Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33398.t1 | XP_024637533.1 | 97.4 | 540 | 11 | 1 | 1 | 537 | 1 | 540 | 9.90E-293 | 1015.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33398.t1 | Q9CA89 | 63.9 | 552 | 147 | 12 | 1 | 537 | 1 | 515 | 1.3e-176 | 620.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33398.t1 | A0A396I1E5 | 97.4 | 540 | 11 | 1 | 1 | 537 | 1 | 540 | 7.1e-293 | 1015.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene043004 | MS.gene33398 | PPI |
| MS.gene33398 | MS.gene059632 | PPI |
| MS.gene61338 | MS.gene33398 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33398.t1 | MTR_2g101830 | 75.229 | 545 | 115 | 7 | 1 | 537 | 1 | 533 | 0.0 | 815 |
| MS.gene33398.t1 | MTR_4g013165 | 97.750 | 400 | 6 | 1 | 141 | 537 | 1 | 400 | 0.0 | 809 |
| MS.gene33398.t1 | MTR_6g087700 | 57.194 | 563 | 201 | 14 | 1 | 537 | 1 | 549 | 0.0 | 585 |
| MS.gene33398.t1 | MTR_7g065220 | 50.704 | 426 | 178 | 6 | 75 | 469 | 167 | 591 | 4.76e-145 | 432 |
| MS.gene33398.t1 | MTR_4g075640 | 56.164 | 365 | 138 | 6 | 88 | 431 | 85 | 448 | 2.92e-140 | 417 |
| MS.gene33398.t1 | MTR_4g019770 | 52.732 | 366 | 153 | 4 | 90 | 436 | 96 | 460 | 1.49e-134 | 401 |
| MS.gene33398.t1 | MTR_3g069590 | 49.869 | 383 | 161 | 6 | 88 | 440 | 98 | 479 | 1.35e-132 | 398 |
| MS.gene33398.t1 | MTR_5g081410 | 51.359 | 368 | 155 | 5 | 92 | 436 | 84 | 450 | 3.68e-129 | 389 |
| MS.gene33398.t1 | MTR_8g030850 | 48.942 | 378 | 164 | 5 | 87 | 436 | 94 | 470 | 6.21e-126 | 377 |
| MS.gene33398.t1 | MTR_3g069590 | 50.448 | 335 | 142 | 5 | 88 | 399 | 98 | 431 | 1.81e-116 | 351 |
| MS.gene33398.t1 | MTR_7g077690 | 44.258 | 418 | 161 | 6 | 90 | 436 | 113 | 529 | 2.84e-114 | 349 |
| MS.gene33398.t1 | MTR_5g025960 | 45.352 | 355 | 180 | 5 | 90 | 431 | 118 | 471 | 8.78e-103 | 320 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33398.t1 | AT1G79860 | 65.328 | 548 | 146 | 14 | 1 | 537 | 1 | 515 | 0.0 | 661 |
| MS.gene33398.t1 | AT1G52240 | 60.469 | 554 | 190 | 9 | 1 | 537 | 1 | 542 | 0.0 | 622 |
| MS.gene33398.t1 | AT3G24620 | 56.216 | 555 | 193 | 12 | 1 | 537 | 1 | 523 | 0.0 | 573 |
| MS.gene33398.t1 | AT4G13240 | 54.851 | 536 | 194 | 8 | 17 | 537 | 15 | 517 | 0.0 | 565 |
| MS.gene33398.t1 | AT3G16130 | 50.543 | 552 | 238 | 9 | 1 | 535 | 1 | 534 | 2.65e-176 | 508 |
| MS.gene33398.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 34 | 493 | 5.53e-174 | 500 |
| MS.gene33398.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 34 | 493 | 5.53e-174 | 500 |
| MS.gene33398.t1 | AT5G19560 | 55.675 | 467 | 191 | 5 | 80 | 537 | 53 | 512 | 1.37e-173 | 500 |
| MS.gene33398.t1 | AT5G19560 | 55.309 | 405 | 148 | 7 | 1 | 399 | 1 | 378 | 3.22e-146 | 425 |
| MS.gene33398.t1 | AT5G02010 | 52.033 | 369 | 156 | 5 | 88 | 436 | 68 | 435 | 4.08e-138 | 411 |
| MS.gene33398.t1 | AT4G38430 | 53.552 | 366 | 147 | 6 | 88 | 431 | 88 | 452 | 2.21e-134 | 401 |
| MS.gene33398.t1 | AT5G19560 | 54.645 | 366 | 150 | 5 | 181 | 537 | 5 | 363 | 6.17e-128 | 378 |
| MS.gene33398.t1 | AT5G05940 | 49.868 | 379 | 164 | 5 | 82 | 435 | 94 | 471 | 6.81e-128 | 387 |
| MS.gene33398.t1 | AT3G55660 | 50.693 | 361 | 155 | 5 | 90 | 428 | 107 | 466 | 1.65e-125 | 379 |
| MS.gene33398.t1 | AT4G00460 | 50.137 | 365 | 157 | 6 | 90 | 431 | 104 | 466 | 4.50e-125 | 375 |
| MS.gene33398.t1 | AT4G00460 | 50.137 | 365 | 157 | 6 | 90 | 431 | 104 | 466 | 4.50e-125 | 375 |
| MS.gene33398.t1 | AT1G01700 | 48.352 | 364 | 165 | 4 | 90 | 431 | 116 | 478 | 6.00e-120 | 362 |
| MS.gene33398.t1 | AT2G45890 | 47.185 | 373 | 166 | 6 | 90 | 436 | 93 | 460 | 1.95e-118 | 357 |
| MS.gene33398.t1 | AT1G01700 | 44.670 | 394 | 165 | 5 | 90 | 431 | 116 | 508 | 1.48e-113 | 347 |
| MS.gene33398.t1 | AT5G05940 | 48.077 | 364 | 163 | 5 | 61 | 399 | 73 | 435 | 4.59e-113 | 345 |
| MS.gene33398.t1 | AT3G55660 | 49.699 | 332 | 144 | 5 | 90 | 399 | 107 | 437 | 1.05e-111 | 339 |
| MS.gene33398.t1 | AT4G00460 | 47.130 | 331 | 150 | 6 | 124 | 431 | 5 | 333 | 1.64e-103 | 315 |
| MS.gene33398.t1 | AT1G01700 | 45.748 | 341 | 155 | 5 | 90 | 401 | 116 | 455 | 1.28e-100 | 311 |
| MS.gene33398.t1 | AT1G31650 | 41.688 | 391 | 199 | 8 | 90 | 464 | 108 | 485 | 5.94e-99 | 310 |
