t1 AT1G72770 29.304 273 147 8 118 351 238 503 9.02e-24 103
MS.gene20891.t1 AT5G59220 30.195 308 173 11 32 317 60 347 9.27e-24 102
MS.gene20891.t1 AT2G20050 29.856 278 132 10 118 352 143 400 3.97e-23 102
MS.gene20891.t1 AT2G20050 29.856 278 132 10 118 352 143 400 4.32e-23 102
MS.gene20891.t1 AT3G06270 28.058 278 137 8 118 352 88 345 5.14e-22 96.7
MS.gene20891.t1 AT1G34750 31.771 192 107 5 117 302 65 238 1.02e-21 93.6
MS.gene20891.t1 AT2G34740 27.917 240 143 11 117 349 118 334 1.30e-20 92.4
MS.gene20891.t1 AT1G68410 29.154 319 182 13 62 365 29 318 1.54e-19 90.1
MS.gene20891.t1 AT1G68410 29.154 319 182 13 62 365 29 318 1.54e-19 90.1
MS.gene20891.t1 AT1G68410 29.154 319 182 13 62 365 29 318 1.54e-19 90.1
MS.gene20891.t1 AT1G68410 29.154 319 182 13 62 365 29 318 1.54e-19 90.1
MS.gene20891.t1 AT2G40860 30.418 263 141 9 47 293 359 595 5.15e-19 89.4
MS.gene20891.t1 AT3G16800 30.894 246 135 9 117 336 92 328 7.52e-19 87.4
MS.gene20891.t1 AT3G16800 30.894 246 135 9 117 336 92 328 7.52e-19 87.4
MS.gene20891.t1 AT3G16800 30.894 246 135 9 117 336 92 328 7.52e-19 87.4
MS.gene20891.t1 AT5G02760 28.322 286 142 12 117 350 71 345 1.02e-18 87.4
MS.gene20891.t1 AT4G08260 30.508 236 116 9 117 349 18 208 4.28e-18 82.8
MS.gene20891.t1 AT3G16800 33.862 189 96 6 168 336 54 233 7.23e-18 83.2
MS.gene20891.t1 AT3G16800 33.862 189 96 6 168 336 54 233 7.23e-18 83.2
MS.gene20891.t1 AT1G09160 30.189 265 147 12 116 361 64 309 7.33e-18 85.1
MS.gene20891.t1 AT1G09160 30.189 265 147 12 116 361 64 309 7.33e-18 85.1
MS.gene20891.t1 AT5G19280 29.572 257 154 10 109 347 328 575 1.13e-17 85.1
MS.gene20891.t1 AT5G06750 26.996 263 149 7 108 336 72 325 1.14e-17 84.3
MS.gene20891.t1 AT5G06750 26.996 263 149 7 108 336 72 325 1.14e-17 84.3
MS.gene20891.t1 AT2G34740 30.392 204 115 11 117 312 132 316 1.18e-17 83.6
MS.gene20891.t1 AT2G34740 30.392 204 115 11 117 312 114 298 1.45e-17 83.2
MS.gene20891.t1 AT3G12620 27.393 303 145 13 108 351 73 359 1.55e-17 84.0
MS.gene20891.t1 AT3G12620 27.393 303 145 13 108 351 73 359 1.55e-17 84.0
MS.gene20891.t1 AT3G17090 28.000 250 138 8 117 334 83 322 1.76e-17 83.6
MS.gene20891.t1 AT5G26010 28.782 271 153 8 66 312 29 283 1.89e-17 83.2
MS.gene20891.t1 AT5G57050 31.333 150 97 3 118 262 160 308 1.94e-17 82.8
MS.gene20891.t1 AT3G17090 28.017 232 132 6 117 317 83 310 2.71e-17 82.4
MS.gene20891.t1 AT5G27930 29.762 252 133 10 118 335 92 333 3.66e-17 82.8
MS.gene20891.t1 AT5G27930 29.762 252 133 10 118 335 92 333 3.66e-17 82.8
MS.gene20891.t1 AT3G05640 29.134 254 142 10 110 335 85 328 2.62e-16 80.1
MS.gene20891.t1 AT3G05640 29.134 254 142 10 110 335 85 328 2.62e-16 80.1
MS.gene20891.t1 AT3G05640 29.134 254 142 10 110 335 85 328 2.62e-16 80.1
MS.gene20891.t1 AT5G19280 28.839 267 153 11 109 347 328 585 3.81e-16 80.5
MS.gene20891.t1 AT4G03415 30.165 242 118 11 117 312 96 332 6.87e-16 79.3
MS.gene20891.t1 AT4G03415 30.165 242 118 11 117 312 96 332 6.87e-16 79.3
MS.gene20891.t1 AT4G03415 30.165 242 118 11 117 312 96 332 6.87e-16 79.3
MS.gene20891.t1 AT1G16220 29.778 225 127 8 150 349 156 374 8.16e-16 79.3
MS.gene20891.t1 AT5G36250 26.154 325 152 11 116 361 96 411 1.69e-15 78.2
MS.gene20891.t1 AT4G32950 26.199 271 161 10 117 364 71 325 2.14e-15 77.0
MS.gene20891.t1 AT3G51370 24.161 298 164 10 117 362 78 365 3.85e-15 76.6
MS.gene20891.t1 AT3G51370 24.161 298 164 10 117 362 78 365 3.85e-15 76.6
MS.gene20891.t1 AT3G02750 32.222 180 98 6 152 312 179 353 7.20e-15 76.6
MS.gene20891.t1 AT3G02750 32.222 180 98 6 152 312 179 353 7.20e-15 76.6
MS.gene20891.t1 AT3G27140 27.615 239 105 6 114 349 15 188 8.49e-15 73.9
MS.gene20891.t1 AT1G22280 35.556 135 66 4 117 246 64 182 1.55e-14 72.4
MS.gene20891.t1 AT3G55050 24.510 306 150 9 116 359 82 368 2.17e-14 74.3
MS.gene20891.t1 AT3G55050 24.510 306 150 9 116 359 82 368 2.17e-14 74.3
MS.gene20891.t1 AT1G03590 27.536 276 137 11 83 312 64 322 3.90e-14 73.9
