Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061071.t1 | XP_013466729.1 | 96.7 | 663 | 20 | 1 | 1 | 663 | 1 | 661 | 0.00E+00 | 1315.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061071.t1 | Q9XIA9 | 67.2 | 658 | 210 | 5 | 9 | 663 | 11 | 665 | 1.2e-272 | 940.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061071.t1 | A0A072VRL7 | 96.7 | 663 | 20 | 1 | 1 | 663 | 1 | 661 | 0.0e+00 | 1315.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053836 | MS.gene061071 | 0.824773 | 6.73E-54 | -1.69E-46 |
| MS.gene056875 | MS.gene061071 | 0.803834 | 2.89E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene061071 | 0.847797 | 9.21E-60 | -1.69E-46 |
| MS.gene056933 | MS.gene061071 | 0.846356 | 2.29E-59 | -1.69E-46 |
| MS.gene056935 | MS.gene061071 | 0.838399 | 2.94E-57 | -1.69E-46 |
| MS.gene057469 | MS.gene061071 | 0.808699 | 2.72E-50 | -1.69E-46 |
| MS.gene060559 | MS.gene061071 | 0.872253 | 3.67E-67 | -1.69E-46 |
| MS.gene061071 | MS.gene061688 | 0.946385 | 5.10E-105 | -1.69E-46 |
| MS.gene061071 | MS.gene066716 | 0.800999 | 1.11E-48 | -1.69E-46 |
| MS.gene061071 | MS.gene066941 | 0.805179 | 1.51E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene071062 | 0.857373 | 1.71E-62 | -1.69E-46 |
| MS.gene061071 | MS.gene072897 | 0.825278 | 5.11E-54 | -1.69E-46 |
| MS.gene061071 | MS.gene09136 | 0.805614 | 1.23E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene23458 | 0.808161 | 3.55E-50 | -1.69E-46 |
| MS.gene061071 | MS.gene23535 | 0.804093 | 2.55E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene25889 | 0.802359 | 5.82E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene29760 | 0.867061 | 1.81E-65 | -1.69E-46 |
| MS.gene061071 | MS.gene32626 | 0.819587 | 1.07E-52 | -1.69E-46 |
| MS.gene061071 | MS.gene33484 | 0.85406 | 1.58E-61 | -1.69E-46 |
| MS.gene061071 | MS.gene35391 | 0.810862 | 9.33E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene35394 | -0.836593 | 8.54E-57 | -1.69E-46 |
| MS.gene061071 | MS.gene50436 | 0.813813 | 2.12E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene50644 | 0.801652 | 8.14E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene52399 | 0.819666 | 1.03E-52 | -1.69E-46 |
| MS.gene061071 | MS.gene59143 | 0.805114 | 1.56E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene59730 | 0.812545 | 4.02E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene59903 | 0.871978 | 4.53E-67 | -1.69E-46 |
| MS.gene061071 | MS.gene63507 | 0.81157 | 6.55E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene64621 | 0.822305 | 2.54E-53 | -1.69E-46 |
| MS.gene061071 | MS.gene65106 | 0.812647 | 3.82E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene65665 | 0.820848 | 5.52E-53 | -1.69E-46 |
| MS.gene061071 | MS.gene67058 | 0.825123 | 5.57E-54 | -1.69E-46 |
| MS.gene061071 | MS.gene68907 | 0.801395 | 9.19E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene69001 | 0.840202 | 1.00E-57 | -1.69E-46 |
| MS.gene061071 | MS.gene69014 | 0.801462 | 8.90E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene69862 | 0.82109 | 4.86E-53 | -1.69E-46 |
| MS.gene061071 | MS.gene71456 | 0.811913 | 5.52E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene72242 | 0.815011 | 1.15E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene74599 | 0.831191 | 1.92E-55 | -1.69E-46 |
| MS.gene061071 | MS.gene76554 | 0.801092 | 1.06E-48 | -1.69E-46 |
| MS.gene061071 | MS.gene77301 | 0.80896 | 2.40E-50 | -1.69E-46 |
| MS.gene061071 | MS.gene77302 | 0.83544 | 1.68E-56 | -1.69E-46 |
| MS.gene061071 | MS.gene78462 | 0.811305 | 7.48E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene79217 | 0.812687 | 3.74E-51 | -1.69E-46 |
| MS.gene061071 | MS.gene82797 | 0.802128 | 6.50E-49 | -1.69E-46 |
| MS.gene061071 | MS.gene89900 | 0.83871 | 2.45E-57 | -1.69E-46 |
| MS.gene061071 | MS.gene90615 | 0.82851 | 8.64E-55 | -1.69E-46 |
| MS.gene061071 | MS.gene91547 | 0.808181 | 3.51E-50 | -1.69E-46 |
| MS.gene061071 | MS.gene98786 | 0.82597 | 3.51E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene061071 | MS.gene026629 | PPI |
| MS.gene061071 | MS.gene28831 | PPI |
| MS.gene061071 | MS.gene80076 | PPI |
| MS.gene061071 | MS.gene63009 | PPI |
| MS.gene061071 | MS.gene21663 | PPI |
| MS.gene061071 | MS.gene044334 | PPI |
| MS.gene061071 | MS.gene005494 | PPI |
| MS.gene061071 | MS.gene22309 | PPI |
| MS.gene061071 | MS.gene21662 | PPI |
| MS.gene061071 | MS.gene33594 | PPI |
| MS.gene061071 | MS.gene25695 | PPI |
| MS.gene061071 | MS.gene75435 | PPI |
| MS.gene061071 | MS.gene99632 | PPI |
| MS.gene061071 | MS.gene22308 | PPI |
| MS.gene061071 | MS.gene07328 | PPI |
| MS.gene061071 | MS.gene70469 | PPI |
| MS.gene061071 | MS.gene050419 | PPI |
| MS.gene061071 | MS.gene71307 | PPI |
| MS.gene061071 | MS.gene20877 | PPI |
| MS.gene061071 | MS.gene06068 | PPI |
| MS.gene061071 | MS.gene55795 | PPI |
| MS.gene061071 | MS.gene045073 | PPI |
| MS.gene061071 | MS.gene072680 | PPI |
| MS.gene061071 | MS.gene90444 | PPI |
| MS.gene061071 | MS.gene07080 | PPI |
| MS.gene061071 | MS.gene072726 | PPI |
| MS.gene061071 | MS.gene048924 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061071.t1 | MTR_1g034360 | 96.682 | 663 | 20 | 1 | 1 | 663 | 1 | 661 | 0.0 | 1331 |
| MS.gene061071.t1 | MTR_4g068670 | 79.879 | 661 | 129 | 3 | 1 | 661 | 1 | 657 | 0.0 | 1122 |
| MS.gene061071.t1 | MTR_5g009350 | 57.100 | 662 | 280 | 3 | 3 | 663 | 4 | 662 | 0.0 | 803 |
| MS.gene061071.t1 | MTR_8g099420 | 56.860 | 656 | 279 | 3 | 5 | 659 | 7 | 659 | 0.0 | 794 |
| MS.gene061071.t1 | MTR_5g009350 | 57.805 | 647 | 269 | 3 | 3 | 648 | 4 | 647 | 0.0 | 793 |
| MS.gene061071.t1 | MTR_5g009360 | 57.034 | 654 | 275 | 4 | 5 | 656 | 6 | 655 | 0.0 | 788 |
| MS.gene061071.t1 | MTR_5g009350 | 56.498 | 554 | 237 | 3 | 3 | 555 | 4 | 554 | 0.0 | 660 |
| MS.gene061071.t1 | MTR_5g009350 | 57.143 | 546 | 230 | 3 | 3 | 547 | 4 | 546 | 0.0 | 659 |
| MS.gene061071.t1 | MTR_7g109830 | 48.788 | 660 | 332 | 4 | 5 | 662 | 4 | 659 | 0.0 | 650 |
| MS.gene061071.t1 | MTR_5g009360 | 57.854 | 522 | 215 | 3 | 137 | 656 | 11 | 529 | 0.0 | 645 |
| MS.gene061071.t1 | MTR_1g086600 | 46.375 | 662 | 347 | 5 | 5 | 662 | 26 | 683 | 0.0 | 613 |
| MS.gene061071.t1 | MTR_1g104810 | 40.260 | 616 | 348 | 9 | 48 | 657 | 18 | 619 | 2.39e-150 | 449 |
| MS.gene061071.t1 | MTR_1g104810 | 39.782 | 641 | 363 | 11 | 26 | 657 | 60 | 686 | 5.63e-149 | 448 |
| MS.gene061071.t1 | MTR_3g082660 | 32.579 | 663 | 389 | 17 | 36 | 655 | 79 | 726 | 9.48e-94 | 305 |
| MS.gene061071.t1 | MTR_1g030290 | 31.485 | 613 | 368 | 16 | 74 | 655 | 103 | 694 | 5.58e-87 | 286 |
| MS.gene061071.t1 | MTR_3g087980 | 29.678 | 684 | 423 | 15 | 12 | 655 | 27 | 692 | 5.69e-87 | 286 |
| MS.gene061071.t1 | MTR_3g084470 | 26.727 | 666 | 402 | 23 | 48 | 656 | 79 | 715 | 1.13e-46 | 176 |
| MS.gene061071.t1 | MTR_3g084450 | 25.444 | 676 | 401 | 23 | 48 | 656 | 81 | 720 | 2.77e-46 | 175 |