| MS.gene33398.t1 | AT1G31650 | 41.688 | 391 | 199 | 8 | 90 | 464 | 136 | 513 | 1.37e-98 | 310 |
| MS.gene33398.t1 | AT4G00460 | 52.074 | 217 | 89 | 3 | 90 | 292 | 104 | 319 | 1.38e-73 | 237 |
| MS.gene33398.t1 | AT1G01700 | 49.309 | 217 | 95 | 2 | 90 | 292 | 116 | 331 | 1.20e-69 | 228 |
| MS.gene33398.t1 | AT1G01700 | 49.309 | 217 | 95 | 2 | 90 | 292 | 116 | 331 | 1.20e-69 | 228 |
Find 110 sgRNAs with CRISPR-Local
Find 203 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCCATCTTGCTTTCCTTTC+CGG | 0.078322 | 4.2:+87718897 | None:intergenic |
| TAGCTTCTCTTTGGCTTCTT+TGG | 0.168978 | 4.2:+87719587 | None:intergenic |
| ACCCTTTCAGAATCATTTAA+AGG | 0.183778 | 4.2:+87719651 | None:intergenic |
| TTCAAGAATATTGGAAAGTT+TGG | 0.229165 | 4.2:-87717139 | MS.gene33398:CDS |
| TGAAAGCTATTCAAGAATAT+TGG | 0.237962 | 4.2:-87717148 | MS.gene33398:CDS |
| TCCTCTGAAATTGAATAGTT+TGG | 0.241404 | 4.2:+87719785 | None:intergenic |
| AAACCTTCTGCAGGTACTTT+AGG | 0.242838 | 4.2:+87718202 | None:intergenic |
| CACTTGTCTGGCTTTGGAAC+TGG | 0.249997 | 4.2:+87717024 | None:intergenic |
| GTCACTATGGGTTGAAGTTT+TGG | 0.251808 | 4.2:+87716838 | None:intergenic |
| CGCTTTCTTATCAGTCACTA+TGG | 0.271679 | 4.2:+87716825 | None:intergenic |
| GAGATTTGCTAAACTACTAT+TGG | 0.292387 | 4.2:-87719187 | MS.gene33398:CDS |
| CTCTTGAAACATCGGTTTCC+CGG | 0.303473 | 4.2:-87717440 | MS.gene33398:CDS |
| TTTCGCTGTTTCAGATGATT+TGG | 0.310878 | 4.2:-87716887 | MS.gene33398:CDS |
| AGGGATTCAATATAGCTTTC+AGG | 0.311443 | 4.2:+87718073 | None:intergenic |
| CTTGGAGTTGGACACTTGTC+TGG | 0.318966 | 4.2:+87717012 | None:intergenic |
| AGCAGAACCCCATGCTGATT+TGG | 0.319621 | 4.2:+87717517 | None:intergenic |
| GTTGGACACTTGTCTGGCTT+TGG | 0.325094 | 4.2:+87717018 | None:intergenic |
| CGGACTTCCACAATCTTCAT+TGG | 0.333257 | 4.2:-87717420 | MS.gene33398:CDS |
| AGAAATTGATTGGCTTCTTT+CGG | 0.336102 | 4.2:-87718871 | MS.gene33398:CDS |
| ATATTCTTACCCGGTTGAAT+TGG | 0.342935 | 4.2:+87717384 | None:intergenic |
| ACCTTGTAATAGCTTCTCTT+TGG | 0.346571 | 4.2:+87719578 | None:intergenic |
| AGATTTGCTAAACTACTATT+GGG | 0.358169 | 4.2:-87719186 | MS.gene33398:CDS |
| CTGCTTCTTCTTCCTTGAGT+TGG | 0.362852 | 4.2:+87717057 | None:intergenic |
| GATGACACTATCGGATTTCA+TGG | 0.363592 | 4.2:-87716953 | MS.gene33398:CDS |
| GATGGAGAAAAGAAATTGAT+TGG | 0.363929 | 4.2:-87718881 | MS.gene33398:CDS |
| CACCGATTACGTTGTTGAAA+TGG | 0.368043 | 4.2:-87718847 | MS.gene33398:CDS |
| TTGAGGCATCAATAGTGATT+TGG | 0.369420 | 4.2:-87717565 | MS.gene33398:CDS |
| AAAAGGTGTTTCTTCAGCTT+TGG | 0.377971 | 4.2:-87719142 | MS.gene33398:CDS |
| AACCATTTCAACAACGTAAT+CGG | 0.380996 | 4.2:+87718845 | None:intergenic |
| TTTCCGGTGGCATTGGCTCT+AGG | 0.384702 | 4.2:+87718913 | None:intergenic |
| AAGCTGAATCGTTCATTAGA+AGG | 0.387113 | 4.2:-87716915 | MS.gene33398:CDS |
| TCCTTGGATTTCTGCTGTGT+TGG | 0.392723 | 4.2:+87718822 | None:intergenic |
| ATGGGGTTCTGCTGTGAGTT+TGG | 0.395399 | 4.2:-87717507 | MS.gene33398:CDS |
| CTCCATGGTTGAACCATCCT+TGG | 0.395990 | 4.2:+87718806 | None:intergenic |
| TGCACAAACTCTATCGGAAA+TGG | 0.400943 | 4.2:-87718101 | MS.gene33398:CDS |
| AAAATTCATCGGTAATATTC+CGG | 0.401528 | 4.2:+87717660 | None:intergenic |
| TAAGCAAAATCCAATTCAAC+CGG | 0.402717 | 4.2:-87717394 | MS.gene33398:CDS |
| GCTTTCCTTTCCGGTGGCAT+TGG | 0.405690 | 4.2:+87718906 | None:intergenic |
| GCGTCCTACGTTGAAAATAT+AGG | 0.413983 | 4.2:-87716805 | MS.gene33398:CDS |
| TATTTATTATGGCAGGATGT+AGG | 0.423799 | 4.2:-87717183 | MS.gene33398:intron |
| AGAGGAATGTTTGAGAATAC+AGG | 0.429946 | 4.2:-87719768 | MS.gene33398:CDS |
| CAATGAAGATTGTGGAAGTC+CGG | 0.433059 | 4.2:+87717421 | None:intergenic |
| ATTTATTATGGCAGGATGTA+GGG | 0.436823 | 4.2:-87717182 | MS.gene33398:intron |
| AATGCATTAACAAATCTTGC+TGG | 0.438177 | 4.2:-87719111 | MS.gene33398:intron |
| TCACTTCTGTCTACATCTCT+TGG | 0.450269 | 4.2:+87716994 | None:intergenic |
| GTATCAAGCTTTCTCAAGGC+AGG | 0.451607 | 4.2:+87718651 | None:intergenic |
| GATATGTCTGGTGGAGGAAA+AGG | 0.452382 | 4.2:-87719159 | MS.gene33398:CDS |
| TTCGATCCCGATCAGTTCCT+AGG | 0.458208 | 4.2:-87717638 | MS.gene33398:CDS |