MS.gene20891.t1 AT4G38520 25.392 319 171 9 82 347 49 353 4.13e-14 73.6
MS.gene20891.t1 AT4G38520 25.392 319 171 9 82 347 49 353 4.13e-14 73.6
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 111 287 4.78e-14 73.6
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 111 287 4.78e-14 73.6
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 111 287 4.78e-14 73.6
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 111 287 4.78e-14 73.6
MS.gene20891.t1 AT5G59220 29.084 251 142 10 32 260 60 296 6.20e-14 72.4
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 151 327 6.58e-14 73.2
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 151 327 6.58e-14 73.2
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 217 393 6.74e-14 73.6
MS.gene20891.t1 AT5G01700 27.556 225 128 7 118 312 29 248 7.20e-14 72.4
MS.gene20891.t1 AT1G79630 31.720 186 95 6 187 349 221 397 7.85e-14 73.2
MS.gene20891.t1 AT5G01700 27.556 225 128 7 118 312 78 297 1.07e-13 72.4
MS.gene20891.t1 AT1G72770 31.515 165 90 5 118 260 238 401 1.24e-13 72.4
MS.gene20891.t1 AT1G72770 31.515 165 90 5 118 260 238 401 1.24e-13 72.4
MS.gene20891.t1 AT5G66080 26.087 253 141 9 117 335 81 321 1.97e-12 68.6
MS.gene20891.t1 AT5G36250 25.074 339 152 12 116 361 96 425 2.11e-12 68.9
MS.gene20891.t1 AT5G06750 28.415 183 90 6 188 336 68 243 2.43e-11 64.7
MS.gene20891.t1 AT4G32950 29.064 203 114 8 117 299 71 263 9.40e-11 62.8

Find 110 sgRNAs with CRISPR-Local

Find 190 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCTTACTGCTTTGATATT+TGG 0.143776 1.3:-61152817 MS.gene20891:CDS
GTTGAGGATGGTTATCTTAA+TGG 0.188453 1.3:-61152289 MS.gene20891:CDS
AAATCCCTGGCGCACTTCTC+TGG 0.265688 1.3:+61152055 None:intergenic
CCATAAAAGGCACTTGGTTT+AGG 0.274695 1.3:+61153131 None:intergenic
CTTATATACGCTGCAGCTTC+AGG 0.274755 1.3:+61153006 None:intergenic
TCATAGGATGCGACGGCATC+TGG 0.286067 1.3:-61152141 MS.gene20891:CDS
TGATTATTGCTTCCTTTATT+CGG 0.290741 1.3:+61154291 None:intergenic
CCAAAAGAAAAGCCTTTCTA+AGG 0.291213 1.3:+61152893 None:intergenic
AAAGCTCATTACCCCATAAA+AGG 0.322934 1.3:+61153118 None:intergenic
TGCTTCTTTCAGGCTTCTAA+TGG 0.327203 1.3:-61152434 MS.gene20891:intron
CTCCGCTCTGATGGATAAAT+AGG 0.332580 1.3:+61152337 None:intergenic
AGATGATTTGTCATCTCATC+TGG 0.348517 1.3:-61153171 MS.gene20891:CDS
TGTTCTAAAATTCTTCTTTG+AGG 0.363877 1.3:-61152977 MS.gene20891:CDS
CTCAATTTCCGTTGGGGAGG+TGG 0.372037 1.3:+61151938 None:intergenic
GCCTCTCCTCCCTTGACCAT+GGG 0.399297 1.3:-61151976 MS.gene20891:CDS
ACATGGAAGATGAACATATA+AGG 0.401510 1.3:-61153196 MS.gene20891:CDS
TTTGTCCCCTCCATCCGTTC+CGG 0.407179 1.3:-61153248 MS.gene20891:CDS
CAAATGTATCAGGTATTTGA+TGG 0.410247 1.3:-61153039 MS.gene20891:intron
GCGGAGGCGAGTTGAAGAAT+TGG 0.412143 1.3:-61152320 MS.gene20891:CDS
TTGTAGCTTGAGAAGCTTGT+TGG 0.428662 1.3:-61151888 MS.gene20891:CDS
ATTTAGTTATGGAGGCATTA+CGG 0.434702 1.3:-61152036 MS.gene20891:CDS
AGCAATGTGAACACTTCATC+AGG 0.438598 1.3:-61152847 MS.gene20891:CDS
GGTAGAGAATTCCCTTAGAA+AGG 0.439506 1.3:-61152905 MS.gene20891:CDS
GTGCGCCAGGGATTTAGTTA+TGG 0.439518 1.3:-61152047 MS.gene20891:CDS
TTCCGTTGGGGAGGTGGTGA+TGG 0.442729 1.3:+61151944 None:intergenic
ACAGCATCTCAATTTCCGTT+GGG 0.444872 1.3:+61151931 None:intergenic
GCCTTGTTCGTAAAGGTTTG+AGG 0.452873 1.3:-61152090 MS.gene20891:CDS
TTACAAGAGCACTAGGGGAC+TGG 0.457323 1.3:-61152255 MS.gene20891:CDS
TTGACATGTCTCAAGATCAT+AGG 0.464758 1.3:-61152360 MS.gene20891:CDS
CGGAGGCGAGTTGAAGAATT+GGG 0.474033 1.3:-61152319 MS.gene20891:CDS
TCAACTCGCCTCCGCTCTGA+TGG 0.480527 1.3:+61152328 None:intergenic
CTTCTAATGGTGGCAAATGC+CGG 0.483674 1.3:-61152421 MS.gene20891:CDS
CCCAATGTCGGCAAAACTAC+CGG 0.492205 1.3:+61153229 None:intergenic
TACAGCATCTCAATTTCCGT+TGG 0.495681 1.3:+61151930 None:intergenic
TGCCTCTCCTCCCTTGACCA+TGG 0.496106 1.3:-61151977 MS.gene20891:CDS
AATCCCTGGCGCACTTCTCT+GGG 0.496285 1.3:+61152056 None:intergenic
CATTGGGCCACGTAGATACA+TGG 0.506610 1.3:-61153213 MS.gene20891:CDS
