Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32891.t1 | XP_024634192.1 | 97.5 | 917 | 20 | 1 | 1 | 917 | 1 | 914 | 0.00E+00 | 1565.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32891.t1 | F4K4L7 | 40.5 | 962 | 404 | 24 | 1 | 906 | 1 | 850 | 4.1e-122 | 440.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32891.t1 | A0A396IXC6 | 97.5 | 917 | 20 | 1 | 1 | 917 | 1 | 914 | 0.0e+00 | 1565.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049300 | MS.gene32891 | 0.800977 | 1.12E-48 | -1.69E-46 |
| MS.gene050258 | MS.gene32891 | 0.823357 | 1.45E-53 | -1.69E-46 |
| MS.gene054939 | MS.gene32891 | 0.812923 | 3.32E-51 | -1.69E-46 |
| MS.gene054940 | MS.gene32891 | 0.808767 | 2.63E-50 | -1.69E-46 |
| MS.gene05686 | MS.gene32891 | 0.811938 | 5.45E-51 | -1.69E-46 |
| MS.gene060962 | MS.gene32891 | 0.810151 | 1.33E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32891.t1 | MTR_3g102840 | 98.997 | 299 | 3 | 0 | 568 | 866 | 1 | 299 | 0.0 | 607 |
| MS.gene32891.t1 | MTR_3g102910 | 69.275 | 345 | 91 | 1 | 173 | 517 | 1 | 330 | 1.69e-160 | 476 |
| MS.gene32891.t1 | MTR_3g102940 | 87.019 | 208 | 26 | 1 | 227 | 433 | 1 | 208 | 1.07e-121 | 368 |
| MS.gene32891.t1 | MTR_3g102950 | 69.668 | 211 | 47 | 2 | 215 | 412 | 26 | 232 | 1.81e-84 | 271 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene32891.t1 | AT5G43130 | 45.464 | 937 | 364 | 26 | 1 | 906 | 1 | 821 | 0.0 | 619 |
| MS.gene32891.t1 | AT5G43130 | 44.491 | 962 | 366 | 27 | 1 | 906 | 1 | 850 | 0.0 | 607 |
| MS.gene32891.t1 | AT5G43130 | 45.074 | 883 | 344 | 25 | 1 | 853 | 1 | 772 | 0.0 | 564 |
| MS.gene32891.t1 | AT1G27720 | 36.629 | 789 | 367 | 22 | 150 | 914 | 1 | 680 | 4.66e-113 | 362 |
| MS.gene32891.t1 | AT1G27720 | 36.629 | 789 | 367 | 22 | 150 | 914 | 26 | 705 | 8.58e-113 | 362 |
| MS.gene32891.t1 | AT1G27720 | 37.032 | 775 | 355 | 22 | 164 | 914 | 55 | 720 | 3.65e-112 | 361 |
| MS.gene32891.t1 | AT1G27720 | 37.013 | 770 | 352 | 22 | 169 | 914 | 2 | 662 | 1.15e-110 | 355 |
| MS.gene32891.t1 | AT1G27720 | 37.013 | 770 | 352 | 22 | 169 | 914 | 2 | 662 | 1.15e-110 | 355 |
| MS.gene32891.t1 | AT1G27720 | 37.917 | 720 | 316 | 20 | 218 | 914 | 46 | 657 | 2.24e-109 | 352 |
| MS.gene32891.t1 | AT1G27720 | 34.816 | 652 | 329 | 18 | 150 | 777 | 26 | 605 | 6.47e-85 | 285 |
| MS.gene32891.t1 | AT1G27720 | 35.229 | 633 | 314 | 18 | 169 | 777 | 2 | 562 | 5.70e-83 | 278 |
| MS.gene32891.t1 | AT1G27720 | 35.229 | 633 | 314 | 18 | 169 | 777 | 2 | 562 | 5.70e-83 | 278 |
Find 210 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAACAGCGGCTAGGAAATT+TGG | 0.161653 | 3.1:-81435781 | MS.gene32891:intron |
| CTGTTAGTGGTGTTGATCTT+AGG | 0.200282 | 3.1:-81438403 | MS.gene32891:CDS |
| TCAGACTTTCCTCCTCTTCT+TGG | 0.210744 | 3.1:+81438214 | None:intergenic |
| GGGTTGCCTTCTGTTAATTC+TGG | 0.221734 | 3.1:-81439804 | MS.gene32891:CDS |
| CACACCAAACTTCAAATTCT+TGG | 0.235872 | 3.1:-81439941 | MS.gene32891:CDS |
| TGCCCTGTCCTTGGGAAGTT+GGG | 0.254860 | 3.1:+81440891 | None:intergenic |
| GCTGCTGTTGCTGCTTATTA+AGG | 0.269901 | 3.1:+81440204 | None:intergenic |
| AACCCACATCATTTAGTTTC+CGG | 0.293138 | 3.1:+81437626 | None:intergenic |
| GCAAAATGGGAAGCAGTATT+TGG | 0.299631 | 3.1:+81439669 | None:intergenic |
| GTGCCTCAAGTGGTTTCTTC+TGG | 0.299881 | 3.1:+81438608 | None:intergenic |
| GGAAGTTGGGGAATCAATAT+AGG | 0.315128 | 3.1:+81440904 | None:intergenic |
| AACATCAGCAGAACAAAATT+CGG | 0.318096 | 3.1:-81439916 | MS.gene32891:CDS |
| GTAACAGTTGGCATCCTTAC+AGG | 0.319184 | 3.1:+81440485 | None:intergenic |
| TCGAGAAGCTTTACTATAGA+TGG | 0.322150 | 3.1:+81441595 | None:intergenic |
| AAAACCAATACAGGTTCTTC+TGG | 0.332997 | 3.1:-81440518 | MS.gene32891:CDS |
| GATCCACCTGGCATTCTCTT+AGG | 0.334735 | 3.1:+81439993 | None:intergenic |
| TCGATACAAGAGTGATGATT+TGG | 0.350173 | 3.1:+81435666 | None:intergenic |
| AGCCGGACAAAATGTTCTTT+AGG | 0.366896 | 3.1:+81440686 | None:intergenic |
| GCATACTGAGATTGTTCATT+GGG | 0.368010 | 3.1:+81441024 | None:intergenic |
| CAACAGCGGCTAGGAAATTT+GGG | 0.376940 | 3.1:-81435780 | MS.gene32891:intron |
| ACTGATATCCATAGTTGAAT+AGG | 0.377720 | 3.1:+81440340 | None:intergenic |
| TTTGTGCTCCTTCCTGATGA+TGG | 0.388806 | 3.1:+81437100 | None:intergenic |
| CAGATCCCAACTAGCACTTC+TGG | 0.390772 | 3.1:-81438670 | MS.gene32891:CDS |
| GTAATGCATTGTAGGTGAAC+AGG | 0.394225 | 3.1:-81437303 | MS.gene32891:intron |
| TGAGATTGTTGATGAGAAAC+AGG | 0.395078 | 3.1:+81441114 | None:intergenic |
| TAATTCTGGTCAAAATGAAC+AGG | 0.399230 | 3.1:-81439790 | MS.gene32891:CDS |
| TGAAACTCGACTGTCATCCT+TGG | 0.401173 | 3.1:+81438257 | None:intergenic |
| GATCTGGTTGAGATGCAAAA+TGG | 0.404769 | 3.1:+81439655 | None:intergenic |
| GAGGATGAAACTATGCATTC+AGG | 0.420773 | 3.1:-81441565 | MS.gene32891:CDS |
| CGTAGTAAACAGGTACCATT+TGG | 0.423941 | 3.1:-81440937 | MS.gene32891:CDS |
| TGGCAGCCCGAGCTGCTGTT+GGG | 0.426995 | 3.1:-81437243 | MS.gene32891:CDS |
| TTTGCCAAGAATTTGAAGTT+TGG | 0.427441 | 3.1:+81439937 | None:intergenic |
| GAAACAAAAGGTGTCATCTC+TGG | 0.429956 | 3.1:-81438459 | MS.gene32891:CDS |
| TGTTAGTGGTGTTGATCTTA+GGG | 0.434851 | 3.1:-81438402 | MS.gene32891:intron |
| CATAATTAGAATGTCAAAAC+AGG | 0.436843 | 3.1:-81437857 | MS.gene32891:intron |
| GGAGAGATTCGTCTTGTGAT+TGG | 0.437581 | 3.1:+81441151 | None:intergenic |
| TTTAGCTCCGTTTCGGAAGA+AGG | 0.439250 | 3.1:+81441249 | None:intergenic |
| CATCATTTATCTAAGTTGCA+TGG | 0.441846 | 3.1:-81439825 | MS.gene32891:CDS |
| TGCTCAATAGAAAGGTCATT+AGG | 0.442499 | 3.1:+81439858 | None:intergenic |
| TTGCCCTGTCCTTGGGAAGT+TGG | 0.442748 | 3.1:+81440890 | None:intergenic |
| TTGACTAACAGCAATAGAAC+TGG | 0.444515 | 3.1:+81440259 | None:intergenic |
| AATTGATGGCTGAGCAAGCC+AGG | 0.445191 | 3.1:-81437195 | MS.gene32891:CDS |
| TGAGCCAACCTATTCAACTA+TGG | 0.449243 | 3.1:-81440348 | MS.gene32891:CDS |
| CCAAGTCAATCGTAGTAAAC+AGG | 0.449254 | 3.1:-81440947 | MS.gene32891:CDS |
| CCTGAGTTCCCAAGCGAAGT+TGG | 0.451526 | 3.1:+81437049 | None:intergenic |
| TTCCCCAACTTCCCAAGGAC+AGG | 0.451929 | 3.1:-81440894 | MS.gene32891:CDS |
| CGCAAATCTTCACCATCATC+AGG | 0.452328 | 3.1:-81437112 | MS.gene32891:CDS |
| AATGATGTTACGGCTGTTAG+TGG | 0.455727 | 3.1:-81438416 | MS.gene32891:CDS |
| GTATAGGTAGAGGGTAGTTC+CGG | 0.456726 | 3.1:-81437439 | MS.gene32891:intron |
| CCGGCTTATGAAAGGGATTG+TGG | 0.457315 | 3.1:-81440669 | MS.gene32891:CDS |
| TGCATACTGAGATTGTTCAT+TGG | 0.459463 | 3.1:+81441023 | None:intergenic |
| ACATCAGCAGAACAAAATTC+GGG | 0.460150 | 3.1:-81439915 | MS.gene32891:CDS |
| AGAAAAGGTCCAACTTCGCT+TGG | 0.461318 | 3.1:-81437058 | MS.gene32891:CDS |
| AGTTGCATTGCCCTGTCCTT+GGG | 0.462118 | 3.1:+81440883 | None:intergenic |
| TGACACCAGAAGTGCTAGTT+GGG | 0.464008 | 3.1:+81438665 | None:intergenic |
| CCAGACTGACTGTCAAAATC+AGG | 0.465391 | 3.1:-81441301 | MS.gene32891:CDS |
| AAGCCAGGCAGAAGCGTGAA+GGG | 0.465558 | 3.1:-81437180 | MS.gene32891:CDS |
| ATTAACAAAAGTGCAACAAC+AGG | 0.467853 | 3.1:-81440624 | MS.gene32891:intron |
| AGCAAATCATGACAATGAAT+AGG | 0.467989 | 3.1:-81437696 | MS.gene32891:CDS |
| AAGTTGCATTGCCCTGTCCT+TGG | 0.468973 | 3.1:+81440882 | None:intergenic |
| CCTGTTTACTACGATTGACT+TGG | 0.469413 | 3.1:+81440947 | None:intergenic |
| TAGGAAAGCAAGGGAAGAGT+GGG | 0.469487 | 3.1:-81437677 | MS.gene32891:CDS |
| TGATCAGCTTAATGATGTTA+CGG | 0.473692 | 3.1:-81438426 | MS.gene32891:CDS |
| AACTTTATTTAACAAATTGA+AGG | 0.475782 | 3.1:-81440857 | MS.gene32891:intron |