| MS.gene061071.t1 | MTR_3g084450 | 28.425 | 489 | 272 | 17 | 219 | 656 | 51 | 512 | 1.84e-40 | 155 |
| MS.gene061071.t1 | MTR_8g083170 | 24.812 | 665 | 421 | 19 | 48 | 656 | 83 | 724 | 2.65e-39 | 154 |
| MS.gene061071.t1 | MTR_4g057730 | 24.449 | 544 | 311 | 20 | 20 | 545 | 3 | 464 | 2.44e-25 | 110 |
| MS.gene061071.t1 | MTR_4g057730 | 24.449 | 544 | 311 | 20 | 20 | 545 | 3 | 464 | 2.49e-25 | 110 |
| MS.gene061071.t1 | MTR_4g057730 | 24.521 | 522 | 295 | 19 | 20 | 523 | 3 | 443 | 4.12e-25 | 109 |
| MS.gene061071.t1 | MTR_2g095510 | 24.118 | 510 | 288 | 20 | 52 | 545 | 35 | 461 | 2.59e-23 | 104 |
| MS.gene061071.t1 | MTR_2g095510 | 24.180 | 488 | 272 | 19 | 52 | 523 | 35 | 440 | 5.19e-23 | 103 |
| MS.gene061071.t1 | MTR_8g074120 | 24.594 | 431 | 248 | 15 | 133 | 545 | 47 | 418 | 1.09e-20 | 96.3 |
| MS.gene061071.t1 | MTR_1g063110 | 24.734 | 376 | 209 | 16 | 192 | 550 | 157 | 475 | 1.18e-19 | 93.6 |
| MS.gene061071.t1 | MTR_4g011790 | 23.340 | 497 | 289 | 15 | 103 | 568 | 115 | 550 | 1.25e-19 | 93.6 |
| MS.gene061071.t1 | MTR_5g007640 | 23.790 | 496 | 274 | 17 | 80 | 550 | 98 | 514 | 7.29e-19 | 91.3 |
| MS.gene061071.t1 | MTR_4g011790 | 23.061 | 490 | 290 | 15 | 103 | 568 | 115 | 541 | 1.90e-18 | 90.1 |
| MS.gene061071.t1 | MTR_4g011790 | 23.061 | 490 | 290 | 15 | 103 | 568 | 115 | 541 | 2.19e-18 | 89.7 |
| MS.gene061071.t1 | MTR_8g074040 | 22.692 | 520 | 312 | 18 | 52 | 545 | 52 | 507 | 3.82e-18 | 89.0 |
| MS.gene061071.t1 | MTR_3g035130 | 20.939 | 511 | 305 | 16 | 71 | 568 | 25 | 449 | 2.09e-16 | 82.8 |
| MS.gene061071.t1 | MTR_4g005750 | 23.859 | 482 | 289 | 15 | 80 | 550 | 54 | 468 | 3.22e-16 | 82.4 |
| MS.gene061071.t1 | MTR_3g088880 | 26.371 | 383 | 219 | 12 | 151 | 523 | 128 | 457 | 4.72e-15 | 79.0 |
| MS.gene061071.t1 | MTR_8g074040 | 22.759 | 435 | 251 | 15 | 133 | 545 | 18 | 389 | 7.64e-15 | 78.2 |
| MS.gene061071.t1 | MTR_4g128337 | 24.152 | 501 | 267 | 21 | 79 | 550 | 59 | 475 | 7.60e-14 | 75.1 |
| MS.gene061071.t1 | MTR_1g073180 | 34.074 | 135 | 85 | 4 | 412 | 545 | 325 | 456 | 2.69e-11 | 67.0 |
| MS.gene061071.t1 | MTR_1g073180 | 36.283 | 113 | 69 | 3 | 412 | 523 | 347 | 457 | 3.28e-11 | 66.6 |
| MS.gene061071.t1 | MTR_5g023730 | 28.662 | 157 | 90 | 6 | 411 | 552 | 323 | 472 | 4.38e-11 | 66.2 |
| MS.gene061071.t1 | MTR_1569s0010 | 30.270 | 185 | 117 | 6 | 388 | 564 | 298 | 478 | 9.55e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene061071.t1 | AT1G49430 | 67.173 | 658 | 210 | 5 | 9 | 663 | 11 | 665 | 0.0 | 945 |
| MS.gene061071.t1 | AT1G64400 | 55.030 | 656 | 292 | 2 | 5 | 659 | 6 | 659 | 0.0 | 798 |
| MS.gene061071.t1 | AT4G23850 | 58.015 | 655 | 267 | 5 | 5 | 656 | 7 | 656 | 0.0 | 792 |
| MS.gene061071.t1 | AT4G11030 | 55.758 | 660 | 288 | 3 | 5 | 663 | 7 | 663 | 0.0 | 774 |
| MS.gene061071.t1 | AT1G49430 | 65.859 | 495 | 164 | 4 | 9 | 501 | 11 | 502 | 0.0 | 699 |
| MS.gene061071.t1 | AT2G47240 | 48.333 | 660 | 335 | 4 | 5 | 662 | 4 | 659 | 0.0 | 647 |
| MS.gene061071.t1 | AT2G47240 | 48.333 | 660 | 335 | 4 | 5 | 662 | 4 | 659 | 0.0 | 647 |
| MS.gene061071.t1 | AT2G47240 | 48.333 | 660 | 335 | 4 | 5 | 662 | 4 | 659 | 0.0 | 647 |
| MS.gene061071.t1 | AT2G47240 | 48.922 | 603 | 303 | 3 | 62 | 662 | 1 | 600 | 0.0 | 601 |
| MS.gene061071.t1 | AT5G27600 | 42.301 | 617 | 334 | 11 | 48 | 657 | 88 | 689 | 8.34e-158 | 471 |
| MS.gene061071.t1 | AT3G05970 | 42.602 | 615 | 335 | 9 | 48 | 657 | 88 | 689 | 1.20e-157 | 471 |
| MS.gene061071.t1 | AT2G04350 | 31.610 | 677 | 375 | 17 | 40 | 655 | 70 | 719 | 2.32e-98 | 317 |
| MS.gene061071.t1 | AT2G04350 | 31.610 | 677 | 375 | 17 | 40 | 655 | 70 | 719 | 2.32e-98 | 317 |
| MS.gene061071.t1 | AT1G77590 | 31.068 | 618 | 361 | 16 | 74 | 655 | 102 | 690 | 9.80e-86 | 283 |
| MS.gene061071.t1 | AT1G77590 | 31.699 | 571 | 325 | 16 | 121 | 655 | 3 | 544 | 3.34e-79 | 262 |
| MS.gene061071.t1 | AT3G23790 | 25.260 | 673 | 404 | 23 | 48 | 656 | 85 | 722 | 4.76e-41 | 160 |
| MS.gene061071.t1 | AT4G14070 | 24.441 | 671 | 409 | 24 | 45 | 655 | 94 | 726 | 8.95e-39 | 153 |
| MS.gene061071.t1 | AT3G21240 | 24.638 | 483 | 286 | 15 | 80 | 550 | 65 | 481 | 1.77e-22 | 102 |
| MS.gene061071.t1 | AT3G21240 | 24.638 | 483 | 286 | 15 | 80 | 550 | 65 | 481 | 1.77e-22 | 102 |
| MS.gene061071.t1 | AT3G21240 | 24.224 | 483 | 292 | 15 | 80 | 552 | 65 | 483 | 2.00e-22 | 102 |
| MS.gene061071.t1 | AT1G51680 | 25.545 | 505 | 286 | 18 | 74 | 557 | 60 | 495 | 8.10e-21 | 97.1 |
| MS.gene061071.t1 | AT1G51680 | 25.197 | 508 | 284 | 17 | 74 | 557 | 60 | 495 | 1.02e-20 | 96.7 |
| MS.gene061071.t1 | AT1G51680 | 25.349 | 501 | 278 | 17 | 74 | 550 | 60 | 488 | 1.05e-20 | 96.3 |
| MS.gene061071.t1 | AT3G16170 | 23.299 | 485 | 287 | 15 | 103 | 569 | 130 | 547 | 1.19e-20 | 97.1 |
| MS.gene061071.t1 | AT4G05160 | 24.641 | 487 | 272 | 22 | 79 | 545 | 55 | 466 | 2.75e-19 | 92.4 |
| MS.gene061071.t1 | AT1G65890 | 24.025 | 487 | 283 | 16 | 79 | 539 | 40 | 465 | 6.80e-18 | 88.2 |
| MS.gene061071.t1 | AT4G19010 | 25.781 | 384 | 225 | 13 | 171 | 545 | 152 | 484 | 1.34e-17 | 87.0 |
| MS.gene061071.t1 | AT2G47245 | 47.368 | 76 | 40 | 0 | 22 | 97 | 53 | 128 | 2.52e-17 | 79.3 |
| MS.gene061071.t1 | AT5G16340 | 22.358 | 492 | 298 | 15 | 80 | 550 | 42 | 470 | 5.39e-17 | 85.1 |
| MS.gene061071.t1 | AT1G66120 | 22.505 | 511 | 301 | 16 | 79 | 565 | 40 | 479 | 6.94e-16 | 81.6 |
| MS.gene061071.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 4.83e-14 | 75.9 |
| MS.gene061071.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 5.62e-14 | 75.5 |
| MS.gene061071.t1 | AT3G21230 | 33.929 | 168 | 103 | 7 | 388 | 550 | 331 | 495 | 6.78e-14 | 75.1 |
| MS.gene061071.t1 | AT1G20500 | 25.817 | 306 | 171 | 11 | 222 | 523 | 198 | 451 | 8.62e-13 | 71.6 |
Find 162 sgRNAs with CRISPR-Local
Find 282 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTATTCAGATTTGGGTATA+TGG | 0.216286 | 1.4:-18932244 | MS.gene061071:intron |
| AGGGATCCGCAATAGGATTT+TGG | 0.231454 | 1.4:-18933753 | MS.gene061071:CDS |
| AAAGGCAAGACAATACATTT+TGG | 0.247388 | 1.4:-18932107 | MS.gene061071:CDS |
| TTCTGTTCTTTAGGGAAGTT+TGG | 0.261173 | 1.4:-18934357 | MS.gene061071:intron |
| AAGAAGGAAGCCGAGGAATT+TGG | 0.270880 | 1.4:-18934659 | MS.gene061071:CDS |
| CTTCCAAGCATCTGGTTGTT+GGG | 0.271312 | 1.4:+18936100 | None:intergenic |
| TGTCTGTCAACCTAATAATT+TGG | 0.273590 | 1.4:+18934207 | None:intergenic |
| GGTCTTATGGAGTTGCCTTC+TGG | 0.290118 | 1.4:-18936488 | MS.gene061071:CDS |
| TTGGCACATCCTGCTTCTCC+TGG | 0.291225 | 1.4:-18934640 | MS.gene061071:CDS |
| AGTCCCCTTGGGATTTCTTC+AGG | 0.293756 | 1.4:-18936460 | MS.gene061071:intron |
| TGTCTATTGACCAAATTATT+AGG | 0.302814 | 1.4:-18934217 | MS.gene061071:CDS |
| GGAGATCACTGTGGCATATA+TGG | 0.312178 | 1.4:-18935703 | MS.gene061071:CDS |
| GCAGCTCAAAGCTATTTATC+TGG | 0.319379 | 1.4:-18931931 | MS.gene061071:CDS |
| ATGATAAACTCCACAGCATT+AGG | 0.321331 | 1.4:+18935034 | None:intergenic |