ATGACCCAGAGAAGTGCGCC+AGG 0.512332 1.3:-61152060 MS.gene20891:CDS
TACAAGAGCACTAGGGGACT+GGG 0.512905 1.3:-61152254 MS.gene20891:CDS
CATAGGATGCGACGGCATCT+GGG 0.522185 1.3:-61152140 MS.gene20891:CDS
TTATCAGTTACAAGAGCACT+AGG 0.525545 1.3:-61152262 MS.gene20891:CDS
TTCTTTCAGGCTTCTAATGG+TGG 0.526946 1.3:-61152431 MS.gene20891:intron
GCTCTGACTCCCCATGGTCA+AGG 0.526959 1.3:+61151966 None:intergenic
GCTGTTAGCCTTGTTCGTAA+AGG 0.539320 1.3:-61152097 MS.gene20891:CDS
GATGACGAATTCCTCATCAT+AGG 0.544393 1.3:-61152157 MS.gene20891:CDS
AAAACTACCGGAACGGATGG+AGG 0.545279 1.3:+61153241 None:intergenic
CTCTGACTCCCCATGGTCAA+GGG 0.545804 1.3:+61151967 None:intergenic
CGAGCAGTTCTCAGTCGTAA+AGG 0.550384 1.3:-61152391 MS.gene20891:CDS
AACTACCGGAACGGATGGAG+GGG 0.553531 1.3:+61153243 None:intergenic
AAACTACCGGAACGGATGGA+GGG 0.556241 1.3:+61153242 None:intergenic
TCCTCAAACCTTTACGAACA+AGG 0.556250 1.3:+61152089 None:intergenic
TGCCTCCATAACTAAATCCC+TGG 0.558404 1.3:+61152042 None:intergenic
CATCCTCTGTTAGAACCACT+TGG 0.559287 1.3:+61152176 None:intergenic
GGCAAAACTACCGGAACGGA+TGG 0.564330 1.3:+61153238 None:intergenic
TTACTGCTTTGATATTTGGA+AGG 0.566507 1.3:-61152813 MS.gene20891:intron
ACAGATATAACCTCGGAAGC+TGG 0.566543 1.3:-61153293 MS.gene20891:CDS
GGAAGCAATAATCACGAGAT+CGG 0.569319 1.3:-61154282 MS.gene20891:CDS
AGAACCACTTGGTGGAACTC+AGG 0.569374 1.3:+61152187 None:intergenic
CGCCAGGGATTTAGTTATGG+AGG 0.569650 1.3:-61152044 MS.gene20891:CDS
ATTACCCCATAAAAGGCACT+TGG 0.570593 1.3:+61153125 None:intergenic
ATCAGTTACAAGAGCACTAG+GGG 0.576946 1.3:-61152260 MS.gene20891:CDS
GAGAACTGCTCGGCAGTCAC+CGG 0.579491 1.3:+61152402 None:intergenic
TTGGGTGGCTATGTTGAGGA+TGG 0.581725 1.3:-61152301 MS.gene20891:CDS
GTGATGGCTCTGACTCCCCA+TGG 0.582322 1.3:+61151960 None:intergenic
CCTCTGTTAGAACCACTTGG+TGG 0.583923 1.3:+61152179 None:intergenic
CCTCTCCTCCCTTGACCATG+GGG 0.584021 1.3:-61151975 MS.gene20891:CDS
CAAAAGAAAAGCCTTTCTAA+GGG 0.589375 1.3:+61152894 None:intergenic
ATGCTGTAGCCTCTCTGCAG+AGG 0.592273 1.3:-61151915 MS.gene20891:CDS
ACTGGGACATGAAGTTACCT+AGG 0.593025 1.3:-61152237 MS.gene20891:CDS
ATGATCTTGAGACATGTCAA+TGG 0.593621 1.3:+61152363 None:intergenic
AACTCAGGATCTGCAATCAA+AGG 0.595994 1.3:+61152202 None:intergenic
TTCCTCATCATAGGATGCGA+CGG 0.597323 1.3:-61152148 MS.gene20891:CDS
CCCCATGGTCAAGGGAGGAG+AGG 0.598657 1.3:+61151975 None:intergenic
AGGATCTGCAATCAAAGGTG+AGG 0.598833 1.3:+61152207 None:intergenic
AGCTTGAGAAGCTTGTTGGA+AGG 0.599170 1.3:-61151884 MS.gene20891:CDS
GTATCTACGTGGCCCAATGT+CGG 0.599170 1.3:+61153217 None:intergenic
TATCAGTTACAAGAGCACTA+GGG 0.602901 1.3:-61152261 MS.gene20891:CDS
TATCAACTTCAGATATCTGA+GGG 0.604131 1.3:+61152944 None:intergenic
TATCAGGTATTTGATGGTCA+CGG 0.605355 1.3:-61153033 MS.gene20891:intron
GGATCTGCAATCAAAGGTGA+GGG 0.605483 1.3:+61152208 None:intergenic
GATGATTTGTCATCTCATCT+GGG 0.605596 1.3:-61153170 MS.gene20891:CDS
TTGTTCGTAAAGGTTTGAGG+AGG 0.607519 1.3:-61152087 MS.gene20891:CDS
CATCTCAATTTCCGTTGGGG+AGG 0.607773 1.3:+61151935 None:intergenic
AAAGGTGAGGGAGTACCCCT+AGG 0.611278 1.3:+61152220 None:intergenic
CTGGGACATGAAGTTACCTA+GGG 0.615233 1.3:-61152236 MS.gene20891:CDS
CAGCATCTCAATTTCCGTTG+GGG 0.615519 1.3:+61151932 None:intergenic
GGAAGCTGGTCTTGAATCTG+CGG 0.621302 1.3:-61153279 MS.gene20891:CDS
AGATTCAAGACCAGCTTCCG+AGG 0.622877 1.3:+61153283 None:intergenic
TGCCGTCGCATCCTATGATG+AGG 0.626062 1.3:+61152146 None:intergenic
TTATCAACTTCAGATATCTG+AGG 0.626203 1.3:+61152943 None:intergenic
AGCCATCACCACCTCCCCAA+CGG 0.627178 1.3:-61151946 MS.gene20891:CDS
AGATCCTGAGTTCCACCAAG+TGG 0.637528 1.3:-61152191 MS.gene20891:CDS
TGACTCCCCATGGTCAAGGG+AGG 0.641391 1.3:+61151970 None:intergenic
AGTTCTCAGTCGTAAAGGAG+AGG 0.648854 1.3:-61152386 MS.gene20891:CDS
TGTCGGCAAAACTACCGGAA+CGG 0.650590 1.3:+61153234 None:intergenic
CTATTTATCCATCAGAGCGG+AGG 0.652008 1.3:-61152336 MS.gene20891:CDS
TATCAAAGCAGTAAGAGCTG+TGG 0.655912 1.3:+61152822 None:intergenic
