Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33010.t1 | XP_003588988.1 | 100 | 353 | 0 | 0 | 4 | 356 | 3 | 355 | 4.80E-203 | 716.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33010.t1 | Q8H1Q2 | 78.8 | 344 | 72 | 1 | 4 | 346 | 3 | 346 | 6.7e-161 | 568.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33010.t1 | G7I9X8 | 100.0 | 353 | 0 | 0 | 4 | 356 | 3 | 355 | 3.5e-203 | 716.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33010 | MS.gene49327 | PPI |
| MS.gene33010 | MS.gene39890 | PPI |
| MS.gene33010 | MS.gene036137 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33010.t1 | MTR_1g016110 | 100.000 | 353 | 0 | 0 | 4 | 356 | 3 | 355 | 0.0 | 721 |
| MS.gene33010.t1 | MTR_1g019620 | 99.433 | 353 | 2 | 0 | 4 | 356 | 3 | 355 | 0.0 | 716 |
| MS.gene33010.t1 | MTR_1g016110 | 100.000 | 308 | 0 | 0 | 49 | 356 | 1 | 308 | 0.0 | 625 |
| MS.gene33010.t1 | MTR_1g070360 | 34.564 | 298 | 143 | 10 | 55 | 344 | 17 | 270 | 2.12e-41 | 146 |
| MS.gene33010.t1 | MTR_6g086600 | 40.000 | 180 | 103 | 3 | 56 | 235 | 173 | 347 | 7.48e-31 | 122 |
| MS.gene33010.t1 | MTR_6g086600 | 40.000 | 180 | 103 | 3 | 56 | 235 | 164 | 338 | 9.06e-31 | 122 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33010.t1 | AT5G50960 | 78.286 | 350 | 73 | 2 | 4 | 352 | 3 | 350 | 0.0 | 570 |
| MS.gene33010.t1 | AT4G19540 | 43.784 | 185 | 94 | 5 | 55 | 236 | 38 | 215 | 1.27e-37 | 137 |
| MS.gene33010.t1 | AT3G24430 | 39.444 | 180 | 104 | 3 | 56 | 235 | 172 | 346 | 7.59e-31 | 123 |
Find 96 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCGATTAAATTCAGCATTTC+AGG | 0.187756 | 1.1:+6031214 | None:intergenic |
| GTTGCACAAATTTGCTGATT+TGG | 0.210496 | 1.1:+6035085 | None:intergenic |
| CCTTCTAGGCCAAGCATCTT+TGG | 0.224706 | 1.1:+6031715 | None:intergenic |
| GGTGTATCTCTTGACCTTCT+AGG | 0.281189 | 1.1:+6031701 | None:intergenic |
| TTGCACAAATTTGCTGATTT+GGG | 0.313038 | 1.1:+6035086 | None:intergenic |
| ATCCAGACGAAGCTGTTATA+TGG | 0.325193 | 1.1:-6031603 | MS.gene33010:CDS |
| CAACCAGGGTCAGGTCCTTT+AGG | 0.327543 | 1.1:+6035058 | None:intergenic |
| TTTATGAAGATTACAGATAA+TGG | 0.328286 | 1.1:-6031289 | MS.gene33010:CDS |
| GAGATGGCGGTACCCTTTCT+TGG | 0.328779 | 1.1:-6031139 | MS.gene33010:CDS |
| AATCTCGGGGTCATGTCAAT+TGG | 0.348522 | 1.1:-6031640 | MS.gene33010:CDS |
| CTTCTAGGCCAAGCATCTTT+GGG | 0.359162 | 1.1:+6031716 | None:intergenic |
| CATACGTTCGTTGGCATCCT+CGG | 0.362541 | 1.1:+6035265 | None:intergenic |
| AAAGTTGGAGTGAAAGTTCT+TGG | 0.364693 | 1.1:-6031361 | MS.gene33010:CDS |
| TTTCACAGTGGCCATTCTTT+CGG | 0.375809 | 1.1:+6031870 | None:intergenic |
| CTAATTGTTGATGCTCCGCC+TGG | 0.377996 | 1.1:-6031511 | MS.gene33010:CDS |
| CAGCTAACGCAAATGCCAGC+TGG | 0.379548 | 1.1:+6031791 | None:intergenic |
| CCAAAGATGCTTGGCCTAGA+AGG | 0.402010 | 1.1:-6031715 | MS.gene33010:CDS |
| CCAAGCATCTTTGGGATGCT+TGG | 0.406720 | 1.1:+6031724 | None:intergenic |
| GTCTATGTTGAGTCTAATCT+CGG | 0.416769 | 1.1:-6031655 | MS.gene33010:CDS |
| CACTGTGAAACATAAGATAC+TGG | 0.420840 | 1.1:-6031857 | MS.gene33010:CDS |
| AAGTTGGAGTGAAAGTTCTT+GGG | 0.429446 | 1.1:-6031360 | MS.gene33010:CDS |
| GGCGGTACCCTTTCTTGGTA+AGG | 0.430728 | 1.1:-6031134 | MS.gene33010:CDS |
| CATAAGATACTGGTCTTGTC+AGG | 0.432544 | 1.1:-6031847 | MS.gene33010:CDS |
| TAAAGGAACCTTACCAAGAA+AGG | 0.434925 | 1.1:+6031126 | None:intergenic |
| AGATGTTACGGAGTGGATAT+CGG | 0.437420 | 1.1:-6031257 | MS.gene33010:CDS |
| ACTTGAGATTTGAGATGGGC+TGG | 0.443213 | 1.1:+6031311 | None:intergenic |
| AGCTAACGCAAATGCCAGCT+GGG | 0.447107 | 1.1:+6031792 | None:intergenic |
| GCAGAATCAGACTGAGGACC+TGG | 0.452269 | 1.1:+6035136 | None:intergenic |
| CTCCATATAACAGCTTCGTC+TGG | 0.454307 | 1.1:+6031601 | None:intergenic |
| CATAAACTTGAGATTTGAGA+TGG | 0.455458 | 1.1:+6031306 | None:intergenic |
| ATACGTTCGTTGGCATCCTC+GGG | 0.457202 | 1.1:+6035266 | None:intergenic |
| CGTCTACATTAGCAGCATCT+AGG | 0.458881 | 1.1:+6031455 | None:intergenic |
| CTTCTGGACATTGATATTTG+TGG | 0.463857 | 1.1:-6031748 | MS.gene33010:CDS |
| ATCTCGGGGTCATGTCAATT+GGG | 0.470649 | 1.1:-6031639 | MS.gene33010:CDS |
| CTTTGCAAGGCAGCCGAAGA+AGG | 0.473054 | 1.1:-6031094 | MS.gene33010:CDS |
| TGGTGAGATGAAAGATGTTA+CGG | 0.483466 | 1.1:-6031269 | MS.gene33010:CDS |
| GGTCCTCAGTCTGATTCTGC+TGG | 0.484126 | 1.1:-6035133 | MS.gene33010:CDS |
| ATGTGTTCATCTGAGGTTCC+AGG | 0.485714 | 1.1:+6031493 | None:intergenic |
| GGCATTTGCGTTAGCTGCAA+GGG | 0.486589 | 1.1:-6031785 | MS.gene33010:CDS |
| GAGACCAACCAAGGTTGCTC+TGG | 0.487893 | 1.1:+6031680 | None:intergenic |
| ACAATCTTTATCTGCAAAGC+AGG | 0.488362 | 1.1:+6031066 | None:intergenic |
| GAAGAGTACCAACCAGGGTC+AGG | 0.493632 | 1.1:+6035049 | None:intergenic |
| AAAGCAGGATCTGCCTTCTT+CGG | 0.495633 | 1.1:+6031081 | None:intergenic |
| GATTTGAGATGGGCTGGGAC+AGG | 0.504393 | 1.1:+6031317 | None:intergenic |
| TTGCAAAGCTGTGGATCTAA+AGG | 0.505094 | 1.1:+6031109 | None:intergenic |
| AAATATATTCATACGTTCGT+TGG | 0.505708 | 1.1:+6035256 | None:intergenic |
| GGTTGCCATTGCCGAAAGAA+TGG | 0.507040 | 1.1:-6031881 | MS.gene33010:CDS |
| TATATCTCCGTTGTTCTCCA+TGG | 0.511044 | 1.1:+6035289 | None:intergenic |
| ATACTGGTCTTGTCAGGAAA+GGG | 0.511385 | 1.1:-6031841 | MS.gene33010:CDS |
| CTTGAGATTTGAGATGGGCT+GGG | 0.511450 | 1.1:+6031312 | None:intergenic |
| GTATTTGATAGTAGCGGTGG+TGG | 0.514266 | 1.1:-6031181 | MS.gene33010:CDS |
