Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33613.t1 | XP_013466478.1 | 98.8 | 328 | 4 | 0 | 1 | 328 | 1 | 328 | 6.90E-188 | 666.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33613.t1 | Q9XHZ8 | 71.6 | 328 | 89 | 1 | 1 | 328 | 1 | 324 | 2.3e-139 | 496.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33613.t1 | A0A072VES8 | 98.8 | 328 | 4 | 0 | 1 | 328 | 1 | 328 | 5.0e-188 | 666.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene33613.t1 | TR | TRAF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene33613 | MS.gene93783 | PPI |
| MS.gene33613 | MS.gene55382 | PPI |
| MS.gene33613 | MS.gene99693 | PPI |
| MS.gene33613 | MS.gene62620 | PPI |
| MS.gene33613 | MS.gene040151 | PPI |
| MS.gene33613 | MS.gene53169 | PPI |
| MS.gene33613 | MS.gene95889 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33613.t1 | MTR_1g029850 | 98.780 | 328 | 4 | 0 | 1 | 328 | 1 | 328 | 0.0 | 675 |
| MS.gene33613.t1 | MTR_3g088560 | 72.866 | 328 | 82 | 4 | 1 | 326 | 1 | 323 | 4.70e-176 | 491 |
| MS.gene33613.t1 | MTR_3g088560 | 72.917 | 240 | 63 | 2 | 89 | 326 | 14 | 253 | 1.04e-124 | 358 |
| MS.gene33613.t1 | MTR_3g088560 | 68.421 | 266 | 78 | 4 | 63 | 326 | 7 | 268 | 8.79e-124 | 356 |
| MS.gene33613.t1 | MTR_3g061090 | 50.755 | 331 | 157 | 3 | 1 | 328 | 1 | 328 | 1.95e-119 | 347 |
| MS.gene33613.t1 | MTR_3g088560 | 72.637 | 201 | 53 | 2 | 128 | 326 | 1 | 201 | 7.24e-102 | 298 |
| MS.gene33613.t1 | MTR_5g096700 | 44.615 | 325 | 175 | 3 | 5 | 328 | 9 | 329 | 4.18e-98 | 293 |
| MS.gene33613.t1 | MTR_3g061090 | 48.425 | 254 | 130 | 1 | 76 | 328 | 3 | 256 | 1.58e-82 | 251 |
| MS.gene33613.t1 | MTR_5g096700 | 42.125 | 273 | 153 | 3 | 57 | 328 | 2 | 270 | 5.22e-72 | 224 |
| MS.gene33613.t1 | MTR_5g096790 | 34.234 | 333 | 189 | 9 | 5 | 324 | 7 | 322 | 2.81e-55 | 183 |
| MS.gene33613.t1 | MTR_7g094490 | 23.567 | 314 | 194 | 8 | 14 | 291 | 41 | 344 | 6.40e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene33613.t1 | AT1G21780 | 71.646 | 328 | 89 | 1 | 1 | 328 | 1 | 324 | 0.0 | 506 |
| MS.gene33613.t1 | AT1G21780 | 71.646 | 328 | 89 | 1 | 1 | 328 | 1 | 324 | 0.0 | 506 |
| MS.gene33613.t1 | AT1G55760 | 47.892 | 332 | 164 | 5 | 1 | 328 | 1 | 327 | 1.49e-109 | 322 |
| MS.gene33613.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 5.33e-13 | 69.3 |
| MS.gene33613.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 5.77e-13 | 69.3 |
| MS.gene33613.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 5.77e-13 | 69.3 |
| MS.gene33613.t1 | AT2G39760 | 30.719 | 153 | 95 | 1 | 150 | 291 | 179 | 331 | 1.10e-12 | 68.6 |
Find 73 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCCTTTCAAACTTGGTATT+TGG | 0.128764 | 1.1:+15725238 | MS.gene33613:CDS |
| CGCAACCTCTCCTGTGTTTC+AGG | 0.153472 | 1.1:+15728196 | MS.gene33613:CDS |
| CAATAAAACCCGAAGATTTC+TGG | 0.200729 | 1.1:+15728321 | MS.gene33613:CDS |
| AGTGCTTACGATTTGGAAAT+AGG | 0.233751 | 1.1:+15728610 | MS.gene33613:CDS |
| TGAACCTTCGCGTGTTTCTA+AGG | 0.294946 | 1.1:+15725396 | MS.gene33613:CDS |
| AATTAGAGACTCACATTTAG+AGG | 0.296472 | 1.1:-15727757 | None:intergenic |
| TTTGCATTCTTGTTTGATTT+CGG | 0.309873 | 1.1:+15728506 | MS.gene33613:CDS |
| CTGTGCTTCCAGAAATCTTC+GGG | 0.311859 | 1.1:-15728329 | None:intergenic |
| TTCAAGAAGTGCTTACGATT+TGG | 0.314099 | 1.1:+15728603 | MS.gene33613:CDS |
| TTAGAAACACGCGAAGGTTC+AGG | 0.373550 | 1.1:-15725394 | None:intergenic |
| TGTACCATCTGCGGTTATAA+TGG | 0.375371 | 1.1:-15728147 | None:intergenic |
| AGAAGAAGAAGAAGCAGTAT+TGG | 0.384918 | 1.1:-15725455 | None:intergenic |
| TCAAACTTGGTATTTGGAAC+TGG | 0.400132 | 1.1:+15725244 | MS.gene33613:CDS |
| CAATTTCCCGATTAGCTCAA+TGG | 0.401221 | 1.1:+15725175 | MS.gene33613:CDS |
| AAATCAGACCCTTTCAAACT+TGG | 0.408826 | 1.1:+15725231 | MS.gene33613:CDS |
| CGAAGAATGAAACGAGCAAT+AGG | 0.409761 | 1.1:-15725427 | None:intergenic |
| CCTGTGCTTCCAGAAATCTT+CGG | 0.410951 | 1.1:-15728330 | None:intergenic |
| CTTTCTTCAACTTGTGCAGC+TGG | 0.413291 | 1.1:-15728478 | None:intergenic |
| ATTTGTCGATAGAGAGAAAC+AGG | 0.424241 | 1.1:+15725350 | MS.gene33613:CDS |