| GAAATCATTGCAGGCGATAT+TGG | 0.325045 | 1.4:-18932495 | MS.gene061071:intron |
| ACTCAAGAGGTTATAGTTGA+TGG | 0.333385 | 1.4:-18932630 | MS.gene061071:CDS |
| ATTCTTAATAATGACACCTT+TGG | 0.336671 | 1.4:+18934262 | None:intergenic |
| TTATGCCAAAGATGGTCTTA+TGG | 0.345504 | 1.4:-18936501 | MS.gene061071:CDS |
| TTCTTAATAATGACACCTTT+GGG | 0.350658 | 1.4:+18934263 | None:intergenic |
| CAACTCCATAAGACCATCTT+TGG | 0.351332 | 1.4:+18936496 | None:intergenic |
| ATGAAACTCTCTCAGCTTAG+AGG | 0.361608 | 1.4:-18931960 | MS.gene061071:intron |
| CCTTCCAAGCATCTGGTTGT+TGG | 0.361935 | 1.4:+18936099 | None:intergenic |
| TTCTCATGGCTGAGCCCATT+TGG | 0.365351 | 1.4:+18935880 | None:intergenic |
| TTCTTTAGGGAAGTTTGGAT+TGG | 0.369117 | 1.4:-18934352 | MS.gene061071:intron |
| TTCAGGCAGGACCTTATTCA+TGG | 0.376144 | 1.4:-18935935 | MS.gene061071:intron |
| AAGGCGCAGCTCCGGATAAC+AGG | 0.381647 | 1.4:+18933078 | None:intergenic |
| CTTTATTCTTGCAGGATGTC+AGG | 0.384629 | 1.4:-18933644 | MS.gene061071:intron |
| TCCATTGCAATGATCCATTC+AGG | 0.384998 | 1.4:+18935670 | None:intergenic |
| TCCACATTATCACAAGGATA+TGG | 0.393095 | 1.4:-18933014 | MS.gene061071:intron |
| GTTGTAGCTATTGTGAGCTT+TGG | 0.395332 | 1.4:-18934701 | MS.gene061071:intron |
| TGCAATAGGTCGCCATTATC+TGG | 0.395954 | 1.4:+18933782 | None:intergenic |
| TCCTCAAGAGCCTTTCTGTC+GGG | 0.397134 | 1.4:+18932184 | None:intergenic |
| AAACACTCCTCCACATGAAT+AGG | 0.401909 | 1.4:+18933053 | None:intergenic |
| AAAAGCAAAGTTTCATCTGC+TGG | 0.404565 | 1.4:-18933403 | MS.gene061071:CDS |
| TTCTGGTTTAGAGTCCCCTT+GGG | 0.408562 | 1.4:-18936471 | MS.gene061071:CDS |
| CTTCTGGTTTAGAGTCCCCT+TGG | 0.410896 | 1.4:-18936472 | MS.gene061071:CDS |
| GGCGACCTATTGCATCTTCA+AGG | 0.411535 | 1.4:-18933773 | MS.gene061071:CDS |
| TCTTTAGGGAAGTTTGGATT+GGG | 0.415694 | 1.4:-18934351 | MS.gene061071:intron |
| ATGTACACAAGTGGAACAAC+TGG | 0.419117 | 1.4:-18934290 | MS.gene061071:CDS |
| CAGAAAGGCTCTTGAGGATT+GGG | 0.422632 | 1.4:-18932179 | MS.gene061071:CDS |
| ATACCAAGGGAATCATATAA+TGG | 0.425203 | 1.4:+18935514 | None:intergenic |
| TGATAGACTTGTGTTTGATA+AGG | 0.431832 | 1.4:-18933211 | MS.gene061071:intron |
| TTATGATGTTTCCATCCAAA+TGG | 0.433621 | 1.4:-18935895 | MS.gene061071:CDS |
| TCATGTATACGACCAGATAA+TGG | 0.442009 | 1.4:-18933794 | MS.gene061071:CDS |
| TTATATGTGAGCCATGAATA+AGG | 0.443315 | 1.4:+18935924 | None:intergenic |
| ACAGAAAGGCTCTTGAGGAT+TGG | 0.443998 | 1.4:-18932180 | MS.gene061071:CDS |
| TTTGACGCCTTCCAAGCATC+TGG | 0.449342 | 1.4:+18936092 | None:intergenic |
| TGGCACATCCTGCTTCTCCT+GGG | 0.450249 | 1.4:-18934639 | MS.gene061071:CDS |
| ATCTTCAAGGGATCCGCAAT+AGG | 0.452207 | 1.4:-18933760 | MS.gene061071:CDS |
| AATTTCTCCACGTGGCTCAC+TGG | 0.454045 | 1.4:+18932704 | None:intergenic |
| GGTCTCTTCAATTTAAATGT+TGG | 0.457179 | 1.4:+18931870 | None:intergenic |
| AGAGGAAACTCCTTGTTCTC+TGG | 0.462169 | 1.4:-18932675 | MS.gene061071:CDS |
| GTTGATGGTTGGTTTCATAC+AGG | 0.465886 | 1.4:-18932615 | MS.gene061071:intron |
| GGTCTTACTGAAAGCTGTGC+TGG | 0.466257 | 1.4:-18932840 | MS.gene061071:CDS |
| TACATGAGCAAGAGGAAGAA+AGG | 0.467152 | 1.4:+18933810 | None:intergenic |
| AGCCCCAACAACCAGATGCT+TGG | 0.468239 | 1.4:-18936103 | MS.gene061071:CDS |
| TTGGATGAGCTTAAAAGCAC+TGG | 0.469943 | 1.4:-18932088 | MS.gene061071:CDS |
| CGCGTTCGTATCCTGTTATC+CGG | 0.470460 | 1.4:-18933089 | MS.gene061071:CDS |
| TCAAATTGATGAACTATATG+AGG | 0.472343 | 1.4:-18931573 | MS.gene061071:CDS |
| TTGGCAGGGATTCTGTTAAG+AGG | 0.476289 | 1.4:-18936126 | MS.gene061071:intron |
| CATGGCTGAGCCCATTTGGA+TGG | 0.480170 | 1.4:+18935884 | None:intergenic |
| AGTTTCAATTGCATTTGTAC+AGG | 0.482761 | 1.4:-18934999 | MS.gene061071:CDS |
| AAACTCTCCCCAGGAGAAGC+AGG | 0.483921 | 1.4:+18934631 | None:intergenic |
| CAACTATAACCTCTTGAGTA+AGG | 0.484832 | 1.4:+18932634 | None:intergenic |
| TGAGTCATTCTTGGTGGCTG+TGG | 0.489343 | 1.4:-18932212 | MS.gene061071:CDS |
| GTTCCATTATATGATTCCCT+TGG | 0.491778 | 1.4:-18935517 | MS.gene061071:intron |
| AATAGGCAAAGGCGCAGCTC+CGG | 0.492905 | 1.4:+18933070 | None:intergenic |
| TATGATGTTTCCATCCAAAT+GGG | 0.493538 | 1.4:-18935894 | MS.gene061071:CDS |
| GCTGGGTGTTTCACAGCAAT+CGG | 0.493542 | 1.4:-18932822 | MS.gene061071:CDS |
| CCTGGCCTCGATGGTTGTCA+TGG | 0.495595 | 1.4:+18932764 | None:intergenic |
| TTCATGGCTCACATATAAAG+AGG | 0.498137 | 1.4:-18935919 | MS.gene061071:CDS |
| AGATCTCTCTCTATGTCAAA+GGG | 0.498603 | 1.4:+18931900 | None:intergenic |
| GGAAGGCCTGCTACATCTGA+TGG | 0.500055 | 1.4:-18936557 | MS.gene061071:CDS |
| ATTGACGCCACGGCTTCTCA+TGG | 0.502513 | 1.4:+18935866 | None:intergenic |
| TTGTAGTATTTCAGTAATTG+TGG | 0.505813 | 1.4:+18931849 | None:intergenic |
| ATTGGAGAATGGCAACCAAA+TGG | 0.506109 | 1.4:-18932477 | MS.gene061071:CDS |
| AGTGCGTCATATCCCATCTC+TGG | 0.507383 | 1.4:+18932729 | None:intergenic |
| ATCTTTATGTGAAAATCTAA+AGG | 0.508165 | 1.4:-18932125 | MS.gene061071:CDS |
| CTCTCTATGTCAAAGGGAGT+TGG | 0.511421 | 1.4:+18931906 | None:intergenic |
| TGTTTCTGCCACACAAAAGA+AGG | 0.513138 | 1.4:-18934675 | MS.gene061071:CDS |
| GAACTATATGAGGAAGCAAA+AGG | 0.513195 | 1.4:-18931563 | MS.gene061071:CDS |
| CTGGGGAGAGTTTCTCCAGT+TGG | 0.516499 | 1.4:-18934621 | MS.gene061071:intron |
| GGATCCCTTGAAGATGCAAT+AGG | 0.517759 | 1.4:+18933768 | None:intergenic |
| AGATTCAAGCCTGGCCTCGA+TGG | 0.521799 | 1.4:+18932755 | None:intergenic |
| GCTTGAATCTGTACCAGAGA+TGG | 0.522837 | 1.4:-18932742 | MS.gene061071:CDS |
| GTCTTACTGAAAGCTGTGCT+GGG | 0.523419 | 1.4:-18932839 | MS.gene061071:CDS |
| CTAATACGATCGAAAACTCT+AGG | 0.525017 | 1.4:+18933570 | None:intergenic |
| TTCCAAGCATCTGGTTGTTG+GGG | 0.526086 | 1.4:+18936101 | None:intergenic |
| AACACAAGTCTATCAAAGAA+AGG | 0.528426 | 1.4:+18933219 | None:intergenic |
| CCATGACAACCATCGAGGCC+AGG | 0.528881 | 1.4:-18932764 | MS.gene061071:CDS |
| GGCACATCCTGCTTCTCCTG+GGG | 0.532121 | 1.4:-18934638 | MS.gene061071:CDS |
| TAGATCTCTCTCTATGTCAA+AGG | 0.533185 | 1.4:+18931899 | None:intergenic |
| CTCTGGTACAGATTCAAGCC+TGG | 0.534664 | 1.4:+18932746 | None:intergenic |
| AAGCATACCGATGATATAAG+AGG | 0.536051 | 1.4:+18932357 | None:intergenic |
| CCAACAACCAGATGCTTGGA+AGG | 0.540812 | 1.4:-18936099 | MS.gene061071:CDS |
| AGATGTATTTATGCCAAAGA+TGG | 0.542032 | 1.4:-18936509 | MS.gene061071:CDS |
| AAGAGGTTATAGTTGATGGT+TGG | 0.543539 | 1.4:-18932626 | MS.gene061071:CDS |
| GCAATGCCCTCTTATATCAT+CGG | 0.544084 | 1.4:-18932364 | MS.gene061071:intron |
| ACCATATCCTTGTGATAATG+TGG | 0.544732 | 1.4:+18933013 | None:intergenic |
| AGAACAAGGAGTTTCCTCTC+AGG | 0.546548 | 1.4:+18932679 | None:intergenic |
| AAAGGTGCTGCTTTGTGTTG+TGG | 0.547465 | 1.4:+18933237 | None:intergenic |
| GGCCTTCCATCAGATGTAGC+AGG | 0.548577 | 1.4:+18936551 | None:intergenic |
| CAAGTTAAGATATCTAGAGA+AGG | 0.550231 | 1.4:-18933265 | MS.gene061071:CDS |
| CTGTGAAAGTTGAGGAAGGA+AGG | 0.550847 | 1.4:-18936574 | MS.gene061071:CDS |
| AATATCTTTAAATTATCTCA+AGG | 0.551439 | 1.4:-18932426 | MS.gene061071:CDS |