| CCTTGACTTCTTGATGAAGC+AGG | 0.459530 | 4.2:+87719681 | None:intergenic |
| ACCTTTAAATGATTCTGAAA+GGG | 0.465239 | 4.2:-87719652 | MS.gene33398:CDS |
| TTCAGAAATGGAACAGATGA+AGG | 0.477101 | 4.2:-87719211 | MS.gene33398:intron |
| AACCTTTAAATGATTCTGAA+AGG | 0.479697 | 4.2:-87719653 | MS.gene33398:CDS |
| CACTATCGGATTTCATGGGT+TGG | 0.504092 | 4.2:-87716948 | MS.gene33398:CDS |
| ATGTTTCAAGAGAAGTAAGA+TGG | 0.504617 | 4.2:+87717451 | None:intergenic |
| CTTATATCCAATGAAGATTG+TGG | 0.506045 | 4.2:+87717413 | None:intergenic |
| CTGTCTACATCTCTTGGAGT+TGG | 0.509157 | 4.2:+87717000 | None:intergenic |
| AATAATCAATGGCGTGATGT+TGG | 0.515072 | 4.2:+87716769 | None:intergenic |
| AGGCATCAATAGTGATTTGG+AGG | 0.517145 | 4.2:-87717562 | MS.gene33398:CDS |
| TGACAAATCAAGAACAATCA+AGG | 0.524014 | 4.2:-87719622 | MS.gene33398:CDS |
| TATAAATGCACAAACTCTAT+CGG | 0.524554 | 4.2:-87718107 | MS.gene33398:CDS |
| TACTCTTGATAGCACTGTAA+AGG | 0.525700 | 4.2:+87717116 | None:intergenic |
| GCAGGATCATCTTCAGAAGT+AGG | 0.529193 | 4.2:+87719699 | None:intergenic |
| AATGAAGATTGTGGAAGTCC+GGG | 0.535167 | 4.2:+87717422 | None:intergenic |
| GCTTTCTTATCAGTCACTAT+GGG | 0.535643 | 4.2:+87716826 | None:intergenic |
| AAAGATGCTGATGATCCAAA+AGG | 0.536136 | 4.2:-87718256 | MS.gene33398:CDS |
| AAAAGATTCCAAATCAGCAT+GGG | 0.538216 | 4.2:-87717525 | MS.gene33398:CDS |
| GCGCCTAGAGCCAATGCCAC+CGG | 0.540190 | 4.2:-87718916 | MS.gene33398:CDS |
| TCGATCCCGATCAGTTCCTA+GGG | 0.545956 | 4.2:-87717637 | MS.gene33398:CDS |
| TTTGTGTTTGGGAATCTGCA+TGG | 0.548213 | 4.2:+87717082 | None:intergenic |
| ATACATAGTAGAATTCACTT+TGG | 0.548661 | 4.2:+87718281 | None:intergenic |
| AGCTGAATCGTTCATTAGAA+GGG | 0.550005 | 4.2:-87716914 | MS.gene33398:CDS |
| TGATCTCAAGAATAGAATTG+AGG | 0.555196 | 4.2:-87717582 | MS.gene33398:CDS |
| ATTGTCCCTAGGAACTGATC+GGG | 0.557717 | 4.2:+87717632 | None:intergenic |
| TCCAAACTATTCAATTTCAG+AGG | 0.558140 | 4.2:-87719786 | MS.gene33398:CDS |
| GTCTAGGAGACATAATCTAC+CGG | 0.562132 | 4.2:-87717679 | MS.gene33398:CDS |
| ATGACACTATCGGATTTCAT+GGG | 0.566800 | 4.2:-87716952 | MS.gene33398:CDS |
| TCAAGTACTTAAAGCAGCAA+TGG | 0.567209 | 4.2:-87718131 | MS.gene33398:CDS |
| GGGGAAGATATGTCTGGTGG+AGG | 0.568650 | 4.2:-87719165 | MS.gene33398:CDS |
| TATTGTCCCTAGGAACTGAT+CGG | 0.570239 | 4.2:+87717631 | None:intergenic |
| ATGACATGTCTATTGTCCCT+AGG | 0.570387 | 4.2:+87717621 | None:intergenic |
| CATCTTGCTTTCCTTTCCGG+TGG | 0.571860 | 4.2:+87718900 | None:intergenic |
| CACCGGAAAGGAAAGCAAGA+TGG | 0.574325 | 4.2:-87718899 | MS.gene33398:CDS |
| GCCAAAGAGAAGCTATTACA+AGG | 0.575015 | 4.2:-87719579 | MS.gene33398:intron |
| TCTTACTTCTCTTGAAACAT+CGG | 0.576704 | 4.2:-87717448 | MS.gene33398:CDS |
| GCTTCAGATAAACCTTCTGC+AGG | 0.580248 | 4.2:+87718193 | None:intergenic |
| CAGAATGGAAGAGCAAGTCT+AGG | 0.580694 | 4.2:-87717695 | MS.gene33398:CDS |
| CATTGTATCAAGCTTTCTCA+AGG | 0.582888 | 4.2:+87718647 | None:intergenic |
| CTATATTGAATCCCTACCTA+AGG | 0.582995 | 4.2:-87718065 | MS.gene33398:intron |
| CCTGCTTCATCAAGAAGTCA+AGG | 0.585571 | 4.2:-87719681 | MS.gene33398:CDS |
| GATTTGCTAAACTACTATTG+GGG | 0.587710 | 4.2:-87719185 | MS.gene33398:CDS |
| TATCAAGCTTTCTCAAGGCA+GGG | 0.597091 | 4.2:+87718652 | None:intergenic |
| TAGAGCCAATGCCACCGGAA+AGG | 0.597760 | 4.2:-87718911 | MS.gene33398:CDS |
| CAAACACAAAATCCAACTCA+AGG | 0.607976 | 4.2:-87717069 | MS.gene33398:CDS |
| CATCAATAGTGATTTGGAGG+AGG | 0.609738 | 4.2:-87717559 | MS.gene33398:CDS |
| TCCTACGTTGAAAATATAGG+AGG | 0.610840 | 4.2:-87716802 | MS.gene33398:CDS |
| TCTGCAGGTACTTTAGGTGT+AGG | 0.611224 | 4.2:+87718208 | None:intergenic |
| TCAAGGCAGGGATGTTCATG+TGG | 0.611859 | 4.2:+87718664 | None:intergenic |
| TCCGATAGTGTCATCGAACA+AGG | 0.615667 | 4.2:+87716961 | None:intergenic |
| ACCTTGTTCGATGACACTAT+CGG | 0.617580 | 4.2:-87716962 | MS.gene33398:CDS |
| ATCCAAGGATGGTTCAACCA+TGG | 0.634394 | 4.2:-87718808 | MS.gene33398:CDS |
| ACACCTAAAGTACCTGCAGA+AGG | 0.643111 | 4.2:-87718205 | MS.gene33398:CDS |
| TCCAACACAGCAGAAATCCA+AGG | 0.654054 | 4.2:-87718823 | MS.gene33398:CDS |
| ATTTGCTAAACTACTATTGG+GGG | 0.655936 | 4.2:-87719184 | MS.gene33398:CDS |