| ATTTGTGCAACTGCTCCTAA+AGG | 0.524029 | 1.1:-6035073 | MS.gene33010:CDS |
| AAAGGAACCTTACCAAGAAA+GGG | 0.525559 | 1.1:+6031127 | None:intergenic |
| TGGCATTTGCGTTAGCTGCA+AGG | 0.531152 | 1.1:-6031786 | MS.gene33010:CDS |
| CCAAGCATCCCAAAGATGCT+TGG | 0.531277 | 1.1:-6031724 | MS.gene33010:CDS |
| TCTATGTTGAGTCTAATCTC+GGG | 0.532182 | 1.1:-6031654 | MS.gene33010:CDS |
| GATAAGCTGATGGAAACTAG+TGG | 0.534659 | 1.1:-6031010 | MS.gene33010:CDS |
| GAGATACACCAGAGCAACCT+TGG | 0.541471 | 1.1:-6031688 | MS.gene33010:CDS |
| CTGGCATTTACAGATTGCCC+AGG | 0.541633 | 1.1:-6035154 | MS.gene33010:intron |
| GATACTGGTCTTGTCAGGAA+AGG | 0.542244 | 1.1:-6031842 | MS.gene33010:CDS |
| AGTGGCCATTCTTTCGGCAA+TGG | 0.546079 | 1.1:+6031876 | None:intergenic |
| TTGTCAGGAAAGGGAGGTGT+TGG | 0.547516 | 1.1:-6031832 | MS.gene33010:CDS |
| TCGGCTGCCTTGCAAAGCTG+TGG | 0.547932 | 1.1:+6031100 | None:intergenic |
| TACACCAGAGCAACCTTGGT+TGG | 0.551299 | 1.1:-6031684 | MS.gene33010:CDS |
| AGTTGGAGTGAAAGTTCTTG+GGG | 0.553652 | 1.1:-6031359 | MS.gene33010:CDS |
| ATAACAGCTTCGTCTGGATG+AGG | 0.554608 | 1.1:+6031607 | None:intergenic |
| AGATTAGACTCAACATAGAC+AGG | 0.558926 | 1.1:+6031658 | None:intergenic |
| AATTGAAATGTGTTCATCTG+AGG | 0.559191 | 1.1:+6031486 | None:intergenic |
| ATAAACTTGAGATTTGAGAT+GGG | 0.559421 | 1.1:+6031307 | None:intergenic |
| AAAGATAATAGATAAGCTGA+TGG | 0.562227 | 1.1:-6031020 | MS.gene33010:CDS |
| AACTAGTGGGCTGTCAATGA+CGG | 0.568788 | 1.1:-6030996 | MS.gene33010:CDS |
| ACTATCAAATACTTCACTGC+AGG | 0.571986 | 1.1:+6031192 | None:intergenic |
| CTGTCAATGACGGAAAGCAA+TGG | 0.575375 | 1.1:-6030986 | MS.gene33010:CDS |
| GACGAAGCTGTTATATGGAG+AGG | 0.584494 | 1.1:-6031598 | MS.gene33010:CDS |
| ATAAGCTGATGGAAACTAGT+GGG | 0.602164 | 1.1:-6031009 | MS.gene33010:CDS |
| TTTAGATCCACAGCTTTGCA+AGG | 0.603851 | 1.1:-6031107 | MS.gene33010:CDS |
| GTTGAAGATGTGTAACGAGA+TGG | 0.614173 | 1.1:-6031155 | MS.gene33010:CDS |
| CAGAATCAGACTGAGGACCT+GGG | 0.614924 | 1.1:+6035137 | None:intergenic |
| AAGAGAGACTTGTTGAGGAG+TGG | 0.628280 | 1.1:+6031417 | None:intergenic |
| AGATGAAAGATGTTACGGAG+TGG | 0.628653 | 1.1:-6031264 | MS.gene33010:CDS |
| CTAGATGCTGCTAATGTAGA+CGG | 0.629983 | 1.1:-6031454 | MS.gene33010:CDS |
| CTGGTCTTGTCAGGAAAGGG+AGG | 0.640582 | 1.1:-6031838 | MS.gene33010:CDS |
| GCTCCTAAAGGACCTGACCC+TGG | 0.642892 | 1.1:-6035061 | MS.gene33010:intron |
| GAAGTATTTGATAGTAGCGG+TGG | 0.649921 | 1.1:-6031184 | MS.gene33010:CDS |
| TCAATAAGAGAGACTTGTTG+AGG | 0.650660 | 1.1:+6031412 | None:intergenic |
| CTATGTTGAGTCTAATCTCG+GGG | 0.653466 | 1.1:-6031653 | MS.gene33010:CDS |
| AGTGAAGTATTTGATAGTAG+CGG | 0.680092 | 1.1:-6031187 | MS.gene33010:CDS |
| AGAGCTTCCATGGAGAACAA+CGG | 0.682274 | 1.1:-6035296 | None:intergenic |
| GGAAAATCTGATGCATGTGA+AGG | 0.682695 | 1.1:-6035112 | MS.gene33010:CDS |
| GGGGTTGTAGAGAATATGAG+TGG | 0.686460 | 1.1:-6031340 | MS.gene33010:CDS |
| TTTCCAGCAGAATCAGACTG+AGG | 0.699719 | 1.1:+6035130 | None:intergenic |
| CATAGACAGGAGACCAACCA+AGG | 0.702138 | 1.1:+6031671 | None:intergenic |
| GAAGATGTGTAACGAGATGG+CGG | 0.710160 | 1.1:-6031152 | MS.gene33010:CDS |
| GAACAACGGAGATATACCCG+AGG | 0.745436 | 1.1:-6035282 | MS.gene33010:CDS |
| CAGTATCTTATGTTTCACAG+TGG | 0.751734 | 1.1:+6031858 | None:intergenic |
| TGTTCATCTGAGGTTCCAGG+CGG | 0.754863 | 1.1:+6031496 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTTCTTAACATAAAT+TGG | - | chr1.1:6034189-6034208 | MS.gene33010:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:6033201-6033220 | MS.gene33010:intron | 100.0% |
| !! | ATCCTTTAAATAGATAAAAA+TGG | + | chr1.1:6033562-6033581 | None:intergenic | 15.0% |
| !! | TTAGAAATATTTCGATAATT+TGG | - | chr1.1:6033630-6033649 | MS.gene33010:intron | 15.0% |
| !!! | AACCATTTTTATCTATTTAA+AGG | - | chr1.1:6033557-6033576 | MS.gene33010:intron | 15.0% |
| !!! | ATTTTCATTTTTTTTTGCAT+TGG | - | chr1.1:6034349-6034368 | MS.gene33010:intron | 15.0% |
| !!! | TTTTTATCTATTTAAAGGAT+TGG | - | chr1.1:6033562-6033581 | MS.gene33010:intron | 15.0% |
| !! | ATAGAATATTTAAAGAGCAA+AGG | + | chr1.1:6032968-6032987 | None:intergenic | 20.0% |
| !! | ATCATTATCATTGCTTATTT+GGG | - | chr1.1:6031675-6031694 | MS.gene33010:CDS | 20.0% |
| !! | ATCATTCTTCAAACTATTAT+TGG | + | chr1.1:6034067-6034086 | None:intergenic | 20.0% |
| !! | CCAAAGAGAATATTTATAAT+CGG | + | chr1.1:6034124-6034143 | None:intergenic | 20.0% |
| !! | GAACAAGCTTATATAAATAA+GGG | + | chr1.1:6031552-6031571 | None:intergenic | 20.0% |
| !! | TATAGAAATAGATCAAACAA+TGG | + | chr1.1:6032824-6032843 | None:intergenic | 20.0% |
| !! | TGAACAAGCTTATATAAATA+AGG | + | chr1.1:6031553-6031572 | None:intergenic | 20.0% |
| !!! | AGTATTTTATTATAGCCAAA+TGG | + | chr1.1:6032410-6032429 | None:intergenic | 20.0% |
| !!! | AGTGAAATGTTTATTTTAGA+AGG | + | chr1.1:6033977-6033996 | None:intergenic | 20.0% |
| !!! | AGTTTTTAAAAGACGTTTAT+TGG | - | chr1.1:6034717-6034736 | MS.gene33010:intron | 20.0% |
| !!! | CTGAAATTTAATTTAGTTCA+TGG | + | chr1.1:6033118-6033137 | None:intergenic | 20.0% |
| !!! | GCTCTTTAAATATTCTATTT+TGG | - | chr1.1:6032970-6032989 | MS.gene33010:intron | 20.0% |
| !!! | GTTTTTAAAAGACGTTTATT+GGG | - | chr1.1:6034718-6034737 | MS.gene33010:intron | 20.0% |
| !!! | TTTTTAAAAGACGTTTATTG+GGG | - | chr1.1:6034719-6034738 | MS.gene33010:intron | 20.0% |