| ATGGTGCCAACTGTCCTGAA+TGG | 0.551719 | 1.4:-18935684 | MS.gene061071:CDS |
| AACTCACGGGATTGACGCCA+CGG | 0.551992 | 1.4:+18935856 | None:intergenic |
| AAAGCAAAGTTTCATCTGCT+GGG | 0.552825 | 1.4:-18933402 | MS.gene061071:CDS |
| AATGATCCATTCAGGACAGT+TGG | 0.553413 | 1.4:+18935678 | None:intergenic |
| CTTGAATCTGTACCAGAGAT+GGG | 0.556327 | 1.4:-18932741 | MS.gene061071:CDS |
| ATCCTCAAGAGCCTTTCTGT+CGG | 0.564145 | 1.4:+18932183 | None:intergenic |
| GCAGGATGTGCCAAATTCCT+CGG | 0.568065 | 1.4:+18934649 | None:intergenic |
| CCCCGACAGAAAGGCTCTTG+AGG | 0.568269 | 1.4:-18932185 | MS.gene061071:CDS |
| GCATAAATACATCTATAGAC+AGG | 0.568294 | 1.4:+18936518 | None:intergenic |
| CCTCAAGAGCCTTTCTGTCG+GGG | 0.569393 | 1.4:+18932185 | None:intergenic |
| TGTGGTAGTCCCCGACAGAA+AGG | 0.569904 | 1.4:-18932194 | MS.gene061071:CDS |
| TATACTGTGAAAGTTGAGGA+AGG | 0.570953 | 1.4:-18936578 | MS.gene061071:CDS |
| GCCTTTGCCTATTCATGTGG+AGG | 0.572128 | 1.4:-18933060 | MS.gene061071:CDS |
| GGCTCAGCCATGAGAAGCCG+TGG | 0.573313 | 1.4:-18935873 | MS.gene061071:CDS |
| TGCACAATAATGTACACAAG+TGG | 0.574901 | 1.4:-18934299 | MS.gene061071:CDS |
| AGCATACCGATGATATAAGA+GGG | 0.579755 | 1.4:+18932358 | None:intergenic |
| GTGTCTGAACATCTTCAAGC+AGG | 0.580383 | 1.4:+18933619 | None:intergenic |
| TGCGCCTTTGCCTATTCATG+TGG | 0.582303 | 1.4:-18933063 | MS.gene061071:CDS |
| TTTCAGTTTCACAATGTCAG+AGG | 0.582437 | 1.4:-18936603 | None:intergenic |
| TTGCAGGCGATATTGGAGAA+TGG | 0.585107 | 1.4:-18932488 | MS.gene061071:intron |
| CTGGCCTCGATGGTTGTCAT+GGG | 0.586370 | 1.4:+18932765 | None:intergenic |
| GGTTTATACTGTGAAAGTTG+AGG | 0.592335 | 1.4:-18936582 | MS.gene061071:CDS |
| AAGTTAAGATATCTAGAGAA+GGG | 0.592630 | 1.4:-18933264 | MS.gene061071:CDS |
| TATTAGGTTGACAGACAAAG+TGG | 0.595571 | 1.4:-18934201 | MS.gene061071:intron |
| GCGACAAGACCTTACTCAAG+AGG | 0.596877 | 1.4:-18932643 | MS.gene061071:CDS |
| TCCTGAATGGATCATTGCAA+TGG | 0.598033 | 1.4:-18935671 | MS.gene061071:CDS |
| ATGCAATTGAAACTTCTGCA+TGG | 0.598960 | 1.4:+18935008 | None:intergenic |
| CGTGGAGAAATTTGCCTGAG+AGG | 0.601376 | 1.4:-18932693 | MS.gene061071:CDS |
| CTCAGGCAAATTTCTCCACG+TGG | 0.603950 | 1.4:+18932696 | None:intergenic |
| GCGACCTATTGCATCTTCAA+GGG | 0.606972 | 1.4:-18933772 | MS.gene061071:CDS |
| TGAGGAAGCAAAAGGAACAA+AGG | 0.608554 | 1.4:-18931555 | MS.gene061071:CDS |
| CTTAACAGGTCCTAATGCTG+TGG | 0.613820 | 1.4:-18935044 | MS.gene061071:intron |
| GGCCTGCTACATCTGATGGA+AGG | 0.614561 | 1.4:-18936553 | MS.gene061071:CDS |
| CTATAGACAGGTCCTACTGA+TGG | 0.615368 | 1.4:+18936530 | None:intergenic |
| ATTGACCTGAAGAAATCCCA+AGG | 0.616044 | 1.4:+18936455 | None:intergenic |
| TGGTCGTATACATGAGCAAG+AGG | 0.622399 | 1.4:+18933802 | None:intergenic |
| TGGTAGACAAAACAAGCGCT+AGG | 0.626047 | 1.4:-18933116 | MS.gene061071:intron |
| CTTGTGATAACCAGAGAACA+AGG | 0.630070 | 1.4:+18932665 | None:intergenic |
| CAAGGGGACTCTAAACCAGA+AGG | 0.631617 | 1.4:+18936473 | None:intergenic |
| GTACATTATTGTGCAAATGT+CGG | 0.632622 | 1.4:+18934307 | None:intergenic |
| CAACTGGAGAAACTCTCCCC+AGG | 0.632932 | 1.4:+18934622 | None:intergenic |
| TCCTCCACATGAATAGGCAA+AGG | 0.633863 | 1.4:+18933059 | None:intergenic |
| GCCTTGCCAAAATCCTATTG+CGG | 0.638671 | 1.4:+18933747 | None:intergenic |
| ACAATTACTGAAATACTACA+AGG | 0.640007 | 1.4:-18931847 | MS.gene061071:intron |
| GGAACACCACAAAATATAGT+CGG | 0.646136 | 1.4:+18933591 | None:intergenic |
| TTGACCTGAAGAAATCCCAA+GGG | 0.647515 | 1.4:+18936456 | None:intergenic |
| TGAATGGATCATTGCAATGG+AGG | 0.648367 | 1.4:-18935668 | MS.gene061071:intron |
| TCTGATGGAAGGCCATCAGT+AGG | 0.650031 | 1.4:-18936542 | MS.gene061071:CDS |
| CACACAAAAGAAGGAAGCCG+AGG | 0.662656 | 1.4:-18934666 | MS.gene061071:CDS |
| GAGTGTTTGAGAGTCACTAG+TGG | 0.663036 | 1.4:-18933038 | MS.gene061071:CDS |
| TAGACAAAACAAGCGCTAGG+TGG | 0.692819 | 1.4:-18933113 | MS.gene061071:CDS |
| GGAACAACTGGAGAACCCAA+AGG | 0.705395 | 1.4:-18934278 | MS.gene061071:CDS |
| AGTGGATCCACATTATCACA+AGG | 0.714395 | 1.4:-18933020 | MS.gene061071:CDS |
| AATTCCCATGACAACCATCG+AGG | 0.735979 | 1.4:-18932769 | MS.gene061071:CDS |
| TGTTACTAGGGAGATCACTG+TGG | 0.745755 | 1.4:-18935712 | MS.gene061071:intron |
| GCACTTTCCAGTGAGCCACG+TGG | 0.753683 | 1.4:-18932711 | MS.gene061071:CDS |
| TGACCTGAAGAAATCCCAAG+GGG | 0.758321 | 1.4:+18936457 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATCTTTAAATTATCTCA+AGG | - | chr1.4:18935714-18935733 | MS.gene061071:intron | 15.0% |
| !! | ATAAGTTTATAGGTATTTAT+AGG | - | chr1.4:18934049-18934068 | MS.gene061071:intron | 15.0% |
| !! | GAAATTTATTATCTGATTAA+TGG | - | chr1.4:18932400-18932419 | MS.gene061071:CDS | 15.0% |
| !!! | ACAATTTTCTTTAAACTTTA+AGG | - | chr1.4:18933969-18933988 | MS.gene061071:intron | 15.0% |
| !!! | TAAAATAATATTGGTTTTGT+TGG | - | chr1.4:18935004-18935023 | MS.gene061071:CDS | 15.0% |
| !!! | TACAACATTGTAATATTTTT+AGG | - | chr1.4:18934277-18934296 | MS.gene061071:CDS | 15.0% |
| !!! | TACTTTTCTAATAAGTTTAT+AGG | - | chr1.4:18934039-18934058 | MS.gene061071:intron | 15.0% |
| !!! | TTTTATCTTAGAAGTTTTTA+TGG | - | chr1.4:18931985-18932004 | MS.gene061071:intron | 15.0% |
| !! | AAACTACAACAAAGAATAAA+TGG | + | chr1.4:18932119-18932138 | None:intergenic | 20.0% |
| !! | AATCGCAACTAAAATAATAT+TGG | - | chr1.4:18934995-18935014 | MS.gene061071:CDS | 20.0% |
| !! | ACATGTATAATAGTAGTATT+TGG | - | chr1.4:18931952-18931971 | MS.gene061071:intron | 20.0% |
| !! | ATCTTTATGTGAAAATCTAA+AGG | - | chr1.4:18936015-18936034 | MS.gene061071:intron | 20.0% |
| !! | ATGAATCTATCAAAAAGATA+AGG | + | chr1.4:18931928-18931947 | None:intergenic | 20.0% |
| !! | CAAAATAGTAAAATTGAATC+AGG | + | chr1.4:18932573-18932592 | None:intergenic | 20.0% |
| !! | CAAAATCATATATACATACT+TGG | + | chr1.4:18936087-18936106 | None:intergenic | 20.0% |
| !! | CTATATAGTTTCACAAATAT+AGG | + | chr1.4:18934242-18934261 | None:intergenic | 20.0% |
| !! | TAATAGAACATTATGCTTTA+TGG | - | chr1.4:18934127-18934146 | MS.gene061071:intron | 20.0% |
| !! | TACTGAAAAATTGAATGAAT+TGG | + | chr1.4:18934021-18934040 | None:intergenic | 20.0% |
| !! | TATAGTAGAATTTCACAATT+TGG | - | chr1.4:18936438-18936457 | MS.gene061071:intron | 20.0% |
| !!! | ATCATTTATTTTTTTGTGAC+AGG | - | chr1.4:18935279-18935298 | MS.gene061071:intron | 20.0% |
| !!! | ATTAATGGTTTTATGTTACT+AGG | - | chr1.4:18932415-18932434 | MS.gene061071:CDS | 20.0% |
| !!! | ATTCAATTTTACTATTTTGC+AGG | - | chr1.4:18932574-18932593 | MS.gene061071:intron | 20.0% |
| !!! | CATATACTATTTCTCATAAA+AGG | + | chr1.4:18935242-18935261 | None:intergenic | 20.0% |
| !!! | CCACAATATAAAAATTTTTG+AGG | + | chr1.4:18933645-18933664 | None:intergenic | 20.0% |
| !!! | CCTCAAAAATTTTTATATTG+TGG | - | chr1.4:18933642-18933661 | MS.gene061071:intron | 20.0% |
| !!! | TAAAGTTTTCACAATTTAAC+AGG | + | chr1.4:18932164-18932183 | None:intergenic | 20.0% |