| AAGCACAGGCTGGCATTGCT+TGG | 0.427569 | 1.1:+15728344 | MS.gene33613:CDS |
| GAACCTGTGATGACTTTGTC+TGG | 0.430022 | 1.1:+15727668 | MS.gene33613:CDS |
| AGGGGAAATGTAAAATTTGC+GGG | 0.434591 | 1.1:-15725482 | None:intergenic |
| TTCCAAATACCAAGTTTGAA+AGG | 0.463827 | 1.1:-15725240 | None:intergenic |
| TGATACGAGGCCTGAAACAC+AGG | 0.468973 | 1.1:-15728206 | None:intergenic |
| TCCAAATACCAAGTTTGAAA+GGG | 0.471833 | 1.1:-15725239 | None:intergenic |
| ATCAGATGGCCATATGGAAC+TGG | 0.472723 | 1.1:-15728042 | None:intergenic |
| TGCAGACCGGGAGCTCATGC+TGG | 0.475204 | 1.1:+15728574 | MS.gene33613:CDS |
| AACCGCAGATGGTACACTTA+AGG | 0.477023 | 1.1:+15728154 | MS.gene33613:CDS |
| TCGATAGGCTTAATGAGGCC+TGG | 0.483089 | 1.1:+15728450 | MS.gene33613:CDS |
| CCTGTGGATACTACATTCCT+TGG | 0.490016 | 1.1:+15727691 | MS.gene33613:CDS |
| GTATCTCAGAAGGGCCGTGC+AGG | 0.498716 | 1.1:-15728288 | None:intergenic |
| CCGAGTTAAGATCTTCAAGT+AGG | 0.498960 | 1.1:-15728418 | None:intergenic |
| ACATCTCCAGCATGAGCTCC+CGG | 0.506500 | 1.1:-15728580 | None:intergenic |
| CAAGCATACGAGAGAGGCAT+CGG | 0.514573 | 1.1:-15728100 | None:intergenic |
| CAATGGAAAATCGACAACTT+TGG | 0.515182 | 1.1:+15725192 | MS.gene33613:CDS |
| CTTGTGACATGTCTTCTATG+TGG | 0.517852 | 1.1:-15728262 | None:intergenic |
| CAGGGGAAATGTAAAATTTG+CGG | 0.522009 | 1.1:-15725483 | None:intergenic |
| CCTACTTGAAGATCTTAACT+CGG | 0.524632 | 1.1:+15728418 | MS.gene33613:CDS |
| CCGAAGATTTCTGGAAGCAC+AGG | 0.532000 | 1.1:+15728330 | MS.gene33613:CDS |
| TTCCATACATGTATCTCAGA+AGG | 0.534119 | 1.1:-15728298 | None:intergenic |
| GTGGAGAAGCCAGTTCCATA+TGG | 0.542653 | 1.1:+15728033 | MS.gene33613:CDS |
| AGAGACTCACATTTAGAGGA+TGG | 0.543830 | 1.1:-15727753 | None:intergenic |
| CTGAAACACAGGAGAGGTTG+CGG | 0.553064 | 1.1:-15728195 | None:intergenic |
| CAGCTGCACAAGTTGAAGAA+AGG | 0.554405 | 1.1:+15728479 | MS.gene33613:CDS |
| GCCCTTCTGAGATACATGTA+TGG | 0.555410 | 1.1:+15728296 | MS.gene33613:CDS |
| CATTTAGAGGATGGATCTTG+AGG | 0.558322 | 1.1:-15727744 | None:intergenic |
| ACAAAACATGGGAGATTCGA+AGG | 0.560639 | 1.1:+15725146 | None:intergenic |
| AGTTCCATATGGCCATCTGA+TGG | 0.561027 | 1.1:+15728044 | MS.gene33613:CDS |
| AGATTTCTGGAAGCACAGGC+TGG | 0.562698 | 1.1:+15728334 | MS.gene33613:CDS |
| ACTCGGGAAATGTTCTCGAT+AGG | 0.565741 | 1.1:+15728435 | MS.gene33613:CDS |
| TGATGACTTTGTCTGGCCTG+TGG | 0.574666 | 1.1:+15727675 | MS.gene33613:CDS |
| GTAATGCGACAGTTCATGAA+AGG | 0.579563 | 1.1:+15727638 | MS.gene33613:intron |
| TAATGCGACAGTTCATGAAA+GGG | 0.580340 | 1.1:+15727639 | MS.gene33613:intron |
| CATCAATAATCAAGCGACCA+AGG | 0.591316 | 1.1:-15727708 | None:intergenic |
| CTTGTGCAGCTGGTACAACC+AGG | 0.594842 | 1.1:-15728468 | None:intergenic |
| CTACTTGAAGATCTTAACTC+GGG | 0.596940 | 1.1:+15728419 | MS.gene33613:CDS |
| CCAAGGAATGTAGTATCCAC+AGG | 0.598731 | 1.1:-15727691 | None:intergenic |
| CTCACCATTATAACCGCAGA+TGG | 0.600207 | 1.1:+15728143 | MS.gene33613:CDS |
| TGATCTCAAAGACGCATGCG+AGG | 0.608738 | 1.1:+15728391 | MS.gene33613:CDS |
| TGTTCTCGATAGGCTTAATG+AGG | 0.616503 | 1.1:+15728445 | MS.gene33613:CDS |
| TTCGCTGCTGTTGTGATACG+AGG | 0.621280 | 1.1:-15728219 | None:intergenic |
| AGGCCAGACAAAGTCATCAC+AGG | 0.625083 | 1.1:-15727671 | None:intergenic |
| TCTGATTTCTTGTAAGAACA+AGG | 0.625303 | 1.1:-15725216 | None:intergenic |
| AGAATGAAACGAGCAATAGG+AGG | 0.635724 | 1.1:-15725424 | None:intergenic |
| CTTCGTCAAGCATACGAGAG+AGG | 0.638028 | 1.1:-15728106 | None:intergenic |
| TCCATACATGTATCTCAGAA+GGG | 0.640688 | 1.1:-15728297 | None:intergenic |
| AGCCTTAAGTGTACCATCTG+CGG | 0.641897 | 1.1:-15728156 | None:intergenic |
| CATCTGCGGTTATAATGGTG+AGG | 0.675837 | 1.1:-15728142 | None:intergenic |
| GCAGCTAATAAATACGACAT+CGG | 0.699343 | 1.1:+15728368 | MS.gene33613:CDS |
| CGAGGCCTGAAACACAGGAG+AGG | 0.710966 | 1.1:-15728201 | None:intergenic |
| CATGTCACAAGAATCCTGCA+CGG | 0.721067 | 1.1:+15728274 | MS.gene33613:CDS |
| GGAAATGTAAAATTTGCGGG+AGG | 0.721522 | 1.1:-15725479 | None:intergenic |
| TGTTCCTTAGAAACACGCGA+AGG | 0.729696 | 1.1:-15725400 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTATATGTCAATT+TGG | + | chr1.1:15725954-15725973 | MS.gene33613:intron | 10.0% |