| ! | AAAATTGAATCCTTCTTGAT+TGG | + | chr1.1:6033678-6033697 | None:intergenic | 25.0% |
| ! | AAAGATAATAGATAAGCTGA+TGG | - | chr1.1:6035246-6035265 | MS.gene33010:intron | 25.0% |
| ! | AAATATATTCATACGTTCGT+TGG | + | chr1.1:6031013-6031032 | None:intergenic | 25.0% |
| ! | AAATATGACATCAAGAAAGT+AGG | + | chr1.1:6034223-6034242 | None:intergenic | 25.0% |
| ! | AATCAAAGATGCAATATGAT+AGG | + | chr1.1:6032875-6032894 | None:intergenic | 25.0% |
| ! | AATCCTAGAACTTAAAAGAA+TGG | + | chr1.1:6031580-6031599 | None:intergenic | 25.0% |
| ! | AGAGTGTATTTATTTGATGA+AGG | + | chr1.1:6032796-6032815 | None:intergenic | 25.0% |
| ! | AGGATATTAAATAAAGAGTG+TGG | - | chr1.1:6032585-6032604 | MS.gene33010:intron | 25.0% |
| ! | ATTGGTGAATGACAATAAAA+AGG | - | chr1.1:6033580-6033599 | MS.gene33010:intron | 25.0% |
| ! | ATTTGTTCAATTTGTGAAGT+TGG | - | chr1.1:6031889-6031908 | MS.gene33010:intron | 25.0% |
| ! | CACTTAATCATTTATCATGT+AGG | - | chr1.1:6031301-6031320 | MS.gene33010:CDS | 25.0% |
| ! | CATCATTATCATTGCTTATT+TGG | - | chr1.1:6031674-6031693 | MS.gene33010:CDS | 25.0% |
| ! | CCGATTATAAATATTCTCTT+TGG | - | chr1.1:6034121-6034140 | MS.gene33010:intron | 25.0% |
| ! | CTAGTCATGAATTATTAAGT+TGG | + | chr1.1:6031964-6031983 | None:intergenic | 25.0% |
| ! | GAAACAAAGTGACATTATAT+AGG | - | chr1.1:6032067-6032086 | MS.gene33010:intron | 25.0% |
| ! | GAACATTGAAGAAGAAATTT+AGG | - | chr1.1:6033400-6033419 | MS.gene33010:intron | 25.0% |
| ! | GTATATTGTAATAAAGAGTG+TGG | - | chr1.1:6032560-6032579 | MS.gene33010:intron | 25.0% |
| !! | AACATAAAAGCATAAGAGAA+AGG | + | chr1.1:6031244-6031263 | None:intergenic | 25.0% |
| !! | ATAAAATGTTTCACTAGTCT+TGG | + | chr1.1:6031773-6031792 | None:intergenic | 25.0% |
| !! | ATATTTATAATCGGTTTCAG+AGG | + | chr1.1:6034115-6034134 | None:intergenic | 25.0% |
| !! | TATTAAATAAAGAGTGTGGT+AGG | - | chr1.1:6032589-6032608 | MS.gene33010:intron | 25.0% |
| !!! | ATTTTTTCTGTATGACACTT+GGG | - | chr1.1:6034239-6034258 | MS.gene33010:intron | 25.0% |
| !!! | TAGGGCATTTCTTAATTTTA+TGG | - | chr1.1:6034273-6034292 | MS.gene33010:intron | 25.0% |
| !!! | TATTGTTTGGTCTTGTTATA+GGG | - | chr1.1:6031818-6031837 | MS.gene33010:CDS | 25.0% |
| !!! | TATTTTTTCTGTATGACACT+TGG | - | chr1.1:6034238-6034257 | MS.gene33010:intron | 25.0% |
| !!! | TCTTTTAAGTTCTAGGATTT+GGG | - | chr1.1:6031581-6031600 | MS.gene33010:CDS | 25.0% |
| !!! | TGCTTAGTTTGTTTATTGTT+TGG | - | chr1.1:6031805-6031824 | MS.gene33010:CDS | 25.0% |
| !!! | TTATTGTTTGGTCTTGTTAT+AGG | - | chr1.1:6031817-6031836 | MS.gene33010:CDS | 25.0% |
| !!! | TTCTTTTAAGTTCTAGGATT+TGG | - | chr1.1:6031580-6031599 | MS.gene33010:CDS | 25.0% |
| AATCAGCTCTATCATAGTTA+TGG | - | chr1.1:6031722-6031741 | MS.gene33010:CDS | 30.0% | |
| AATTATTCATTGCACAATCC+AGG | - | chr1.1:6033036-6033055 | MS.gene33010:intron | 30.0% | |
| AATTGAAATGTGTTCATCTG+AGG | + | chr1.1:6034783-6034802 | None:intergenic | 30.0% | |
| ACAAACAATGCTTCTAAACA+AGG | + | chr1.1:6033895-6033914 | None:intergenic | 30.0% | |
| ACAGGCTTATATTTCTCTAA+CGG | + | chr1.1:6033157-6033176 | None:intergenic | 30.0% | |
| ACCAAAATGCTTAAACATGA+AGG | + | chr1.1:6034326-6034345 | None:intergenic | 30.0% | |
| ATTATTCATTGCACAATCCA+GGG | - | chr1.1:6033037-6033056 | MS.gene33010:intron | 30.0% | |
| ATTGTAGTGTGATTTCTTTC+CGG | - | chr1.1:6031648-6031667 | MS.gene33010:CDS | 30.0% | |
| GAATATTTAAAGAGCAAAGG+TGG | + | chr1.1:6032965-6032984 | None:intergenic | 30.0% | |
| GAGAAATGCTAGTTGTAATT+TGG | - | chr1.1:6033606-6033625 | MS.gene33010:intron | 30.0% | |
| GCTTAACTAACTGAAAAACA+CGG | + | chr1.1:6033873-6033892 | None:intergenic | 30.0% | |
| GGTTATTCAATTAGATCTGT+GGG | - | chr1.1:6033747-6033766 | MS.gene33010:intron | 30.0% | |
| GTCATATGATATGTTGCATT+GGG | - | chr1.1:6033725-6033744 | MS.gene33010:intron | 30.0% | |
| GTTCATTTCATAGTTGTCAA+AGG | + | chr1.1:6031919-6031938 | None:intergenic | 30.0% | |
| GTTTATTTCCAATGACCATT+AGG | - | chr1.1:6031261-6031280 | MS.gene33010:CDS | 30.0% | |
| TAAGTGCGTTTAATCAAACA+GGG | + | chr1.1:6031287-6031306 | None:intergenic | 30.0% | |
| TACACAAGAATCAAAGTCAA+TGG | + | chr1.1:6031079-6031098 | None:intergenic | 30.0% | |
| TATAGGGTTGTTAATTCCTT+GGG | - | chr1.1:6031834-6031853 | MS.gene33010:CDS | 30.0% | |
| TCATATGATATGTTGCATTG+GGG | - | chr1.1:6033726-6033745 | MS.gene33010:intron | 30.0% | |
| TGAAACAGTGTATGGATAAT+TGG | - | chr1.1:6031438-6031457 | MS.gene33010:CDS | 30.0% | |
| TGAAGAAGAAATTTAGGAAG+TGG | - | chr1.1:6033406-6033425 | MS.gene33010:intron | 30.0% | |
| TGATAAAGACTTAAGCCATT+TGG | - | chr1.1:6032392-6032411 | MS.gene33010:intron | 30.0% | |
| TGCCATTGTTTCAAAGTTAA+TGG | - | chr1.1:6034156-6034175 | MS.gene33010:intron | 30.0% | |
| TTAAGTGCGTTTAATCAAAC+AGG | + | chr1.1:6031288-6031307 | None:intergenic | 30.0% | |
| TTATAGGGTTGTTAATTCCT+TGG | - | chr1.1:6031833-6031852 | MS.gene33010:CDS | 30.0% | |
| TTATGCCTCAGTTGTATAAA+TGG | - | chr1.1:6032632-6032651 | MS.gene33010:intron | 30.0% | |
| ! | AAAGTATTAGATGTAGGTTG+TGG | + | chr1.1:6032941-6032960 | None:intergenic | 30.0% |
| ! | AAATAAGGGTTTGTTTCGAT+TGG | + | chr1.1:6031538-6031557 | None:intergenic | 30.0% |
| ! | AATTGTATCAGTTTTTCCTG+TGG | - | chr1.1:6033796-6033815 | MS.gene33010:intron | 30.0% |
| ! | AGTGAAGTATTTGATAGTAG+CGG | - | chr1.1:6035079-6035098 | MS.gene33010:CDS | 30.0% |