| !!! | TGCATATCAATATTTTCAAA+AGG | + | chr1.4:18934083-18934102 | None:intergenic | 20.0% |
| !!! | TTAATGGTTTTATGTTACTA+GGG | - | chr1.4:18932416-18932435 | MS.gene061071:CDS | 20.0% |
| !!! | TTTATAGTATAAAGTGCTAT+AGG | + | chr1.4:18936365-18936384 | None:intergenic | 20.0% |
| ! | AAACAAATGTTAGTTCAGTA+AGG | + | chr1.4:18933277-18933296 | None:intergenic | 25.0% |
| ! | AAAGAAATCACATTCTTGTT+TGG | + | chr1.4:18932988-18933007 | None:intergenic | 25.0% |
| ! | AACAAATGTTAGTTCAGTAA+GGG | + | chr1.4:18933276-18933295 | None:intergenic | 25.0% |
| ! | AAGTTAAGATATCTAGAGAA+GGG | - | chr1.4:18934876-18934895 | MS.gene061071:intron | 25.0% |
| ! | AATATTCTCTTTATTCTTGC+AGG | - | chr1.4:18934488-18934507 | MS.gene061071:intron | 25.0% |
| ! | ACAATTACTGAAATACTACA+AGG | - | chr1.4:18936293-18936312 | MS.gene061071:intron | 25.0% |
| ! | ACTATAATCCAAGTTAGTTA+AGG | + | chr1.4:18936424-18936443 | None:intergenic | 25.0% |
| ! | AGTTTGTCAACATTAAATAG+AGG | + | chr1.4:18933406-18933425 | None:intergenic | 25.0% |
| ! | ATGTGTATAACAGTAGTATT+TGG | + | chr1.4:18932844-18932863 | None:intergenic | 25.0% |
| ! | ATTCTTAATAATGACACCTT+TGG | + | chr1.4:18933881-18933900 | None:intergenic | 25.0% |
| ! | CAAACAAATAAACCTTAATC+TGG | + | chr1.4:18933381-18933400 | None:intergenic | 25.0% |
| ! | CTACTGTTATACACATAATT+TGG | - | chr1.4:18932848-18932867 | MS.gene061071:intron | 25.0% |
| ! | GTTCTTCAAATCTAAAAAGT+AGG | - | chr1.4:18933325-18933344 | MS.gene061071:intron | 25.0% |
| ! | TATGAACTCTAATCAGATAT+TGG | - | chr1.4:18936490-18936509 | MS.gene061071:CDS | 25.0% |
| ! | TCAAATTGATGAACTATATG+AGG | - | chr1.4:18936567-18936586 | MS.gene061071:CDS | 25.0% |
| ! | TCTATAGCATAAACAACTTA+TGG | - | chr1.4:18932882-18932901 | MS.gene061071:intron | 25.0% |
| ! | TGAGACAACTTGAATAATAT+AGG | + | chr1.4:18935590-18935609 | None:intergenic | 25.0% |
| ! | TGTCTATTGACCAAATTATT+AGG | - | chr1.4:18933923-18933942 | MS.gene061071:intron | 25.0% |
| ! | TTCCTATTGGTATTCAAATT+AGG | - | chr1.4:18933707-18933726 | MS.gene061071:intron | 25.0% |
| ! | TTCTTAATAATGACACCTTT+GGG | + | chr1.4:18933880-18933899 | None:intergenic | 25.0% |
| ! | TTCTTTGTGTATTCAGATTT+GGG | - | chr1.4:18935889-18935908 | MS.gene061071:CDS | 25.0% |
| ! | TTGTAGTATTTCAGTAATTG+TGG | + | chr1.4:18936294-18936313 | None:intergenic | 25.0% |
| ! | TTTCTTTGTGTATTCAGATT+TGG | - | chr1.4:18935888-18935907 | MS.gene061071:CDS | 25.0% |
| !! | AACATTGAGTTTGAATTTTC+AGG | - | chr1.4:18932188-18932207 | MS.gene061071:CDS | 25.0% |
| !! | ACTATATGCTTTTCAAATGT+AGG | - | chr1.4:18934710-18934729 | MS.gene061071:intron | 25.0% |
| !! | TGTTTTCTTAATGTTCCATA+AGG | - | chr1.4:18932778-18932797 | MS.gene061071:CDS | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+TGG | + | chr1.4:18932680-18932699 | None:intergenic | 25.0% |
| !! | TTTTCTGTCAATGATTTTCA+TGG | + | chr1.4:18935691-18935710 | None:intergenic | 25.0% |
| !!! | ATATCTTAACTTGCTGTTAA+TGG | + | chr1.4:18934868-18934887 | None:intergenic | 25.0% |
| !!! | TAACATTTTGAAATCATTGC+AGG | - | chr1.4:18935636-18935655 | MS.gene061071:intron | 25.0% |
| !!! | TATTATTCAAGTTGTCTCAT+TGG | - | chr1.4:18935591-18935610 | MS.gene061071:intron | 25.0% |
| AAAGAACTAGAACATACTGA+TGG | + | chr1.4:18933178-18933197 | None:intergenic | 30.0% | |
| AACACAAGTCTATCAAAGAA+AGG | + | chr1.4:18934924-18934943 | None:intergenic | 30.0% | |
| AAGACAAAAAAGACATACCA+AGG | + | chr1.4:18932643-18932662 | None:intergenic | 30.0% | |
| ACAGCAAATCTTTATATTGC+GGG | - | chr1.4:18933577-18933596 | MS.gene061071:CDS | 30.0% | |
| AGACAAAAAAGACATACCAA+GGG | + | chr1.4:18932642-18932661 | None:intergenic | 30.0% | |
| AGATGTATTTATGCCAAAGA+TGG | - | chr1.4:18931631-18931650 | MS.gene061071:intron | 30.0% | |
| AGTCATAGTGTATTAGATTG+CGG | - | chr1.4:18933544-18933563 | MS.gene061071:intron | 30.0% | |
| AGTTTCAATTGCATTTGTAC+AGG | - | chr1.4:18933141-18933160 | MS.gene061071:intron | 30.0% | |
| ATACCAAGGGAATCATATAA+TGG | + | chr1.4:18932629-18932648 | None:intergenic | 30.0% | |
| ATTATCACAAGGATATGGTA+TGG | - | chr1.4:18935131-18935150 | MS.gene061071:intron | 30.0% | |
| CAAGTTAAGATATCTAGAGA+AGG | - | chr1.4:18934875-18934894 | MS.gene061071:intron | 30.0% | |
| CACAGCAAATCTTTATATTG+CGG | - | chr1.4:18933576-18933595 | MS.gene061071:CDS | 30.0% | |
| CTATCAAAACTTAGCAGAAT+AGG | + | chr1.4:18936120-18936139 | None:intergenic | 30.0% | |
| CTCCTAATTTGAATACCAAT+AGG | + | chr1.4:18933712-18933731 | None:intergenic | 30.0% | |
| GCATAAATACATCTATAGAC+AGG | + | chr1.4:18931625-18931644 | None:intergenic | 30.0% | |
| GGTCTCTTCAATTTAAATGT+TGG | + | chr1.4:18936273-18936292 | None:intergenic | 30.0% | |
| GTACATTATTGTGCAAATGT+CGG | + | chr1.4:18933836-18933855 | None:intergenic | 30.0% | |
| TATGATGTTTCCATCCAAAT+GGG | - | chr1.4:18932246-18932265 | MS.gene061071:intron | 30.0% | |
| TGATAGACTTGTGTTTGATA+AGG | - | chr1.4:18934929-18934948 | MS.gene061071:intron | 30.0% | |
| TGATTTATTCCTAGCAATTG+AGG | - | chr1.4:18935553-18935572 | MS.gene061071:intron | 30.0% | |
| TGTATTCAGATTTGGGTATA+TGG | - | chr1.4:18935896-18935915 | MS.gene061071:CDS | 30.0% | |
| TGTCTGTCAACCTAATAATT+TGG | + | chr1.4:18933936-18933955 | None:intergenic | 30.0% | |
| TTATATGTGAGCCATGAATA+AGG | + | chr1.4:18932219-18932238 | None:intergenic | 30.0% | |
| TTATGATGTTTCCATCCAAA+TGG | - | chr1.4:18932245-18932264 | MS.gene061071:intron | 30.0% | |
| ! | AAAGGCAAGACAATACATTT+TGG | - | chr1.4:18936033-18936052 | MS.gene061071:intron | 30.0% |
| ! | AACTTTTGTTCATGCTTAAC+AGG | - | chr1.4:18933082-18933101 | MS.gene061071:CDS | 30.0% |
| ! | AGCAAAAAAGTACATGTAAC+TGG | - | chr1.4:18932353-18932372 | MS.gene061071:intron | 30.0% |
| ! | CACAAAACTCTTTAGTGTTT+TGG | - | chr1.4:18934811-18934830 | MS.gene061071:intron | 30.0% |
| ! | CCTTTCTTTTCTGTTCTTTA+GGG | - | chr1.4:18933775-18933794 | MS.gene061071:CDS | 30.0% |
| ! | GAAGTTTTTATGGTTTCCTT+TGG | - | chr1.4:18931995-18932014 | MS.gene061071:intron | 30.0% |
| ! | GATTGACTTATTTGAGCTTA+TGG | + | chr1.4:18932966-18932985 | None:intergenic | 30.0% |
| ! | GCTTTGTTAATGTTTCCTTA+TGG | + | chr1.4:18932796-18932815 | None:intergenic | 30.0% |
| ! | TCCTTTCTTTTCTGTTCTTT+AGG | - | chr1.4:18933774-18933793 | MS.gene061071:CDS | 30.0% |
| ! | TCTTGTTTCCTTAACTAACT+TGG | - | chr1.4:18936413-18936432 | MS.gene061071:intron | 30.0% |
| ! | TGAACTCTTTTTGCAAAGTT+TGG | - | chr1.4:18934969-18934988 | MS.gene061071:intron | 30.0% |
| !! | ATAAAGATTTGCTGTGTAAC+CGG | + | chr1.4:18933572-18933591 | None:intergenic | 30.0% |
| !!! | AAACAGTTTTGAGTCATTCT+TGG | - | chr1.4:18935919-18935938 | MS.gene061071:CDS | 30.0% |
| AAAAGCAAAGTTTCATCTGC+TGG | - | chr1.4:18934737-18934756 | MS.gene061071:intron | 35.0% | |
| AAACAGAAATCCACTTACCT+TGG | - | chr1.4:18935842-18935861 | MS.gene061071:intron | 35.0% | |
| AAAGCAAAGTTTCATCTGCT+GGG | - | chr1.4:18934738-18934757 | MS.gene061071:intron | 35.0% | |
| AAGCATACCGATGATATAAG+AGG | + | chr1.4:18935786-18935805 | None:intergenic | 35.0% | |