| ACACAGCAGAAATCCAAGGA+TGG | 0.657465 | 4.2:-87718819 | MS.gene33398:CDS |
| AAATCATCTGAAACAGCGAA+AGG | 0.660205 | 4.2:+87716889 | None:intergenic |
| AAGCAAAATCCAATTCAACC+GGG | 0.681075 | 4.2:-87717393 | MS.gene33398:intron |
| CAAGGATGGTTCAACCATGG+AGG | 0.685494 | 4.2:-87718805 | MS.gene33398:intron |
| AAAGATTCCAAATCAGCATG+GGG | 0.687868 | 4.2:-87717524 | MS.gene33398:CDS |
| AGATGTAGACAGAAGTGACG+CGG | 0.707081 | 4.2:-87716989 | MS.gene33398:CDS |
| CAAATCAAGAACAATCAAGG+AGG | 0.708483 | 4.2:-87719619 | MS.gene33398:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAATATAACAAGTATTAT+CGG | - | chr4.2:87719313-87719332 | MS.gene33398:intron | 10.0% |
| !!! | TCTATAAATTTTGATATTTA+TGG | - | chr4.2:87717355-87717374 | MS.gene33398:intron | 10.0% |
| !! | CTAACAAGTATTATTTATTA+TGG | - | chr4.2:87719405-87719424 | MS.gene33398:intron | 15.0% |
| !! | TAAATATGATCATTATATGT+TGG | - | chr4.2:87718002-87718021 | MS.gene33398:intron | 15.0% |
| !! | TGAAAGAAAACAAAAATTTA+AGG | + | chr4.2:87718877-87718896 | None:intergenic | 15.0% |
| !!! | ATTTCAATATACATTCTTTT+TGG | - | chr4.2:87717066-87717085 | MS.gene33398:CDS | 15.0% |
| !!! | TAAATTTTGATATTTATGGT+TGG | - | chr4.2:87717359-87717378 | MS.gene33398:intron | 15.0% |
| !!! | TTTGTTTGTGTTTTATTAAT+AGG | - | chr4.2:87719358-87719377 | MS.gene33398:intron | 15.0% |
| !! | ATAACTATTAACATGCATAA+GGG | - | chr4.2:87717285-87717304 | MS.gene33398:intron | 20.0% |
| !! | ATAATGATCATATTTAACTC+AGG | + | chr4.2:87717998-87718017 | None:intergenic | 20.0% |
| !! | TATAACTATTAACATGCATA+AGG | - | chr4.2:87717284-87717303 | MS.gene33398:intron | 20.0% |
| !!! | ACAAAAACTGTAAGTTTTAT+AGG | - | chr4.2:87718186-87718205 | MS.gene33398:CDS | 20.0% |
| !!! | ATCAATTTCATGCATTTTAT+TGG | - | chr4.2:87717323-87717342 | MS.gene33398:intron | 20.0% |
| !!! | GCTTATTTTAGTTTATCTAT+TGG | - | chr4.2:87718590-87718609 | MS.gene33398:intron | 20.0% |
| !!! | TCAATTTCATGCATTTTATT+GGG | - | chr4.2:87717324-87717343 | MS.gene33398:intron | 20.0% |
| !!! | TTAATCCTGATTTGTTATAT+AGG | - | chr4.2:87718222-87718241 | MS.gene33398:CDS | 20.0% |
| !!! | TTTGTTATATAGGATTCAAT+TGG | - | chr4.2:87718232-87718251 | MS.gene33398:CDS | 20.0% |
| ! | AAAATTCATCGGTAATATTC+CGG | + | chr4.2:87718942-87718961 | None:intergenic | 25.0% |
| ! | AACCTTTAAATGATTCTGAA+AGG | - | chr4.2:87716946-87716965 | MS.gene33398:CDS | 25.0% |
| ! | AATGTGATGAACTAAACATA+TGG | + | chr4.2:87717848-87717867 | None:intergenic | 25.0% |
| ! | AGGTGATTGAAATTCATTTA+CGG | - | chr4.2:87717134-87717153 | MS.gene33398:CDS | 25.0% |
| ! | ATACATAGTAGAATTCACTT+TGG | + | chr4.2:87718321-87718340 | None:intergenic | 25.0% |
| ! | ATGTGATGAACTAAACATAT+GGG | + | chr4.2:87717847-87717866 | None:intergenic | 25.0% |
| ! | CAAGTATTATTTATTATGGC+AGG | - | chr4.2:87719409-87719428 | MS.gene33398:intron | 25.0% |
| ! | TAACTATTAACATGCATAAG+GGG | - | chr4.2:87717286-87717305 | MS.gene33398:intron | 25.0% |
| ! | TATAAATGCACAAACTCTAT+CGG | - | chr4.2:87718492-87718511 | MS.gene33398:intron | 25.0% |
| ! | TGAAAGCTATTCAAGAATAT+TGG | - | chr4.2:87719451-87719470 | MS.gene33398:intron | 25.0% |
| ! | TGAATCCTATATAACAAATC+AGG | + | chr4.2:87718230-87718249 | None:intergenic | 25.0% |
| ! | TTCAAGAATATTGGAAAGTT+TGG | - | chr4.2:87719460-87719479 | MS.gene33398:intron | 25.0% |
| !! | ACCTTTAAATGATTCTGAAA+GGG | - | chr4.2:87716947-87716966 | MS.gene33398:CDS | 25.0% |
| !! | TCTATACTTCAGAATTTTGA+TGG | - | chr4.2:87717558-87717577 | MS.gene33398:CDS | 25.0% |
| !! | TTTGAAACATTTCCTGAAAA+TGG | + | chr4.2:87717606-87717625 | None:intergenic | 25.0% |
| !!! | AGATTTGCTAAACTACTATT+GGG | - | chr4.2:87717413-87717432 | MS.gene33398:CDS | 25.0% |
| !!! | TGCTTTATTATTTTAGCTCA+AGG | + | chr4.2:87717533-87717552 | None:intergenic | 25.0% |
| !!! | TTGTCATCATTTTTTCCTTT+TGG | + | chr4.2:87718361-87718380 | None:intergenic | 25.0% |
| AAAAAGATTCCAAATCAGCA+TGG | - | chr4.2:87719073-87719092 | MS.gene33398:intron | 30.0% | |
| AAAAGATTCCAAATCAGCAT+GGG | - | chr4.2:87719074-87719093 | MS.gene33398:intron | 30.0% | |
| AAACATTTCCTGAAAATGGA+AGG | + | chr4.2:87717602-87717621 | None:intergenic | 30.0% | |