| ! | CGATTTCTGCTTCTAAATTT+TGG | - | chr1.1:6032846-6032865 | MS.gene33010:intron | 30.0% |
| ! | GTGAATTTTTGCAAGAAAGT+TGG | - | chr1.1:6034890-6034909 | MS.gene33010:intron | 30.0% |
| ! | TATGACACGTTTGCTAAAAT+CGG | + | chr1.1:6032193-6032212 | None:intergenic | 30.0% |
| ! | TCTATTATCTTTTGTAACGC+TGG | + | chr1.1:6035238-6035257 | None:intergenic | 30.0% |
| ! | TGTGTATTTTGTATTGTTGC+TGG | - | chr1.1:6031093-6031112 | MS.gene33010:CDS | 30.0% |
| ! | TTGTAATAAAGAGTGTGGTT+AGG | - | chr1.1:6032565-6032584 | MS.gene33010:intron | 30.0% |
| ! | TTTGATCCCTTTGAAAATGT+CGG | - | chr1.1:6033454-6033473 | MS.gene33010:intron | 30.0% |
| ! | TTTGTAATGGAGTAGTGTTA+GGG | - | chr1.1:6033286-6033305 | MS.gene33010:intron | 30.0% |
| !! | CACCATTAACTTTGAAACAA+TGG | + | chr1.1:6034161-6034180 | None:intergenic | 30.0% |
| !! | CTTGTTTTCATAAACTCTAC+GGG | + | chr1.1:6031417-6031436 | None:intergenic | 30.0% |
| !! | TGGGAGATTTTAGTCAATTT+TGG | - | chr1.1:6033828-6033847 | MS.gene33010:intron | 30.0% |
| !! | TTGCACAAATTTGCTGATTT+GGG | + | chr1.1:6031183-6031202 | None:intergenic | 30.0% |
| !!! | ACACCATTCTTTTAAGTTCT+AGG | - | chr1.1:6031574-6031593 | MS.gene33010:CDS | 30.0% |
| !!! | CCTTGTTTTCATAAACTCTA+CGG | + | chr1.1:6031418-6031437 | None:intergenic | 30.0% |
| !!! | TTTTGGTTTTTATTGCTTCC+TGG | - | chr1.1:6033845-6033864 | MS.gene33010:intron | 30.0% |
| AAACAAGGTGAAACAGTGTA+TGG | - | chr1.1:6031430-6031449 | MS.gene33010:CDS | 35.0% | |
| AAAGGAACCTTACCAAGAAA+GGG | + | chr1.1:6035142-6035161 | None:intergenic | 35.0% | |
| AAAGTTGGAGTGAAAGTTCT+TGG | - | chr1.1:6034905-6034924 | MS.gene33010:intron | 35.0% | |
| AAATAGAATTCCTCGTTAGG+TGG | - | chr1.1:6032141-6032160 | MS.gene33010:intron | 35.0% | |
| AAGAAATTTAGGAAGTGGAG+TGG | - | chr1.1:6033411-6033430 | MS.gene33010:intron | 35.0% | |
| AAGTTGGAGTGAAAGTTCTT+GGG | - | chr1.1:6034906-6034925 | MS.gene33010:intron | 35.0% | |
| ACAATCTTTATCTGCAAAGC+AGG | + | chr1.1:6035203-6035222 | None:intergenic | 35.0% | |
| ACTATCAAATACTTCACTGC+AGG | + | chr1.1:6035077-6035096 | None:intergenic | 35.0% | |
| ACTCACCATTTATACAACTG+AGG | + | chr1.1:6032640-6032659 | None:intergenic | 35.0% | |
| AGAAATTTAGGAAGTGGAGT+GGG | - | chr1.1:6033412-6033431 | MS.gene33010:intron | 35.0% | |
| AGAAGGAGAAAAATCTCTCT+CGG | + | chr1.1:6032721-6032740 | None:intergenic | 35.0% | |
| AGATTAGACTCAACATAGAC+AGG | + | chr1.1:6034611-6034630 | None:intergenic | 35.0% | |
| AGGAAATAGAATTCCTCGTT+AGG | - | chr1.1:6032138-6032157 | MS.gene33010:intron | 35.0% | |
| AGTTGTATAAATGGTGAGTG+AGG | - | chr1.1:6032641-6032660 | MS.gene33010:intron | 35.0% | |
| ATAAGCTGATGGAAACTAGT+GGG | - | chr1.1:6035257-6035276 | MS.gene33010:intron | 35.0% | |
| ATTGAATGATGTCCAACACA+TGG | + | chr1.1:6031941-6031960 | None:intergenic | 35.0% | |
| CACTGTGAAACATAAGATAC+TGG | - | chr1.1:6034409-6034428 | MS.gene33010:intron | 35.0% | |
| CAGTATCTTATGTTTCACAG+TGG | + | chr1.1:6034411-6034430 | None:intergenic | 35.0% | |
| CCGTAGAGTTTATGAAAACA+AGG | - | chr1.1:6031415-6031434 | MS.gene33010:CDS | 35.0% | |
| CTATGAAATGAACCATGTGT+TGG | - | chr1.1:6031926-6031945 | MS.gene33010:intron | 35.0% | |
| CTTCTGGACATTGATATTTG+TGG | - | chr1.1:6034518-6034537 | MS.gene33010:intron | 35.0% | |
| GAGACAACACACAAAAAGAT+AGG | - | chr1.1:6032118-6032137 | MS.gene33010:intron | 35.0% | |
| GCAATGATTTCCAATCAAGA+AGG | - | chr1.1:6033665-6033684 | MS.gene33010:intron | 35.0% | |
| GCGATTAAATTCAGCATTTC+AGG | + | chr1.1:6035055-6035074 | None:intergenic | 35.0% | |
| GGAAGTGAACAAACAAACTA+TGG | + | chr1.1:6032437-6032456 | None:intergenic | 35.0% | |
| GGGTTATTCAATTAGATCTG+TGG | - | chr1.1:6033746-6033765 | MS.gene33010:intron | 35.0% | |
| GGTCATATGATATGTTGCAT+TGG | - | chr1.1:6033724-6033743 | MS.gene33010:intron | 35.0% | |
| GTCTATGTTGAGTCTAATCT+CGG | - | chr1.1:6034611-6034630 | MS.gene33010:intron | 35.0% | |
| GTCTTTATCAATGAAGCTCT+TGG | + | chr1.1:6032382-6032401 | None:intergenic | 35.0% | |
| TAAAGGAACCTTACCAAGAA+AGG | + | chr1.1:6035143-6035162 | None:intergenic | 35.0% | |
| TATGACCTGCAAAATAATGC+AGG | + | chr1.1:6033711-6033730 | None:intergenic | 35.0% | |
| TCGGTATCTTCAAAAAACAC+AGG | + | chr1.1:6032174-6032193 | None:intergenic | 35.0% | |
| TCTATGTTGAGTCTAATCTC+GGG | - | chr1.1:6034612-6034631 | MS.gene33010:intron | 35.0% | |
| TGATGAAGGAAAACTGTAGA+AGG | + | chr1.1:6032782-6032801 | None:intergenic | 35.0% | |
| TGGTGAGATGAAAGATGTTA+CGG | - | chr1.1:6034997-6035016 | MS.gene33010:intron | 35.0% | |
| TGTGCTTCAATATTGTGTGT+TGG | - | chr1.1:6033503-6033522 | MS.gene33010:intron | 35.0% | |
| TTGTAGTGTGATTTCTTTCC+GGG | - | chr1.1:6031649-6031668 | MS.gene33010:CDS | 35.0% | |
| TTTAATCAAACAGGGCCTAA+TGG | + | chr1.1:6031279-6031298 | None:intergenic | 35.0% | |
| ! | CTTTGAAAAACACCTACTAG+AGG | - | chr1.1:6032273-6032292 | MS.gene33010:intron | 35.0% |
| ! | GACATTTTCAAAGGGATCAA+AGG | + | chr1.1:6033455-6033474 | None:intergenic | 35.0% |
| ! | GATAAGGAGGTTGTTTCAAT+GGG | - | chr1.1:6033245-6033264 | MS.gene33010:intron | 35.0% |
| ! | GCCTTCATGTTTAAGCATTT+TGG | - | chr1.1:6034322-6034341 | MS.gene33010:intron | 35.0% |
| ! | GTTTGTAATGGAGTAGTGTT+AGG | - | chr1.1:6033285-6033304 | MS.gene33010:intron | 35.0% |
| ! | GTTTTCTATCATGCTTTCAC+TGG | - | chr1.1:6033997-6034016 | MS.gene33010:intron | 35.0% |