| AAGGAACTGTTGAAAACTCA+CGG | + | chr1.4:18932301-18932320 | None:intergenic | 35.0% | |
| ACTCAAGAGGTTATAGTTGA+TGG | - | chr1.4:18935510-18935529 | MS.gene061071:intron | 35.0% | |
| AGAGAGAATGTTGAAAGAGA+AGG | + | chr1.4:18932320-18932339 | None:intergenic | 35.0% | |
| AGATAAGGACTCATAGAACA+TGG | + | chr1.4:18931913-18931932 | None:intergenic | 35.0% | |
| AGATCTCTCTCTATGTCAAA+GGG | + | chr1.4:18936243-18936262 | None:intergenic | 35.0% | |
| AGCATACCGATGATATAAGA+GGG | + | chr1.4:18935785-18935804 | None:intergenic | 35.0% | |
| ATACACTATGACTTACCAAC+TGG | + | chr1.4:18933537-18933556 | None:intergenic | 35.0% | |
| ATCAACTATTGAAGCAACCA+AGG | + | chr1.4:18935862-18935881 | None:intergenic | 35.0% | |
| ATGATAAACTCCACAGCATT+AGG | + | chr1.4:18933109-18933128 | None:intergenic | 35.0% | |
| ATGCAATTGAAACTTCTGCA+TGG | + | chr1.4:18933135-18933154 | None:intergenic | 35.0% | |
| CAACTATAACCTCTTGAGTA+AGG | + | chr1.4:18935509-18935528 | None:intergenic | 35.0% | |
| CACAACATAGCTCAATCAAT+TGG | - | chr1.4:18931838-18931857 | MS.gene061071:intron | 35.0% | |
| CATACCATCTCAAGAAGTTT+CGG | - | chr1.4:18933020-18933039 | MS.gene061071:CDS | 35.0% | |
| CCAATAGGAAGATGAAAACA+AGG | + | chr1.4:18933697-18933716 | None:intergenic | 35.0% | |
| CCCTAAAGAACAGAAAAGAA+AGG | + | chr1.4:18933778-18933797 | None:intergenic | 35.0% | |
| CTAATACGATCGAAAACTCT+AGG | + | chr1.4:18934573-18934592 | None:intergenic | 35.0% | |
| GAACTATATGAGGAAGCAAA+AGG | - | chr1.4:18936577-18936596 | MS.gene061071:CDS | 35.0% | |
| GGAACACCACAAAATATAGT+CGG | + | chr1.4:18934552-18934571 | None:intergenic | 35.0% | |
| GGTTTATACTGTGAAAGTTG+AGG | - | chr1.4:18931558-18931577 | MS.gene061071:CDS | 35.0% | |
| GTTCCATTATATGATTCCCT+TGG | - | chr1.4:18932623-18932642 | MS.gene061071:CDS | 35.0% | |
| TAGATCTCTCTCTATGTCAA+AGG | + | chr1.4:18936244-18936263 | None:intergenic | 35.0% | |
| TATACTGTGAAAGTTGAGGA+AGG | - | chr1.4:18931562-18931581 | MS.gene061071:CDS | 35.0% | |
| TCAAGACATGACAAAATCTG+TGG | + | chr1.4:18933300-18933319 | None:intergenic | 35.0% | |
| TCATGTATACGACCAGATAA+TGG | - | chr1.4:18934346-18934365 | MS.gene061071:CDS | 35.0% | |
| TCCACATTATCACAAGGATA+TGG | - | chr1.4:18935126-18935145 | MS.gene061071:intron | 35.0% | |
| TGCACAATAATGTACACAAG+TGG | - | chr1.4:18933841-18933860 | MS.gene061071:CDS | 35.0% | |
| TGGTATTCAAATTAGGAGCA+TGG | - | chr1.4:18933714-18933733 | MS.gene061071:intron | 35.0% | |
| TTATATTGTGGCCACAATTG+CGG | - | chr1.4:18933654-18933673 | MS.gene061071:intron | 35.0% | |
| TTCATGGCTCACATATAAAG+AGG | - | chr1.4:18932221-18932240 | MS.gene061071:CDS | 35.0% | |
| TTCTCTTTCAACATTCTCTC+TGG | - | chr1.4:18932319-18932338 | MS.gene061071:intron | 35.0% | |
| TTTACTCACAGTCCAGATTA+AGG | - | chr1.4:18933366-18933385 | MS.gene061071:CDS | 35.0% | |
| ! | AAGCATTGTATTCTGATGCA+TGG | + | chr1.4:18936467-18936486 | None:intergenic | 35.0% |
| ! | ACAGTTGATTTAGCCATGTT+TGG | - | chr1.4:18932664-18932683 | MS.gene061071:CDS | 35.0% |
| ! | ACCATATCCTTGTGATAATG+TGG | + | chr1.4:18935130-18935149 | None:intergenic | 35.0% |
| ! | ATGATTTTCATGGCTCCATT+TGG | + | chr1.4:18935681-18935700 | None:intergenic | 35.0% |
| ! | CTGAAACCGACTATATTTTG+TGG | - | chr1.4:18934543-18934562 | MS.gene061071:intron | 35.0% |
| ! | GCAGTTGAGCACAATTTTAA+TGG | - | chr1.4:18935983-18936002 | MS.gene061071:intron | 35.0% |
| ! | TCTTTAGGGAAGTTTGGATT+GGG | - | chr1.4:18933789-18933808 | MS.gene061071:CDS | 35.0% |
| ! | TTAGTCTTTGTGAGAGCTTA+TGG | + | chr1.4:18932926-18932945 | None:intergenic | 35.0% |
| ! | TTATGCCAAAGATGGTCTTA+TGG | - | chr1.4:18931639-18931658 | MS.gene061071:intron | 35.0% |
| ! | TTCTGTTCTTTAGGGAAGTT+TGG | - | chr1.4:18933783-18933802 | MS.gene061071:CDS | 35.0% |
| ! | TTCTTTAGGGAAGTTTGGAT+TGG | - | chr1.4:18933788-18933807 | MS.gene061071:CDS | 35.0% |
| ! | TTTTATGGTTTCCTTTGGCA+GGG | - | chr1.4:18932000-18932019 | MS.gene061071:intron | 35.0% |
| ! | TTTTTATGGTTTCCTTTGGC+AGG | - | chr1.4:18931999-18932018 | MS.gene061071:intron | 35.0% |
| !! | AACTTGCTGTTAATGGATTC+TGG | + | chr1.4:18934861-18934880 | None:intergenic | 35.0% |
| !! | AAGAGGTTATAGTTGATGGT+TGG | - | chr1.4:18935514-18935533 | MS.gene061071:intron | 35.0% |
| !! | TATTAGGTTGACAGACAAAG+TGG | - | chr1.4:18933939-18933958 | MS.gene061071:intron | 35.0% |
| !! | TTGAGTTTGAATTTTCAGGC+AGG | - | chr1.4:18932192-18932211 | MS.gene061071:CDS | 35.0% |
| !! | TTTTCTATGATGGGAACAGT+TGG | - | chr1.4:18935348-18935367 | MS.gene061071:intron | 35.0% |
| !!! | CAAATGTCGGTCTTCTTTTT+TGG | + | chr1.4:18933823-18933842 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTCATCTTCCTAT+TGG | - | chr1.4:18933694-18933713 | MS.gene061071:intron | 35.0% |
| AAACACTCCTCCACATGAAT+AGG | + | chr1.4:18935090-18935109 | None:intergenic | 40.0% | |
| AATGATCCATTCAGGACAGT+TGG | + | chr1.4:18932465-18932484 | None:intergenic | 40.0% | |
| AGGAACTGTTGAAAACTCAC+GGG | + | chr1.4:18932300-18932319 | None:intergenic | 40.0% | |
| AGTGGATCCACATTATCACA+AGG | - | chr1.4:18935120-18935139 | MS.gene061071:intron | 40.0% | |
| AGTGTATTAGATTGCGGTTC+CGG | - | chr1.4:18933550-18933569 | MS.gene061071:intron | 40.0% | |
| ATGAAACTCTCTCAGCTTAG+AGG | - | chr1.4:18936180-18936199 | MS.gene061071:intron | 40.0% | |
| ATGTACACAAGTGGAACAAC+TGG | - | chr1.4:18933850-18933869 | MS.gene061071:intron | 40.0% | |
| ATTGAAGCAACCAAGGTAAG+TGG | + | chr1.4:18935855-18935874 | None:intergenic | 40.0% | |
| ATTGACCTGAAGAAATCCCA+AGG | + | chr1.4:18931688-18931707 | None:intergenic | 40.0% | |
| ATTGGAGAATGGCAACCAAA+TGG | - | chr1.4:18935663-18935682 | MS.gene061071:intron | 40.0% | |
| CAACTCCATAAGACCATCTT+TGG | + | chr1.4:18931647-18931666 | None:intergenic | 40.0% | |
| CTTGAATCTGTACCAGAGAT+GGG | - | chr1.4:18935399-18935418 | MS.gene061071:intron | 40.0% | |
| CTTGTGATAACCAGAGAACA+AGG | + | chr1.4:18935478-18935497 | None:intergenic | 40.0% | |
| CTTTATTCTTGCAGGATGTC+AGG | - | chr1.4:18934496-18934515 | MS.gene061071:intron | 40.0% | |
| CTTTGCGAAAATTGCTTTGC+AGG | - | chr1.4:18936543-18936562 | MS.gene061071:CDS | 40.0% | |
| GAAATCATTGCAGGCGATAT+TGG | - | chr1.4:18935645-18935664 | MS.gene061071:intron | 40.0% | |
| GCAATGCCCTCTTATATCAT+CGG | - | chr1.4:18935776-18935795 | MS.gene061071:intron | 40.0% | |
| GCAGCTCAAAGCTATTTATC+TGG | - | chr1.4:18936209-18936228 | MS.gene061071:intron | 40.0% | |
| GCGTCAAAAACTCGATTCTA+AGG | - | chr1.4:18932063-18932082 | MS.gene061071:intron | 40.0% | |
| GTTGTAGCTATTGTGAGCTT+TGG | - | chr1.4:18933439-18933458 | MS.gene061071:intron | 40.0% | |
| TAACTGCAATTTCGACCACA+TGG | + | chr1.4:18933612-18933631 | None:intergenic | 40.0% | |
| TACATGAGCAAGAGGAAGAA+AGG | + | chr1.4:18934333-18934352 | None:intergenic | 40.0% | |
| TCCATTGCAATGATCCATTC+AGG | + | chr1.4:18932473-18932492 | None:intergenic | 40.0% | |
| TCCTGAATGGATCATTGCAA+TGG | - | chr1.4:18932469-18932488 | MS.gene061071:CDS | 40.0% | |