AGAATTGGGTGGCTATGTTG+AGG 0.660809 1.3:-61152305 MS.gene20891:CDS
CCACCAAGTGGTTCTAACAG+AGG 0.661607 1.3:-61152179 MS.gene20891:CDS
TGTTGTGTGTCAACAAAGCG+TGG 0.664702 1.3:-61154328 MS.gene20891:CDS
CTTTACGACTGAGAACTGCT+CGG 0.672783 1.3:+61152392 None:intergenic
TGACCCAGAGAAGTGCGCCA+GGG 0.686052 1.3:-61152059 MS.gene20891:CDS
TACAAAGAGCCTCTGCAGAG+AGG 0.687122 1.3:+61151906 None:intergenic
GCAATGTGAACACTTCATCA+GGG 0.690510 1.3:-61152846 MS.gene20891:CDS
AGGCGAGTTGAAGAATTGGG+TGG 0.701087 1.3:-61152316 MS.gene20891:CDS
TAAGACTACAGATATAACCT+CGG 0.729528 1.3:-61153300 MS.gene20891:CDS
TCATCTTCCATGTATCTACG+TGG 0.732485 1.3:+61153206 None:intergenic
GGCCTATTTATCCATCAGAG+CGG 0.741189 1.3:-61152339 MS.gene20891:CDS
CAGGTATTTGATGGTCACGG+AGG 0.753703 1.3:-61153030 MS.gene20891:CDS
TGGGACATGAAGTTACCTAG+GGG 0.804911 1.3:-61152235 MS.gene20891:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAAAAAGAAAAACAAATT+TGG - chr1.3:61152205-61152224 MS.gene20891:CDS 10.0%
!! AAACTAAATTATCAAAATTC+AGG + chr1.3:61152290-61152309 None:intergenic 15.0%
!!! TTTTTATTTAGCTTAGAAAT+TGG - chr1.3:61152314-61152333 MS.gene20891:CDS 15.0%
!! AAGAAATAAACATTAGATAG+TGG + chr1.3:61153468-61153487 None:intergenic 20.0%
!! AATTGTGATTGTAATTTGAT+TGG - chr1.3:61152548-61152567 MS.gene20891:intron 20.0%
!! GGATCATCATAAAAATAAAT+TGG + chr1.3:61152360-61152379 None:intergenic 20.0%
!! GGATCATTTAATACTAATAA+TGG + chr1.3:61152624-61152643 None:intergenic 20.0%
!! TAAACATGTTTCATTAGATA+TGG - chr1.3:61153619-61153638 MS.gene20891:intron 20.0%
!!! AAAACAAATTTGGAAACTTT+TGG - chr1.3:61152215-61152234 MS.gene20891:CDS 20.0%
!!! CCAAATTTTTTTTAGAACAA+GGG - chr1.3:61152378-61152397 MS.gene20891:CDS 20.0%
!!! TCCAAATTTTTTTTAGAACA+AGG - chr1.3:61152377-61152396 MS.gene20891:CDS 20.0%
!!! TGATAATGTATTTTTACAAG+AGG - chr1.3:61153290-61153309 MS.gene20891:CDS 20.0%
!!! TGATTTGCGTTTAATTATTT+TGG - chr1.3:61152883-61152902 MS.gene20891:CDS 20.0%
!!! TTTCTTTTGTACATTTGTAA+TGG - chr1.3:61153482-61153501 MS.gene20891:intron 20.0%
! AAACAGAAGAAATTCTCAAA+AGG + chr1.3:61152051-61152070 None:intergenic 25.0%
! AAATATGCTGCAACTAATAA+TGG + chr1.3:61152698-61152717 None:intergenic 25.0%
! AACAGAAGAAATTCTCAAAA+GGG + chr1.3:61152050-61152069 None:intergenic 25.0%
! AAGTCAGTTAAACAAACAAA+GGG + chr1.3:61153756-61153775 None:intergenic 25.0%
! GTAGAAGAATAAAAAAACTC+TGG - chr1.3:61153698-61153717 MS.gene20891:intron 25.0%
! TATAATGTATGGGTACTATT+AGG - chr1.3:61153506-61153525 MS.gene20891:intron 25.0%
! TGAATTTGATTGATCTTAGA+AGG - chr1.3:61152259-61152278 MS.gene20891:CDS 25.0%
! TGATTATTGCTTCCTTTATT+CGG + chr1.3:61151928-61151947 None:intergenic 25.0%
! TTGTAAATCTAATTGAGCTT+TGG - chr1.3:61153154-61153173 MS.gene20891:CDS 25.0%
! TTGTAATGGCTATAATGTAT+GGG - chr1.3:61153496-61153515 MS.gene20891:intron 25.0%
! TTTGTAATGGCTATAATGTA+TGG - chr1.3:61153495-61153514 MS.gene20891:intron 25.0%
!! GAATTCTTGACTTCTATTTT+GGG - chr1.3:61152165-61152184 MS.gene20891:CDS 25.0%
!! TGAATTCTTGACTTCTATTT+TGG - chr1.3:61152164-61152183 MS.gene20891:CDS 25.0%
!! TTGAGAATTTCTTCTGTTTT+TGG - chr1.3:61152052-61152071 MS.gene20891:CDS 25.0%
!! TTTTCTTTTCATTTCTCATG+TGG - chr1.3:61152722-61152741 MS.gene20891:intron 25.0%
!! TTTTTATTCTTCTACCTAGA+GGG + chr1.3:61153693-61153712 None:intergenic 25.0%
!!! CCCTTGTTCTAAAAAAAATT+TGG + chr1.3:61152381-61152400 None:intergenic 25.0%
!!! TGTTCTAAAATTCTTCTTTG+AGG - chr1.3:61153239-61153258 MS.gene20891:CDS 25.0%
!!! TTTTGGTGATTTTGTTTTGT+TGG - chr1.3:61152069-61152088 MS.gene20891:CDS 25.0%
!!! TTTTTTATTCTTCTACCTAG+AGG + chr1.3:61153694-61153713 None:intergenic 25.0%
ACATGGAAGATGAACATATA+AGG - chr1.3:61153020-61153039 MS.gene20891:CDS 30.0%
ACTTCTAATATGCTTCTTTC+AGG - chr1.3:61153772-61153791 MS.gene20891:intron 30.0%
AGAAAAACCAAGAACCTAAA+AGG + chr1.3:61153438-61153457 None:intergenic 30.0%
CAAAAGAAAAGCCTTTCTAA+GGG + chr1.3:61153325-61153344 None:intergenic 30.0%