| ! | TTGTAATGGAGTAGTGTTAG+GGG | - | chr1.1:6033287-6033306 | MS.gene33010:intron | 35.0% |
| ! | TTGTTTCCCTTTTGCGTATT+AGG | + | chr1.1:6032054-6032073 | None:intergenic | 35.0% |
| ! | TTTCCTGTGGTATTTTGTGT+GGG | - | chr1.1:6033809-6033828 | MS.gene33010:intron | 35.0% |
| ! | TTTTCCTGTGGTATTTTGTG+TGG | - | chr1.1:6033808-6033827 | MS.gene33010:intron | 35.0% |
| !! | AGCATGGAAGCATTCTATTA+TGG | + | chr1.1:6032302-6032321 | None:intergenic | 35.0% |
| !! | GCATGGAAGCATTCTATTAT+GGG | + | chr1.1:6032301-6032320 | None:intergenic | 35.0% |
| !! | GGTGGAAAAGTATTAGATGT+AGG | + | chr1.1:6032947-6032966 | None:intergenic | 35.0% |
| !! | GTTGCACAAATTTGCTGATT+TGG | + | chr1.1:6031184-6031203 | None:intergenic | 35.0% |
| !! | GTTTACCTGCATTATTTTGC+AGG | - | chr1.1:6033703-6033722 | MS.gene33010:intron | 35.0% |
| !! | TCAATAAGAGAGACTTGTTG+AGG | + | chr1.1:6034857-6034876 | None:intergenic | 35.0% |
| !! | TGGGTTGATTAGCAAAGAAA+TGG | - | chr1.1:6031694-6031713 | MS.gene33010:CDS | 35.0% |
| !!! | ATTTTGGCTCTAATGAACCT+AGG | - | chr1.1:6032986-6033005 | MS.gene33010:intron | 35.0% |
| !!! | TGCATTGGTTTTTGCAGATA+TGG | - | chr1.1:6034364-6034383 | MS.gene33010:intron | 35.0% |
| AATAGAATGCTTCCATGCTC+AGG | - | chr1.1:6032303-6032322 | MS.gene33010:intron | 40.0% | |
| AATGAAGCTCTTGGATACAG+AGG | + | chr1.1:6032373-6032392 | None:intergenic | 40.0% | |
| AGAGTTAGATAGGTGGAAGT+GGG | - | chr1.1:6033326-6033345 | MS.gene33010:intron | 40.0% | |
| AGATGAAAGATGTTACGGAG+TGG | - | chr1.1:6035002-6035021 | MS.gene33010:intron | 40.0% | |
| AGATGTTACGGAGTGGATAT+CGG | - | chr1.1:6035009-6035028 | MS.gene33010:intron | 40.0% | |
| AGTTGGAGTGAAAGTTCTTG+GGG | - | chr1.1:6034907-6034926 | MS.gene33010:intron | 40.0% | |
| ATATAAGCCTGTCGCTGAAA+TGG | - | chr1.1:6033165-6033184 | MS.gene33010:intron | 40.0% | |
| ATCCAGACGAAGCTGTTATA+TGG | - | chr1.1:6034663-6034682 | MS.gene33010:intron | 40.0% | |
| ATTCCTTGGGCATTTGATAG+TGG | - | chr1.1:6031847-6031866 | MS.gene33010:CDS | 40.0% | |
| ATTGCACAATCCAGGGAATT+GGG | - | chr1.1:6033044-6033063 | MS.gene33010:intron | 40.0% | |
| ATTTGTGCAACTGCTCCTAA+AGG | - | chr1.1:6031193-6031212 | MS.gene33010:CDS | 40.0% | |
| CATGAACAACACACTAGCTA+TGG | + | chr1.1:6032238-6032257 | None:intergenic | 40.0% | |
| CATTAGGCAAGTGTGGAAAT+CGG | + | chr1.1:6032018-6032037 | None:intergenic | 40.0% | |
| CGAGGGCTGATAAGTAAAAA+GGG | - | chr1.1:6032537-6032556 | MS.gene33010:intron | 40.0% | |
| CTAGATGCTGCTAATGTAGA+CGG | - | chr1.1:6034812-6034831 | MS.gene33010:intron | 40.0% | |
| CTATGTTGAGTCTAATCTCG+GGG | - | chr1.1:6034613-6034632 | MS.gene33010:intron | 40.0% | |
| GAGGGCTGATAAGTAAAAAG+GGG | - | chr1.1:6032538-6032557 | MS.gene33010:intron | 40.0% | |
| GATAAGCTGATGGAAACTAG+TGG | - | chr1.1:6035256-6035275 | MS.gene33010:intron | 40.0% | |
| GCTTCAATATTGTGTGTTGG+AGG | - | chr1.1:6033506-6033525 | MS.gene33010:intron | 40.0% | |
| GGAAAATCTGATGCATGTGA+AGG | - | chr1.1:6031154-6031173 | MS.gene33010:CDS | 40.0% | |
| GTTGAAGATGTGTAACGAGA+TGG | - | chr1.1:6035111-6035130 | MS.gene33010:CDS | 40.0% | |
| GTTTCAATGGGAAAAGGAGT+TGG | - | chr1.1:6033257-6033276 | MS.gene33010:intron | 40.0% | |
| TAAGATGCTGAATCACACCT+AGG | + | chr1.1:6033006-6033025 | None:intergenic | 40.0% | |
| TATCTAGTACATGAGCACGA+AGG | + | chr1.1:6031629-6031648 | None:intergenic | 40.0% | |
| TGAGGCTAGTGAAGATTGAT+GGG | - | chr1.1:6032659-6032678 | MS.gene33010:intron | 40.0% | |
| TTCCATGCTCAGGAAAAAGA+TGG | - | chr1.1:6032313-6032332 | MS.gene33010:intron | 40.0% | |
| TTGCAAAGCTGTGGATCTAA+AGG | + | chr1.1:6035160-6035179 | None:intergenic | 40.0% | |
| TTGCCTAATGGTGAAGTTAG+CGG | - | chr1.1:6032028-6032047 | MS.gene33010:intron | 40.0% | |
| TTTAGATCCACAGCTTTGCA+AGG | - | chr1.1:6035159-6035178 | MS.gene33010:intron | 40.0% | |
| TTTCACAGTGGCCATTCTTT+CGG | + | chr1.1:6034399-6034418 | None:intergenic | 40.0% | |
| ! | AACCATCTTTTTCCTGAGCA+TGG | + | chr1.1:6032318-6032337 | None:intergenic | 40.0% |
| ! | AGCAATGATAATGATGAGCC+CGG | + | chr1.1:6031670-6031689 | None:intergenic | 40.0% |
| ! | AGCTAGTGTGTTGTTCATGT+GGG | - | chr1.1:6032239-6032258 | MS.gene33010:intron | 40.0% |
| ! | ATCCCTTTGAAAATGTCGGT+TGG | - | chr1.1:6033458-6033477 | MS.gene33010:intron | 40.0% |
| ! | CTCCAACCGACATTTTCAAA+GGG | + | chr1.1:6033463-6033482 | None:intergenic | 40.0% |
| ! | GAAGTATTTGATAGTAGCGG+TGG | - | chr1.1:6035082-6035101 | MS.gene33010:CDS | 40.0% |
| ! | GAGGTTGTTTCAATGGGAAA+AGG | - | chr1.1:6033251-6033270 | MS.gene33010:intron | 40.0% |
| ! | GGATAAGGAGGTTGTTTCAA+TGG | - | chr1.1:6033244-6033263 | MS.gene33010:intron | 40.0% |
| ! | GTGACTTGTGAGACTGATTA+TGG | + | chr1.1:6031482-6031501 | None:intergenic | 40.0% |
| ! | GTGGGTATAATTTTGTGCAG+AGG | - | chr1.1:6031866-6031885 | MS.gene33010:CDS | 40.0% |
| ! | TACGGGATAACTTGCGAAAA+CGG | + | chr1.1:6031400-6031419 | None:intergenic | 40.0% |
| ! | TAGCTAGTGTGTTGTTCATG+TGG | - | chr1.1:6032238-6032257 | MS.gene33010:intron | 40.0% |
| ! | TTCCTTGGGCATTTGATAGT+GGG | - | chr1.1:6031848-6031867 | MS.gene33010:CDS | 40.0% |
| !! | ATACTGGTCTTGTCAGGAAA+GGG | - | chr1.1:6034425-6034444 | MS.gene33010:intron | 40.0% |
| !! | ATTAGATCTGTGGGTTAGCT+AGG | - | chr1.1:6033756-6033775 | MS.gene33010:intron | 40.0% |