| AACCATTTCAACAACGTAAT+CGG | + | chr4.2:87717757-87717776 | None:intergenic | 30.0% | |
| AAGGAAAAAATGATGACAAG+TGG | - | chr4.2:87718362-87718381 | MS.gene33398:intron | 30.0% | |
| AATGCATTAACAAATCTTGC+TGG | - | chr4.2:87717488-87717507 | MS.gene33398:CDS | 30.0% | |
| ACCCTTTCAGAATCATTTAA+AGG | + | chr4.2:87716951-87716970 | None:intergenic | 30.0% | |
| ATAGCTTCTAAGCAAATACA+AGG | + | chr4.2:87718818-87718837 | None:intergenic | 30.0% | |
| ATGTTTCAAGAGAAGTAAGA+TGG | + | chr4.2:87719151-87719170 | None:intergenic | 30.0% | |
| ATTTATTATGGCAGGATGTA+GGG | - | chr4.2:87719417-87719436 | MS.gene33398:intron | 30.0% | |
| CAGGGACTAAAAACAAAATT+CGG | + | chr4.2:87718059-87718078 | None:intergenic | 30.0% | |
| CTTATATCCAATGAAGATTG+TGG | + | chr4.2:87719189-87719208 | None:intergenic | 30.0% | |
| GATGGAGAAAAGAAATTGAT+TGG | - | chr4.2:87717718-87717737 | MS.gene33398:intron | 30.0% | |
| GGTTGGATTAAATTCAGAAA+TGG | - | chr4.2:87717376-87717395 | MS.gene33398:intron | 30.0% | |
| TAAGCAAAATCCAATTCAAC+CGG | - | chr4.2:87719205-87719224 | MS.gene33398:CDS | 30.0% | |
| TATTTATTATGGCAGGATGT+AGG | - | chr4.2:87719416-87719435 | MS.gene33398:intron | 30.0% | |
| TATTTGCTTAGAAGCTATGT+TGG | - | chr4.2:87718820-87718839 | MS.gene33398:CDS | 30.0% | |
| TCCAAACTATTCAATTTCAG+AGG | - | chr4.2:87716813-87716832 | MS.gene33398:CDS | 30.0% | |
| TCTTACTTCTCTTGAAACAT+CGG | - | chr4.2:87719151-87719170 | MS.gene33398:CDS | 30.0% | |
| TGACAAATCAAGAACAATCA+AGG | - | chr4.2:87716977-87716996 | MS.gene33398:CDS | 30.0% | |
| TGATCTCAAGAATAGAATTG+AGG | - | chr4.2:87719017-87719036 | MS.gene33398:intron | 30.0% | |
| TGTGATGAACTAAACATATG+GGG | + | chr4.2:87717846-87717865 | None:intergenic | 30.0% | |
| TTCTTTCATCATTCACAGAA+TGG | - | chr4.2:87718889-87718908 | MS.gene33398:CDS | 30.0% | |
| ! | ATTAAGTTGTTTGTACAACC+AGG | - | chr4.2:87718789-87718808 | MS.gene33398:intron | 30.0% |
| ! | ATTTGCTAAACTACTATTGG+GGG | - | chr4.2:87717415-87717434 | MS.gene33398:CDS | 30.0% |
| ! | CACAATGTTGCATAAACTTT+TGG | - | chr4.2:87719266-87719285 | MS.gene33398:intron | 30.0% |
| ! | GTTTCTTTTTGACATACCTT+AGG | + | chr4.2:87718553-87718572 | None:intergenic | 30.0% |
| ! | TTAAGTTGTTTGTACAACCA+GGG | - | chr4.2:87718790-87718809 | MS.gene33398:intron | 30.0% |
| ! | TTAATTTTTGCAGTTGTGCA+CGG | + | chr4.2:87717107-87717126 | None:intergenic | 30.0% |
| ! | TTATGATGATGATGATGATC+AGG | - | chr4.2:87718273-87718292 | MS.gene33398:CDS | 30.0% |
| ! | TTTTTGACATACCTTAGGTA+GGG | + | chr4.2:87718548-87718567 | None:intergenic | 30.0% |
| !! | AGAAATTGATTGGCTTCTTT+CGG | - | chr4.2:87717728-87717747 | MS.gene33398:intron | 30.0% |
| !! | GAGATTTGCTAAACTACTAT+TGG | - | chr4.2:87717412-87717431 | MS.gene33398:CDS | 30.0% |
| !! | GATTTGCTAAACTACTATTG+GGG | - | chr4.2:87717414-87717433 | MS.gene33398:CDS | 30.0% |
| !! | TCCTCTGAAATTGAATAGTT+TGG | + | chr4.2:87716817-87716836 | None:intergenic | 30.0% |
| !! | TGTGCAATTTTGTAACTTGT+GGG | + | chr4.2:87718097-87718116 | None:intergenic | 30.0% |
| !!! | AGGTTTTTTTTTTACCTCCA+TGG | + | chr4.2:87717811-87717830 | None:intergenic | 30.0% |
| !!! | ATGCTGATTTGGAATCTTTT+TGG | + | chr4.2:87719074-87719093 | None:intergenic | 30.0% |
| !!! | TTGAGTTGGATTTTGTGTTT+GGG | + | chr4.2:87719531-87719550 | None:intergenic | 30.0% |
| AAAGATGCTGATGATCCAAA+AGG | - | chr4.2:87718343-87718362 | MS.gene33398:intron | 35.0% | |
| AAAGATTCCAAATCAGCATG+GGG | - | chr4.2:87719075-87719094 | MS.gene33398:intron | 35.0% | |
| AAGCAAAATCCAATTCAACC+GGG | - | chr4.2:87719206-87719225 | MS.gene33398:CDS | 35.0% | |
| AAGCTGAATCGTTCATTAGA+AGG | - | chr4.2:87719684-87719703 | MS.gene33398:CDS | 35.0% | |
| ACCTTGTAATAGCTTCTCTT+TGG | + | chr4.2:87717024-87717043 | None:intergenic | 35.0% | |
| ACTCCTAACGAAATGGTTAA+GGG | - | chr4.2:87717208-87717227 | MS.gene33398:intron | 35.0% | |
| AGAGGAATGTTTGAGAATAC+AGG | - | chr4.2:87716831-87716850 | MS.gene33398:CDS | 35.0% | |
| AGCTCATTAAAGCAACTCAT+AGG | - | chr4.2:87718686-87718705 | MS.gene33398:CDS | 35.0% | |
| AGCTGAATCGTTCATTAGAA+GGG | - | chr4.2:87719685-87719704 | MS.gene33398:CDS | 35.0% | |
| AGGGATTCAATATAGCTTTC+AGG | + | chr4.2:87718529-87718548 | None:intergenic | 35.0% | |