| ATCATTTATCTAAGTTGCAT+GGG | 0.476789 | 3.1:-81439824 | MS.gene32891:CDS |
| CACAAAAGATAATCAAGAAA+AGG | 0.477074 | 3.1:-81437083 | MS.gene32891:CDS |
| CTGTCCAGAAGAACCTGTAT+TGG | 0.477865 | 3.1:+81440514 | None:intergenic |
| TTCTGTATCGGTTCCACGAC+AGG | 0.479567 | 3.1:+81441216 | None:intergenic |
| ATACATTTCCCATCGACATA+TGG | 0.479887 | 3.1:-81440179 | MS.gene32891:CDS |
| GAAACTCGACTGTCATCCTT+GGG | 0.480685 | 3.1:+81438258 | None:intergenic |
| CGGCTTATGAAAGGGATTGT+GGG | 0.481586 | 3.1:-81440668 | MS.gene32891:CDS |
| CTTACAGAGACAGTTGGATC+TGG | 0.481792 | 3.1:+81439639 | None:intergenic |
| GTTCTTCCCCTCCTCCTCCA+AGG | 0.485579 | 3.1:-81438582 | MS.gene32891:intron |
| GTGGCAGCCCGAGCTGCTGT+TGG | 0.487103 | 3.1:-81437244 | MS.gene32891:CDS |
| AATCAAGAAAAGGAGAGAAA+AGG | 0.491500 | 3.1:-81437073 | MS.gene32891:CDS |
| GCAGCAGATGAGTAATCAAC+AGG | 0.495484 | 3.1:-81440995 | MS.gene32891:CDS |
| CTGAAGAAGCATTATGAGAA+TGG | 0.503259 | 3.1:+81440387 | None:intergenic |
| GAGGGTAGTTCCGGAGTTGA+TGG | 0.505527 | 3.1:-81437430 | MS.gene32891:CDS |
| CTACGATTGACTTGGCCACT+CGG | 0.505916 | 3.1:+81440955 | None:intergenic |
| GAAGGATGTAATTGCAGTCT+TGG | 0.506286 | 3.1:-81435707 | MS.gene32891:CDS |
| CTCCTTGTCACCATCAACTC+CGG | 0.506910 | 3.1:+81437420 | None:intergenic |
| CGAGAAGCTTTACTATAGAT+GGG | 0.507279 | 3.1:+81441596 | None:intergenic |
| ATGACTCACCTTGGAGGAGG+AGG | 0.509496 | 3.1:+81438574 | None:intergenic |
| TATGTTGCTGCTCAATAGAA+AGG | 0.510539 | 3.1:+81439850 | None:intergenic |
| GATGAGAAACAGGTAAAGTC+TGG | 0.511928 | 3.1:+81441124 | None:intergenic |
| ATCTGGTTGAGATGCAAAAT+GGG | 0.513802 | 3.1:+81439656 | None:intergenic |
| GCCAGGCAGAAGCGTGAAGG+GGG | 0.513828 | 3.1:-81437178 | MS.gene32891:CDS |
| GCTGTCAAAGTGGCAATTGA+TGG | 0.514119 | 3.1:-81437209 | MS.gene32891:CDS |
| ATAGGAAAGCAAGGGAAGAG+TGG | 0.515038 | 3.1:-81437678 | MS.gene32891:CDS |
| GATGAGTAATCAACAGGCCT+CGG | 0.515163 | 3.1:-81440989 | MS.gene32891:CDS |
| GCCCTGTCCTTGGGAAGTTG+GGG | 0.516262 | 3.1:+81440892 | None:intergenic |
| TCGATTCAAAGCAGCTTGGA+AGG | 0.517710 | 3.1:+81441528 | None:intergenic |
| ATTTAATGATCCCCATGCAT+TGG | 0.518932 | 3.1:-81440447 | MS.gene32891:CDS |
| ATCCTACAGTAAGAAACAAA+AGG | 0.523762 | 3.1:-81438471 | MS.gene32891:intron |
| GAAAAGGTCCAACTTCGCTT+GGG | 0.524007 | 3.1:-81437057 | MS.gene32891:CDS |
| CACTGCCTCCATATGTCGAT+GGG | 0.524966 | 3.1:+81440171 | None:intergenic |
| CAAGCCAGGCAGAAGCGTGA+AGG | 0.525670 | 3.1:-81437181 | MS.gene32891:CDS |
| GGTCAAAATGAACAGGGTAG+TGG | 0.525672 | 3.1:-81439783 | MS.gene32891:CDS |
| TCATTAAGCTGATCAATGCT+TGG | 0.527111 | 3.1:+81438434 | None:intergenic |
| CCAACTTCGCTTGGGAACTC+AGG | 0.532682 | 3.1:-81437049 | MS.gene32891:intron |
| GATACAGAATGTTGCCTCAC+AGG | 0.538041 | 3.1:-81441202 | MS.gene32891:CDS |
| GTGACCGAGTGTGGCTTGAA+AGG | 0.539175 | 3.1:-81438026 | MS.gene32891:CDS |
| GGCAGCCCGAGCTGCTGTTG+GGG | 0.539687 | 3.1:-81437242 | MS.gene32891:CDS |
| ATGACACCAGAAGTGCTAGT+TGG | 0.539850 | 3.1:+81438664 | None:intergenic |
| GAAGTTGGGGAATCAATATA+GGG | 0.541384 | 3.1:+81440905 | None:intergenic |
| AAGAAACCACTTGAGGCACT+TGG | 0.542539 | 3.1:-81438604 | MS.gene32891:CDS |
| AATGATCCTAAGAGAATGCC+AGG | 0.542547 | 3.1:-81439999 | MS.gene32891:CDS |
| AGGCTGAAACAGAAAAGCTC+CGG | 0.543349 | 3.1:-81437645 | MS.gene32891:CDS |
| TAACAGTTGGCATCCTTACA+GGG | 0.543436 | 3.1:+81440486 | None:intergenic |
| CACCTTTCTGATTCTGACGC+AGG | 0.544987 | 3.1:-81441478 | MS.gene32891:intron |
| ATAGGGAGCAACAAGCCAAA+TGG | 0.545091 | 3.1:+81440922 | None:intergenic |
| GAATCATGAGGATGAGGTTG+TGG | 0.546439 | 3.1:+81440092 | None:intergenic |
| CGAGGAACTAGTGGTTGTCC+CGG | 0.549173 | 3.1:+81440127 | None:intergenic |
| CCATCGACATATGGAGGCAG+TGG | 0.550413 | 3.1:-81440170 | MS.gene32891:CDS |
| TCTGATACTCCAACCGAATG+AGG | 0.551257 | 3.1:-81435625 | None:intergenic |
| GATGCAGTTGTGCCAATGCA+TGG | 0.551349 | 3.1:+81440435 | None:intergenic |
| ATTAAGGCCTTGCATGTGAA+CGG | 0.551684 | 3.1:+81440220 | None:intergenic |
| TGACAATGAATAGGAAAGCA+AGG | 0.552373 | 3.1:-81437687 | MS.gene32891:CDS |
| CAGGGTAGTGGTATCAATCA+AGG | 0.555328 | 3.1:-81439771 | MS.gene32891:CDS |
| CAAATTCCACATCAGAGCAT+TGG | 0.558546 | 3.1:-81440059 | MS.gene32891:CDS |
| AGCCAGGCAGAAGCGTGAAG+GGG | 0.558774 | 3.1:-81437179 | MS.gene32891:CDS |
| CCACAATCCCTTTCATAAGC+CGG | 0.559179 | 3.1:+81440669 | None:intergenic |
| ATGCAGTTGTGCCAATGCAT+GGG | 0.559800 | 3.1:+81440436 | None:intergenic |
| GACTCACCTTGGAGGAGGAG+GGG | 0.560269 | 3.1:+81438576 | None:intergenic |
| TTCTTTAGCATCCACTAGCA+TGG | 0.561413 | 3.1:-81439721 | MS.gene32891:CDS |
| CCACTGCCTCCATATGTCGA+TGG | 0.565191 | 3.1:+81440170 | None:intergenic |
| TGCTCGTAGCATCTCTGTGA+AGG | 0.565213 | 3.1:-81435725 | MS.gene32891:CDS |
| AATACTATGACTCACCTTGG+AGG | 0.566673 | 3.1:+81438568 | None:intergenic |
| AGAGCAACCTTCTTCCGAAA+CGG | 0.567565 | 3.1:-81441256 | MS.gene32891:CDS |
| AAACAGGTAAAGTCTGGCGT+TGG | 0.568838 | 3.1:+81441130 | None:intergenic |
| GAGTGTGGCTTGAAAGGCAT+GGG | 0.570129 | 3.1:-81438020 | MS.gene32891:CDS |
| TTGTAACTTACAGAGACAGT+TGG | 0.570686 | 3.1:+81439633 | None:intergenic |
| ATTGATTCCCCAACTTCCCA+AGG | 0.571713 | 3.1:-81440899 | MS.gene32891:CDS |
| GTTCCACTGGAAGTAACAGT+TGG | 0.572792 | 3.1:+81440473 | None:intergenic |
| TGACTCACCTTGGAGGAGGA+GGG | 0.573210 | 3.1:+81438575 | None:intergenic |
| ATATCCATAGTTGAATAGGT+TGG | 0.576764 | 3.1:+81440344 | None:intergenic |
| GCTGCTTTGAATCGAGACAT+TGG | 0.579443 | 3.1:-81441520 | MS.gene32891:CDS |
| TCTTGTTGCCAACAGCGGCT+AGG | 0.582888 | 3.1:-81435789 | MS.gene32891:intron |
| GCAGCCCGAGCTGCTGTTGG+GGG | 0.585228 | 3.1:-81437241 | MS.gene32891:CDS |
| TATCAATCAAGGCACTGTAA+AGG | 0.585256 | 3.1:-81439760 | MS.gene32891:CDS |
| AGGTTGGCTCACTCTTCACT+TGG | 0.586167 | 3.1:+81440360 | None:intergenic |
| GGCTTATGAAAGGGATTGTG+GGG | 0.586396 | 3.1:-81440667 | MS.gene32891:CDS |
| AGATCCGCCGTTCACATGCA+AGG | 0.588053 | 3.1:-81440227 | MS.gene32891:CDS |
| ATGCCAACTGTTACTTCCAG+TGG | 0.588289 | 3.1:-81440476 | MS.gene32891:CDS |
| GGGAAGTAGATGACAAAATG+AGG | 0.590649 | 3.1:-81437282 | MS.gene32891:CDS |
| CATGCCTTTCAAGCCACACT+CGG | 0.591412 | 3.1:+81438022 | None:intergenic |
| AAGAGTTGTCCAAGAAGAGG+AGG | 0.596851 | 3.1:-81438223 | MS.gene32891:CDS |
| GGTTTCTTCTGGCCAAGAGG+AGG | 0.597345 | 3.1:+81438619 | None:intergenic |
| TCGAAGAGTTGTCCAAGAAG+AGG | 0.598509 | 3.1:-81438226 | MS.gene32891:CDS |
| TGTGAGGCAACATTCTGTAT+CGG | 0.599712 | 3.1:+81441204 | None:intergenic |
| ACTATGACTCACCTTGGAGG+AGG | 0.599837 | 3.1:+81438571 | None:intergenic |
| AGTGATGATTTGGACATCTG+AGG | 0.600102 | 3.1:+81435676 | None:intergenic |
| ATGTAATTGCAGTCTTGGAG+AGG | 0.600412 | 3.1:-81435702 | MS.gene32891:CDS |
| GCTTTGAATCGAGACATTGG+CGG | 0.603368 | 3.1:-81441517 | MS.gene32891:CDS |
| TGTGGAAAGATGCTTGTCAC+TGG | 0.604950 | 3.1:-81437991 | MS.gene32891:intron |
| ACAGCAATAGAACTGGATGT+TGG | 0.608628 | 3.1:+81440266 | None:intergenic |
| GAAAGATGACGAGGAACTAG+TGG | 0.609193 | 3.1:+81440118 | None:intergenic |
| TGTCTCGATTCAAAGCAGCT+TGG | 0.610765 | 3.1:+81441524 | None:intergenic |
| TCCCCAACTTCCCAAGGACA+GGG | 0.611720 | 3.1:-81440893 | MS.gene32891:CDS |
| GACAATGAATAGGAAAGCAA+GGG | 0.612242 | 3.1:-81437686 | MS.gene32891:CDS |
| ATGTGTGAATCATGAGGATG+AGG | 0.613072 | 3.1:+81440086 | None:intergenic |
| GAGGACAAATGCTGCAAATG+TGG | 0.613322 | 3.1:-81437263 | MS.gene32891:CDS |