| !! | AATTCTACTAATAAAATTCA+AGG | - | chr1.1:15725984-15726003 | None:intergenic | 15.0% |
| !! | ATAAAAAAAACTACAATGTT+GGG | - | chr1.1:15727313-15727332 | None:intergenic | 15.0% |
| !!! | ACTTATTTTTTGCAAATTTA+AGG | - | chr1.1:15727543-15727562 | None:intergenic | 15.0% |
| !!! | ATTATACTATGTTGAATTTT+TGG | + | chr1.1:15725295-15725314 | MS.gene33613:intron | 15.0% |
| !!! | CTTTTGTTAATAAAAAGTTT+AGG | + | chr1.1:15726013-15726032 | MS.gene33613:intron | 15.0% |
| !!! | TTATACTATGTTGAATTTTT+GGG | + | chr1.1:15725296-15725315 | MS.gene33613:intron | 15.0% |
| !! | AAATTTAGTAAACAAAAGAG+AGG | - | chr1.1:15727474-15727493 | None:intergenic | 20.0% |
| !! | AATTTAGTAAACAAAAGAGA+GGG | - | chr1.1:15727473-15727492 | None:intergenic | 20.0% |
| !! | ACAAATAGATAGTTATAGAA+CGG | - | chr1.1:15727869-15727888 | None:intergenic | 20.0% |
| !! | CAGATATTATAATCATCAAA+CGG | - | chr1.1:15725816-15725835 | None:intergenic | 20.0% |
| !! | GATAAAAAAAACTACAATGT+TGG | - | chr1.1:15727314-15727333 | None:intergenic | 20.0% |
| !! | GCTATATTTAAATAGAGAAT+TGG | + | chr1.1:15727236-15727255 | MS.gene33613:intron | 20.0% |
| !! | GTAAGATCTAAACAATATTA+TGG | - | chr1.1:15726932-15726951 | None:intergenic | 20.0% |
| !! | TGATGTAACTAGATATAATA+TGG | + | chr1.1:15727816-15727835 | MS.gene33613:intron | 20.0% |
| !!! | ACTTGTGATTTTCAATTTAT+GGG | + | chr1.1:15726231-15726250 | MS.gene33613:intron | 20.0% |
| !!! | ATAAATTTTGAGAACTAGAT+TGG | + | chr1.1:15726270-15726289 | MS.gene33613:intron | 20.0% |
| ! | AAAAGGAAAGACAATAAAAC+AGG | - | chr1.1:15726318-15726337 | None:intergenic | 25.0% |
| ! | AATAAAAAGTTTAGGTGAGT+TGG | + | chr1.1:15726021-15726040 | MS.gene33613:intron | 25.0% |
| ! | AATGATAGTTTACTGAATGA+AGG | + | chr1.1:15726182-15726201 | MS.gene33613:intron | 25.0% |
| ! | AATTAAGGGTTCTTATTGTA+GGG | + | chr1.1:15726463-15726482 | MS.gene33613:intron | 25.0% |
| ! | AGAGTAAAGTGTGATAATTA+AGG | + | chr1.1:15726448-15726467 | MS.gene33613:intron | 25.0% |
| ! | ATAAAAAGTTTAGGTGAGTT+GGG | + | chr1.1:15726022-15726041 | MS.gene33613:intron | 25.0% |
| ! | ATAAATTAAGCTGCACATAA+AGG | + | chr1.1:15726999-15727018 | MS.gene33613:intron | 25.0% |
| ! | ATTATAATATCTGTTCGTCT+TGG | + | chr1.1:15725823-15725842 | MS.gene33613:intron | 25.0% |
| ! | ATTCAGTAAACTATCATTAG+TGG | - | chr1.1:15726180-15726199 | None:intergenic | 25.0% |
| ! | GAGTAAAGTGTGATAATTAA+GGG | + | chr1.1:15726449-15726468 | MS.gene33613:intron | 25.0% |
| ! | GATTGTTAACATACAACAAT+AGG | - | chr1.1:15726718-15726737 | None:intergenic | 25.0% |
| ! | GTATTACAAAAAAATGCTTC+TGG | + | chr1.1:15726813-15726832 | MS.gene33613:intron | 25.0% |
| ! | TAAATTAAGCTGCACATAAA+GGG | + | chr1.1:15727000-15727019 | MS.gene33613:intron | 25.0% |
| ! | TAATTAAGGGTTCTTATTGT+AGG | + | chr1.1:15726462-15726481 | MS.gene33613:intron | 25.0% |
| ! | TATATCTATAAATCCAAGAC+AGG | - | chr1.1:15727436-15727455 | None:intergenic | 25.0% |
| ! | TTGAAATTTCGATACATTGA+GGG | + | chr1.1:15725742-15725761 | MS.gene33613:intron | 25.0% |
| !! | GACTTGTGATTTTCAATTTA+TGG | + | chr1.1:15726230-15726249 | MS.gene33613:intron | 25.0% |
| !! | TATTGAATGGAATGCATTTT+AGG | + | chr1.1:15726670-15726689 | MS.gene33613:intron | 25.0% |
| !! | TTTGAAATTTCGATACATTG+AGG | + | chr1.1:15725741-15725760 | MS.gene33613:intron | 25.0% |
| !! | TTTGCATTCTTGTTTGATTT+CGG | + | chr1.1:15728506-15728525 | MS.gene33613:CDS | 25.0% |
| !!! | AATCACTATTTTGATCATTG+GGG | + | chr1.1:15725592-15725611 | MS.gene33613:intron | 25.0% |
| !!! | ATTAGCTCTGTATTTATTGT+TGG | - | chr1.1:15727505-15727524 | None:intergenic | 25.0% |
| !!! | ATTGTTTTGAGTTACTTAAC+AGG | + | chr1.1:15727904-15727923 | MS.gene33613:intron | 25.0% |
| !!! | GAATCACTATTTTGATCATT+GGG | + | chr1.1:15725591-15725610 | MS.gene33613:intron | 25.0% |
| !!! | TGAATCACTATTTTGATCAT+TGG | + | chr1.1:15725590-15725609 | MS.gene33613:intron | 25.0% |
| !!! | TGAATGAAGGTTTTTTATGA+CGG | + | chr1.1:15726195-15726214 | MS.gene33613:intron | 25.0% |
| !!! | TTTACTATGTTGTTGTTTTC+AGG | + | chr1.1:15725326-15725345 | MS.gene33613:intron | 25.0% |