CAAAGAAACTCAATTTCAAC+TGG + chr1.3:61152417-61152436 None:intergenic 30.0%
CAAATGTATCAGGTATTTGA+TGG - chr1.3:61153177-61153196 MS.gene20891:CDS 30.0%
GAAGTCAGTTAAACAAACAA+AGG + chr1.3:61153757-61153776 None:intergenic 30.0%
GTTTATAACCTTCATTGTTG+AGG - chr1.3:61152573-61152592 MS.gene20891:intron 30.0%
TAAACATAATCAAGAGACCT+AGG + chr1.3:61153128-61153147 None:intergenic 30.0%
TAAGACTACAGATATAACCT+CGG - chr1.3:61152916-61152935 MS.gene20891:CDS 30.0%
TATCAACTTCAGATATCTGA+GGG + chr1.3:61153275-61153294 None:intergenic 30.0%
TGAAATTGAGTTTCTTTGTG+AGG - chr1.3:61152419-61152438 MS.gene20891:CDS 30.0%
TTACTGCTTTGATATTTGGA+AGG - chr1.3:61153403-61153422 MS.gene20891:intron 30.0%
TTATCAACTTCAGATATCTG+AGG + chr1.3:61153276-61153295 None:intergenic 30.0%
! TAAAGTAGTTGATACCAAGA+AGG - chr1.3:61152465-61152484 MS.gene20891:intron 30.0%
!! ATTTAGTTATGGAGGCATTA+CGG - chr1.3:61154180-61154199 MS.gene20891:intron 30.0%
!! GTGAAGTATTTTCCGAATAA+AGG - chr1.3:61151913-61151932 MS.gene20891:CDS 30.0%
!! TATTAGGTTGAAAGAGGATA+AGG - chr1.3:61153522-61153541 MS.gene20891:intron 30.0%
!!! GCGTTTAATTATTTTGGTGT+AGG - chr1.3:61152889-61152908 MS.gene20891:CDS 30.0%
!!! TGAAGAGAAGTTAGTTTTCT+AGG + chr1.3:61152650-61152669 None:intergenic 30.0%
AAACCAAGAACCTAAAAGGA+TGG + chr1.3:61153434-61153453 None:intergenic 35.0%
AAAGCTCATTACCCCATAAA+AGG + chr1.3:61153101-61153120 None:intergenic 35.0%
ATGATCTTGAGACATGTCAA+TGG + chr1.3:61153856-61153875 None:intergenic 35.0%
ATGGGTTTCTTTCTTTCTCT+TGG - chr1.3:61152117-61152136 MS.gene20891:CDS 35.0%
CAATGTGACTGAAGAACTTA+GGG - chr1.3:61152668-61152687 MS.gene20891:intron 35.0%
CATTAGATATGGTTCGTGAT+TGG - chr1.3:61153630-61153649 MS.gene20891:intron 35.0%
CCAAAAGAAAAGCCTTTCTA+AGG + chr1.3:61153326-61153345 None:intergenic 35.0%
GCTCTTACTGCTTTGATATT+TGG - chr1.3:61153399-61153418 MS.gene20891:intron 35.0%
GGATGATATAGATGCCAATT+GGG - chr1.3:61152090-61152109 MS.gene20891:CDS 35.0%
GTTGAGGATGGTTATCTTAA+TGG - chr1.3:61153927-61153946 MS.gene20891:intron 35.0%
TCAATGTGACTGAAGAACTT+AGG - chr1.3:61152667-61152686 MS.gene20891:intron 35.0%
TCAGTTAAACAAACAAAGGG+AGG + chr1.3:61153753-61153772 None:intergenic 35.0%
TCTGGTTGTTGTATTAGCTA+TGG - chr1.3:61153716-61153735 MS.gene20891:intron 35.0%
TGCTTTGATATTTGGAAGGT+AGG - chr1.3:61153407-61153426 MS.gene20891:intron 35.0%
TGGATGATATAGATGCCAAT+TGG - chr1.3:61152089-61152108 MS.gene20891:CDS 35.0%
TGTATGACACTGTATGATCT+AGG - chr1.3:61153659-61153678 MS.gene20891:intron 35.0%
TTGACATGTCTCAAGATCAT+AGG - chr1.3:61153856-61153875 MS.gene20891:intron 35.0%
TTGTTGTATTAGCTATGGAG+AGG - chr1.3:61153721-61153740 MS.gene20891:intron 35.0%
! AGATGATTTGTCATCTCATC+TGG - chr1.3:61153045-61153064 MS.gene20891:intron 35.0%
! CCTTAGAAAGGCTTTTCTTT+TGG - chr1.3:61153323-61153342 MS.gene20891:intron 35.0%
! CTAAACCAAGTGCCTTTTAT+GGG - chr1.3:61153086-61153105 MS.gene20891:intron 35.0%
! GATGATTTGTCATCTCATCT+GGG - chr1.3:61153046-61153065 MS.gene20891:intron 35.0%
! TAAACCAAGTGCCTTTTATG+GGG - chr1.3:61153087-61153106 MS.gene20891:intron 35.0%
! TATCAGGTATTTGATGGTCA+CGG - chr1.3:61153183-61153202 MS.gene20891:CDS 35.0%
!! TATCAGTTACAAGAGCACTA+GGG - chr1.3:61153955-61153974 MS.gene20891:intron 35.0%
!! TTATCAGTTACAAGAGCACT+AGG - chr1.3:61153954-61153973 MS.gene20891:intron 35.0%
!!! AGAAGTTAGTTTTCTAGGCA+TGG + chr1.3:61152645-61152664 None:intergenic 35.0%
AACTCAGGATCTGCAATCAA+AGG + chr1.3:61154017-61154036 None:intergenic 40.0%
ACAGCATCTCAATTTCCGTT+GGG + chr1.3:61154288-61154307 None:intergenic 40.0%
AGAAACCCATCAAACCCAAT+TGG + chr1.3:61152107-61152126 None:intergenic 40.0%
AGATGCCAATTGGGTTTGAT+GGG - chr1.3:61152099-61152118 MS.gene20891:CDS 40.0%
AGCAATGTGAACACTTCATC+AGG - chr1.3:61153369-61153388 MS.gene20891:intron 40.0%
AGCAGATATGTCATCCTTCT+TGG + chr1.3:61152482-61152501 None:intergenic 40.0%
ATTCTTCTACCTAGAGGGAT+TGG + chr1.3:61153688-61153707 None:intergenic 40.0%