| !! | CATAAGATACTGGTCTTGTC+AGG | - | chr1.1:6034419-6034438 | MS.gene33010:intron | 40.0% |
| !! | TATGACACTTGGGCTGTTTT+TGG | - | chr1.1:6034249-6034268 | MS.gene33010:intron | 40.0% |
| !! | TTGATAAGCCCATTTTTGCG+TGG | + | chr1.1:6034695-6034714 | None:intergenic | 40.0% |
| !!! | ACTTGGGCTGTTTTTGGATA+GGG | - | chr1.1:6034255-6034274 | MS.gene33010:intron | 40.0% |
| !!! | GGATTTTCAAGTTGGTCTTC+TGG | - | chr1.1:6034502-6034521 | MS.gene33010:intron | 40.0% |
| AAACAGGGCCTAATGGTCAT+TGG | + | chr1.1:6031272-6031291 | None:intergenic | 45.0% | |
| AAAGCAGGATCTGCCTTCTT+CGG | + | chr1.1:6035188-6035207 | None:intergenic | 45.0% | |
| AATCTCGGGGTCATGTCAAT+TGG | - | chr1.1:6034626-6034645 | MS.gene33010:intron | 45.0% | |
| ACTACAACCATTTCAGCGAC+AGG | + | chr1.1:6033175-6033194 | None:intergenic | 45.0% | |
| ACTTCACCATTAGGCAAGTG+TGG | + | chr1.1:6032025-6032044 | None:intergenic | 45.0% | |
| ACTTCCCTGTGTTCCTCATT+GGG | - | chr1.1:6032451-6032470 | MS.gene33010:intron | 45.0% | |
| ATAACAGCTTCGTCTGGATG+AGG | + | chr1.1:6034662-6034681 | None:intergenic | 45.0% | |
| ATATTGTGTGTTGGAGGCTG+TGG | - | chr1.1:6033512-6033531 | MS.gene33010:intron | 45.0% | |
| ATCTCGGGGTCATGTCAATT+GGG | - | chr1.1:6034627-6034646 | MS.gene33010:intron | 45.0% | |
| ATGCTTTCACTGGACATTGC+AGG | - | chr1.1:6034007-6034026 | MS.gene33010:intron | 45.0% | |
| CAACAAAAGCTCTTCGATGC+AGG | + | chr1.1:6032348-6032367 | None:intergenic | 45.0% | |
| CATTGCACAATCCAGGGAAT+TGG | - | chr1.1:6033043-6033062 | MS.gene33010:intron | 45.0% | |
| CGATGGAGAGAGAGTTAGAT+AGG | - | chr1.1:6033316-6033335 | MS.gene33010:intron | 45.0% | |
| CGATTTCCACACTTGCCTAA+TGG | - | chr1.1:6032016-6032035 | MS.gene33010:intron | 45.0% | |
| CGTCTACATTAGCAGCATCT+AGG | + | chr1.1:6034814-6034833 | None:intergenic | 45.0% | |
| CTATTATGGGAGCCTCTAGT+AGG | + | chr1.1:6032288-6032307 | None:intergenic | 45.0% | |
| CTCCATATAACAGCTTCGTC+TGG | + | chr1.1:6034668-6034687 | None:intergenic | 45.0% | |
| CTTCTAGGCCAAGCATCTTT+GGG | + | chr1.1:6034553-6034572 | None:intergenic | 45.0% | |
| GAAGATGTGTAACGAGATGG+CGG | - | chr1.1:6035114-6035133 | MS.gene33010:CDS | 45.0% | |
| GACGAAGCTGTTATATGGAG+AGG | - | chr1.1:6034668-6034687 | MS.gene33010:intron | 45.0% | |
| GAGAGTTAGATAGGTGGAAG+TGG | - | chr1.1:6033325-6033344 | MS.gene33010:intron | 45.0% | |
| GAGGCTAGTGAAGATTGATG+GGG | - | chr1.1:6032660-6032679 | MS.gene33010:intron | 45.0% | |
| GCGAGGGCTGATAAGTAAAA+AGG | - | chr1.1:6032536-6032555 | MS.gene33010:intron | 45.0% | |
| GCTCTCGAAACAGAGTTTGA+TGG | - | chr1.1:6032505-6032524 | MS.gene33010:intron | 45.0% | |
| GGGGTTGTAGAGAATATGAG+TGG | - | chr1.1:6034926-6034945 | MS.gene33010:intron | 45.0% | |
| GGTGTATCTCTTGACCTTCT+AGG | + | chr1.1:6034568-6034587 | None:intergenic | 45.0% | |
| GTCGCTGAAATGGTTGTAGT+GGG | - | chr1.1:6033175-6033194 | MS.gene33010:intron | 45.0% | |
| GTGAGGCTAGTGAAGATTGA+TGG | - | chr1.1:6032658-6032677 | MS.gene33010:intron | 45.0% | |
| TACCCACTATCAAATGCCCA+AGG | + | chr1.1:6031853-6031872 | None:intergenic | 45.0% | |
| TAGCGGCCTAATACGCAAAA+GGG | - | chr1.1:6032045-6032064 | MS.gene33010:intron | 45.0% | |
| TCAATGGGAAAAGGAGTTGG+TGG | - | chr1.1:6033260-6033279 | MS.gene33010:intron | 45.0% | |
| TCGCTGAAATGGTTGTAGTG+GGG | - | chr1.1:6033176-6033195 | MS.gene33010:intron | 45.0% | |
| TCTCCCACACAAAATACCAC+AGG | + | chr1.1:6033815-6033834 | None:intergenic | 45.0% | |
| TGATGGGGACTGAGGAATAT+TGG | - | chr1.1:6032675-6032694 | MS.gene33010:intron | 45.0% | |
| TGGAGAGAGAGTTAGATAGG+TGG | - | chr1.1:6033319-6033338 | MS.gene33010:intron | 45.0% | |
| TGGAGTGAACCATCACAGTT+AGG | - | chr1.1:6032695-6032714 | MS.gene33010:intron | 45.0% | |
| TGTCGCTGAAATGGTTGTAG+TGG | - | chr1.1:6033174-6033193 | MS.gene33010:intron | 45.0% | |
| TGTGGTAAACTCGAAGAAGG+AGG | - | chr1.1:6033530-6033549 | MS.gene33010:intron | 45.0% | |
| TTAGATAGGTGGAAGTGGGA+AGG | - | chr1.1:6033330-6033349 | MS.gene33010:intron | 45.0% | |
| TTAGCGGCCTAATACGCAAA+AGG | - | chr1.1:6032044-6032063 | MS.gene33010:intron | 45.0% | |
| TTTCCAGCAGAATCAGACTG+AGG | + | chr1.1:6031139-6031158 | None:intergenic | 45.0% | |
| TTTGATGGAGATCAGAGCGA+GGG | - | chr1.1:6032520-6032539 | MS.gene33010:intron | 45.0% | |
| ! | ACTTGAGATTTGAGATGGGC+TGG | + | chr1.1:6034958-6034977 | None:intergenic | 45.0% |
| ! | AGTGTGTTGTTCATGTGGGA+GGG | - | chr1.1:6032243-6032262 | MS.gene33010:intron | 45.0% |
| ! | ATGTGTTCATCTGAGGTTCC+AGG | + | chr1.1:6034776-6034795 | None:intergenic | 45.0% |
| ! | CCTCCAACCGACATTTTCAA+AGG | + | chr1.1:6033464-6033483 | None:intergenic | 45.0% |
| ! | CCTTTGAAAATGTCGGTTGG+AGG | - | chr1.1:6033461-6033480 | MS.gene33010:intron | 45.0% |
| ! | CTGTCAATGACGGAAAGCAA+TGG | - | chr1.1:6035280-6035299 | MS.gene33010:CDS | 45.0% |
| ! | CTTGAGATTTGAGATGGGCT+GGG | + | chr1.1:6034957-6034976 | None:intergenic | 45.0% |
| ! | GAGATTTTTCTCCTTCTCCG+AGG | - | chr1.1:6032724-6032743 | MS.gene33010:intron | 45.0% |
| ! | GGTTAGCTAGGAAGTTGTGT+TGG | - | chr1.1:6033768-6033787 | MS.gene33010:intron | 45.0% |
| ! | GTATTTGATAGTAGCGGTGG+TGG | - | chr1.1:6035085-6035104 | MS.gene33010:CDS | 45.0% |
| ! | TAGTGTGTTGTTCATGTGGG+AGG | - | chr1.1:6032242-6032261 | MS.gene33010:intron | 45.0% |
| !! | AAAGGTGAAGAGTACCAACC+AGG | + | chr1.1:6031226-6031245 | None:intergenic | 45.0% |