| TAATGCATTGTAGGTGAACA+GGG | 0.617187 | 3.1:-81437302 | MS.gene32891:intron |
| TCGACATATGGAGGCAGTGG+TGG | 0.618314 | 3.1:-81440167 | MS.gene32891:CDS |
| AAAACCACAAGGACCTGTCG+TGG | 0.618825 | 3.1:-81441229 | MS.gene32891:CDS |
| TGTTGTATGTGCCATGCTAG+TGG | 0.619948 | 3.1:+81439710 | None:intergenic |
| TCTTGTATCGAATGCATGAG+AGG | 0.620488 | 3.1:-81435654 | MS.gene32891:CDS |
| TGGTTGTCGTGACTCGAAGT+CGG | 0.622100 | 3.1:+81441321 | None:intergenic |
| TGTAATTGCAGTCTTGGAGA+GGG | 0.622189 | 3.1:-81435701 | MS.gene32891:CDS |
| AGTGGTTTCTTCTGGCCAAG+AGG | 0.622436 | 3.1:+81438616 | None:intergenic |
| TACCTGCGTCAGAATCAGAA+AGG | 0.624319 | 3.1:+81441476 | None:intergenic |
| TTCCGGAGTTGATGGTGACA+AGG | 0.629596 | 3.1:-81437422 | MS.gene32891:CDS |
| CATTTCCCATCGACATATGG+AGG | 0.629878 | 3.1:-81440176 | MS.gene32891:CDS |
| GGTGACAAGGAGAAAGATGA+GGG | 0.632650 | 3.1:-81437409 | MS.gene32891:CDS |
| TTTAGACCAATGCTCTGATG+TGG | 0.636526 | 3.1:+81440053 | None:intergenic |
| ACTCGGTTGTTCATTGACCG+AGG | 0.640052 | 3.1:+81440972 | None:intergenic |
| AGCATTGGTCTAAATCACTT+AGG | 0.640112 | 3.1:-81440044 | MS.gene32891:CDS |
| GAGATGACATGCTGTCAAAG+TGG | 0.640207 | 3.1:-81437219 | MS.gene32891:CDS |
| TGGTGACAAGGAGAAAGATG+AGG | 0.641020 | 3.1:-81437410 | MS.gene32891:CDS |
| GGGTCGTAATAAAGCAACAA+AGG | 0.644402 | 3.1:-81437389 | MS.gene32891:intron |
| CCAGGCAGAAGCGTGAAGGG+GGG | 0.644805 | 3.1:-81437177 | MS.gene32891:CDS |
| AATCTTCACCATCATCAGGA+AGG | 0.645878 | 3.1:-81437108 | MS.gene32891:CDS |
| ATCCTCATGATTCACACATG+AGG | 0.646639 | 3.1:-81440082 | MS.gene32891:CDS |
| GGTTCCACGACAGGTCCTTG+TGG | 0.653202 | 3.1:+81441225 | None:intergenic |
| AACAGTTGGCATCCTTACAG+GGG | 0.656796 | 3.1:+81440487 | None:intergenic |
| CGAGTGTGGCTTGAAAGGCA+TGG | 0.656819 | 3.1:-81438021 | MS.gene32891:CDS |
| GAAGAACCAAGTGCCTCAAG+TGG | 0.657729 | 3.1:+81438598 | None:intergenic |
| GAAAGGCATGGGTAATGATG+TGG | 0.658786 | 3.1:-81438009 | MS.gene32891:CDS |
| TGCAGTTGTGCCAATGCATG+GGG | 0.662938 | 3.1:+81440437 | None:intergenic |
| ACTCGAACATCATGTTCCTG+AGG | 0.664605 | 3.1:+81440308 | None:intergenic |
| AAAGCTTCTCGAAGACGATG+AGG | 0.666719 | 3.1:-81441584 | MS.gene32891:CDS |
| ATGTTGGCAGTGACCGAGTG+TGG | 0.669170 | 3.1:-81438035 | MS.gene32891:intron |
| TGGCCAGAAGAAACCACTTG+AGG | 0.672577 | 3.1:-81438611 | MS.gene32891:CDS |
| AAGATTACTTGCATCCTGTG+AGG | 0.677122 | 3.1:+81441188 | None:intergenic |
| ACAGTCGACACAGATCCACC+TGG | 0.678732 | 3.1:+81439981 | None:intergenic |
| AATTCTGGTCAAAATGAACA+GGG | 0.683557 | 3.1:-81439789 | MS.gene32891:CDS |
| AATTAATGTTCAGTGTGTGG+AGG | 0.687983 | 3.1:-81437905 | MS.gene32891:intron |
| TGACTCGAAGTCGGCCACGT+TGG | 0.691017 | 3.1:+81441330 | None:intergenic |
| ACAGTTGGCATCCTTACAGG+GGG | 0.692028 | 3.1:+81440488 | None:intergenic |
| TTGTGGTCTGAAAGATGACG+AGG | 0.696332 | 3.1:+81440109 | None:intergenic |
| AGGTGGATCTGTGTCGACTG+TGG | 0.697165 | 3.1:-81439979 | MS.gene32891:CDS |
| TGTGTGGAGGAAAGAATGCG+TGG | 0.701022 | 3.1:-81437892 | MS.gene32891:CDS |
| AAGGCCTTGCATGTGAACGG+CGG | 0.702296 | 3.1:+81440223 | None:intergenic |
| TGCCTCATGTGTGAATCATG+AGG | 0.714630 | 3.1:+81440080 | None:intergenic |
| ATATTGAGAAAACAAGACAT+CGG | 0.724469 | 3.1:-81437744 | MS.gene32891:CDS |
| GAAACGGAGCTAAAACCACA+AGG | 0.725936 | 3.1:-81441240 | MS.gene32891:CDS |
| GCTTATGAAAGGGATTGTGG+GGG | 0.734401 | 3.1:-81440666 | MS.gene32891:CDS |
| GATCCTAAGAGAATGCCAGG+TGG | 0.746632 | 3.1:-81439996 | MS.gene32891:CDS |
| TCGGTCAATGAACAACCGAG+TGG | 0.755898 | 3.1:-81440970 | MS.gene32891:CDS |
| TCAGTCAATCATTACCAACG+TGG | 0.781874 | 3.1:-81441344 | MS.gene32891:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATAAATAACTAAATG+TGG | - | chr3.1:81441151-81441170 | MS.gene32891:CDS | 10.0% |
| !! | TATTAAGATATCATTAAAAA+CGG | + | chr3.1:81438484-81438503 | None:intergenic | 10.0% |
| !!! | CTTCATTTTTTTTTTTTTTA+AGG | - | chr3.1:81435847-81435866 | MS.gene32891:intron | 10.0% |
| !!! | TTTCATATTACTAAAAATTT+TGG | - | chr3.1:81436477-81436496 | MS.gene32891:intron | 10.0% |
| !! | AAATTTACAAATTGACATAA+AGG | + | chr3.1:81439430-81439449 | None:intergenic | 15.0% |
| !! | ACTTACTAAATTTGAATATT+AGG | + | chr3.1:81440365-81440384 | None:intergenic | 15.0% |
| !! | TATATTATCAGATCTAAATA+GGG | - | chr3.1:81438100-81438119 | MS.gene32891:intron | 15.0% |
| !! | TGTAACAAATATTGAAATAT+GGG | + | chr3.1:81439273-81439292 | None:intergenic | 15.0% |
| !! | TTGTAACAAATATTGAAATA+TGG | + | chr3.1:81439274-81439293 | None:intergenic | 15.0% |
| !!! | AACTTTATTTAACAAATTGA+AGG | - | chr3.1:81436371-81436390 | MS.gene32891:intron | 15.0% |
| !! | AAAAAATTGAGGAAGAAAAT+TGG | - | chr3.1:81441058-81441077 | MS.gene32891:CDS | 20.0% |
| !! | AAACTGTTGTTAAACAAAAA+AGG | + | chr3.1:81441190-81441209 | None:intergenic | 20.0% |
| !! | AAAGAAAACAAAACAAGAAA+AGG | + | chr3.1:81437853-81437872 | None:intergenic | 20.0% |
| !! | AATAATCAAGAGTCAATTTA+TGG | - | chr3.1:81438074-81438093 | MS.gene32891:intron | 20.0% |
| !! | ACAAAAATTAAATTCCACAA+AGG | + | chr3.1:81439638-81439657 | None:intergenic | 20.0% |
| !! | CAAAAATTAAATTCCACAAA+GGG | + | chr3.1:81439637-81439656 | None:intergenic | 20.0% |
| !! | CTAACCTAATAAAATTGAAA+AGG | + | chr3.1:81438534-81438553 | None:intergenic | 20.0% |
| !! | CTATATTATCAGATCTAAAT+AGG | - | chr3.1:81438099-81438118 | MS.gene32891:intron | 20.0% |
| !! | TAAGTTAGTTCAATATATAC+TGG | + | chr3.1:81440503-81440522 | None:intergenic | 20.0% |
| !! | TGAAAACAAAAAAGAACATT+TGG | + | chr3.1:81437683-81437702 | None:intergenic | 20.0% |
| !! | TTATTTAACAAATTGAAGGT+GGG | - | chr3.1:81436375-81436394 | MS.gene32891:intron | 20.0% |
| !! | TTCACAAAATTATAACGATA+GGG | + | chr3.1:81437778-81437797 | None:intergenic | 20.0% |
| !! | TTTATTTAACAAATTGAAGG+TGG | - | chr3.1:81436374-81436393 | MS.gene32891:intron | 20.0% |
| !! | TTTCACAAAATTATAACGAT+AGG | + | chr3.1:81437779-81437798 | None:intergenic | 20.0% |
| !!! | AACTAACTTATAAGTTGTTT+TGG | - | chr3.1:81440513-81440532 | MS.gene32891:CDS | 20.0% |
| !!! | AATGTTCTTTTTTGTTTTCA+TGG | - | chr3.1:81437683-81437702 | MS.gene32891:CDS | 20.0% |
| !!! | AGAATAGATGTTTTTTCTTA+AGG | - | chr3.1:81436632-81436651 | MS.gene32891:intron | 20.0% |
| !!! | CTTGTTCATTTTTTTTTTCT+GGG | - | chr3.1:81438686-81438705 | MS.gene32891:intron | 20.0% |
| !!! | CTTTTCTGTTTTAAAATTTC+AGG | - | chr3.1:81438895-81438914 | MS.gene32891:intron | 20.0% |
| !!! | GGAATTTAATTTTTGTATAG+TGG | - | chr3.1:81439642-81439661 | MS.gene32891:intron | 20.0% |
| !!! | TAATGCTATTTTTTGAGTAT+AGG | - | chr3.1:81439773-81439792 | MS.gene32891:CDS | 20.0% |
| !!! | TTTCAATATTTGTTACAAGT+AGG | - | chr3.1:81439276-81439295 | MS.gene32891:intron | 20.0% |
| !!! | TTTTTGTGTTCTCTTTTTAT+AGG | - | chr3.1:81438921-81438940 | MS.gene32891:intron | 20.0% |
| !!! | TTTTTGTTCTTTTGATTTAG+AGG | - | chr3.1:81437871-81437890 | MS.gene32891:CDS | 20.0% |
| ! | AACTTATCTAGATATGTACT+TGG | - | chr3.1:81439136-81439155 | MS.gene32891:intron | 25.0% |
| ! | AATTGCAAAATAGATTCTTG+AGG | - | chr3.1:81441032-81441051 | MS.gene32891:CDS | 25.0% |
| ! | ACCTAATAAAATTGAAAAGG+AGG | + | chr3.1:81438531-81438550 | None:intergenic | 25.0% |
| ! | ACTTATCTAGATATGTACTT+GGG | - | chr3.1:81439137-81439156 | MS.gene32891:intron | 25.0% |
| ! | ATATTGAAGAAAACCATAGT+TGG | - | chr3.1:81438863-81438882 | MS.gene32891:intron | 25.0% |
| ! | ATATTGAGAAAACAAGACAT+CGG | - | chr3.1:81439484-81439503 | MS.gene32891:intron | 25.0% |