| !!! | TTTAGATTATTTTTCCCCAT+TGG | + | chr1.1:15726497-15726516 | MS.gene33613:intron | 25.0% |
| AACATTATCCCTTTCAAACA+CGG | - | chr1.1:15726398-15726417 | None:intergenic | 30.0% | |
| AAGAGATAACATACTAACCA+GGG | - | chr1.1:15725504-15725523 | None:intergenic | 30.0% | |
| AAGTCTTAGTATCAAGCAAA+AGG | - | chr1.1:15726335-15726354 | None:intergenic | 30.0% | |
| AATTAGAGACTCACATTTAG+AGG | - | chr1.1:15727760-15727779 | None:intergenic | 30.0% | |
| ACAATTTAACACTAGTTCAG+AGG | - | chr1.1:15727974-15727993 | None:intergenic | 30.0% | |
| ACCAAAAAAAGAAGTTTCTG+CGG | + | chr1.1:15727334-15727353 | MS.gene33613:intron | 30.0% | |
| ACTAAGGAAATACTCAAGAA+GGG | + | chr1.1:15726541-15726560 | MS.gene33613:intron | 30.0% | |
| ATTTCCTTAGTATCGTAGTA+AGG | - | chr1.1:15726532-15726551 | None:intergenic | 30.0% | |
| CTAACTCATCTTTACAAAAC+CGG | - | chr1.1:15725927-15725946 | None:intergenic | 30.0% | |
| GATACATTGAAGAACTATTG+TGG | - | chr1.1:15725655-15725674 | None:intergenic | 30.0% | |
| GTTTGAAAGGGATAATGTTT+GGG | + | chr1.1:15726399-15726418 | MS.gene33613:intron | 30.0% | |
| TAAGAGATAACATACTAACC+AGG | - | chr1.1:15725505-15725524 | None:intergenic | 30.0% | |
| TACTAAGGAAATACTCAAGA+AGG | + | chr1.1:15726540-15726559 | MS.gene33613:intron | 30.0% | |
| TCACTAGATAGATCTACAAT+TGG | - | chr1.1:15727413-15727432 | None:intergenic | 30.0% | |
| TCCAAATACCAAGTTTGAAA+GGG | - | chr1.1:15725242-15725261 | None:intergenic | 30.0% | |
| TCTGATTTCTTGTAAGAACA+AGG | - | chr1.1:15725219-15725238 | None:intergenic | 30.0% | |
| TGTGCAGCTTAATTTATGTA+CGG | - | chr1.1:15726996-15727015 | None:intergenic | 30.0% | |
| TGTTTGAAAGGGATAATGTT+TGG | + | chr1.1:15726398-15726417 | MS.gene33613:intron | 30.0% | |
| TTCCAAATACCAAGTTTGAA+AGG | - | chr1.1:15725243-15725262 | None:intergenic | 30.0% | |
| TTTGAAAGGGATAATGTTTG+GGG | + | chr1.1:15726400-15726419 | MS.gene33613:intron | 30.0% | |
| ! | CAAACGGATAATAGTCATTT+TGG | - | chr1.1:15725800-15725819 | None:intergenic | 30.0% |
| AAATCAGACCCTTTCAAACT+TGG | + | chr1.1:15725231-15725250 | MS.gene33613:CDS | 35.0% | |
| AACCTCTTGTGTGAAAACAA+GGG | - | chr1.1:15727098-15727117 | None:intergenic | 35.0% | |
| ACCCTTTCAAACTTGGTATT+TGG | + | chr1.1:15725238-15725257 | MS.gene33613:CDS | 35.0% | |
| AGAAGAAGAAGAAGCAGTAT+TGG | - | chr1.1:15725458-15725477 | None:intergenic | 35.0% | |
| AGACTATCTTTCAACGATGT+AGG | - | chr1.1:15725860-15725879 | None:intergenic | 35.0% | |
| AGAGATAACATACTAACCAG+GGG | - | chr1.1:15725503-15725522 | None:intergenic | 35.0% | |
| AGGGGAAATGTAAAATTTGC+GGG | - | chr1.1:15725485-15725504 | None:intergenic | 35.0% | |
| AGTAAGGACTAAAGAACCAA+TGG | - | chr1.1:15726516-15726535 | None:intergenic | 35.0% | |
| ATCTTTCACCTTACAAAAGC+CGG | + | chr1.1:15725905-15725924 | MS.gene33613:intron | 35.0% | |
| ATTTGTCGATAGAGAGAAAC+AGG | + | chr1.1:15725350-15725369 | MS.gene33613:CDS | 35.0% | |
| CAAAAAAATGCTTCTGGATC+TGG | + | chr1.1:15726819-15726838 | MS.gene33613:intron | 35.0% | |
| CAATAAAACCCGAAGATTTC+TGG | + | chr1.1:15728321-15728340 | MS.gene33613:CDS | 35.0% | |
| CAATGGAAAATCGACAACTT+TGG | + | chr1.1:15725192-15725211 | MS.gene33613:CDS | 35.0% | |
| CAGGGGAAATGTAAAATTTG+CGG | - | chr1.1:15725486-15725505 | None:intergenic | 35.0% | |
| CAGTAAACTATCATTAGTGG+AGG | - | chr1.1:15726177-15726196 | None:intergenic | 35.0% | |
| CATTGGGGTAATAGTCAATT+TGG | + | chr1.1:15725607-15725626 | MS.gene33613:intron | 35.0% | |
| CCTACTTGAAGATCTTAACT+CGG | + | chr1.1:15728418-15728437 | MS.gene33613:CDS | 35.0% | |
| CTACTTGAAGATCTTAACTC+GGG | + | chr1.1:15728419-15728438 | MS.gene33613:CDS | 35.0% | |
| GCAGCTAATAAATACGACAT+CGG | + | chr1.1:15728368-15728387 | MS.gene33613:CDS | 35.0% | |
| GTAAGGACTAAAGAACCAAT+GGG | - | chr1.1:15726515-15726534 | None:intergenic | 35.0% | |
| GTGCAGCTTAATTTATGTAC+GGG | - | chr1.1:15726995-15727014 | None:intergenic | 35.0% | |
| TAAGGACTAAAGAACCAATG+GGG | - | chr1.1:15726514-15726533 | None:intergenic | 35.0% | |
| TAATGCGACAGTTCATGAAA+GGG | + | chr1.1:15727639-15727658 | MS.gene33613:intron | 35.0% | |