| !! | AACTAGTGGGCTGTCAATGA+CGG | - | chr1.1:6035270-6035289 | MS.gene33010:CDS | 45.0% |
| !! | AAGAGAGACTTGTTGAGGAG+TGG | + | chr1.1:6034852-6034871 | None:intergenic | 45.0% |
| !! | AAGGTGAAGAGTACCAACCA+GGG | + | chr1.1:6031225-6031244 | None:intergenic | 45.0% |
| !! | AGTGTTAGGGGTTGATTCGA+TGG | - | chr1.1:6033299-6033318 | MS.gene33010:intron | 45.0% |
| !! | GAGTTGGTGGTGGTTTGTAA+TGG | - | chr1.1:6033273-6033292 | MS.gene33010:intron | 45.0% |
| !! | GATACTGGTCTTGTCAGGAA+AGG | - | chr1.1:6034424-6034443 | MS.gene33010:intron | 45.0% |
| !!! | CACTTGGGCTGTTTTTGGAT+AGG | - | chr1.1:6034254-6034273 | MS.gene33010:intron | 45.0% |
| !!! | GCTGCAAGGGATTTTCAAGT+TGG | - | chr1.1:6034494-6034513 | MS.gene33010:intron | 45.0% |
| AGCTAACGCAAATGCCAGCT+GGG | + | chr1.1:6034477-6034496 | None:intergenic | 50.0% | |
| AGGATGTCTACCACCTAACG+AGG | + | chr1.1:6032154-6032173 | None:intergenic | 50.0% | |
| AGGCCGCTAACTTCACCATT+AGG | + | chr1.1:6032034-6032053 | None:intergenic | 50.0% | |
| AGTGGCCATTCTTTCGGCAA+TGG | + | chr1.1:6034393-6034412 | None:intergenic | 50.0% | |
| AGTGTGGTAGGCTGCTTAGT+TGG | - | chr1.1:6032601-6032620 | MS.gene33010:intron | 50.0% | |
| ATACGTTCGTTGGCATCCTC+GGG | + | chr1.1:6031003-6031022 | None:intergenic | 50.0% | |
| ATAGGTGGAAGTGGGAAGGA+GGG | - | chr1.1:6033334-6033353 | MS.gene33010:intron | 50.0% | |
| CACTTCCCTGTGTTCCTCAT+TGG | - | chr1.1:6032450-6032469 | MS.gene33010:intron | 50.0% | |
| CAGAATCAGACTGAGGACCT+GGG | + | chr1.1:6031132-6031151 | None:intergenic | 50.0% | |
| CATACGTTCGTTGGCATCCT+CGG | + | chr1.1:6031004-6031023 | None:intergenic | 50.0% | |
| CATAGACAGGAGACCAACCA+AGG | + | chr1.1:6034598-6034617 | None:intergenic | 50.0% | |
| CCAAAGATGCTTGGCCTAGA+AGG | - | chr1.1:6034551-6034570 | MS.gene33010:intron | 50.0% | |
| CCAAGCATCCCAAAGATGCT+TGG | - | chr1.1:6034542-6034561 | MS.gene33010:intron | 50.0% | |
| CCTGTGTTCCTCATTGGGAA+GGG | - | chr1.1:6032456-6032475 | MS.gene33010:intron | 50.0% | |
| CCTTCCCAATGAGGAACACA+GGG | + | chr1.1:6032458-6032477 | None:intergenic | 50.0% | |
| CCTTCTAGGCCAAGCATCTT+TGG | + | chr1.1:6034554-6034573 | None:intergenic | 50.0% | |
| CGCTGAAATGGTTGTAGTGG+GGG | - | chr1.1:6033177-6033196 | MS.gene33010:intron | 50.0% | |
| CTAATTGTTGATGCTCCGCC+TGG | - | chr1.1:6034755-6034774 | MS.gene33010:intron | 50.0% | |
| CTGGCATTTACAGATTGCCC+AGG | - | chr1.1:6031112-6031131 | MS.gene33010:CDS | 50.0% | |
| CTGTGTATCTCCCAATTCCC+TGG | + | chr1.1:6033057-6033076 | None:intergenic | 50.0% | |
| GAACAACGGAGATATACCCG+AGG | - | chr1.1:6030984-6031003 | MS.gene33010:CDS | 50.0% | |
| GAGATACACCAGAGCAACCT+TGG | - | chr1.1:6034578-6034597 | MS.gene33010:intron | 50.0% | |
| GGAGAGGTCCACGCAAAAAT+GGG | - | chr1.1:6034684-6034703 | MS.gene33010:intron | 50.0% | |
| GGCATTTGCGTTAGCTGCAA+GGG | - | chr1.1:6034481-6034500 | MS.gene33010:intron | 50.0% | |
| GGCTGTGGTAAACTCGAAGA+AGG | - | chr1.1:6033527-6033546 | MS.gene33010:intron | 50.0% | |
| GGTTGCCATTGCCGAAAGAA+TGG | - | chr1.1:6034385-6034404 | MS.gene33010:intron | 50.0% | |
| GTCAACATCCCTTCCCAATG+AGG | + | chr1.1:6032467-6032486 | None:intergenic | 50.0% | |
| GTGAAGATTGATGGGGACTG+AGG | - | chr1.1:6032667-6032686 | MS.gene33010:intron | 50.0% | |
| GTTTGATGGAGATCAGAGCG+AGG | - | chr1.1:6032519-6032538 | MS.gene33010:intron | 50.0% | |
| TAACTGAAAAACACGGCGCC+AGG | + | chr1.1:6033866-6033885 | None:intergenic | 50.0% | |
| TACACCAGAGCAACCTTGGT+TGG | - | chr1.1:6034582-6034601 | MS.gene33010:intron | 50.0% | |
| TGACCTTGAGCATCTGCTAC+AGG | - | chr1.1:6032483-6032502 | MS.gene33010:intron | 50.0% | |
| TGGAGAGGTCCACGCAAAAA+TGG | - | chr1.1:6034683-6034702 | MS.gene33010:intron | 50.0% | |
| TGGCATTTGCGTTAGCTGCA+AGG | - | chr1.1:6034480-6034499 | MS.gene33010:intron | 50.0% | |
| TTGTTCATGTGGGAGGGTGA+TGG | - | chr1.1:6032249-6032268 | MS.gene33010:intron | 50.0% | |
| ! | AAATGGTTGTAGTGGGGGTG+GGG | - | chr1.1:6033182-6033201 | MS.gene33010:intron | 50.0% |
| ! | ATGTCGGTTGGAGGCAAAAG+AGG | - | chr1.1:6033470-6033489 | MS.gene33010:intron | 50.0% |
| ! | GAAATGGTTGTAGTGGGGGT+GGG | - | chr1.1:6033181-6033200 | MS.gene33010:intron | 50.0% |
| ! | TGAAATGGTTGTAGTGGGGG+TGG | - | chr1.1:6033180-6033199 | MS.gene33010:intron | 50.0% |
| ! | TGTCGGTTGGAGGCAAAAGA+GGG | - | chr1.1:6033471-6033490 | MS.gene33010:intron | 50.0% |
| ! | TGTTCATCTGAGGTTCCAGG+CGG | + | chr1.1:6034773-6034792 | None:intergenic | 50.0% |
| ! | TTGTCAGGAAAGGGAGGTGT+TGG | - | chr1.1:6034434-6034453 | MS.gene33010:intron | 50.0% |
| !! | AGCTTGGCTCTGGTGTAGAT+TGG | - | chr1.1:6032747-6032766 | MS.gene33010:intron | 50.0% |
| !! | ATGGGAAAAGGAGTTGGTGG+TGG | - | chr1.1:6033263-6033282 | MS.gene33010:intron | 50.0% |
| !! | CCAAGCATCTTTGGGATGCT+TGG | + | chr1.1:6034545-6034564 | None:intergenic | 50.0% |
| !! | GCTTGGCTCTGGTGTAGATT+GGG | - | chr1.1:6032748-6032767 | MS.gene33010:intron | 50.0% |
| !! | TGGAGTGGGCTAAAGAGGTT+TGG | - | chr1.1:6033426-6033445 | MS.gene33010:intron | 50.0% |
| CAACCAGGGTCAGGTCCTTT+AGG | + | chr1.1:6031211-6031230 | None:intergenic | 55.0% | |
| CAGCTAACGCAAATGCCAGC+TGG | + | chr1.1:6034478-6034497 | None:intergenic | 55.0% | |
| CCCTGTGTTCCTCATTGGGA+AGG | - | chr1.1:6032455-6032474 | MS.gene33010:intron | 55.0% | |
| CCCTTCCCAATGAGGAACAC+AGG | + | chr1.1:6032459-6032478 | None:intergenic | 55.0% | |