| ATACAGGACATATTCTTACC+CGG | + | chr4.2:87719227-87719246 | None:intergenic | 35.0% | |
| ATATTCTTACCCGGTTGAAT+TGG | + | chr4.2:87719218-87719237 | None:intergenic | 35.0% | |
| ATCGGGATCGAAAAATTCAT+CGG | + | chr4.2:87718953-87718972 | None:intergenic | 35.0% | |
| ATGACACTATCGGATTTCAT+GGG | - | chr4.2:87719647-87719666 | MS.gene33398:CDS | 35.0% | |
| CAAACACAAAATCCAACTCA+AGG | - | chr4.2:87719530-87719549 | MS.gene33398:intron | 35.0% | |
| CAAATCAAGAACAATCAAGG+AGG | - | chr4.2:87716980-87716999 | MS.gene33398:CDS | 35.0% | |
| CATTGTATCAAGCTTTCTCA+AGG | + | chr4.2:87717955-87717974 | None:intergenic | 35.0% | |
| CTATATTGAATCCCTACCTA+AGG | - | chr4.2:87718534-87718553 | MS.gene33398:intron | 35.0% | |
| CTGCAAAAATTAATCTCTCG+AGG | - | chr4.2:87717114-87717133 | MS.gene33398:CDS | 35.0% | |
| GAAAAAATGATGACAAGTGG+TGG | - | chr4.2:87718365-87718384 | MS.gene33398:intron | 35.0% | |
| GCTTTCTTATCAGTCACTAT+GGG | + | chr4.2:87719776-87719795 | None:intergenic | 35.0% | |
| TCAAGTACTTAAAGCAGCAA+TGG | - | chr4.2:87718468-87718487 | MS.gene33398:intron | 35.0% | |
| TCCTACGTTGAAAATATAGG+AGG | - | chr4.2:87719797-87719816 | MS.gene33398:CDS | 35.0% | |
| TTCAGAAATGGAACAGATGA+AGG | - | chr4.2:87717388-87717407 | MS.gene33398:intron | 35.0% | |
| TTTCCCTTAACCATTTCGTT+AGG | + | chr4.2:87717214-87717233 | None:intergenic | 35.0% | |
| ! | AAATCATCTGAAACAGCGAA+AGG | + | chr4.2:87719713-87719732 | None:intergenic | 35.0% |
| ! | AAATGTTTTTCCATACGCAC+CGG | - | chr4.2:87717174-87717193 | MS.gene33398:intron | 35.0% |
| ! | ACCTCCTATATTTTCAACGT+AGG | + | chr4.2:87719801-87719820 | None:intergenic | 35.0% |
| ! | ATGGCGTTTTGTGGTTTTTA+CGG | - | chr4.2:87718136-87718155 | MS.gene33398:CDS | 35.0% |
| ! | CTTTTTGACATACCTTAGGT+AGG | + | chr4.2:87718549-87718568 | None:intergenic | 35.0% |
| ! | GGAAAAACATTTGGTGGTAA+AGG | + | chr4.2:87717166-87717185 | None:intergenic | 35.0% |
| ! | GTGTGCAATTTTGTAACTTG+TGG | + | chr4.2:87718098-87718117 | None:intergenic | 35.0% |
| ! | TAATTTTTGCAGTTGTGCAC+GGG | + | chr4.2:87717106-87717125 | None:intergenic | 35.0% |
| ! | TACTCTTGATAGCACTGTAA+AGG | + | chr4.2:87719486-87719505 | None:intergenic | 35.0% |
| ! | TTAACATGCATAAGGGGTTT+TGG | - | chr4.2:87717292-87717311 | MS.gene33398:intron | 35.0% |
| ! | TTGAGGCATCAATAGTGATT+TGG | - | chr4.2:87719034-87719053 | MS.gene33398:intron | 35.0% |
| ! | TTTCGCTGTTTCAGATGATT+TGG | - | chr4.2:87719712-87719731 | MS.gene33398:CDS | 35.0% |
| !! | AAAAGGTGTTTCTTCAGCTT+TGG | - | chr4.2:87717457-87717476 | MS.gene33398:CDS | 35.0% |
| !!! | ATTAATGCAGCTGCTGTTTT+CGG | - | chr4.2:87717651-87717670 | MS.gene33398:CDS | 35.0% |
| !!! | CTTGAGTTGGATTTTGTGTT+TGG | + | chr4.2:87719532-87719551 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCCTTCCATTTTC+AGG | - | chr4.2:87717591-87717610 | MS.gene33398:CDS | 35.0% |
| AAACCTTCTGCAGGTACTTT+AGG | + | chr4.2:87718400-87718419 | None:intergenic | 40.0% | |
| AACATATGGGGAGAACAAAG+AGG | + | chr4.2:87717834-87717853 | None:intergenic | 40.0% | |
| AATGAAGATTGTGGAAGTCC+GGG | + | chr4.2:87719180-87719199 | None:intergenic | 40.0% | |
| ACCTTGTTCGATGACACTAT+CGG | - | chr4.2:87719637-87719656 | MS.gene33398:CDS | 40.0% | |
| ATGACATGTCTATTGTCCCT+AGG | + | chr4.2:87718981-87719000 | None:intergenic | 40.0% | |
| CAATGAAGATTGTGGAAGTC+CGG | + | chr4.2:87719181-87719200 | None:intergenic | 40.0% | |
| CGCTTTCTTATCAGTCACTA+TGG | + | chr4.2:87719777-87719796 | None:intergenic | 40.0% | |
| GAAGAGATCAAGATGCATAC+AGG | + | chr4.2:87719243-87719262 | None:intergenic | 40.0% | |
| GACATGTCCACAAACTATCT+AGG | - | chr4.2:87718661-87718680 | MS.gene33398:CDS | 40.0% | |
| GACTCCTAACGAAATGGTTA+AGG | - | chr4.2:87717207-87717226 | MS.gene33398:intron | 40.0% | |
| GAGCTATCCTAGATAGTTTG+TGG | + | chr4.2:87718671-87718690 | None:intergenic | 40.0% | |
| GATGACACTATCGGATTTCA+TGG | - | chr4.2:87719646-87719665 | MS.gene33398:CDS | 40.0% | |
| GCCAAAGAGAAGCTATTACA+AGG | - | chr4.2:87717020-87717039 | MS.gene33398:CDS | 40.0% | |
| GCGTATGGAAAAACATTTGG+TGG | + | chr4.2:87717172-87717191 | None:intergenic | 40.0% | |