GAGGTTTGATATGTGTGTGA+TGG - chr1.3:61152438-61152457 MS.gene20891:intron 40.0%
GATGACGAATTCCTCATCAT+AGG - chr1.3:61154059-61154078 MS.gene20891:intron 40.0%
GCAATGTGAACACTTCATCA+GGG - chr1.3:61153370-61153389 MS.gene20891:intron 40.0%
GCACATAACCTCAACAATGA+AGG + chr1.3:61152584-61152603 None:intergenic 40.0%
GGAAGCAATAATCACGAGAT+CGG - chr1.3:61151934-61151953 MS.gene20891:CDS 40.0%
GGTAGAGAATTCCCTTAGAA+AGG - chr1.3:61153311-61153330 MS.gene20891:intron 40.0%
TACAGCATCTCAATTTCCGT+TGG + chr1.3:61154289-61154308 None:intergenic 40.0%
TAGATGCCAATTGGGTTTGA+TGG - chr1.3:61152098-61152117 MS.gene20891:CDS 40.0%
TATCAAAGCAGTAAGAGCTG+TGG + chr1.3:61153397-61153416 None:intergenic 40.0%
TATTAGCTATGGAGAGGAGA+AGG - chr1.3:61153727-61153746 MS.gene20891:intron 40.0%
TCATCTTCCATGTATCTACG+TGG + chr1.3:61153013-61153032 None:intergenic 40.0%
TCCTCAAACCTTTACGAACA+AGG + chr1.3:61154130-61154149 None:intergenic 40.0%
TGCTTCTTTCAGGCTTCTAA+TGG - chr1.3:61153782-61153801 MS.gene20891:intron 40.0%
TTCTTTCAGGCTTCTAATGG+TGG - chr1.3:61153785-61153804 MS.gene20891:intron 40.0%
TTGTAGCTTGAGAAGCTTGT+TGG - chr1.3:61154328-61154347 MS.gene20891:CDS 40.0%
TTGTTCGTAAAGGTTTGAGG+AGG - chr1.3:61154129-61154148 MS.gene20891:intron 40.0%
! CCTAAACCAAGTGCCTTTTA+TGG - chr1.3:61153085-61153104 MS.gene20891:intron 40.0%
! TGAGCTTTGGCAAATGTATC+AGG - chr1.3:61153167-61153186 MS.gene20891:CDS 40.0%
!! ATCAGTTACAAGAGCACTAG+GGG - chr1.3:61153956-61153975 MS.gene20891:intron 40.0%
!! ATTACCCCATAAAAGGCACT+TGG + chr1.3:61153094-61153113 None:intergenic 40.0%
!! CCATAAAAGGCACTTGGTTT+AGG + chr1.3:61153088-61153107 None:intergenic 40.0%
!! GGGTACTATTAGGTTGAAAG+AGG - chr1.3:61153516-61153535 MS.gene20891:intron 40.0%
!!! GGTAATGAGCTTTTTCACCT+AGG - chr1.3:61153108-61153127 MS.gene20891:intron 40.0%
!!! TGACTTCTATTTTGGGATCG+AGG - chr1.3:61152172-61152191 MS.gene20891:CDS 40.0%
ACAGATATAACCTCGGAAGC+TGG - chr1.3:61152923-61152942 MS.gene20891:CDS 45.0%
ACTGGGACATGAAGTTACCT+AGG - chr1.3:61153979-61153998 MS.gene20891:intron 45.0%
AGAATTGGGTGGCTATGTTG+AGG - chr1.3:61153911-61153930 MS.gene20891:intron 45.0%
AGGATCTGCAATCAAAGGTG+AGG + chr1.3:61154012-61154031 None:intergenic 45.0%
AGGATGACATATCTGCTAGC+AGG - chr1.3:61152485-61152504 MS.gene20891:intron 45.0%
AGTTCTCAGTCGTAAAGGAG+AGG - chr1.3:61153830-61153849 MS.gene20891:intron 45.0%
CAGCATCTCAATTTCCGTTG+GGG + chr1.3:61154287-61154306 None:intergenic 45.0%
CATCCTCTGTTAGAACCACT+TGG + chr1.3:61154043-61154062 None:intergenic 45.0%
CTATTTATCCATCAGAGCGG+AGG - chr1.3:61153880-61153899 MS.gene20891:intron 45.0%
CTGGGACATGAAGTTACCTA+GGG - chr1.3:61153980-61153999 MS.gene20891:intron 45.0%
CTTATATACGCTGCAGCTTC+AGG + chr1.3:61153213-61153232 None:intergenic 45.0%
CTTCTAATGGTGGCAAATGC+CGG - chr1.3:61153795-61153814 MS.gene20891:intron 45.0%
CTTTACGACTGAGAACTGCT+CGG + chr1.3:61153827-61153846 None:intergenic 45.0%
GGATCTGCAATCAAAGGTGA+GGG + chr1.3:61154011-61154030 None:intergenic 45.0%
GGCCTATTTATCCATCAGAG+CGG - chr1.3:61153877-61153896 MS.gene20891:intron 45.0%
TGCCTCCATAACTAAATCCC+TGG + chr1.3:61154177-61154196 None:intergenic 45.0%
TGGGACATGAAGTTACCTAG+GGG - chr1.3:61153981-61154000 MS.gene20891:intron 45.0%
TGTTGTGTGTCAACAAAGCG+TGG - chr1.3:61151888-61151907 MS.gene20891:CDS 45.0%
TTCCTCATCATAGGATGCGA+CGG - chr1.3:61154068-61154087 MS.gene20891:intron 45.0%
! CTCCGCTCTGATGGATAAAT+AGG + chr1.3:61153882-61153901 None:intergenic 45.0%
! GAAGGTAGGTCCATCCTTTT+AGG - chr1.3:61153421-61153440 MS.gene20891:intron 45.0%
! GCCTTGTTCGTAAAGGTTTG+AGG - chr1.3:61154126-61154145 MS.gene20891:intron 45.0%
! TCTTTTGGCAGACTCAGCTT+TGG - chr1.3:61153338-61153357 MS.gene20891:intron 45.0%
!! AGCTTGAGAAGCTTGTTGGA+AGG - chr1.3:61154332-61154351 MS.gene20891:CDS 45.0%
!! GCTGTTAGCCTTGTTCGTAA+AGG - chr1.3:61154119-61154138 MS.gene20891:intron 45.0%
!!! GGTCCATCCTTTTAGGTTCT+TGG - chr1.3:61153428-61153447 MS.gene20891:intron 45.0%