| TAGTCCTTACTACGATACTA+AGG | + | chr1.1:15726525-15726544 | MS.gene33613:intron | 35.0% | |
| TCATACCTCTTAAACTGTTG+CGG | + | chr1.1:15726633-15726652 | MS.gene33613:intron | 35.0% | |
| TCCATACATGTATCTCAGAA+GGG | - | chr1.1:15728300-15728319 | None:intergenic | 35.0% | |
| TGCAGCTTAATTTATGTACG+GGG | - | chr1.1:15727187-15727206 | None:intergenic | 35.0% | |
| TTACTCTTTACTCACTTCAG+AGG | - | chr1.1:15726435-15726454 | None:intergenic | 35.0% | |
| TTCACCATACAATCTTGAAG+TGG | - | chr1.1:15727587-15727606 | None:intergenic | 35.0% | |
| TTCCATACATGTATCTCAGA+AGG | - | chr1.1:15728301-15728320 | None:intergenic | 35.0% | |
| TTCCTTACCAACTGAGTATA+TGG | + | chr1.1:15726148-15726167 | MS.gene33613:intron | 35.0% | |
| TTGAAAGGGATAATGTTTGG+GGG | + | chr1.1:15726401-15726420 | MS.gene33613:intron | 35.0% | |
| ! | ACAATCTAAATGATGACGTC+TGG | + | chr1.1:15726732-15726751 | MS.gene33613:intron | 35.0% |
| ! | ATCCATATACTCAGTTGGTA+AGG | - | chr1.1:15726153-15726172 | None:intergenic | 35.0% |
| ! | CGATTTTCCATTGAGCTAAT+CGG | - | chr1.1:15725185-15725204 | None:intergenic | 35.0% |
| ! | GATTTTCCATTGAGCTAATC+GGG | - | chr1.1:15725184-15725203 | None:intergenic | 35.0% |
| ! | TCAAACTTGGTATTTGGAAC+TGG | + | chr1.1:15725244-15725263 | MS.gene33613:CDS | 35.0% |
| ! | TGATGACGTCTGGTAAATTA+CGG | + | chr1.1:15726742-15726761 | MS.gene33613:intron | 35.0% |
| !! | ACTTTGAGATTATTAGCTCG+TGG | - | chr1.1:15727277-15727296 | None:intergenic | 35.0% |
| !! | ATACTCAGTTGGTAAGGAAT+TGG | - | chr1.1:15726147-15726166 | None:intergenic | 35.0% |
| !! | CACTTTGAAGTCTAAACAAG+CGG | - | chr1.1:15727375-15727394 | None:intergenic | 35.0% |
| !! | CGGTTTTGTAAAGATGAGTT+AGG | + | chr1.1:15725925-15725944 | MS.gene33613:intron | 35.0% |
| !! | TCAAAAAAGTGTCTGACACA+GGG | - | chr1.1:15725694-15725713 | None:intergenic | 35.0% |
| !! | TCCAGAAGAGACTGATTTTT+GGG | + | chr1.1:15726566-15726585 | MS.gene33613:intron | 35.0% |
| !! | TTACAAAACCGGCTTTTGTA+AGG | - | chr1.1:15725916-15725935 | None:intergenic | 35.0% |
| !! | TTCAAGAAGTGCTTACGATT+TGG | + | chr1.1:15728603-15728622 | MS.gene33613:CDS | 35.0% |
| !!! | ACCGCAGAAACTTCTTTTTT+TGG | - | chr1.1:15727338-15727357 | None:intergenic | 35.0% |
| !!! | TTTTTTCCAACTGAGAGTCA+GGG | + | chr1.1:15728011-15728030 | MS.gene33613:intron | 35.0% |
| !!! | TTTTTTTCCAACTGAGAGTC+AGG | + | chr1.1:15728010-15728029 | MS.gene33613:intron | 35.0% |
| AACAACTTTACTGTTGCGCA+AGG | + | chr1.1:15727158-15727177 | MS.gene33613:intron | 40.0% | |
| AAGGCTATACACCAAATGGT+GGG | - | chr1.1:15727074-15727093 | None:intergenic | 40.0% | |
| ACCCAAAAATCAGTCTCTTC+TGG | - | chr1.1:15726570-15726589 | None:intergenic | 40.0% | |
| AGAATGAAACGAGCAATAGG+AGG | - | chr1.1:15725427-15725446 | None:intergenic | 40.0% | |
| AGAGACTCACATTTAGAGGA+TGG | - | chr1.1:15727756-15727775 | None:intergenic | 40.0% | |
| ATCGAGAGTTAGAGGAAATG+AGG | - | chr1.1:15726375-15726394 | None:intergenic | 40.0% | |
| ATCTATCTAGTGACCTGTCT+TGG | + | chr1.1:15727420-15727439 | MS.gene33613:intron | 40.0% | |
| ATTCATATTCCACAAGAGCG+TGG | - | chr1.1:15726124-15726143 | None:intergenic | 40.0% | |
| CAACACTCAAGTTTCGTATC+AGG | + | chr1.1:15726951-15726970 | MS.gene33613:intron | 40.0% | |
| CAACCTCTTGTGTGAAAACA+AGG | - | chr1.1:15727099-15727118 | None:intergenic | 40.0% | |
| CAAGGGATACAATACTAAGC+AGG | - | chr1.1:15726889-15726908 | None:intergenic | 40.0% | |
| CATCAATAATCAAGCGACCA+AGG | - | chr1.1:15727711-15727730 | None:intergenic | 40.0% | |
| CATTTAGAGGATGGATCTTG+AGG | - | chr1.1:15727747-15727766 | None:intergenic | 40.0% | |
| CCGAGTTAAGATCTTCAAGT+AGG | - | chr1.1:15728421-15728440 | None:intergenic | 40.0% | |
| CGAAGAATGAAACGAGCAAT+AGG | - | chr1.1:15725430-15725449 | None:intergenic | 40.0% | |
| CTTGTGACATGTCTTCTATG+TGG | - | chr1.1:15728265-15728284 | None:intergenic | 40.0% | |
| CTTGTGTGAAAACAAGGGTA+AGG | - | chr1.1:15727093-15727112 | None:intergenic | 40.0% | |
| GAGGAATCCATATACTCAGT+TGG | - | chr1.1:15726158-15726177 | None:intergenic | 40.0% | |
| GATACATTGAGGGACTATTG+TGG | + | chr1.1:15725752-15725771 | MS.gene33613:intron | 40.0% | |