| ! | ATCATTTATCTAAGTTGCAT+GGG | - | chr3.1:81437404-81437423 | MS.gene32891:CDS | 25.0% |
| ! | ATCTAGATAAGTTTGAAGAA+TGG | + | chr3.1:81439129-81439148 | None:intergenic | 25.0% |
| ! | ATGACTTTCCACATATATAA+AGG | + | chr3.1:81439895-81439914 | None:intergenic | 25.0% |
| ! | CACAAAAGATAATCAAGAAA+AGG | - | chr3.1:81440145-81440164 | MS.gene32891:CDS | 25.0% |
| ! | CATAATTAGAATGTCAAAAC+AGG | - | chr3.1:81439371-81439390 | MS.gene32891:intron | 25.0% |
| ! | CTCTACTTCATATGTAAAAA+AGG | - | chr3.1:81437345-81437364 | MS.gene32891:intron | 25.0% |
| ! | GTGATGATCAATTGTATAAA+TGG | - | chr3.1:81441085-81441104 | MS.gene32891:CDS | 25.0% |
| ! | GTGCTGTGATATTTATAATA+GGG | + | chr3.1:81440767-81440786 | None:intergenic | 25.0% |
| ! | GTTACTCTCTATTAAAGAAT+AGG | + | chr3.1:81438310-81438329 | None:intergenic | 25.0% |
| ! | TATATTCAAACTAGTTAGTC+AGG | - | chr3.1:81440276-81440295 | MS.gene32891:CDS | 25.0% |
| ! | TATTGAAGAAAACCATAGTT+GGG | - | chr3.1:81438864-81438883 | MS.gene32891:intron | 25.0% |
| ! | TCACAAAATTATAACGATAG+GGG | + | chr3.1:81437777-81437796 | None:intergenic | 25.0% |
| ! | TGTGCTGTGATATTTATAAT+AGG | + | chr3.1:81440768-81440787 | None:intergenic | 25.0% |
| !! | AAGACTTTTTATGCATGTTT+AGG | + | chr3.1:81441292-81441311 | None:intergenic | 25.0% |
| !! | ATCATTAAATTTTGTTCCAC+TGG | + | chr3.1:81436771-81436790 | None:intergenic | 25.0% |
| !! | CTTTAAAAAGTAGCATGAAA+TGG | + | chr3.1:81438357-81438376 | None:intergenic | 25.0% |
| !! | TATTTGATCCCCAAAATTTT+AGG | + | chr3.1:81437656-81437675 | None:intergenic | 25.0% |
| !!! | ATAGATGTTTTTTCTTAAGG+TGG | - | chr3.1:81436635-81436654 | MS.gene32891:intron | 25.0% |
| !!! | ATGCTACTTTTTAAAGCATT+TGG | - | chr3.1:81438361-81438380 | MS.gene32891:intron | 25.0% |
| !!! | ATTTTTTGAGTATAGGTAGA+GGG | - | chr3.1:81439780-81439799 | MS.gene32891:CDS | 25.0% |
| !!! | CAATATATACTGGTTGATTT+TGG | + | chr3.1:81440493-81440512 | None:intergenic | 25.0% |
| !!! | CTTTTTTAAACACTTGCATT+CGG | - | chr3.1:81440882-81440901 | MS.gene32891:CDS | 25.0% |
| !!! | CTTTTTTACATATGAAGTAG+AGG | + | chr3.1:81437347-81437366 | None:intergenic | 25.0% |
| !!! | GCTCTTGTTAATATGTTTTT+TGG | - | chr3.1:81441119-81441138 | MS.gene32891:CDS | 25.0% |
| !!! | GCTTGTTCATTTTTTTTTTC+TGG | - | chr3.1:81438685-81438704 | MS.gene32891:intron | 25.0% |
| !!! | GTTTTAAATGATAAGCACAT+AGG | + | chr3.1:81439749-81439768 | None:intergenic | 25.0% |
| !!! | TATTTTTTGAGTATAGGTAG+AGG | - | chr3.1:81439779-81439798 | MS.gene32891:CDS | 25.0% |
| AACAGCTATAAGGTTTACAT+AGG | + | chr3.1:81439163-81439182 | None:intergenic | 30.0% | |
| AACATCAGCAGAACAAAATT+CGG | - | chr3.1:81437312-81437331 | MS.gene32891:intron | 30.0% | |
| AATAAAACTTTATAGCCCCA+TGG | - | chr3.1:81441331-81441350 | MS.gene32891:CDS | 30.0% | |
| AATCAAGAAAAGGAGAGAAA+AGG | - | chr3.1:81440155-81440174 | MS.gene32891:CDS | 30.0% | |
| AATTCTGGTCAAAATGAACA+GGG | - | chr3.1:81437439-81437458 | MS.gene32891:intron | 30.0% | |
| ACTGATATCCATAGTTGAAT+AGG | + | chr3.1:81436891-81436910 | None:intergenic | 30.0% | |
| AGCAAATCATGACAATGAAT+AGG | - | chr3.1:81439532-81439551 | MS.gene32891:intron | 30.0% | |
| ATATCCATAGTTGAATAGGT+TGG | + | chr3.1:81436887-81436906 | None:intergenic | 30.0% | |
| ATCCTACAGTAAGAAACAAA+AGG | - | chr3.1:81438757-81438776 | MS.gene32891:intron | 30.0% | |
| ATGGCAAAAACAAAATCAGA+TGG | + | chr3.1:81439110-81439129 | None:intergenic | 30.0% | |
| ATTGCCTCGTTGTTAAAAAT+GGG | + | chr3.1:81436171-81436190 | None:intergenic | 30.0% | |
| CAAACTTTAGTAGTTTAGCA+CGG | + | chr3.1:81436444-81436463 | None:intergenic | 30.0% | |
| CAAGCAGATTAATACTGTTT+GGG | + | chr3.1:81437725-81437744 | None:intergenic | 30.0% | |
| CACAAAATTATAACGATAGG+GGG | + | chr3.1:81437776-81437795 | None:intergenic | 30.0% | |
| CACACATATTGTATTGTATC+TGG | + | chr3.1:81441360-81441379 | None:intergenic | 30.0% | |
| CAGAAAAGAAAAAACAACAC+TGG | - | chr3.1:81440612-81440631 | MS.gene32891:intron | 30.0% | |
| CATCATTTATCTAAGTTGCA+TGG | - | chr3.1:81437403-81437422 | MS.gene32891:CDS | 30.0% | |
| GAAAATTAATGTTCAGTGTG+TGG | - | chr3.1:81439320-81439339 | MS.gene32891:intron | 30.0% | |
| GACAAAATACAACAGCTATA+AGG | + | chr3.1:81439173-81439192 | None:intergenic | 30.0% | |
| GACAGAGTAATGACATAAAT+AGG | + | chr3.1:81439088-81439107 | None:intergenic | 30.0% | |
| GCAATTCACCTTTATATATG+TGG | - | chr3.1:81439884-81439903 | MS.gene32891:CDS | 30.0% | |
| GTAATCACATTCATACATAG+TGG | - | chr3.1:81435813-81435832 | MS.gene32891:intron | 30.0% | |
| TAATTCTGGTCAAAATGAAC+AGG | - | chr3.1:81437438-81437457 | MS.gene32891:intron | 30.0% | |
| TAGGATTCCATGTAATCTAA+CGG | - | chr3.1:81439295-81439314 | MS.gene32891:intron | 30.0% | |
| TCAAGCAGATTAATACTGTT+TGG | + | chr3.1:81437726-81437745 | None:intergenic | 30.0% | |
| TGATCAGCTTAATGATGTTA+CGG | - | chr3.1:81438802-81438821 | MS.gene32891:intron | 30.0% | |
| TTTGGGAAAAATCATTCTCA+TGG | - | chr3.1:81441465-81441484 | MS.gene32891:intron | 30.0% | |
| ! | AAGTAGTGCCTAAAATTTTG+GGG | - | chr3.1:81437645-81437664 | MS.gene32891:CDS | 30.0% |
| ! | AGAAGTAGTGCCTAAAATTT+TGG | - | chr3.1:81437643-81437662 | MS.gene32891:CDS | 30.0% |
| ! | ATTAACAAAAGTGCAACAAC+AGG | - | chr3.1:81436604-81436623 | MS.gene32891:intron | 30.0% |
| ! | GAAGTAGTGCCTAAAATTTT+GGG | - | chr3.1:81437644-81437663 | MS.gene32891:CDS | 30.0% |
| ! | GCCTCCTTTTCAATTTTATT+AGG | - | chr3.1:81438527-81438546 | MS.gene32891:intron | 30.0% |
| ! | TACCTAAAGAACATTTTGTC+CGG | - | chr3.1:81436540-81436559 | MS.gene32891:intron | 30.0% |
| ! | TCAATCAATTTTCTCTGCAA+TGG | + | chr3.1:81439054-81439073 | None:intergenic | 30.0% |
| ! | TTGTGTTCTCTTTTTATAGG+AGG | - | chr3.1:81438924-81438943 | MS.gene32891:intron | 30.0% |
| ! | TTTGCCAAGAATTTGAAGTT+TGG | + | chr3.1:81437294-81437313 | None:intergenic | 30.0% |
| ! | TTTTGACCAGAATTAACAGA+AGG | + | chr3.1:81437433-81437452 | None:intergenic | 30.0% |
| !! | AGGAAGAACAGTTATTTTCT+GGG | - | chr3.1:81438947-81438966 | MS.gene32891:intron | 30.0% |
| !! | GATTAGTTTCAATCAGTTCT+TGG | + | chr3.1:81438036-81438055 | None:intergenic | 30.0% |
| !! | GTGGAAAGTCATGTTTTTAT+TGG | - | chr3.1:81439903-81439922 | MS.gene32891:CDS | 30.0% |
| !!! | AATATGTTTTTTGGCTCAAG+TGG | - | chr3.1:81441128-81441147 | MS.gene32891:CDS | 30.0% |
| !!! | TCTTGCTGTTGTTCAATTTT+AGG | + | chr3.1:81435955-81435974 | None:intergenic | 30.0% |
| AAAACCAATACAGGTTCTTC+TGG | - | chr3.1:81436710-81436729 | MS.gene32891:intron | 35.0% | |
| AAAGTATGTGTTCCCAACTA+TGG | + | chr3.1:81438879-81438898 | None:intergenic | 35.0% | |
| AATTAATGTTCAGTGTGTGG+AGG | - | chr3.1:81439323-81439342 | MS.gene32891:intron | 35.0% | |
| AATTCCACAAAGGGACAAAA+TGG | + | chr3.1:81439628-81439647 | None:intergenic | 35.0% | |
| ACAATGTAATCAGAACATGG+GGG | + | chr3.1:81441387-81441406 | None:intergenic | 35.0% | |
| ACACTTTCCTTGCATAAAAG+CGG | - | chr3.1:81440408-81440427 | MS.gene32891:CDS | 35.0% | |
| ACATCAGCAGAACAAAATTC+GGG | - | chr3.1:81437313-81437332 | MS.gene32891:intron | 35.0% | |
| ATACATTTCCCATCGACATA+TGG | - | chr3.1:81437049-81437068 | MS.gene32891:intron | 35.0% | |
| ATCTGGTTGAGATGCAAAAT+GGG | + | chr3.1:81437575-81437594 | None:intergenic | 35.0% | |
| ATTTAATGATCCCCATGCAT+TGG | - | chr3.1:81436781-81436800 | MS.gene32891:intron | 35.0% | |
| CAAAATACTATGACTCACCT+TGG | + | chr3.1:81438666-81438685 | None:intergenic | 35.0% | |