| GCGTCCTACGTTGAAAATAT+AGG | - | chr4.2:87719794-87719813 | MS.gene33398:CDS | 40.0% | |
| GGTGCGTATGGAAAAACATT+TGG | + | chr4.2:87717175-87717194 | None:intergenic | 40.0% | |
| GTCTAGGAGACATAATCTAC+CGG | - | chr4.2:87718920-87718939 | MS.gene33398:CDS | 40.0% | |
| TAAGCCAATTCGAACTGTCA+CGG | + | chr4.2:87718575-87718594 | None:intergenic | 40.0% | |
| TATCAAGCTTTCTCAAGGCA+GGG | + | chr4.2:87717950-87717969 | None:intergenic | 40.0% | |
| TATTGTCCCTAGGAACTGAT+CGG | + | chr4.2:87718971-87718990 | None:intergenic | 40.0% | |
| TCACTTCTGTCTACATCTCT+TGG | + | chr4.2:87719608-87719627 | None:intergenic | 40.0% | |
| TGCACAAACTCTATCGGAAA+TGG | - | chr4.2:87718498-87718517 | MS.gene33398:intron | 40.0% | |
| TTTGTGTTTGGGAATCTGCA+TGG | + | chr4.2:87719520-87719539 | None:intergenic | 40.0% | |
| ! | AATTTTTGCAGTTGTGCACG+GGG | + | chr4.2:87717105-87717124 | None:intergenic | 40.0% |
| ! | AGGCATCAATAGTGATTTGG+AGG | - | chr4.2:87719037-87719056 | MS.gene33398:intron | 40.0% |
| ! | CACCGATTACGTTGTTGAAA+TGG | - | chr4.2:87717752-87717771 | MS.gene33398:intron | 40.0% |
| ! | CATCAATAGTGATTTGGAGG+AGG | - | chr4.2:87719040-87719059 | MS.gene33398:intron | 40.0% |
| ! | TAGCTTCTCTTTGGCTTCTT+TGG | + | chr4.2:87717015-87717034 | None:intergenic | 40.0% |
| !! | GGTTTTTACGGACTAAGAAG+TGG | - | chr4.2:87718148-87718167 | MS.gene33398:CDS | 40.0% |
| !! | GTCACTATGGGTTGAAGTTT+TGG | + | chr4.2:87719764-87719783 | None:intergenic | 40.0% |
| ACACAGCAGAAATCCAAGGA+TGG | - | chr4.2:87717780-87717799 | MS.gene33398:intron | 45.0% | |
| AGATGTAGACAGAAGTGACG+CGG | - | chr4.2:87719610-87719629 | MS.gene33398:CDS | 45.0% | |
| ATATGGGGAGAACAAAGAGG+AGG | + | chr4.2:87717831-87717850 | None:intergenic | 45.0% | |
| ATCCAAGGATGGTTCAACCA+TGG | - | chr4.2:87717791-87717810 | MS.gene33398:intron | 45.0% | |
| ATTGTCCCTAGGAACTGATC+GGG | + | chr4.2:87718970-87718989 | None:intergenic | 45.0% | |
| CACTATCGGATTTCATGGGT+TGG | - | chr4.2:87719651-87719670 | MS.gene33398:CDS | 45.0% | |
| CAGAATGGAAGAGCAAGTCT+AGG | - | chr4.2:87718904-87718923 | MS.gene33398:CDS | 45.0% | |
| CCTGCTTCATCAAGAAGTCA+AGG | - | chr4.2:87716918-87716937 | MS.gene33398:CDS | 45.0% | |
| CCTTGACTTCTTGATGAAGC+AGG | + | chr4.2:87716921-87716940 | None:intergenic | 45.0% | |
| CGGACTAAGAAGTGGATACA+AGG | - | chr4.2:87718156-87718175 | MS.gene33398:CDS | 45.0% | |
| CGGACTTCCACAATCTTCAT+TGG | - | chr4.2:87719179-87719198 | MS.gene33398:CDS | 45.0% | |
| CTATTGGGGGAAGATATGTC+TGG | - | chr4.2:87717428-87717447 | MS.gene33398:CDS | 45.0% | |
| CTCCATCTTGCTTTCCTTTC+CGG | + | chr4.2:87717705-87717724 | None:intergenic | 45.0% | |
| CTGCTTCTTCTTCCTTGAGT+TGG | + | chr4.2:87719545-87719564 | None:intergenic | 45.0% | |
| CTGTCTACATCTCTTGGAGT+TGG | + | chr4.2:87719602-87719621 | None:intergenic | 45.0% | |
| GAAACCGTGACAGTTCGAAT+TGG | - | chr4.2:87718568-87718587 | MS.gene33398:intron | 45.0% | |
| GATATGTCTGGTGGAGGAAA+AGG | - | chr4.2:87717440-87717459 | MS.gene33398:CDS | 45.0% | |
| GCAGGATCATCTTCAGAAGT+AGG | + | chr4.2:87716903-87716922 | None:intergenic | 45.0% | |
| GCTTCAGATAAACCTTCTGC+AGG | + | chr4.2:87718409-87718428 | None:intergenic | 45.0% | |
| GGATTGGACTCCTAACGAAA+TGG | - | chr4.2:87717201-87717220 | MS.gene33398:intron | 45.0% | |
| GGGACTGAGAAGTGAATACA+GGG | + | chr4.2:87718077-87718096 | None:intergenic | 45.0% | |
| GTATCAAGCTTTCTCAAGGC+AGG | + | chr4.2:87717951-87717970 | None:intergenic | 45.0% | |
| TCCAACACAGCAGAAATCCA+AGG | - | chr4.2:87717776-87717795 | MS.gene33398:intron | 45.0% | |
| TCCGATAGTGTCATCGAACA+AGG | + | chr4.2:87719641-87719660 | None:intergenic | 45.0% | |
| TCCTTGGATTTCTGCTGTGT+TGG | + | chr4.2:87717780-87717799 | None:intergenic | 45.0% | |
| TCTGCAGGTACTTTAGGTGT+AGG | + | chr4.2:87718394-87718413 | None:intergenic | 45.0% | |
| TGGGACTGAGAAGTGAATAC+AGG | + | chr4.2:87718078-87718097 | None:intergenic | 45.0% | |
| ! | ACACCTAAAGTACCTGCAGA+AGG | - | chr4.2:87718394-87718413 | MS.gene33398:intron | 45.0% |
| !! | CTCTTGAAACATCGGTTTCC+CGG | - | chr4.2:87719159-87719178 | MS.gene33398:CDS | 45.0% |
| ACAAAACGCCATGCTCGTTC+GGG | + | chr4.2:87718128-87718147 | None:intergenic | 50.0% | |