| TGAATGGATCATTGCAATGG+AGG | - | chr1.4:18932472-18932491 | MS.gene061071:CDS | 40.0% | |
| TGAGGAAGCAAAAGGAACAA+AGG | - | chr1.4:18936585-18936604 | MS.gene061071:CDS | 40.0% | |
| TTGACCTGAAGAAATCCCAA+GGG | + | chr1.4:18931687-18931706 | None:intergenic | 40.0% | |
| ! | GGCGATGTGTTTTCTATGAT+GGG | - | chr1.4:18935339-18935358 | MS.gene061071:intron | 40.0% |
| ! | GTTTTCGATCGTATTAGTGC+TGG | - | chr1.4:18934576-18934595 | MS.gene061071:intron | 40.0% |
| ! | TGTTTCTGCCACACAAAAGA+AGG | - | chr1.4:18933465-18933484 | MS.gene061071:intron | 40.0% |
| ! | TTGGATGAGCTTAAAAGCAC+TGG | - | chr1.4:18936052-18936071 | MS.gene061071:intron | 40.0% |
| !! | GTTGATGGTTGGTTTCATAC+AGG | - | chr1.4:18935525-18935544 | MS.gene061071:CDS | 40.0% |
| !! | TGTCTCATTGGCTCTAAATG+CGG | - | chr1.4:18935603-18935622 | MS.gene061071:intron | 40.0% |
| !!! | ATGTCGGTCTTCTTTTTTGG+TGG | + | chr1.4:18933820-18933839 | None:intergenic | 40.0% |
| !!! | CAGTTTTGAGTCATTCTTGG+TGG | - | chr1.4:18935922-18935941 | MS.gene061071:CDS | 40.0% |
| AAGAAGGAAGCCGAGGAATT+TGG | - | chr1.4:18933481-18933500 | MS.gene061071:intron | 45.0% | |
| AATTCCCATGACAACCATCG+AGG | - | chr1.4:18935371-18935390 | MS.gene061071:intron | 45.0% | |
| ACAGAAAGGCTCTTGAGGAT+TGG | - | chr1.4:18935960-18935979 | MS.gene061071:intron | 45.0% | |
| AGAACAAGGAGTTTCCTCTC+AGG | + | chr1.4:18935464-18935483 | None:intergenic | 45.0% | |
| AGAGGAAACTCCTTGTTCTC+TGG | - | chr1.4:18935465-18935484 | MS.gene061071:intron | 45.0% | |
| ATCCTCAAGAGCCTTTCTGT+CGG | + | chr1.4:18935960-18935979 | None:intergenic | 45.0% | |
| ATCTTCAAGGGATCCGCAAT+AGG | - | chr1.4:18934380-18934399 | MS.gene061071:intron | 45.0% | |
| CAGAAAGGCTCTTGAGGATT+GGG | - | chr1.4:18935961-18935980 | MS.gene061071:intron | 45.0% | |
| CTATAGACAGGTCCTACTGA+TGG | + | chr1.4:18931613-18931632 | None:intergenic | 45.0% | |
| CTCTCTATGTCAAAGGGAGT+TGG | + | chr1.4:18936237-18936256 | None:intergenic | 45.0% | |
| CTGTGAAAGTTGAGGAAGGA+AGG | - | chr1.4:18931566-18931585 | MS.gene061071:CDS | 45.0% | |
| CTTAACAGAATCCCTGCCAA+AGG | + | chr1.4:18932014-18932033 | None:intergenic | 45.0% | |
| CTTAACAGGTCCTAATGCTG+TGG | - | chr1.4:18933096-18933115 | MS.gene061071:CDS | 45.0% | |
| CTTCCAAGCATCTGGTTGTT+GGG | + | chr1.4:18932043-18932062 | None:intergenic | 45.0% | |
| GAGTGTTTGAGAGTCACTAG+TGG | - | chr1.4:18935102-18935121 | MS.gene061071:intron | 45.0% | |
| GCCTTGCCAAAATCCTATTG+CGG | + | chr1.4:18934396-18934415 | None:intergenic | 45.0% | |
| GCGACCTATTGCATCTTCAA+GGG | - | chr1.4:18934368-18934387 | MS.gene061071:intron | 45.0% | |
| GCTTGAATCTGTACCAGAGA+TGG | - | chr1.4:18935398-18935417 | MS.gene061071:intron | 45.0% | |
| GGAGATCACTGTGGCATATA+TGG | - | chr1.4:18932437-18932456 | MS.gene061071:CDS | 45.0% | |
| GGATCCCTTGAAGATGCAAT+AGG | + | chr1.4:18934375-18934394 | None:intergenic | 45.0% | |
| GTCTTACTGAAAGCTGTGCT+GGG | - | chr1.4:18935301-18935320 | MS.gene061071:intron | 45.0% | |
| GTGTCCGAAACTTCTTGAGA+TGG | + | chr1.4:18933027-18933046 | None:intergenic | 45.0% | |
| GTGTCTGAACATCTTCAAGC+AGG | + | chr1.4:18934524-18934543 | None:intergenic | 45.0% | |
| TAGACAAAACAAGCGCTAGG+TGG | - | chr1.4:18935027-18935046 | MS.gene061071:CDS | 45.0% | |
| TCACATGTGCCTCAATTGCT+AGG | + | chr1.4:18935565-18935584 | None:intergenic | 45.0% | |
| TCCTCCACATGAATAGGCAA+AGG | + | chr1.4:18935084-18935103 | None:intergenic | 45.0% | |
| TGACCTGAAGAAATCCCAAG+GGG | + | chr1.4:18931686-18931705 | None:intergenic | 45.0% | |
| TGCAATAGGTCGCCATTATC+TGG | + | chr1.4:18934361-18934380 | None:intergenic | 45.0% | |
| TGGTAGACAAAACAAGCGCT+AGG | - | chr1.4:18935024-18935043 | MS.gene061071:CDS | 45.0% | |
| TGGTCGTATACATGAGCAAG+AGG | + | chr1.4:18934341-18934360 | None:intergenic | 45.0% | |
| TGTTACTAGGGAGATCACTG+TGG | - | chr1.4:18932428-18932447 | MS.gene061071:CDS | 45.0% | |
| TTCAGGCAGGACCTTATTCA+TGG | - | chr1.4:18932205-18932224 | MS.gene061071:CDS | 45.0% | |
| TTCCAAGCATCTGGTTGTTG+GGG | + | chr1.4:18932042-18932061 | None:intergenic | 45.0% | |
| TTGCAGGCGATATTGGAGAA+TGG | - | chr1.4:18935652-18935671 | MS.gene061071:intron | 45.0% | |
| TTGGCAGGGATTCTGTTAAG+AGG | - | chr1.4:18932014-18932033 | MS.gene061071:intron | 45.0% | |
| ! | AGGGATCCGCAATAGGATTT+TGG | - | chr1.4:18934387-18934406 | MS.gene061071:intron | 45.0% |
| ! | CGGCGATGTGTTTTCTATGA+TGG | - | chr1.4:18935338-18935357 | MS.gene061071:intron | 45.0% |
| !! | AAAGGTGCTGCTTTGTGTTG+TGG | + | chr1.4:18934906-18934925 | None:intergenic | 45.0% |
| !! | TCCGCAATAGGATTTTGGCA+AGG | - | chr1.4:18934392-18934411 | MS.gene061071:intron | 45.0% |
| !! | TTCTGGTTTAGAGTCCCCTT+GGG | - | chr1.4:18931669-18931688 | MS.gene061071:intron | 45.0% |
| AATTTCTCCACGTGGCTCAC+TGG | + | chr1.4:18935439-18935458 | None:intergenic | 50.0% | |
| AGTCCCCTTGGGATTTCTTC+AGG | - | chr1.4:18931680-18931699 | MS.gene061071:intron | 50.0% | |
| AGTGCGTCATATCCCATCTC+TGG | + | chr1.4:18935414-18935433 | None:intergenic | 50.0% | |
| CAAGGGGACTCTAAACCAGA+AGG | + | chr1.4:18931670-18931689 | None:intergenic | 50.0% | |
| CACACAAAAGAAGGAAGCCG+AGG | - | chr1.4:18933474-18933493 | MS.gene061071:intron | 50.0% | |
| CCAACAACCAGATGCTTGGA+AGG | - | chr1.4:18932041-18932060 | MS.gene061071:intron | 50.0% | |
| CCTTCCAAGCATCTGGTTGT+TGG | + | chr1.4:18932044-18932063 | None:intergenic | 50.0% | |
| CGCGTTCGTATCCTGTTATC+CGG | - | chr1.4:18935051-18935070 | MS.gene061071:intron | 50.0% | |
| CGTGGAGAAATTTGCCTGAG+AGG | - | chr1.4:18935447-18935466 | MS.gene061071:intron | 50.0% | |
| CTCAGGCAAATTTCTCCACG+TGG | + | chr1.4:18935447-18935466 | None:intergenic | 50.0% | |
| CTCTGGTACAGATTCAAGCC+TGG | + | chr1.4:18935397-18935416 | None:intergenic | 50.0% | |
| GCAGGATGTGCCAAATTCCT+CGG | + | chr1.4:18933494-18933513 | None:intergenic | 50.0% | |
| GCCTTTGCCTATTCATGTGG+AGG | - | chr1.4:18935080-18935099 | MS.gene061071:intron | 50.0% | |
| GCGACAAGACCTTACTCAAG+AGG | - | chr1.4:18935497-18935516 | MS.gene061071:intron | 50.0% | |
| GCTGGGTGTTTCACAGCAAT+CGG | - | chr1.4:18935318-18935337 | MS.gene061071:intron | 50.0% | |
| GGAACAACTGGAGAACCCAA+AGG | - | chr1.4:18933862-18933881 | MS.gene061071:intron | 50.0% | |
| GGCGACCTATTGCATCTTCA+AGG | - | chr1.4:18934367-18934386 | MS.gene061071:intron | 50.0% | |
| GGTCTTACTGAAAGCTGTGC+TGG | - | chr1.4:18935300-18935319 | MS.gene061071:intron | 50.0% | |
| TCCTCAAGAGCCTTTCTGTC+GGG | + | chr1.4:18935959-18935978 | None:intergenic | 50.0% | |
| TCTGATGGAAGGCCATCAGT+AGG | - | chr1.4:18931598-18931617 | MS.gene061071:intron | 50.0% | |
| TGCGCCTTTGCCTATTCATG+TGG | - | chr1.4:18935077-18935096 | MS.gene061071:intron | 50.0% | |
| TGCGGGAATATACGACCATG+TGG | - | chr1.4:18933594-18933613 | MS.gene061071:CDS | 50.0% | |
| TTCTCATGGCTGAGCCCATT+TGG | + | chr1.4:18932263-18932282 | None:intergenic | 50.0% | |
| TTTGACGCCTTCCAAGCATC+TGG | + | chr1.4:18932051-18932070 | None:intergenic | 50.0% | |