| CACAATGTAATCAGAACATG+GGG | + | chr3.1:81441388-81441407 | None:intergenic | 35.0% | |
| CACACCAAACTTCAAATTCT+TGG | - | chr3.1:81437287-81437306 | MS.gene32891:CDS | 35.0% | |
| CGAGAAGCTTTACTATAGAT+GGG | + | chr3.1:81435635-81435654 | None:intergenic | 35.0% | |
| CTAGGATTTGTAGCTTCTAA+CGG | - | chr3.1:81438126-81438145 | MS.gene32891:intron | 35.0% | |
| GAAGTTGGGGAATCAATATA+GGG | + | chr3.1:81436326-81436345 | None:intergenic | 35.0% | |
| GACAATGAATAGGAAAGCAA+GGG | - | chr3.1:81439542-81439561 | MS.gene32891:intron | 35.0% | |
| GATTGCCTCGTTGTTAAAAA+TGG | + | chr3.1:81436172-81436191 | None:intergenic | 35.0% | |
| GCACAATGTAATCAGAACAT+GGG | + | chr3.1:81441389-81441408 | None:intergenic | 35.0% | |
| GCATACTGAGATTGTTCATT+GGG | + | chr3.1:81436207-81436226 | None:intergenic | 35.0% | |
| GGAACCTAACGCAAAATTAT+AGG | + | chr3.1:81438336-81438355 | None:intergenic | 35.0% | |
| GGAATCAACTAACTTTCAGT+TGG | + | chr3.1:81438289-81438308 | None:intergenic | 35.0% | |
| TAATACTCTCTCCACATGAA+GGG | + | chr3.1:81438160-81438179 | None:intergenic | 35.0% | |
| TATCAGTGCTAAAAAACCTC+AGG | - | chr3.1:81436904-81436923 | MS.gene32891:intron | 35.0% | |
| TATGTTGCTGCTCAATAGAA+AGG | + | chr3.1:81437381-81437400 | None:intergenic | 35.0% | |
| TCATTAAGCTGATCAATGCT+TGG | + | chr3.1:81438797-81438816 | None:intergenic | 35.0% | |
| TCGAGAAGCTTTACTATAGA+TGG | + | chr3.1:81435636-81435655 | None:intergenic | 35.0% | |
| TCGATACAAGAGTGATGATT+TGG | + | chr3.1:81441565-81441584 | None:intergenic | 35.0% | |
| TCTTGAGGCAGAAAAAATTG+AGG | - | chr3.1:81441047-81441066 | MS.gene32891:CDS | 35.0% | |
| TGACAATGAATAGGAAAGCA+AGG | - | chr3.1:81439541-81439560 | MS.gene32891:intron | 35.0% | |
| TGCACAATGTAATCAGAACA+TGG | + | chr3.1:81441390-81441409 | None:intergenic | 35.0% | |
| TGCATACTGAGATTGTTCAT+TGG | + | chr3.1:81436208-81436227 | None:intergenic | 35.0% | |
| TGCTCAATAGAAAGGTCATT+AGG | + | chr3.1:81437373-81437392 | None:intergenic | 35.0% | |
| TTAATACTCTCTCCACATGA+AGG | + | chr3.1:81438161-81438180 | None:intergenic | 35.0% | |
| TTGACTAACAGCAATAGAAC+TGG | + | chr3.1:81436972-81436991 | None:intergenic | 35.0% | |
| TTGCAGACAAAAACCAATAC+AGG | - | chr3.1:81436701-81436720 | MS.gene32891:intron | 35.0% | |
| TTGTAACTTACAGAGACAGT+TGG | + | chr3.1:81437598-81437617 | None:intergenic | 35.0% | |
| TTTGTCCTTGCACATTTCTT+GGG | - | chr3.1:81439681-81439700 | MS.gene32891:CDS | 35.0% | |
| TTTGTCTGCAAGAAAAAGGA+CGG | + | chr3.1:81436692-81436711 | None:intergenic | 35.0% | |
| ! | AAAGGACATGATAGTGAAAC+TGG | + | chr3.1:81436410-81436429 | None:intergenic | 35.0% |
| ! | AACCCACATCATTTAGTTTC+CGG | + | chr3.1:81439605-81439624 | None:intergenic | 35.0% |
| ! | ATTTTGTCCGGCTTATGAAA+GGG | - | chr3.1:81436552-81436571 | MS.gene32891:intron | 35.0% |
| ! | CAAGCCTATAATTTTGCGTT+AGG | - | chr3.1:81438329-81438348 | MS.gene32891:intron | 35.0% |
| ! | CAGCACAGTACTGAAAATAT+TGG | - | chr3.1:81440781-81440800 | MS.gene32891:intron | 35.0% |
| ! | GCTGTTGTATTTTGTCATGT+TGG | - | chr3.1:81439177-81439196 | MS.gene32891:intron | 35.0% |
| ! | GGTTTTTGTCTGCAAGAAAA+AGG | + | chr3.1:81436696-81436715 | None:intergenic | 35.0% |
| ! | TGAGATTGTTGATGAGAAAC+AGG | + | chr3.1:81436117-81436136 | None:intergenic | 35.0% |
| ! | TGTTCTCTTTTTATAGGAGG+AGG | - | chr3.1:81438927-81438946 | MS.gene32891:intron | 35.0% |
| ! | TTTTCAGCCGTTAGATTACA+TGG | + | chr3.1:81439305-81439324 | None:intergenic | 35.0% |
| ! | TTTTGTCCTTGCACATTTCT+TGG | - | chr3.1:81439680-81439699 | MS.gene32891:CDS | 35.0% |
| !! | AAGACGTCTTTTTGAGAGAT+TGG | - | chr3.1:81437803-81437822 | MS.gene32891:intron | 35.0% |
| !! | AGACGTCTTTTTGAGAGATT+GGG | - | chr3.1:81437804-81437823 | MS.gene32891:intron | 35.0% |
| !! | AGATCCCATTTTTAACAACG+AGG | - | chr3.1:81436164-81436183 | MS.gene32891:intron | 35.0% |
| !! | AGCATTGGTCTAAATCACTT+AGG | - | chr3.1:81437184-81437203 | MS.gene32891:CDS | 35.0% |
| !! | CACCTTTTGTTTCTTACTGT+AGG | + | chr3.1:81438762-81438781 | None:intergenic | 35.0% |
| !! | CTACTAAAGTTTGTTGTGCA+AGG | - | chr3.1:81436451-81436470 | MS.gene32891:intron | 35.0% |
| !! | CTGAAGAAGCATTATGAGAA+TGG | + | chr3.1:81436844-81436863 | None:intergenic | 35.0% |
| !! | GAGGAAGAACAGTTATTTTC+TGG | - | chr3.1:81438946-81438965 | MS.gene32891:intron | 35.0% |
| !! | GTAAAGGACGAATTTTCAAG+AGG | - | chr3.1:81437484-81437503 | MS.gene32891:intron | 35.0% |
| !! | TATCAATCAAGGCACTGTAA+AGG | - | chr3.1:81437468-81437487 | MS.gene32891:intron | 35.0% |
| !! | TCATGTGGAGAGAGTATTAA+AGG | - | chr3.1:81438161-81438180 | MS.gene32891:intron | 35.0% |
| !! | TGGAGAGAGTATTAAAGGAT+AGG | - | chr3.1:81438166-81438185 | MS.gene32891:intron | 35.0% |
| !! | TGTTAGTGGTGTTGATCTTA+GGG | - | chr3.1:81438826-81438845 | MS.gene32891:intron | 35.0% |
| AAGATTACTTGCATCCTGTG+AGG | + | chr3.1:81436043-81436062 | None:intergenic | 40.0% | |
| AAGCCATTGTTCTGTTTGCA+AGG | - | chr3.1:81438446-81438465 | MS.gene32891:CDS | 40.0% | |
| AATAAAAACAAACCCCCTGC+TGG | + | chr3.1:81440995-81441014 | None:intergenic | 40.0% | |
| AATACTATGACTCACCTTGG+AGG | + | chr3.1:81438663-81438682 | None:intergenic | 40.0% | |
| AATCTTCACCATCATCAGGA+AGG | - | chr3.1:81440120-81440139 | MS.gene32891:CDS | 40.0% | |
| AATGATCCTAAGAGAATGCC+AGG | - | chr3.1:81437229-81437248 | MS.gene32891:CDS | 40.0% | |
| AATGATGTTACGGCTGTTAG+TGG | - | chr3.1:81438812-81438831 | MS.gene32891:intron | 40.0% | |
| ACAGCAATAGAACTGGATGT+TGG | + | chr3.1:81436965-81436984 | None:intergenic | 40.0% | |
| ACCAAAGTCTGAATGAGACT+AGG | - | chr3.1:81440439-81440458 | MS.gene32891:CDS | 40.0% | |
| ACTCCAGACAATTTGATCAC+AGG | + | chr3.1:81441246-81441265 | None:intergenic | 40.0% | |
| AGCCATTGTTCTGTTTGCAA+GGG | - | chr3.1:81438447-81438466 | MS.gene32891:CDS | 40.0% | |
| AGCCGGACAAAATGTTCTTT+AGG | + | chr3.1:81436545-81436564 | None:intergenic | 40.0% | |
| ATCCTCATGATTCACACATG+AGG | - | chr3.1:81437146-81437165 | MS.gene32891:CDS | 40.0% | |
| ATGTAATTGCAGTCTTGGAG+AGG | - | chr3.1:81441526-81441545 | MS.gene32891:CDS | 40.0% | |
| ATGTGTGAATCATGAGGATG+AGG | + | chr3.1:81437145-81437164 | None:intergenic | 40.0% | |
| ATTAAGGCCTTGCATGTGAA+CGG | + | chr3.1:81437011-81437030 | None:intergenic | 40.0% | |
| CAAATTCCACATCAGAGCAT+TGG | - | chr3.1:81437169-81437188 | MS.gene32891:CDS | 40.0% | |
| CCAAGTCAATCGTAGTAAAC+AGG | - | chr3.1:81436281-81436300 | MS.gene32891:intron | 40.0% | |
| CCACTAAAAAAACCTCCTCT+TGG | - | chr3.1:81438597-81438616 | MS.gene32891:CDS | 40.0% | |
| CCTGTTTACTACGATTGACT+TGG | + | chr3.1:81436284-81436303 | None:intergenic | 40.0% | |
| CGTAGTAAACAGGTACCATT+TGG | - | chr3.1:81436291-81436310 | MS.gene32891:intron | 40.0% | |
| CTCCAGACAATTTGATCACA+GGG | + | chr3.1:81441245-81441264 | None:intergenic | 40.0% | |
| CTCCGGAAACTAAATGATGT+GGG | - | chr3.1:81439600-81439619 | MS.gene32891:intron | 40.0% | |
| GAAGGATGTAATTGCAGTCT+TGG | - | chr3.1:81441521-81441540 | MS.gene32891:CDS | 40.0% | |
| GAGGATGAAACTATGCATTC+AGG | - | chr3.1:81435663-81435682 | MS.gene32891:CDS | 40.0% | |
| GATCTGGTTGAGATGCAAAA+TGG | + | chr3.1:81437576-81437595 | None:intergenic | 40.0% | |
| GATGAGAAACAGGTAAAGTC+TGG | + | chr3.1:81436107-81436126 | None:intergenic | 40.0% | |
| GCAAAATGGGAAGCAGTATT+TGG | + | chr3.1:81437562-81437581 | None:intergenic | 40.0% | |
| GCAGCTGTCTACAAATTCAA+TGG | - | chr3.1:81440233-81440252 | MS.gene32891:CDS | 40.0% | |
| GGAAGTTGGGGAATCAATAT+AGG | + | chr3.1:81436327-81436346 | None:intergenic | 40.0% | |