| AGTTGTGCACGGGGATATCT+TGG | + | chr4.2:87717096-87717115 | None:intergenic | 50.0% | |
| ATGGGGTTCTGCTGTGAGTT+TGG | - | chr4.2:87719092-87719111 | MS.gene33398:intron | 50.0% | |
| CAAGGATGGTTCAACCATGG+AGG | - | chr4.2:87717794-87717813 | MS.gene33398:intron | 50.0% | |
| CACAAAACGCCATGCTCGTT+CGG | + | chr4.2:87718129-87718148 | None:intergenic | 50.0% | |
| CACCGGAAAGGAAAGCAAGA+TGG | - | chr4.2:87717700-87717719 | MS.gene33398:intron | 50.0% | |
| CATCTTGCTTTCCTTTCCGG+TGG | + | chr4.2:87717702-87717721 | None:intergenic | 50.0% | |
| CTCCATGGTTGAACCATCCT+TGG | + | chr4.2:87717796-87717815 | None:intergenic | 50.0% | |
| CTTGGAGTTGGACACTTGTC+TGG | + | chr4.2:87719590-87719609 | None:intergenic | 50.0% | |
| TCAAGGCAGGGATGTTCATG+TGG | + | chr4.2:87717938-87717957 | None:intergenic | 50.0% | |
| TCGATCCCGATCAGTTCCTA+GGG | - | chr4.2:87718962-87718981 | MS.gene33398:intron | 50.0% | |
| TTAGGAGTCCAATCCCTGAC+CGG | + | chr4.2:87717196-87717215 | None:intergenic | 50.0% | |
| TTCGATCCCGATCAGTTCCT+AGG | - | chr4.2:87718961-87718980 | MS.gene33398:intron | 50.0% | |
| TTGGGGGAAGATATGTCTGG+TGG | - | chr4.2:87717431-87717450 | MS.gene33398:CDS | 50.0% | |
| ! | AGCAGAACCCCATGCTGATT+TGG | + | chr4.2:87719085-87719104 | None:intergenic | 50.0% |
| ! | CTTTTAGTCCCGAACGAGCA+TGG | - | chr4.2:87718117-87718136 | MS.gene33398:CDS | 50.0% |
| ! | GTTGGACACTTGTCTGGCTT+TGG | + | chr4.2:87719584-87719603 | None:intergenic | 50.0% |
| ! | TAAGCAAATACAAGGCGCCC+TGG | + | chr4.2:87718810-87718829 | None:intergenic | 50.0% |
| !! | CACTTGTCTGGCTTTGGAAC+TGG | + | chr4.2:87719578-87719597 | None:intergenic | 50.0% |
| !! | TTTTCCATACGCACCGGTCA+GGG | - | chr4.2:87717180-87717199 | MS.gene33398:intron | 50.0% |
| !! | TTTTTCCATACGCACCGGTC+AGG | - | chr4.2:87717179-87717198 | MS.gene33398:intron | 50.0% |
| GCTTTCCTTTCCGGTGGCAT+TGG | + | chr4.2:87717696-87717715 | None:intergenic | 55.0% | |
| GGGGAAGATATGTCTGGTGG+AGG | - | chr4.2:87717434-87717453 | MS.gene33398:CDS | 55.0% | |
| TAGAGCCAATGCCACCGGAA+AGG | - | chr4.2:87717688-87717707 | MS.gene33398:CDS | 55.0% | |
| ! | CGAACGAGCATGGCGTTTTG+TGG | - | chr4.2:87718127-87718146 | MS.gene33398:CDS | 55.0% |
| !! | TTTCCGGTGGCATTGGCTCT+AGG | + | chr4.2:87717689-87717708 | None:intergenic | 55.0% |
| CAATCCCTGACCGGTGCGTA+TGG | + | chr4.2:87717187-87717206 | None:intergenic | 60.0% | |
| ! | CATACGCACCGGTCAGGGAT+TGG | - | chr4.2:87717185-87717204 | MS.gene33398:intron | 60.0% |
| GCGCCTAGAGCCAATGCCAC+CGG | - | chr4.2:87717683-87717702 | MS.gene33398:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 87716774 | 87719847 | 87716774 | ID=MS.gene33398 |
| chr4.2 | mRNA | 87716774 | 87719847 | 87716774 | ID=MS.gene33398.t1;Parent=MS.gene33398 |
| chr4.2 | exon | 87719580 | 87719847 | 87719580 | ID=MS.gene33398.t1.exon1;Parent=MS.gene33398.t1 |
| chr4.2 | CDS | 87719580 | 87719847 | 87719580 | ID=cds.MS.gene33398.t1;Parent=MS.gene33398.t1 |
| chr4.2 | exon | 87719112 | 87719228 | 87719112 | ID=MS.gene33398.t1.exon2;Parent=MS.gene33398.t1 |
| chr4.2 | CDS | 87719112 | 87719228 | 87719112 | ID=cds.MS.gene33398.t1;Parent=MS.gene33398.t1 |
| chr4.2 | exon | 87718806 | 87718960 | 87718806 | ID=MS.gene33398.t1.exon3;Parent=MS.gene33398.t1 |
| chr4.2 | CDS | 87718806 | 87718960 | 87718806 | ID=cds.MS.gene33398.t1;Parent=MS.gene33398.t1 |
| chr4.2 | exon | 87718641 | 87718715 | 87718641 | ID=MS.gene33398.t1.exon4;Parent=MS.gene33398.t1 |
| chr4.2 | CDS | 87718641 | 87718715 | 87718641 | ID=cds.MS.gene33398.t1;Parent=MS.gene33398.t1 |
| chr4.2 | exon | 87718066 | 87718326 | 87718066 | ID=MS.gene33398.t1.exon5;Parent=MS.gene33398.t1 |
| chr4.2 | CDS | 87718066 | 87718326 | 87718066 | ID=cds.MS.gene33398.t1;Parent=MS.gene33398.t1 |
| chr4.2 | exon | 87717394 | 87717714 | 87717394 | ID=MS.gene33398.t1.exon6;Parent=MS.gene33398.t1 |
| chr4.2 | CDS | 87717394 | 87717714 | 87717394 | ID=cds.MS.gene33398.t1;Parent=MS.gene33398.t1 |
| chr4.2 | exon | 87716774 | 87717190 | 87716774 | ID=MS.gene33398.t1.exon7;Parent=MS.gene33398.t1 |
| chr4.2 | CDS | 87716774 | 87717190 | 87716774 | ID=cds.MS.gene33398.t1;Parent=MS.gene33398.t1 |
| Gene Sequence |
| Protein sequence |