AAAACTACCGGAACGGATGG+AGG + chr1.3:61152978-61152997 None:intergenic 50.0%
AAACTACCGGAACGGATGGA+GGG + chr1.3:61152977-61152996 None:intergenic 50.0%
AGATCCTGAGTTCCACCAAG+TGG - chr1.3:61154025-61154044 MS.gene20891:intron 50.0%
AGATTCAAGACCAGCTTCCG+AGG + chr1.3:61152936-61152955 None:intergenic 50.0%
CATCTCAATTTCCGTTGGGG+AGG + chr1.3:61154284-61154303 None:intergenic 50.0%
CATTGGGCCACGTAGATACA+TGG - chr1.3:61153003-61153022 MS.gene20891:CDS 50.0%
CCCAATGTCGGCAAAACTAC+CGG + chr1.3:61152990-61153009 None:intergenic 50.0%
CCTCTGTTAGAACCACTTGG+TGG + chr1.3:61154040-61154059 None:intergenic 50.0%
CGAGCAGTTCTCAGTCGTAA+AGG - chr1.3:61153825-61153844 MS.gene20891:intron 50.0%
CGCCAGGGATTTAGTTATGG+AGG - chr1.3:61154172-61154191 MS.gene20891:intron 50.0%
GTATCTACGTGGCCCAATGT+CGG + chr1.3:61153002-61153021 None:intergenic 50.0%
GTGCGCCAGGGATTTAGTTA+TGG - chr1.3:61154169-61154188 MS.gene20891:intron 50.0%
TACAAAGAGCCTCTGCAGAG+AGG + chr1.3:61154313-61154332 None:intergenic 50.0%
TCTAGGTAGCCAATCCCTCT+AGG - chr1.3:61153676-61153695 MS.gene20891:intron 50.0%
TGTCGGCAAAACTACCGGAA+CGG + chr1.3:61152985-61153004 None:intergenic 50.0%
TTGGGTGGCTATGTTGAGGA+TGG - chr1.3:61153915-61153934 MS.gene20891:intron 50.0%
! AGAACCACTTGGTGGAACTC+AGG + chr1.3:61154032-61154051 None:intergenic 50.0%
! AGGCGAGTTGAAGAATTGGG+TGG - chr1.3:61153900-61153919 MS.gene20891:intron 50.0%
! CAGGTATTTGATGGTCACGG+AGG - chr1.3:61153186-61153205 MS.gene20891:CDS 50.0%
! CGGAGGCGAGTTGAAGAATT+GGG - chr1.3:61153897-61153916 MS.gene20891:intron 50.0%
!! CCACCAAGTGGTTCTAACAG+AGG - chr1.3:61154037-61154056 MS.gene20891:intron 50.0%
!! CCGGTAGTTTTGCCGACATT+GGG - chr1.3:61152987-61153006 MS.gene20891:CDS 50.0%
!! GGAAGCTGGTCTTGAATCTG+CGG - chr1.3:61152937-61152956 MS.gene20891:CDS 50.0%
!! TACAAGAGCACTAGGGGACT+GGG - chr1.3:61153962-61153981 MS.gene20891:intron 50.0%
!! TCCGGTAGTTTTGCCGACAT+TGG - chr1.3:61152986-61153005 MS.gene20891:CDS 50.0%
!! TTACAAGAGCACTAGGGGAC+TGG - chr1.3:61153961-61153980 MS.gene20891:intron 50.0%
AAATCCCTGGCGCACTTCTC+TGG + chr1.3:61154164-61154183 None:intergenic 55.0%
AACTACCGGAACGGATGGAG+GGG + chr1.3:61152976-61152995 None:intergenic 55.0%
AATCCCTGGCGCACTTCTCT+GGG + chr1.3:61154163-61154182 None:intergenic 55.0%
ATGCTGTAGCCTCTCTGCAG+AGG - chr1.3:61154301-61154320 MS.gene20891:CDS 55.0%
CATAGGATGCGACGGCATCT+GGG - chr1.3:61154076-61154095 MS.gene20891:intron 55.0%
CTCAATTTCCGTTGGGGAGG+TGG + chr1.3:61154281-61154300 None:intergenic 55.0%
CTCTGACTCCCCATGGTCAA+GGG + chr1.3:61154252-61154271 None:intergenic 55.0%
GGCAAAACTACCGGAACGGA+TGG + chr1.3:61152981-61153000 None:intergenic 55.0%
TCATAGGATGCGACGGCATC+TGG - chr1.3:61154075-61154094 MS.gene20891:intron 55.0%
TGCCGTCGCATCCTATGATG+AGG + chr1.3:61154073-61154092 None:intergenic 55.0%
TTTGTCCCCTCCATCCGTTC+CGG - chr1.3:61152968-61152987 MS.gene20891:CDS 55.0%
! GCGGAGGCGAGTTGAAGAAT+TGG - chr1.3:61153896-61153915 MS.gene20891:intron 55.0%
!! AAAGGTGAGGGAGTACCCCT+AGG + chr1.3:61153999-61154018 None:intergenic 55.0%
AGCCATCACCACCTCCCCAA+CGG - chr1.3:61154270-61154289 MS.gene20891:CDS 60.0%
CCTCTCCTCCCTTGACCATG+GGG - chr1.3:61154241-61154260 MS.gene20891:CDS 60.0%
GAGAACTGCTCGGCAGTCAC+CGG + chr1.3:61153817-61153836 None:intergenic 60.0%
GCCTCTCCTCCCTTGACCAT+GGG - chr1.3:61154240-61154259 MS.gene20891:CDS 60.0%
GCTCTGACTCCCCATGGTCA+AGG + chr1.3:61154253-61154272 None:intergenic 60.0%
TCAACTCGCCTCCGCTCTGA+TGG + chr1.3:61153891-61153910 None:intergenic 60.0%
TGACTCCCCATGGTCAAGGG+AGG + chr1.3:61154249-61154268 None:intergenic 60.0%
TGCCTCTCCTCCCTTGACCA+TGG - chr1.3:61154239-61154258 MS.gene20891:CDS 60.0%
TTCCGTTGGGGAGGTGGTGA+TGG + chr1.3:61154275-61154294 None:intergenic 60.0%
! ATGACCCAGAGAAGTGCGCC+AGG - chr1.3:61154156-61154175 MS.gene20891:intron 60.0%
! TGACCCAGAGAAGTGCGCCA+GGG - chr1.3:61154157-61154176 MS.gene20891:intron 60.0%
!! GTGATGGCTCTGACTCCCCA+TGG + chr1.3:61154259-61154278 None:intergenic 60.0%