| GATGACGTCTGGTAAATTAC+GGG | + | chr1.1:15726743-15726762 | MS.gene33613:intron | 40.0% | |
| GGAAATGTAAAATTTGCGGG+AGG | - | chr1.1:15725482-15725501 | None:intergenic | 40.0% | |
| GTAATGCGACAGTTCATGAA+AGG | + | chr1.1:15727638-15727657 | MS.gene33613:intron | 40.0% | |
| GTATGGTGAAATGCTGATAG+AGG | + | chr1.1:15727597-15727616 | MS.gene33613:intron | 40.0% | |
| GTTTCTGCGGTAAACTCATA+TGG | + | chr1.1:15727347-15727366 | MS.gene33613:intron | 40.0% | |
| TAAGGCTATACACCAAATGG+TGG | - | chr1.1:15727075-15727094 | None:intergenic | 40.0% | |
| TCATGAACTGTCGCATTACA+GGG | - | chr1.1:15727637-15727656 | None:intergenic | 40.0% | |
| TCTTTCAACGATGTAGGACT+TGG | - | chr1.1:15725854-15725873 | None:intergenic | 40.0% | |
| TGAAAGGGATAATGTTTGGG+GGG | + | chr1.1:15726402-15726421 | MS.gene33613:intron | 40.0% | |
| TGGTACGTGAATGTGTAACA+AGG | + | chr1.1:15725627-15725646 | MS.gene33613:intron | 40.0% | |
| TGTACCATCTGCGGTTATAA+TGG | - | chr1.1:15728150-15728169 | None:intergenic | 40.0% | |
| TGTTCTCGATAGGCTTAATG+AGG | + | chr1.1:15728445-15728464 | MS.gene33613:CDS | 40.0% | |
| TTCATGAACTGTCGCATTAC+AGG | - | chr1.1:15727638-15727657 | None:intergenic | 40.0% | |
| TTTCGTATCAGGAAACATGC+AGG | + | chr1.1:15726962-15726981 | MS.gene33613:intron | 40.0% | |
| ! | CAATTTCCCGATTAGCTCAA+TGG | + | chr1.1:15725175-15725194 | MS.gene33613:CDS | 40.0% |
| ! | CGCAAATTTTACATTTCCCC+TGG | + | chr1.1:15725484-15725503 | MS.gene33613:CDS | 40.0% |
| ! | GAATGCAGTTTTCCATCAGA+TGG | - | chr1.1:15728059-15728078 | None:intergenic | 40.0% |
| ! | TGGCTACTTGTTACACATTG+AGG | + | chr1.1:15725772-15725791 | MS.gene33613:intron | 40.0% |
| ! | TTCATATTCCACAAGAGCGT+GGG | - | chr1.1:15726123-15726142 | None:intergenic | 40.0% |
| ! | TTTTCCATCAGATGGCCATA+TGG | - | chr1.1:15728051-15728070 | None:intergenic | 40.0% |
| !! | AGAAGAGACTGATTTTTGGG+TGG | + | chr1.1:15726569-15726588 | MS.gene33613:intron | 40.0% |
| !! | AGTGCCACTTCAAGATTGTA+TGG | + | chr1.1:15727580-15727599 | MS.gene33613:intron | 40.0% |
| !! | GGGAAAAGAGAGGTATTGAA+TGG | + | chr1.1:15726657-15726676 | MS.gene33613:intron | 40.0% |
| !! | GTCAAAAAAGTGTCTGACAC+AGG | - | chr1.1:15725695-15725714 | None:intergenic | 40.0% |
| !! | GTCCAGAAGAGACTGATTTT+TGG | + | chr1.1:15726565-15726584 | MS.gene33613:intron | 40.0% |
| !!! | AAGAGACTGATTTTTGGGTG+GGG | + | chr1.1:15726571-15726590 | MS.gene33613:intron | 40.0% |
| !!! | GAAGAGACTGATTTTTGGGT+GGG | + | chr1.1:15726570-15726589 | MS.gene33613:intron | 40.0% |
| !!! | TACCCTTGTTTTCACACAAG+AGG | + | chr1.1:15727093-15727112 | MS.gene33613:intron | 40.0% |
| !!! | TGTTTTTTCGTCATGCAGAC+CGG | + | chr1.1:15728561-15728580 | MS.gene33613:CDS | 40.0% |
| AAACACGGATCGAGAGTTAG+AGG | - | chr1.1:15726383-15726402 | None:intergenic | 45.0% | |
| AACCGCAGATGGTACACTTA+AGG | + | chr1.1:15728154-15728173 | MS.gene33613:CDS | 45.0% | |
| ACCTCTTAAACTGTTGCGGA+GGG | + | chr1.1:15726637-15726656 | MS.gene33613:intron | 45.0% | |
| ACTCGGGAAATGTTCTCGAT+AGG | + | chr1.1:15728435-15728454 | MS.gene33613:CDS | 45.0% | |
| ACTCTCGATCCGTGTTTGAA+AGG | + | chr1.1:15726386-15726405 | MS.gene33613:intron | 45.0% | |
| AGCCTTAAGTGTACCATCTG+CGG | - | chr1.1:15728159-15728178 | None:intergenic | 45.0% | |
| AGGATTCGTCAGATGATGCA+GGG | - | chr1.1:15726869-15726888 | None:intergenic | 45.0% | |
| AGTTCCATATGGCCATCTGA+TGG | + | chr1.1:15728044-15728063 | MS.gene33613:CDS | 45.0% | |
| ATCAGATGGCCATATGGAAC+TGG | - | chr1.1:15728045-15728064 | None:intergenic | 45.0% | |
| CAACAAAGAGATTCACACGC+GGG | + | chr1.1:15726083-15726102 | MS.gene33613:intron | 45.0% | |
| CATCTGCGGTTATAATGGTG+AGG | - | chr1.1:15728145-15728164 | None:intergenic | 45.0% | |
| CATGTCACAAGAATCCTGCA+CGG | + | chr1.1:15728274-15728293 | MS.gene33613:CDS | 45.0% | |
| CCAACAAAGAGATTCACACG+CGG | + | chr1.1:15726082-15726101 | MS.gene33613:intron | 45.0% | |
| CCAAGGAATGTAGTATCCAC+AGG | - | chr1.1:15727694-15727713 | None:intergenic | 45.0% | |
| CCTGTGCTTCCAGAAATCTT+CGG | - | chr1.1:15728333-15728352 | None:intergenic | 45.0% | |