| GGGAAGTAGATGACAAAATG+AGG | - | chr3.1:81439946-81439965 | MS.gene32891:CDS | 40.0% | |
| GGGTCGTAATAAAGCAACAA+AGG | - | chr3.1:81439839-81439858 | MS.gene32891:CDS | 40.0% | |
| GTATTGTATCTGGAGACCAT+GGG | + | chr3.1:81441350-81441369 | None:intergenic | 40.0% | |
| TAACAGTTGGCATCCTTACA+GGG | + | chr3.1:81436745-81436764 | None:intergenic | 40.0% | |
| TACAGCTAATTACTTCCGAC+TGG | + | chr3.1:81440830-81440849 | None:intergenic | 40.0% | |
| TATTGTATCTGGAGACCATG+GGG | + | chr3.1:81441349-81441368 | None:intergenic | 40.0% | |
| TCAGTCAATCATTACCAACG+TGG | - | chr3.1:81435884-81435903 | MS.gene32891:intron | 40.0% | |
| TCAGTCTCTCACAAAACAGT+TGG | - | chr3.1:81438260-81438279 | MS.gene32891:CDS | 40.0% | |
| TCCTAGTCTCATTCAGACTT+TGG | + | chr3.1:81440443-81440462 | None:intergenic | 40.0% | |
| TCTTGTATCGAATGCATGAG+AGG | - | chr3.1:81441574-81441593 | MS.gene32891:CDS | 40.0% | |
| TGAGCCAACCTATTCAACTA+TGG | - | chr3.1:81436880-81436899 | MS.gene32891:intron | 40.0% | |
| TGTAATTGCAGTCTTGGAGA+GGG | - | chr3.1:81441527-81441546 | MS.gene32891:CDS | 40.0% | |
| TGTATTGTATCTGGAGACCA+TGG | + | chr3.1:81441351-81441370 | None:intergenic | 40.0% | |
| TGTGAGGCAACATTCTGTAT+CGG | + | chr3.1:81436027-81436046 | None:intergenic | 40.0% | |
| TTCCCTGTGATCAAATTGTC+TGG | - | chr3.1:81441240-81441259 | MS.gene32891:CDS | 40.0% | |
| TTCTTTAGCATCCACTAGCA+TGG | - | chr3.1:81437507-81437526 | MS.gene32891:intron | 40.0% | |
| TTTAGACCAATGCTCTGATG+TGG | + | chr3.1:81437178-81437197 | None:intergenic | 40.0% | |
| ! | AACTCAGGTGCGTTTCTTTT+TGG | - | chr3.1:81440194-81440213 | MS.gene32891:CDS | 40.0% |
| ! | ACAAAAGTGCAACAACAGGT+AGG | - | chr3.1:81436608-81436627 | MS.gene32891:intron | 40.0% |
| ! | AGTGATGATTTGGACATCTG+AGG | + | chr3.1:81441555-81441574 | None:intergenic | 40.0% |
| ! | CATTTTGTCCGGCTTATGAA+AGG | - | chr3.1:81436551-81436570 | MS.gene32891:intron | 40.0% |
| ! | GCTTTTATGCAAGGAAAGTG+TGG | + | chr3.1:81440409-81440428 | None:intergenic | 40.0% |
| ! | TCCGATAATTTTCCTACCAG+CGG | - | chr3.1:81439457-81439476 | MS.gene32891:intron | 40.0% |
| ! | TTTTCTCAATATCAACCCGC+TGG | + | chr3.1:81439476-81439495 | None:intergenic | 40.0% |
| ! | TTTTGCACCGCAGATTCAAA+CGG | - | chr3.1:81439722-81439741 | MS.gene32891:CDS | 40.0% |
| !! | CTGTTAGTGGTGTTGATCTT+AGG | - | chr3.1:81438825-81438844 | MS.gene32891:intron | 40.0% |
| !! | GAAACAAAAGGTGTCATCTC+TGG | - | chr3.1:81438769-81438788 | MS.gene32891:intron | 40.0% |
| !! | TACTGGTTGATTTTGGACGA+AGG | + | chr3.1:81440486-81440505 | None:intergenic | 40.0% |
| !! | TGCTTTACCGCTTTTATGCA+AGG | + | chr3.1:81440418-81440437 | None:intergenic | 40.0% |
| !! | TGGTTGATTTTGGATGAAGG+CGG | - | chr3.1:81440543-81440562 | MS.gene32891:intron | 40.0% |
| !!! | CCAAGAGGAGGTTTTTTTAG+TGG | + | chr3.1:81438600-81438619 | None:intergenic | 40.0% |
| !!! | GGTAACTACAGCCATTTTTC+CGG | - | chr3.1:81437082-81437101 | MS.gene32891:CDS | 40.0% |
| !!! | GTAACTACAGCCATTTTTCC+GGG | - | chr3.1:81437083-81437102 | MS.gene32891:CDS | 40.0% |
| !!! | TTGTGGTTTTAGCTCCGTTT+CGG | + | chr3.1:81435989-81436008 | None:intergenic | 40.0% |
| AAACAGGTAAAGTCTGGCGT+TGG | + | chr3.1:81436101-81436120 | None:intergenic | 45.0% | |
| AAAGCTTCTCGAAGACGATG+AGG | - | chr3.1:81435644-81435663 | MS.gene32891:CDS | 45.0% | |
| AACAGTTGGCATCCTTACAG+GGG | + | chr3.1:81436744-81436763 | None:intergenic | 45.0% | |
| AAGAGTTGTCCAAGAAGAGG+AGG | - | chr3.1:81439005-81439024 | MS.gene32891:intron | 45.0% | |
| ACTCGAACATCATGTTCCTG+AGG | + | chr3.1:81436923-81436942 | None:intergenic | 45.0% | |
| AGAAAAGGTCCAACTTCGCT+TGG | - | chr3.1:81440170-81440189 | MS.gene32891:CDS | 45.0% | |
| AGAGCAACCTTCTTCCGAAA+CGG | - | chr3.1:81435972-81435991 | MS.gene32891:intron | 45.0% | |
| AGGCTGAAACAGAAAAGCTC+CGG | - | chr3.1:81439583-81439602 | MS.gene32891:intron | 45.0% | |
| AGTAGTTTAGCACGGCATAG+AGG | + | chr3.1:81436436-81436455 | None:intergenic | 45.0% | |
| AGTCTGAATGAGACTAGGAG+AGG | - | chr3.1:81440444-81440463 | MS.gene32891:CDS | 45.0% | |
| ATAGGAAAGCAAGGGAAGAG+TGG | - | chr3.1:81439550-81439569 | MS.gene32891:intron | 45.0% | |
| ATAGGGAGCAACAAGCCAAA+TGG | + | chr3.1:81436309-81436328 | None:intergenic | 45.0% | |
| ATATCACACATGTGCCAGCA+GGG | - | chr3.1:81440978-81440997 | MS.gene32891:CDS | 45.0% | |
| ATGCAGTTGTGCCAATGCAT+GGG | + | chr3.1:81436795-81436814 | None:intergenic | 45.0% | |
| CAACAGCGGCTAGGAAATTT+GGG | - | chr3.1:81441448-81441467 | MS.gene32891:intron | 45.0% | |
| CAGATCTAAATAGGGCTGCT+AGG | - | chr3.1:81438108-81438127 | MS.gene32891:intron | 45.0% | |
| CATAGGTCCGTTTGAATCTG+CGG | + | chr3.1:81439732-81439751 | None:intergenic | 45.0% | |
| CATTTCCCATCGACATATGG+AGG | - | chr3.1:81437052-81437071 | MS.gene32891:CDS | 45.0% | |
| CCACAATCCCTTTCATAAGC+CGG | + | chr3.1:81436562-81436581 | None:intergenic | 45.0% | |
| CCAGACTGACTGTCAAAATC+AGG | - | chr3.1:81435927-81435946 | MS.gene32891:intron | 45.0% | |
| CCCGCTGGTAGGAAAATTAT+CGG | + | chr3.1:81439461-81439480 | None:intergenic | 45.0% | |
| CGCAAATCTTCACCATCATC+AGG | - | chr3.1:81440116-81440135 | MS.gene32891:CDS | 45.0% | |
| CGGCTTATGAAAGGGATTGT+GGG | - | chr3.1:81436560-81436579 | MS.gene32891:intron | 45.0% | |
| CTGTCCAGAAGAACCTGTAT+TGG | + | chr3.1:81436717-81436736 | None:intergenic | 45.0% | |
| CTGTTGGCAACAAGAACACA+GGG | + | chr3.1:81441434-81441453 | None:intergenic | 45.0% | |
| CTTACAGAGACAGTTGGATC+TGG | + | chr3.1:81437592-81437611 | None:intergenic | 45.0% | |
| GAAAAGGTCCAACTTCGCTT+GGG | - | chr3.1:81440171-81440190 | MS.gene32891:CDS | 45.0% | |
| GAAACGGAGCTAAAACCACA+AGG | - | chr3.1:81435988-81436007 | MS.gene32891:intron | 45.0% | |
| GAAACTCGACTGTCATCCTT+GGG | + | chr3.1:81438973-81438992 | None:intergenic | 45.0% | |
| GAAAGATGACGAGGAACTAG+TGG | + | chr3.1:81437113-81437132 | None:intergenic | 45.0% | |
| GAATCATGAGGATGAGGTTG+TGG | + | chr3.1:81437139-81437158 | None:intergenic | 45.0% | |
| GAGATGACATGCTGTCAAAG+TGG | - | chr3.1:81440009-81440028 | MS.gene32891:CDS | 45.0% | |
| GAGGACAAATGCTGCAAATG+TGG | - | chr3.1:81439965-81439984 | MS.gene32891:CDS | 45.0% | |
| GATACAGAATGTTGCCTCAC+AGG | - | chr3.1:81436026-81436045 | MS.gene32891:intron | 45.0% | |
| GATGAGTAATCAACAGGCCT+CGG | - | chr3.1:81436239-81436258 | MS.gene32891:intron | 45.0% | |
| GCAGCAGATGAGTAATCAAC+AGG | - | chr3.1:81436233-81436252 | MS.gene32891:intron | 45.0% | |
| GCTCCGGAAACTAAATGATG+TGG | - | chr3.1:81439599-81439618 | MS.gene32891:intron | 45.0% | |
| GCTGTCAAAGTGGCAATTGA+TGG | - | chr3.1:81440019-81440038 | MS.gene32891:CDS | 45.0% | |
| GCTTATGAAAGGGATTGTGG+GGG | - | chr3.1:81436562-81436581 | MS.gene32891:intron | 45.0% | |
| GGAAGAGTGGGAGAAAAAAC+AGG | - | chr3.1:81439563-81439582 | MS.gene32891:intron | 45.0% | |
| GGAGAGATTCGTCTTGTGAT+TGG | + | chr3.1:81436080-81436099 | None:intergenic | 45.0% | |
| GGCTTATGAAAGGGATTGTG+GGG | - | chr3.1:81436561-81436580 | MS.gene32891:intron | 45.0% | |
| GGGTTGCCTTCTGTTAATTC+TGG | - | chr3.1:81437424-81437443 | MS.gene32891:CDS | 45.0% | |
| GGTCAAAATGAACAGGGTAG+TGG | - | chr3.1:81437445-81437464 | MS.gene32891:intron | 45.0% | |
| GGTGACAAGGAGAAAGATGA+GGG | - | chr3.1:81439819-81439838 | MS.gene32891:CDS | 45.0% | |
| GTAACAGTTGGCATCCTTAC+AGG | + | chr3.1:81436746-81436765 | None:intergenic | 45.0% | |
| GTAGTTTAGCACGGCATAGA+GGG | + | chr3.1:81436435-81436454 | None:intergenic | 45.0% | |