| CGAGGGGGAATTGGATAAGG+AGG | - | chr1.1:6033232-6033251 | MS.gene33010:intron | 55.0% | |
| CTAAAGGACCTGACCCTGGT+TGG | - | chr1.1:6031209-6031228 | MS.gene33010:CDS | 55.0% | |
| CTCTCTCGGCCTAACTGTGA+TGG | + | chr1.1:6032707-6032726 | None:intergenic | 55.0% | |
| CTTTGCAAGGCAGCCGAAGA+AGG | - | chr1.1:6035172-6035191 | MS.gene33010:intron | 55.0% | |
| GAGACCAACCAAGGTTGCTC+TGG | + | chr1.1:6034589-6034608 | None:intergenic | 55.0% | |
| GAGCCTGTAGCAGATGCTCA+AGG | + | chr1.1:6032489-6032508 | None:intergenic | 55.0% | |
| GATAGGTGGAAGTGGGAAGG+AGG | - | chr1.1:6033333-6033352 | MS.gene33010:intron | 55.0% | |
| GCAGAATCAGACTGAGGACC+TGG | + | chr1.1:6031133-6031152 | None:intergenic | 55.0% | |
| GGCGGTACCCTTTCTTGGTA+AGG | - | chr1.1:6035132-6035151 | MS.gene33010:CDS | 55.0% | |
| GGTCCTCAGTCTGATTCTGC+TGG | - | chr1.1:6031133-6031152 | MS.gene33010:CDS | 55.0% | |
| GTCGGTTGGAGGCAAAAGAG+GGG | - | chr1.1:6033472-6033491 | MS.gene33010:intron | 55.0% | |
| TACACCAGAGCCAAGCTCCT+CGG | + | chr1.1:6032744-6032763 | None:intergenic | 55.0% | |
| TGGCGAGGGGGAATTGGATA+AGG | - | chr1.1:6033229-6033248 | MS.gene33010:intron | 55.0% | |
| TGGTAGGCTGCTTAGTTGGC+AGG | - | chr1.1:6032605-6032624 | MS.gene33010:intron | 55.0% | |
| TTCTCCTTCTCCGAGGAGCT+TGG | - | chr1.1:6032731-6032750 | MS.gene33010:intron | 55.0% | |
| ! | AATGGTTGTAGTGGGGGTGG+GGG | - | chr1.1:6033183-6033202 | MS.gene33010:intron | 55.0% |
| ! | GAGATGGCGGTACCCTTTCT+TGG | - | chr1.1:6035127-6035146 | MS.gene33010:CDS | 55.0% |
| ! | GAGCACATTTTCTGCCCAGC+TGG | - | chr1.1:6034460-6034479 | MS.gene33010:intron | 55.0% |
| !! | CTGGTCTTGTCAGGAAAGGG+AGG | - | chr1.1:6034428-6034447 | MS.gene33010:intron | 55.0% |
| !! | GAAGAGTACCAACCAGGGTC+AGG | + | chr1.1:6031220-6031239 | None:intergenic | 55.0% |
| !! | GATTTGAGATGGGCTGGGAC+AGG | + | chr1.1:6034952-6034971 | None:intergenic | 55.0% |
| !! | GGAAGTGGAGTGGGCTAAAG+AGG | - | chr1.1:6033421-6033440 | MS.gene33010:intron | 55.0% |
| AGAGCCAAGCTCCTCGGAGA+AGG | + | chr1.1:6032738-6032757 | None:intergenic | 60.0% | |
| GCTCCTAAAGGACCTGACCC+TGG | - | chr1.1:6031205-6031224 | MS.gene33010:CDS | 60.0% | |
| TCGGCTGCCTTGCAAAGCTG+TGG | + | chr1.1:6035169-6035188 | None:intergenic | 60.0% | |
| TTCTCCGAGGAGCTTGGCTC+TGG | - | chr1.1:6032737-6032756 | MS.gene33010:intron | 60.0% | |
| ! | ATGGTTGTAGTGGGGGTGGG+GGG | - | chr1.1:6033184-6033203 | MS.gene33010:intron | 60.0% |
| ! | TGGTTGTAGTGGGGGTGGGG+GGG | - | chr1.1:6033185-6033204 | MS.gene33010:intron | 65.0% |
| GGGGGATGGCGAGGGGGAAT+TGG | - | chr1.1:6033223-6033242 | MS.gene33010:intron | 70.0% | |
| ! | GGTTGTAGTGGGGGTGGGGG+GGG | - | chr1.1:6033186-6033205 | MS.gene33010:intron | 70.0% |
| ! | GTTGTAGTGGGGGTGGGGGG+GGG | - | chr1.1:6033187-6033206 | MS.gene33010:intron | 70.0% |
| ! | TTGTAGTGGGGGTGGGGGGG+GGG | - | chr1.1:6033188-6033207 | MS.gene33010:intron | 70.0% |
| ! | TGTAGTGGGGGTGGGGGGGG+GGG | - | chr1.1:6033189-6033208 | MS.gene33010:intron | 75.0% |
| ! | TAGTGGGGGTGGGGGGGGGG+GGG | - | chr1.1:6033191-6033210 | MS.gene33010:intron | 80.0% |
| !! | GTAGTGGGGGTGGGGGGGGG+GGG | - | chr1.1:6033190-6033209 | MS.gene33010:intron | 80.0% |
| ! | AGTGGGGGTGGGGGGGGGGG+GGG | - | chr1.1:6033192-6033211 | MS.gene33010:intron | 85.0% |
| ! | GGGGGGGGGGGATGGCGAGG+GGG | - | chr1.1:6033217-6033236 | MS.gene33010:intron | 85.0% |
| ! | GGGGGGGGGGGGATGGCGAG+GGG | - | chr1.1:6033216-6033235 | MS.gene33010:intron | 85.0% |
| ! | GGGGGGGGGGGGGATGGCGA+GGG | - | chr1.1:6033215-6033234 | MS.gene33010:intron | 85.0% |
| ! | GGGGGGGGGGGGGGATGGCG+AGG | - | chr1.1:6033214-6033233 | MS.gene33010:intron | 90.0% |
| ! | GTGGGGGTGGGGGGGGGGGG+GGG | - | chr1.1:6033193-6033212 | MS.gene33010:intron | 90.0% |
| ! | TGGGGGTGGGGGGGGGGGGG+GGG | - | chr1.1:6033194-6033213 | MS.gene33010:intron | 90.0% |
| ! | GGGGGGGGGGGGGGGGGGGA+TGG | - | chr1.1:6033209-6033228 | MS.gene33010:intron | 95.0% |
| ! | GGGGGTGGGGGGGGGGGGGG+GGG | - | chr1.1:6033195-6033214 | MS.gene33010:intron | 95.0% |
| ! | GGGGTGGGGGGGGGGGGGGG+GGG | - | chr1.1:6033196-6033215 | MS.gene33010:intron | 95.0% |
| ! | GGGTGGGGGGGGGGGGGGGG+GGG | - | chr1.1:6033197-6033216 | MS.gene33010:intron | 95.0% |
| ! | GGTGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:6033198-6033217 | MS.gene33010:intron | 95.0% |
| ! | GTGGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:6033199-6033218 | MS.gene33010:intron | 95.0% |
| ! | TGGGGGGGGGGGGGGGGGGG+GGG | - | chr1.1:6033200-6033219 | MS.gene33010:intron | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 6030979 | 6035309 | 6030979 | ID=MS.gene33010 |
| chr1.1 | mRNA | 6030979 | 6035309 | 6030979 | ID=MS.gene33010.t1;Parent=MS.gene33010 |
| chr1.1 | exon | 6035270 | 6035309 | 6035270 | ID=MS.gene33010.t1.exon1;Parent=MS.gene33010.t1 |
| chr1.1 | CDS | 6035270 | 6035309 | 6035270 | ID=cds.MS.gene33010.t1;Parent=MS.gene33010.t1 |
| chr1.1 | exon | 6035062 | 6035163 | 6035062 | ID=MS.gene33010.t1.exon2;Parent=MS.gene33010.t1 |
| chr1.1 | CDS | 6035062 | 6035163 | 6035062 | ID=cds.MS.gene33010.t1;Parent=MS.gene33010.t1 |
| chr1.1 | exon | 6030979 | 6031907 | 6030979 | ID=MS.gene33010.t1.exon3;Parent=MS.gene33010.t1 |
| chr1.1 | CDS | 6030979 | 6031907 | 6030979 | ID=cds.MS.gene33010.t1;Parent=MS.gene33010.t1 |
| Gene Sequence |
| Protein sequence |