| CCTGTGGATACTACATTCCT+TGG | + | chr1.1:15727691-15727710 | MS.gene33613:CDS | 45.0% | |
| CGCGTGTGAATCTCTTTGTT+GGG | - | chr1.1:15726084-15726103 | None:intergenic | 45.0% | |
| CTCACCATTATAACCGCAGA+TGG | + | chr1.1:15728143-15728162 | MS.gene33613:CDS | 45.0% | |
| CTCTCGATCCGTGTTTGAAA+GGG | + | chr1.1:15726387-15726406 | MS.gene33613:intron | 45.0% | |
| CTGTGCTTCCAGAAATCTTC+GGG | - | chr1.1:15728332-15728351 | None:intergenic | 45.0% | |
| CTTTCTTCAACTTGTGCAGC+TGG | - | chr1.1:15728481-15728500 | None:intergenic | 45.0% | |
| GAACCTGTGATGACTTTGTC+TGG | + | chr1.1:15727668-15727687 | MS.gene33613:CDS | 45.0% | |
| GGGTAAGGCTATACACCAAA+TGG | - | chr1.1:15727078-15727097 | None:intergenic | 45.0% | |
| GTCACGTGACTGAAAGGTTA+CGG | - | chr1.1:15727138-15727157 | None:intergenic | 45.0% | |
| GTTGTTGTCACGTGACTGAA+AGG | - | chr1.1:15727144-15727163 | None:intergenic | 45.0% | |
| TACCTCTTAAACTGTTGCGG+AGG | + | chr1.1:15726636-15726655 | MS.gene33613:intron | 45.0% | |
| TCACGTGACTGAAAGGTTAC+GGG | - | chr1.1:15727137-15727156 | None:intergenic | 45.0% | |
| TGTTCCTTAGAAACACGCGA+AGG | - | chr1.1:15725403-15725422 | None:intergenic | 45.0% | |
| TTAGAAACACGCGAAGGTTC+AGG | - | chr1.1:15725397-15725416 | None:intergenic | 45.0% | |
| ! | AGTTTAGGTGAGTTGGGTTC+CGG | + | chr1.1:15726028-15726047 | MS.gene33613:intron | 45.0% |
| ! | CAGCTGCACAAGTTGAAGAA+AGG | + | chr1.1:15728479-15728498 | MS.gene33613:CDS | 45.0% |
| ! | TCACACAAGAGGTTGTTTCC+AGG | + | chr1.1:15727104-15727123 | MS.gene33613:intron | 45.0% |
| ! | TGAACCTTCGCGTGTTTCTA+AGG | + | chr1.1:15725396-15725415 | MS.gene33613:CDS | 45.0% |
| !! | GCCCTTCTGAGATACATGTA+TGG | + | chr1.1:15728296-15728315 | MS.gene33613:CDS | 45.0% |
| !!! | GTTTTTTCGTCATGCAGACC+GGG | + | chr1.1:15728562-15728581 | MS.gene33613:CDS | 45.0% |
| AAGGTTACGGGTTCAAGTCC+TGG | - | chr1.1:15727125-15727144 | None:intergenic | 50.0% | |
| ACGACAGTGAATGCAGATGC+AGG | - | chr1.1:15726781-15726800 | None:intergenic | 50.0% | |
| ACTAAAGCTCCCGCATATGC+AGG | + | chr1.1:15727034-15727053 | MS.gene33613:intron | 50.0% | |
| ACTAGTTCAGAGGTTCGCTG+AGG | - | chr1.1:15727964-15727983 | None:intergenic | 50.0% | |
| AGGCCAGACAAAGTCATCAC+AGG | - | chr1.1:15727674-15727693 | None:intergenic | 50.0% | |
| AGTATTGTATCCCTTGCCCC+AGG | + | chr1.1:15726893-15726912 | MS.gene33613:intron | 50.0% | |
| CAGGATTCGTCAGATGATGC+AGG | - | chr1.1:15726870-15726889 | None:intergenic | 50.0% | |
| CCGCGTGTGAATCTCTTTGT+TGG | - | chr1.1:15726085-15726104 | None:intergenic | 50.0% | |
| CTAAAGCTCCCGCATATGCA+GGG | + | chr1.1:15727035-15727054 | MS.gene33613:intron | 50.0% | |
| CTAGTTCAGAGGTTCGCTGA+GGG | - | chr1.1:15727963-15727982 | None:intergenic | 50.0% | |
| CTGAAACACAGGAGAGGTTG+CGG | - | chr1.1:15728198-15728217 | None:intergenic | 50.0% | |
| CTTCGTCAAGCATACGAGAG+AGG | - | chr1.1:15728109-15728128 | None:intergenic | 50.0% | |
| GTGGAGAAGCCAGTTCCATA+TGG | + | chr1.1:15728033-15728052 | MS.gene33613:CDS | 50.0% | |
| TCCCTCCGCAACAGTTTAAG+AGG | - | chr1.1:15726641-15726660 | None:intergenic | 50.0% | |
| TCGATAGGCTTAATGAGGCC+TGG | + | chr1.1:15728450-15728469 | MS.gene33613:CDS | 50.0% | |
| TGATACGAGGCCTGAAACAC+AGG | - | chr1.1:15728209-15728228 | None:intergenic | 50.0% | |
| TGATCTCAAAGACGCATGCG+AGG | + | chr1.1:15728391-15728410 | MS.gene33613:CDS | 50.0% | |
| TGATGACTTTGTCTGGCCTG+TGG | + | chr1.1:15727675-15727694 | MS.gene33613:CDS | 50.0% | |
| TTCGCTGCTGTTGTGATACG+AGG | - | chr1.1:15728222-15728241 | None:intergenic | 50.0% | |
| TTTCCAACTGAGAGTCAGGG+TGG | + | chr1.1:15728014-15728033 | MS.gene33613:intron | 50.0% | |
| ! | AGATTTCTGGAAGCACAGGC+TGG | + | chr1.1:15728334-15728353 | MS.gene33613:CDS | 50.0% |
| ! | CAAGCATACGAGAGAGGCAT+CGG | - | chr1.1:15728103-15728122 | None:intergenic | 50.0% |
| ! | CCGAAGATTTCTGGAAGCAC+AGG | + | chr1.1:15728330-15728349 | MS.gene33613:CDS | 50.0% |
| ! | GTTTAGGTGAGTTGGGTTCC+GGG | + | chr1.1:15726029-15726048 | MS.gene33613:intron | 50.0% |
| ! | TTTAGGTGAGTTGGGTTCCG+GGG | + | chr1.1:15726030-15726049 | MS.gene33613:intron | 50.0% |