| GTATAGGTAGAGGGTAGTTC+CGG | - | chr3.1:81439789-81439808 | MS.gene32891:CDS | 45.0% | |
| GTTCCACTGGAAGTAACAGT+TGG | + | chr3.1:81436758-81436777 | None:intergenic | 45.0% | |
| TACCTGCGTCAGAATCAGAA+AGG | + | chr3.1:81435755-81435774 | None:intergenic | 45.0% | |
| TAGGAAAGCAAGGGAAGAGT+GGG | - | chr3.1:81439551-81439570 | MS.gene32891:intron | 45.0% | |
| TAGGAAGTTGGGCTCACTAA+TGG | - | chr3.1:81440585-81440604 | MS.gene32891:intron | 45.0% | |
| TAGTGGTTGTCCCGGAAAAA+TGG | + | chr3.1:81437096-81437115 | None:intergenic | 45.0% | |
| TCAGACTTTCCTCCTCTTCT+TGG | + | chr3.1:81439017-81439036 | None:intergenic | 45.0% | |
| TCGAAGAGTTGTCCAAGAAG+AGG | - | chr3.1:81439002-81439021 | MS.gene32891:intron | 45.0% | |
| TCGATTCAAAGCAGCTTGGA+AGG | + | chr3.1:81435703-81435722 | None:intergenic | 45.0% | |
| TGAAACTCGACTGTCATCCT+TGG | + | chr3.1:81438974-81438993 | None:intergenic | 45.0% | |
| TGCCCTTGCAAACAGAACAA+TGG | + | chr3.1:81438452-81438471 | None:intergenic | 45.0% | |
| TGCCTCATGTGTGAATCATG+AGG | + | chr3.1:81437151-81437170 | None:intergenic | 45.0% | |
| TGGTGACAAGGAGAAAGATG+AGG | - | chr3.1:81439818-81439837 | MS.gene32891:CDS | 45.0% | |
| TGTCTCGATTCAAAGCAGCT+TGG | + | chr3.1:81435707-81435726 | None:intergenic | 45.0% | |
| TGTGGAAAGATGCTTGTCAC+TGG | - | chr3.1:81439237-81439256 | MS.gene32891:intron | 45.0% | |
| TGTGTTCTTGTTGCCAACAG+CGG | - | chr3.1:81441434-81441453 | MS.gene32891:intron | 45.0% | |
| TGTTGTATGTGCCATGCTAG+TGG | + | chr3.1:81437521-81437540 | None:intergenic | 45.0% | |
| TTGTGGTCTGAAAGATGACG+AGG | + | chr3.1:81437122-81437141 | None:intergenic | 45.0% | |
| TTTGTGCTCCTTCCTGATGA+TGG | + | chr3.1:81440131-81440150 | None:intergenic | 45.0% | |
| ! | AAGAAACCACTTGAGGCACT+TGG | - | chr3.1:81438624-81438643 | MS.gene32891:CDS | 45.0% |
| ! | ATGCCAACTGTTACTTCCAG+TGG | - | chr3.1:81436752-81436771 | MS.gene32891:intron | 45.0% |
| ! | ATTGATTCCCCAACTTCCCA+AGG | - | chr3.1:81436329-81436348 | MS.gene32891:intron | 45.0% |
| ! | CAGAAGCACAGAAATCCAGT+CGG | - | chr3.1:81440812-81440831 | MS.gene32891:intron | 45.0% |
| ! | CAGGGTAGTGGTATCAATCA+AGG | - | chr3.1:81437457-81437476 | MS.gene32891:intron | 45.0% |
| ! | CCGATAATTTTCCTACCAGC+GGG | - | chr3.1:81439458-81439477 | MS.gene32891:intron | 45.0% |
| ! | GAAAGGCATGGGTAATGATG+TGG | - | chr3.1:81439219-81439238 | MS.gene32891:intron | 45.0% |
| ! | GCTGCTGTTGCTGCTTATTA+AGG | + | chr3.1:81437027-81437046 | None:intergenic | 45.0% |
| ! | GCTGCTTTGAATCGAGACAT+TGG | - | chr3.1:81435708-81435727 | MS.gene32891:CDS | 45.0% |
| ! | GCTTTGAATCGAGACATTGG+CGG | - | chr3.1:81435711-81435730 | MS.gene32891:CDS | 45.0% |
| ! | GGTTCCATTTTGTCCCTTTG+TGG | - | chr3.1:81439621-81439640 | MS.gene32891:intron | 45.0% |
| ! | TTTAGCTCCGTTTCGGAAGA+AGG | + | chr3.1:81435982-81436001 | None:intergenic | 45.0% |
| !! | ACAGTTATTTTCTGGGCCCA+AGG | - | chr3.1:81438954-81438973 | MS.gene32891:intron | 45.0% |
| !! | ATGACACCAGAAGTGCTAGT+TGG | + | chr3.1:81438567-81438586 | None:intergenic | 45.0% |
| !! | CCTGATTTTGACAGTCAGTC+TGG | + | chr3.1:81435930-81435949 | None:intergenic | 45.0% |
| !! | CGCTGGTTGATTTTGGATGA+AGG | - | chr3.1:81440540-81440559 | MS.gene32891:intron | 45.0% |
| !! | GGTTGATTTTGGACGAAGGT+GGG | + | chr3.1:81440482-81440501 | None:intergenic | 45.0% |
| !! | GGTTGATTTTGGATGAAGGC+GGG | - | chr3.1:81440544-81440563 | MS.gene32891:intron | 45.0% |
| !! | TGACACCAGAAGTGCTAGTT+GGG | + | chr3.1:81438566-81438585 | None:intergenic | 45.0% |
| !! | TGGTTGATTTTGGACGAAGG+TGG | + | chr3.1:81440483-81440502 | None:intergenic | 45.0% |
| !!! | TAAGTTGTTTTGGAGCTCGC+TGG | - | chr3.1:81440523-81440542 | MS.gene32891:CDS | 45.0% |
| AAAACCACAAGGACCTGTCG+TGG | - | chr3.1:81435999-81436018 | MS.gene32891:intron | 50.0% | |
| AAGTTGCATTGCCCTGTCCT+TGG | + | chr3.1:81436349-81436368 | None:intergenic | 50.0% | |
| ACAGTTGGCATCCTTACAGG+GGG | + | chr3.1:81436743-81436762 | None:intergenic | 50.0% | |
| ACTATGACTCACCTTGGAGG+AGG | + | chr3.1:81438660-81438679 | None:intergenic | 50.0% | |
| ACTCGGTTGTTCATTGACCG+AGG | + | chr3.1:81436259-81436278 | None:intergenic | 50.0% | |
| AGAAGCCAGGAGTAGGAAGT+TGG | - | chr3.1:81440573-81440592 | MS.gene32891:intron | 50.0% | |
| AGCACGGCATAGAGGGAAAA+AGG | + | chr3.1:81436428-81436447 | None:intergenic | 50.0% | |
| AGTGGTTTCTTCTGGCCAAG+AGG | + | chr3.1:81438615-81438634 | None:intergenic | 50.0% | |
| AGTTGCATTGCCCTGTCCTT+GGG | + | chr3.1:81436348-81436367 | None:intergenic | 50.0% | |
| CACCTTTCTGATTCTGACGC+AGG | - | chr3.1:81435750-81435769 | MS.gene32891:CDS | 50.0% | |
| CACTGCCTCCATATGTCGAT+GGG | + | chr3.1:81437060-81437079 | None:intergenic | 50.0% | |
| CAGATCCCAACTAGCACTTC+TGG | - | chr3.1:81438558-81438577 | MS.gene32891:intron | 50.0% | |
| CATATCACACATGTGCCAGC+AGG | - | chr3.1:81440977-81440996 | MS.gene32891:CDS | 50.0% | |
| CATGCCTTTCAAGCCACACT+CGG | + | chr3.1:81439209-81439228 | None:intergenic | 50.0% | |
| CCAAATTTCCTAGCCGCTGT+TGG | + | chr3.1:81441450-81441469 | None:intergenic | 50.0% | |
| CCAACAGCGGCTAGGAAATT+TGG | - | chr3.1:81441447-81441466 | MS.gene32891:intron | 50.0% | |
| CCGGCTTATGAAAGGGATTG+TGG | - | chr3.1:81436559-81436578 | MS.gene32891:intron | 50.0% | |
| CTCAATATCAACCCGCTGGT+AGG | + | chr3.1:81439472-81439491 | None:intergenic | 50.0% | |
| CTCCTTGTCACCATCAACTC+CGG | + | chr3.1:81439811-81439830 | None:intergenic | 50.0% | |
| GAAGAACCAAGTGCCTCAAG+TGG | + | chr3.1:81438633-81438652 | None:intergenic | 50.0% | |
| GAAGCCAGGAGTAGGAAGTT+GGG | - | chr3.1:81440574-81440593 | MS.gene32891:intron | 50.0% | |
| GATCCACCTGGCATTCTCTT+AGG | + | chr3.1:81437238-81437257 | None:intergenic | 50.0% | |
| GATCCTAAGAGAATGCCAGG+TGG | - | chr3.1:81437232-81437251 | MS.gene32891:CDS | 50.0% | |
| GATGCAGTTGTGCCAATGCA+TGG | + | chr3.1:81436796-81436815 | None:intergenic | 50.0% | |
| GCATGCCCAAGAAATGTGCA+AGG | + | chr3.1:81439689-81439708 | None:intergenic | 50.0% | |
| GCTGTTGGCAACAAGAACAC+AGG | + | chr3.1:81441435-81441454 | None:intergenic | 50.0% | |
| GTGCCTCAAGTGGTTTCTTC+TGG | + | chr3.1:81438623-81438642 | None:intergenic | 50.0% | |
| TATCACACATGTGCCAGCAG+GGG | - | chr3.1:81440979-81440998 | MS.gene32891:CDS | 50.0% | |
| TCGGTCAATGAACAACCGAG+TGG | - | chr3.1:81436258-81436277 | MS.gene32891:intron | 50.0% | |
| TGATCACAGGGAACACACGA+GGG | + | chr3.1:81441233-81441252 | None:intergenic | 50.0% | |
| TGCAGTTGTGCCAATGCATG+GGG | + | chr3.1:81436794-81436813 | None:intergenic | 50.0% | |
| TGCTCGTAGCATCTCTGTGA+AGG | - | chr3.1:81441503-81441522 | MS.gene32891:CDS | 50.0% | |
| TGGCCAGAAGAAACCACTTG+AGG | - | chr3.1:81438617-81438636 | MS.gene32891:CDS | 50.0% | |
| TGGTTGTCGTGACTCGAAGT+CGG | + | chr3.1:81435910-81435929 | None:intergenic | 50.0% | |
| TGTAGACAGCTGCAAGTAGC+AGG | + | chr3.1:81440226-81440245 | None:intergenic | 50.0% | |
| TGTGTGGAGGAAAGAATGCG+TGG | - | chr3.1:81439336-81439355 | MS.gene32891:intron | 50.0% | |
| TTGATCACAGGGAACACACG+AGG | + | chr3.1:81441234-81441253 | None:intergenic | 50.0% | |
| TTGTGGGGGATCAGATGCTT+AGG | - | chr3.1:81436576-81436595 | MS.gene32891:intron | 50.0% | |
| ! | AATTGATGGCTGAGCAAGCC+AGG | - | chr3.1:81440033-81440052 | MS.gene32891:CDS | 50.0% |
| ! | AGGTTGGCTCACTCTTCACT+TGG | + | chr3.1:81436871-81436890 | None:intergenic | 50.0% |
| ! | GAGTGTGGCTTGAAAGGCAT+GGG | - | chr3.1:81439208-81439227 | MS.gene32891:intron | 50.0% |