| ! | ATGGTGCCAACTGTCCTGAA+TGG | - | chr1.4:18932456-18932475 | MS.gene061071:CDS | 50.0% |
| ! | CTCGGCTTCCTTCTTTTGTG+TGG | + | chr1.4:18933476-18933495 | None:intergenic | 50.0% |
| ! | GGTCTTATGGAGTTGCCTTC+TGG | - | chr1.4:18931652-18931671 | MS.gene061071:intron | 50.0% |
| ! | TGAGTCATTCTTGGTGGCTG+TGG | - | chr1.4:18935928-18935947 | MS.gene061071:CDS | 50.0% |
| !! | CTTCTGGTTTAGAGTCCCCT+TGG | - | chr1.4:18931668-18931687 | MS.gene061071:intron | 50.0% |
| AAACTCTCCCCAGGAGAAGC+AGG | + | chr1.4:18933512-18933531 | None:intergenic | 55.0% | |
| AACTCACGGGATTGACGCCA+CGG | + | chr1.4:18932287-18932306 | None:intergenic | 55.0% | |
| AGATTCAAGCCTGGCCTCGA+TGG | + | chr1.4:18935388-18935407 | None:intergenic | 55.0% | |
| AGCCCCAACAACCAGATGCT+TGG | - | chr1.4:18932037-18932056 | MS.gene061071:intron | 55.0% | |
| ATTGACGCCACGGCTTCTCA+TGG | + | chr1.4:18932277-18932296 | None:intergenic | 55.0% | |
| CAACTGGAGAAACTCTCCCC+AGG | + | chr1.4:18933521-18933540 | None:intergenic | 55.0% | |
| CATGGCTGAGCCCATTTGGA+TGG | + | chr1.4:18932259-18932278 | None:intergenic | 55.0% | |
| CCTCAAGAGCCTTTCTGTCG+GGG | + | chr1.4:18935958-18935977 | None:intergenic | 55.0% | |
| CTGGCCTCGATGGTTGTCAT+GGG | + | chr1.4:18935378-18935397 | None:intergenic | 55.0% | |
| CTGGGGAGAGTTTCTCCAGT+TGG | - | chr1.4:18933519-18933538 | MS.gene061071:intron | 55.0% | |
| GGAAGGCCTGCTACATCTGA+TGG | - | chr1.4:18931583-18931602 | MS.gene061071:intron | 55.0% | |
| GGCCTGCTACATCTGATGGA+AGG | - | chr1.4:18931587-18931606 | MS.gene061071:intron | 55.0% | |
| GGCCTTCCATCAGATGTAGC+AGG | + | chr1.4:18931592-18931611 | None:intergenic | 55.0% | |
| TGGCACATCCTGCTTCTCCT+GGG | - | chr1.4:18933501-18933520 | MS.gene061071:intron | 55.0% | |
| TGTGGTAGTCCCCGACAGAA+AGG | - | chr1.4:18935946-18935965 | MS.gene061071:intron | 55.0% | |
| TTAGTCCGCAGCCGCAATTG+TGG | + | chr1.4:18933668-18933687 | None:intergenic | 55.0% | |
| TTGGCACATCCTGCTTCTCC+TGG | - | chr1.4:18933500-18933519 | MS.gene061071:intron | 55.0% | |
| ! | AATAGGCAAAGGCGCAGCTC+CGG | + | chr1.4:18935073-18935092 | None:intergenic | 55.0% |
| AAGGCGCAGCTCCGGATAAC+AGG | + | chr1.4:18935065-18935084 | None:intergenic | 60.0% | |
| CCATGACAACCATCGAGGCC+AGG | - | chr1.4:18935376-18935395 | MS.gene061071:intron | 60.0% | |
| CCCCGACAGAAAGGCTCTTG+AGG | - | chr1.4:18935955-18935974 | MS.gene061071:intron | 60.0% | |
| CCTGGCCTCGATGGTTGTCA+TGG | + | chr1.4:18935379-18935398 | None:intergenic | 60.0% | |
| GCACTTTCCAGTGAGCCACG+TGG | - | chr1.4:18935429-18935448 | MS.gene061071:intron | 60.0% | |
| GGCACATCCTGCTTCTCCTG+GGG | - | chr1.4:18933502-18933521 | MS.gene061071:intron | 60.0% | |
| TGTGGCCACAATTGCGGCTG+CGG | - | chr1.4:18933660-18933679 | MS.gene061071:intron | 60.0% | |
| GGCTCAGCCATGAGAAGCCG+TGG | - | chr1.4:18932267-18932286 | MS.gene061071:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 18931550 | 18936612 | 18931550 | ID=MS.gene061071 |
| chr1.4 | mRNA | 18931550 | 18936612 | 18931550 | ID=MS.gene061071.t1;Parent=MS.gene061071 |
| chr1.4 | exon | 18936461 | 18936612 | 18936461 | ID=MS.gene061071.t1.exon1;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18936461 | 18936612 | 18936461 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18936078 | 18936141 | 18936078 | ID=MS.gene061071.t1.exon2;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18936078 | 18936141 | 18936078 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18935863 | 18935952 | 18935863 | ID=MS.gene061071.t1.exon3;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18935863 | 18935952 | 18935863 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18935669 | 18935725 | 18935669 | ID=MS.gene061071.t1.exon4;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18935669 | 18935725 | 18935669 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18935518 | 18935566 | 18935518 | ID=MS.gene061071.t1.exon5;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18935518 | 18935566 | 18935518 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18934982 | 18935058 | 18934982 | ID=MS.gene061071.t1.exon6;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18934982 | 18935058 | 18934982 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18934820 | 18934859 | 18934820 | ID=MS.gene061071.t1.exon7;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18934820 | 18934859 | 18934820 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18934622 | 18934716 | 18934622 | ID=MS.gene061071.t1.exon8;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18934622 | 18934716 | 18934622 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18934202 | 18934366 | 18934202 | ID=MS.gene061071.t1.exon9;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18934202 | 18934366 | 18934202 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18933747 | 18933863 | 18933747 | ID=MS.gene061071.t1.exon10;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18933747 | 18933863 | 18933747 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18933565 | 18933652 | 18933565 | ID=MS.gene061071.t1.exon11;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18933565 | 18933652 | 18933565 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18933364 | 18933430 | 18933364 | ID=MS.gene061071.t1.exon12;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18933364 | 18933430 | 18933364 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18933212 | 18933287 | 18933212 | ID=MS.gene061071.t1.exon13;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18933212 | 18933287 | 18933212 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18933015 | 18933132 | 18933015 | ID=MS.gene061071.t1.exon14;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18933015 | 18933132 | 18933015 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18932616 | 18932861 | 18932616 | ID=MS.gene061071.t1.exon15;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18932616 | 18932861 | 18932616 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18932365 | 18932504 | 18932365 | ID=MS.gene061071.t1.exon16;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18932365 | 18932504 | 18932365 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18932075 | 18932257 | 18932075 | ID=MS.gene061071.t1.exon17;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18932075 | 18932257 | 18932075 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18931848 | 18931967 | 18931848 | ID=MS.gene061071.t1.exon18;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18931848 | 18931967 | 18931848 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| chr1.4 | exon | 18931550 | 18931597 | 18931550 | ID=MS.gene061071.t1.exon19;Parent=MS.gene061071.t1 |
| chr1.4 | CDS | 18931550 | 18931597 | 18931550 | ID=cds.MS.gene061071.t1;Parent=MS.gene061071.t1 |
| Gene Sequence |
| Protein sequence |