| AAGCACAGGCTGGCATTGCT+TGG | + | chr1.1:15728344-15728363 | MS.gene33613:CDS | 55.0% | |
| ACATCTCCAGCATGAGCTCC+CGG | - | chr1.1:15728583-15728602 | None:intergenic | 55.0% | |
| CATATGCAGGGTTCGGGAAG+GGG | + | chr1.1:15727047-15727066 | MS.gene33613:intron | 55.0% | |
| CGCAACCTCTCCTGTGTTTC+AGG | + | chr1.1:15728196-15728215 | MS.gene33613:CDS | 55.0% | |
| CTGTTGCGGAGGGAAAAGAG+AGG | + | chr1.1:15726647-15726666 | MS.gene33613:intron | 55.0% | |
| CTTCCCGAACCCTGCATATG+CGG | - | chr1.1:15727047-15727066 | None:intergenic | 55.0% | |
| CTTGTGCAGCTGGTACAACC+AGG | - | chr1.1:15728471-15728490 | None:intergenic | 55.0% | |
| GAGTTGTACCCACGCTCTTG+TGG | + | chr1.1:15726112-15726131 | MS.gene33613:intron | 55.0% | |
| GCATATGCAGGGTTCGGGAA+GGG | + | chr1.1:15727046-15727065 | MS.gene33613:intron | 55.0% | |
| TCTCCACCCTGACTCTCAGT+TGG | - | chr1.1:15728020-15728039 | None:intergenic | 55.0% | |
| TTCCCGAACCCTGCATATGC+GGG | - | chr1.1:15727046-15727065 | None:intergenic | 55.0% | |
| ! | ATGCGGGAGCTTTAGTGCAC+CGG | - | chr1.1:15727030-15727049 | None:intergenic | 55.0% |
| ! | TTGGGTTCCGGGGTTGACTT+GGG | + | chr1.1:15726040-15726059 | MS.gene33613:intron | 55.0% |
| ATGGCTATCCCCTGCTGCCT+GGG | - | chr1.1:15726913-15726932 | None:intergenic | 60.0% | |
| CCTTGACCCCAAGTCAACCC+CGG | - | chr1.1:15726050-15726069 | None:intergenic | 60.0% | |
| CGAGGCCTGAAACACAGGAG+AGG | - | chr1.1:15728204-15728223 | None:intergenic | 60.0% | |
| CGCATATGCAGGGTTCGGGA+AGG | + | chr1.1:15727045-15727064 | MS.gene33613:intron | 60.0% | |
| CTCCCGCATATGCAGGGTTC+GGG | + | chr1.1:15727041-15727060 | MS.gene33613:intron | 60.0% | |
| GCTCCCGCATATGCAGGGTT+CGG | + | chr1.1:15727040-15727059 | MS.gene33613:intron | 60.0% | |
| GCTGCACATAAAGGGCAGCC+CGG | + | chr1.1:15727008-15727027 | MS.gene33613:intron | 60.0% | |
| GTATCTCAGAAGGGCCGTGC+AGG | - | chr1.1:15728291-15728310 | None:intergenic | 60.0% | |
| GTTGGGTTCCGGGGTTGACT+TGG | + | chr1.1:15726039-15726058 | MS.gene33613:intron | 60.0% | |
| TATGGCTATCCCCTGCTGCC+TGG | - | chr1.1:15726914-15726933 | None:intergenic | 60.0% | |
| ! | TGCGGGAGCTTTAGTGCACC+GGG | - | chr1.1:15727029-15727048 | None:intergenic | 60.0% |
| !! | TGGGTTCCGGGGTTGACTTG+GGG | + | chr1.1:15726041-15726060 | MS.gene33613:intron | 60.0% |
| ATCCCTTGCCCCAGGCAGCA+GGG | + | chr1.1:15726901-15726920 | MS.gene33613:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | + | chr1.1:15727060-15727079 | MS.gene33613:intron | 65.0% | |
| TATCCCTTGCCCCAGGCAGC+AGG | + | chr1.1:15726900-15726919 | MS.gene33613:intron | 65.0% | |
| TGCAGACCGGGAGCTCATGC+TGG | + | chr1.1:15728574-15728593 | MS.gene33613:CDS | 65.0% | |
| TGGCTATCCCCTGCTGCCTG+GGG | - | chr1.1:15726912-15726931 | None:intergenic | 65.0% | |
| !! | CCGGGGTTGACTTGGGGTCA+AGG | + | chr1.1:15726047-15726066 | MS.gene33613:intron | 65.0% |
| ATCCCCTGCTGCCTGGGGCA+AGG | - | chr1.1:15726907-15726926 | None:intergenic | 70.0% | |
| TCCCCTGCTGCCTGGGGCAA+GGG | - | chr1.1:15726906-15726925 | None:intergenic | 70.0% | |
| TCCCTTGCCCCAGGCAGCAG+GGG | + | chr1.1:15726902-15726921 | MS.gene33613:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 15725153 | 15728631 | 15725153 | ID=MS.gene33613 |
| chr1.1 | mRNA | 15725153 | 15728631 | 15725153 | ID=MS.gene33613.t1;Parent=MS.gene33613 |
| chr1.1 | exon | 15725153 | 15725265 | 15725153 | ID=MS.gene33613.t1.exon1;Parent=MS.gene33613.t1 |
| chr1.1 | CDS | 15725153 | 15725265 | 15725153 | ID=cds.MS.gene33613.t1;Parent=MS.gene33613.t1 |
| chr1.1 | exon | 15725348 | 15725505 | 15725348 | ID=MS.gene33613.t1.exon2;Parent=MS.gene33613.t1 |
| chr1.1 | CDS | 15725348 | 15725505 | 15725348 | ID=cds.MS.gene33613.t1;Parent=MS.gene33613.t1 |
| chr1.1 | exon | 15727650 | 15727765 | 15727650 | ID=MS.gene33613.t1.exon3;Parent=MS.gene33613.t1 |
| chr1.1 | CDS | 15727650 | 15727765 | 15727650 | ID=cds.MS.gene33613.t1;Parent=MS.gene33613.t1 |
| chr1.1 | exon | 15728032 | 15728631 | 15728032 | ID=MS.gene33613.t1.exon4;Parent=MS.gene33613.t1 |
| chr1.1 | CDS | 15728032 | 15728631 | 15728032 | ID=cds.MS.gene33613.t1;Parent=MS.gene33613.t1 |
| Gene Sequence |
| Protein sequence |