| !! | CTACGATTGACTTGGCCACT+CGG | + | chr3.1:81436276-81436295 | None:intergenic | 50.0% |
| !! | TGGAGCTCGCTGGTTGATTT+TGG | - | chr3.1:81440533-81440552 | MS.gene32891:intron | 50.0% |
| !! | TTCCGGAGTTGATGGTGACA+AGG | - | chr3.1:81439806-81439825 | MS.gene32891:CDS | 50.0% |
| !! | TTCTGTATCGGTTCCACGAC+AGG | + | chr3.1:81436015-81436034 | None:intergenic | 50.0% |
| AAGGCCTTGCATGTGAACGG+CGG | + | chr3.1:81437008-81437027 | None:intergenic | 55.0% | |
| ACAGTCGACACAGATCCACC+TGG | + | chr3.1:81437250-81437269 | None:intergenic | 55.0% | |
| AGATCCGCCGTTCACATGCA+AGG | - | chr3.1:81437001-81437020 | MS.gene32891:intron | 55.0% | |
| ATCACACATGTGCCAGCAGG+GGG | - | chr3.1:81440980-81440999 | MS.gene32891:CDS | 55.0% | |
| ATGACTCACCTTGGAGGAGG+AGG | + | chr3.1:81438657-81438676 | None:intergenic | 55.0% | |
| ATGTTGGCAGTGACCGAGTG+TGG | - | chr3.1:81439193-81439212 | MS.gene32891:intron | 55.0% | |
| CCAACTTCGCTTGGGAACTC+AGG | - | chr3.1:81440179-81440198 | MS.gene32891:CDS | 55.0% | |
| CCACTGCCTCCATATGTCGA+TGG | + | chr3.1:81437061-81437080 | None:intergenic | 55.0% | |
| CCATCGACATATGGAGGCAG+TGG | - | chr3.1:81437058-81437077 | MS.gene32891:CDS | 55.0% | |
| CCTGAGTTCCCAAGCGAAGT+TGG | + | chr3.1:81440182-81440201 | None:intergenic | 55.0% | |
| CGAGGAACTAGTGGTTGTCC+CGG | + | chr3.1:81437104-81437123 | None:intergenic | 55.0% | |
| CGAGTGTGGCTTGAAAGGCA+TGG | - | chr3.1:81439207-81439226 | MS.gene32891:intron | 55.0% | |
| CGGCATTCTCTCCCTTCATG+TGG | - | chr3.1:81438146-81438165 | MS.gene32891:intron | 55.0% | |
| GAGGGTAGTTCCGGAGTTGA+TGG | - | chr3.1:81439798-81439817 | MS.gene32891:CDS | 55.0% | |
| GCAGTAGAGAAGCCAGGAGT+AGG | - | chr3.1:81440566-81440585 | MS.gene32891:intron | 55.0% | |
| GGTTTCTTCTGGCCAAGAGG+AGG | + | chr3.1:81438612-81438631 | None:intergenic | 55.0% | |
| GTGACCGAGTGTGGCTTGAA+AGG | - | chr3.1:81439202-81439221 | MS.gene32891:intron | 55.0% | |
| TCCCCAACTTCCCAAGGACA+GGG | - | chr3.1:81436335-81436354 | MS.gene32891:intron | 55.0% | |
| TCGACATATGGAGGCAGTGG+TGG | - | chr3.1:81437061-81437080 | MS.gene32891:CDS | 55.0% | |
| TCTTGTTGCCAACAGCGGCT+AGG | - | chr3.1:81441439-81441458 | MS.gene32891:intron | 55.0% | |
| TGACTCACCTTGGAGGAGGA+GGG | + | chr3.1:81438656-81438675 | None:intergenic | 55.0% | |
| TGAGCCCAACTTCCTACTCC+TGG | + | chr3.1:81440581-81440600 | None:intergenic | 55.0% | |
| TGCCCTGTCCTTGGGAAGTT+GGG | + | chr3.1:81436340-81436359 | None:intergenic | 55.0% | |
| TTCCCCAACTTCCCAAGGAC+AGG | - | chr3.1:81436334-81436353 | MS.gene32891:intron | 55.0% | |
| TTGCCCTGTCCTTGGGAAGT+TGG | + | chr3.1:81436341-81436360 | None:intergenic | 55.0% | |
| ! | AAGCCAGGCAGAAGCGTGAA+GGG | - | chr3.1:81440048-81440067 | MS.gene32891:CDS | 55.0% |
| !! | AGGTGGATCTGTGTCGACTG+TGG | - | chr3.1:81437249-81437268 | MS.gene32891:CDS | 55.0% |
| ATCTCCCCCAACAGCAGCTC+GGG | + | chr3.1:81439994-81440013 | None:intergenic | 60.0% | |
| CATCTCCCCCAACAGCAGCT+CGG | + | chr3.1:81439995-81440014 | None:intergenic | 60.0% | |
| GACTCACCTTGGAGGAGGAG+GGG | + | chr3.1:81438655-81438674 | None:intergenic | 60.0% | |
| GCCCTGTCCTTGGGAAGTTG+GGG | + | chr3.1:81436339-81436358 | None:intergenic | 60.0% | |
| GGTTCCACGACAGGTCCTTG+TGG | + | chr3.1:81436006-81436025 | None:intergenic | 60.0% | |
| GTTCTTCCCCTCCTCCTCCA+AGG | - | chr3.1:81438646-81438665 | MS.gene32891:CDS | 60.0% | |
| TGACTCGAAGTCGGCCACGT+TGG | + | chr3.1:81435901-81435920 | None:intergenic | 60.0% | |
| ! | AGCCAGGCAGAAGCGTGAAG+GGG | - | chr3.1:81440049-81440068 | MS.gene32891:CDS | 60.0% |
| ! | CAAGCCAGGCAGAAGCGTGA+AGG | - | chr3.1:81440047-81440066 | MS.gene32891:CDS | 60.0% |
| AGGCGGGCAGTAGAGAAGCC+AGG | - | chr3.1:81440560-81440579 | MS.gene32891:intron | 65.0% | |
| CTGGACAGCAGCCCCCTGTA+AGG | - | chr3.1:81436729-81436748 | MS.gene32891:intron | 65.0% | |
| TGGCAGCCCGAGCTGCTGTT+GGG | - | chr3.1:81439985-81440004 | MS.gene32891:CDS | 65.0% | |
| ! | CCAGGCAGAAGCGTGAAGGG+GGG | - | chr3.1:81440051-81440070 | MS.gene32891:CDS | 65.0% |
| ! | GCAGAAGCGTGAAGGGGGGA+CGG | - | chr3.1:81440055-81440074 | MS.gene32891:CDS | 65.0% |
| ! | GCCAGGCAGAAGCGTGAAGG+GGG | - | chr3.1:81440050-81440069 | MS.gene32891:CDS | 65.0% |
| CCCCCCTTCACGCTTCTGCC+TGG | + | chr3.1:81440054-81440073 | None:intergenic | 70.0% | |
| GCAGCCCGAGCTGCTGTTGG+GGG | - | chr3.1:81439987-81440006 | MS.gene32891:CDS | 70.0% | |
| GGCAGCCCGAGCTGCTGTTG+GGG | - | chr3.1:81439986-81440005 | MS.gene32891:CDS | 70.0% | |
| GGGGGGACGGACACTGCATC+TGG | - | chr3.1:81440068-81440087 | MS.gene32891:CDS | 70.0% | |
| GTGGCAGCCCGAGCTGCTGT+TGG | - | chr3.1:81439984-81440003 | MS.gene32891:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 81435627 | 81441623 | 81435627 | ID=MS.gene32891 |
| chr3.1 | mRNA | 81435627 | 81441623 | 81435627 | ID=MS.gene32891.t1;Parent=MS.gene32891 |
| chr3.1 | exon | 81441479 | 81441623 | 81441479 | ID=MS.gene32891.t1.exon1;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81441479 | 81441623 | 81441479 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81440858 | 81441381 | 81440858 | ID=MS.gene32891.t1.exon2;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81440858 | 81441381 | 81440858 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81440625 | 81440720 | 81440625 | ID=MS.gene32891.t1.exon3;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81440625 | 81440720 | 81440625 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81439644 | 81440543 | 81439644 | ID=MS.gene32891.t1.exon4;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81439644 | 81440543 | 81439644 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81438583 | 81438701 | 81438583 | ID=MS.gene32891.t1.exon5;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81438583 | 81438701 | 81438583 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81438403 | 81438484 | 81438403 | ID=MS.gene32891.t1.exon6;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81438403 | 81438484 | 81438403 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81438172 | 81438307 | 81438172 | ID=MS.gene32891.t1.exon7;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81438172 | 81438307 | 81438172 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81437992 | 81438047 | 81437992 | ID=MS.gene32891.t1.exon8;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81437992 | 81438047 | 81437992 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81437858 | 81437914 | 81437858 | ID=MS.gene32891.t1.exon9;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81437858 | 81437914 | 81437858 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81437633 | 81437773 | 81437633 | ID=MS.gene32891.t1.exon10;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81437633 | 81437773 | 81437633 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81437390 | 81437455 | 81437390 | ID=MS.gene32891.t1.exon11;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81437390 | 81437455 | 81437390 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81437050 | 81437311 | 81437050 | ID=MS.gene32891.t1.exon12;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81437050 | 81437311 | 81437050 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| chr3.1 | exon | 81435627 | 81435796 | 81435627 | ID=MS.gene32891.t1.exon13;Parent=MS.gene32891.t1 |
| chr3.1 | CDS | 81435627 | 81435796 | 81435627 | ID=cds.MS.gene32891.t1;Parent=MS.gene32891.t1 |
| Gene Sequence |
| Protein sequence |