CCCCATGGTCAAGGGAGGAG+AGG + chr1.3:61154244-61154263 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 61151868 61154370 61151868 ID=MS.gene20891
chr1.3 mRNA 61151868 61154370 61151868 ID=MS.gene20891.t1;Parent=MS.gene20891
chr1.3 exon 61154209 61154370 61154209 ID=MS.gene20891.t1.exon1;Parent=MS.gene20891.t1
chr1.3 CDS 61154209 61154370 61154209 ID=cds.MS.gene20891.t1;Parent=MS.gene20891.t1
chr1.3 exon 61153130 61153327 61153130 ID=MS.gene20891.t1.exon2;Parent=MS.gene20891.t1
chr1.3 CDS 61153130 61153327 61153130 ID=cds.MS.gene20891.t1;Parent=MS.gene20891.t1
chr1.3 exon 61152814 61153049 61152814 ID=MS.gene20891.t1.exon3;Parent=MS.gene20891.t1
chr1.3 CDS 61152814 61153049 61152814 ID=cds.MS.gene20891.t1;Parent=MS.gene20891.t1
chr1.3 exon 61151868 61152444 61151868 ID=MS.gene20891.t1.exon4;Parent=MS.gene20891.t1
chr1.3 CDS 61151868 61152444 61151868 ID=cds.MS.gene20891.t1;Parent=MS.gene20891.t1
Gene Sequence

>MS.gene20891

ATGGTGGCTGAAGCAGAGGTTGTTGTGTGTCAACAAAGCGTGGATGTGAAGTATTTTCCGAATAAAGGAAGCAATAATCACGAGATCGGTGATGTAGATTCGAATTTTGATCGAGTTCGTGTTTCTGAATCAGTTTCTGCTGAGTTACTTACTACAAAAGAAGTTAGTTTTTTCAGATACCCTTTTGAGAATTTCTTCTGTTTTTGGTGATTTTGTTTTGTTGGATGATATAGATGCCAATTGGGTTTGATGGGTTTCTTTCTTTCTCTTGGTTTGTGATGTTTGATCATTTGATGTGAATTCTTGACTTCTATTTTGGGATCGAGGTTCTAACATAAATAAAAAGAAAAACAAATTTGGAAACTTTTGGATCAGTAATCTGTTTATATGCTGAATTTGATTGATCTTAGAAGGAGATACCTGAATTTTGATAATTTAGTTTAGATTTTTTATTTAGCTTAGAAATTGGACTTATATATTTAGTTTAGTCCAATTTATTTTTATGATGATCCAAATTTTTTTTAGAACAAGGGAATCTCTCTCTATCCAGTTGAAATTGAGTTTCTTTGTGAGGTTTGATATGTGTGTGATGGATCTTAAAGTAGTTGATACCAAGAAGGATGACATATCTGCTAGCAGGCATATGTTGTTGATCAAGTAATTTAACATTAGATTTTCAAAATTGTGATTGTAATTTGATTGGTAGTTTATAACCTTCATTGTTGAGGTTATGTGCAGTCAAAATATTTGCAGCCATTATTAGTATTAAATGATCCATGCCTAGAAAACTAACTTCTCTTCAATGTGACTGAAGAACTTAGGGATAGCCATTATTAGTTGCAGCATATTTTTTTTTTTCTTTTCATTTCTCATGTGGTAGTTTGAAGCATTTTGTTTTTCTGTGTATCTAGACTAGTCTAGTCTAACGTCAAAAAAAAAAAAAAAAAGACTAGTCTAGTCTAGTCTCAAGCTACACTAAATAGTGCATTTTAGATACTTATGATTCTCACTTTTCTGATTTGCGTTTAATTATTTTGGTGTAGGATGTTAAGACTACAGATATAACCTCGGAAGCTGGTCTTGAATCTGCGGTTCTGCAATTTGTCCCCTCCATCCGTTCCGGTAGTTTTGCCGACATTGGGCCACGTAGATACATGGAAGATGAACATATAAGGATAGATGATTTGTCATCTCATCTGGGATCACAATACAATTTTCCTAAACCAAGTGCCTTTTATGGGGTAATGAGCTTTTTCACCTAGGTCTCTTGATTATGTTTAATCTCATTGTAAATCTAATTGAGCTTTGGCAAATGTATCAGGTATTTGATGGTCACGGAGGACCTGAAGCTGCAGCGTATATAAGAAAAAATGTTCTAAAATTCTTCTTTGAGGATGTCAATTTCCCTCAGATATCTGAAGTTGATAATGTATTTTTACAAGAGGTAGAGAATTCCCTTAGAAAGGCTTTTCTTTTGGCAGACTCAGCTTTGGCTGATGATAGCAATGTGAACACTTCATCAGGGACCACAGCTCTTACTGCTTTGATATTTGGAAGGTAGGTCCATCCTTTTAGGTTCTTGGTTTTTCTTTTTAGTCCACTATCTAATGTTTATTTCTTTTGTACATTTGTAATGGCTATAATGTATGGGTACTATTAGGTTGAAAGAGGATAAGGATAACTACATCTCAAACAATTAAGAAGTATTTGAAGTTAATGAATTTCACTTCATTGAACATGTTTCATTACACTAAACATGTTTCATTAGATATGGTTCGTGATTGGATATTATGTATGACACTGTATGATCTAGGTAGCCAATCCCTCTAGGTAGAAGAATAAAAAAACTCTGGTTGTTGTATTAGCTATGGAGAGGAGAAGGCCTCCCTTTGTTTGTTTAACTGACTTCTAATATGCTTCTTTCAGGCTTCTAATGGTGGCAAATGCCGGTGACTGCCGAGCAGTTCTCAGTCGTAAAGGAGAGGCCATTGACATGTCTCAAGATCATAGGCCTATTTATCCATCAGAGCGGAGGCGAGTTGAAGAATTGGGTGGCTATGTTGAGGATGGTTATCTTAATGGCGTTTTATCAGTTACAAGAGCACTAGGGGACTGGGACATGAAGTTACCTAGGGGTACTCCCTCACCTTTGATTGCAGATCCTGAGTTCCACCAAGTGGTTCTAACAGAGGATGACGAATTCCTCATCATAGGATGCGACGGCATCTGGGATGTGATGACAAGTCAGCATGCTGTTAGCCTTGTTCGTAAAGGTTTGAGGAGGCATGATGACCCAGAGAAGTGCGCCAGGGATTTAGTTATGGAGGCATTACGGCTCAACACATTTGACAATCTTACAGTGATCATCATATGCCTCTCCTCCCTTGACCATGGGGAGTCAGAGCCATCACCACCTCCCCAACGGAAATTGAGATGCTGTAGCCTCTCTGCAGAGGCTCTTTGTAGCTTGAGAAGCTTGTTGGAAGGCAATGCTAGCAACTGA
Protein sequence

>MS.gene20891.t1

MVAEAEVVVCQQSVDVKYFPNKGSNNHEIGDVDSNFDRVRVSESVSAELLTTKEDVKTTDITSEAGLESAVLQFVPSIRSGSFADIGPRRYMEDEHIRIDDLSSHLGSQYNFPKPSAFYGVFDGHGGPEAAAYIRKNVLKFFFEDVNFPQISEVDNVFLQEVENSLRKAFLLADSALADDSNVNTSSGTTALTALIFGRLLMVANAGDCRAVLSRKGEAIDMSQDHRPIYPSERRRVEELGGYVEDGYLNGVLSVTRALGDWDMKLPRGTPSPLIADPEFHQVVLTEDDEFLIIGCDGIWDVMTSQHAVSLVRKGLRRHDDPEKCARDLVMEALRLNTFDNLTVIIICLSSLDHGESEPSPPPQRKLRCCSLSAEALCSLRSLLEGNASN