AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene33668

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33668.t1 MTR_4g013260 93.523 386 14 3 1 378 111 493 0.0 722
MS.gene33668.t1 MTR_7g071120 56.776 428 120 14 4 378 80 495 7.15e-143 415
MS.gene33668.t1 MTR_3g031220 46.803 391 170 11 5 374 134 507 9.63e-96 295
MS.gene33668.t1 MTR_5g074400 61.847 249 66 7 68 289 243 489 2.11e-94 293
MS.gene33668.t1 MTR_5g094430 51.331 263 108 5 49 295 47 305 1.20e-78 248
MS.gene33668.t1 MTR_5g094430 51.331 263 108 5 49 295 69 327 1.29e-78 248
MS.gene33668.t1 MTR_5g094430 51.331 263 108 5 49 295 181 439 1.06e-77 249
MS.gene33668.t1 MTR_3g056100 54.425 226 94 3 65 282 96 320 2.06e-76 243
MS.gene33668.t1 MTR_3g056100 54.425 226 94 3 65 282 240 464 6.65e-76 245
MS.gene33668.t1 MTR_5g042920 53.226 248 97 5 65 294 148 394 7.50e-76 241
MS.gene33668.t1 MTR_3g056100 53.498 243 83 6 65 282 96 333 5.67e-75 239
MS.gene33668.t1 MTR_3g056100 53.498 243 83 6 65 282 240 477 2.06e-74 242
MS.gene33668.t1 MTR_7g011820 47.842 278 102 8 65 311 225 490 8.70e-72 233
MS.gene33668.t1 MTR_4g082580 48.333 240 105 4 65 304 142 362 4.10e-71 228
MS.gene33668.t1 MTR_3g031220 50.391 256 103 8 5 240 134 385 1.38e-67 218
MS.gene33668.t1 MTR_3g031220 49.333 75 33 2 211 281 185 258 2.36e-15 77.0
MS.gene33668.t1 MTR_7g080000 47.970 271 81 8 65 282 231 494 6.56e-66 222
MS.gene33668.t1 MTR_7g080020 43.910 312 105 8 58 304 270 576 6.30e-65 220
MS.gene33668.t1 MTR_7g080020 40.566 106 55 2 68 169 493 594 2.28e-16 81.3
MS.gene33668.t1 MTR_7g100510 50.000 236 90 5 69 280 190 421 5.17e-64 211
MS.gene33668.t1 MTR_5g097490 41.538 260 126 5 65 312 89 334 9.09e-51 174
MS.gene33668.t1 MTR_3g009470 66.187 139 38 4 158 294 436 567 4.70e-49 176
MS.gene33668.t1 MTR_3g009470 70.769 65 18 1 68 132 280 343 4.51e-24 104
MS.gene33668.t1 MTR_3g009470 44.444 108 47 3 56 154 474 577 1.47e-17 84.7
MS.gene33668.t1 MTR_3g009470 56.667 60 25 1 220 279 280 338 1.23e-13 72.8
MS.gene33668.t1 MTR_5g097500 34.914 232 144 3 60 291 77 301 1.37e-39 143
MS.gene33668.t1 MTR_4g130900 32.166 314 179 7 50 335 168 475 3.00e-38 143
MS.gene33668.t1 MTR_1g077780 65.823 79 27 0 201 279 43 121 3.81e-32 118
MS.gene33668.t1 MTR_1g077780 50.649 77 35 1 68 144 62 135 6.98e-16 74.7
MS.gene33668.t1 MTR_8g007270 61.842 76 29 0 201 276 135 210 2.43e-28 110
MS.gene33668.t1 MTR_8g007270 46.479 71 38 0 54 124 140 210 8.06e-15 73.6
MS.gene33668.t1 MTR_4g094588 64.865 74 26 0 206 279 164 237 6.88e-28 112
MS.gene33668.t1 MTR_4g094588 46.667 90 46 1 54 143 164 251 1.23e-19 89.4
MS.gene33668.t1 MTR_1g015140 61.842 76 28 1 201 276 84 158 3.49e-27 105
MS.gene33668.t1 MTR_1g015140 53.448 58 27 0 68 125 102 159 1.90e-15 73.9
MS.gene33668.t1 MTR_8g092010 37.267 161 94 2 127 280 8 168 1.12e-26 105
MS.gene33668.t1 MTR_8g092010 37.255 102 61 1 26 127 69 167 6.34e-16 75.9
MS.gene33668.t1 MTR_3g095080 59.459 74 30 0 203 276 151 224 2.56e-26 105
MS.gene33668.t1 MTR_3g095080 50.877 57 28 0 68 124 168 224 1.77e-14 72.8
MS.gene33668.t1 MTR_3g095080 59.459 74 30 0 203 276 127 200 2.70e-26 105
MS.gene33668.t1 MTR_3g095080 50.877 57 28 0 68 124 144 200 2.09e-14 72.0
MS.gene33668.t1 MTR_7g109800 47.414 116 51 2 204 319 129 234 4.52e-26 106
MS.gene33668.t1 MTR_7g109800 39.062 128 77 1 27 153 104 231 4.18e-21 92.8
MS.gene33668.t1 MTR_2g033820 60.526 76 30 0 204 279 187 262 6.80e-26 107
MS.gene33668.t1 MTR_2g033820 47.253 91 46 1 54 144 189 277 2.46e-21 94.7
MS.gene33668.t1 MTR_8g096730 55.422 83 37 0 196 278 46 128 7.15e-26 102
MS.gene33668.t1 MTR_8g096730 50.769 65 32 0 61 125 63 127 1.15e-15 73.9
MS.gene33668.t1 MTR_5g091390 62.162 74 28 0 206 279 143 216 8.16e-26 106
MS.gene33668.t1 MTR_5g091390 46.914 81 43 0 54 134 143 223 2.43e-17 82.4
MS.gene33668.t1 MTR_3g104750 55.263 76 34 0 201 276 85 160 3.04e-25 100
MS.gene33668.t1 MTR_3g104750 53.448 58 27 0 68 125 104 161 1.58e-16 77.0
MS.gene33668.t1 MTR_1g086790 57.895 76 32 0 204 279 142 217 3.97e-25 104
MS.gene33668.t1 MTR_1g086790 51.316 76 37 0 68 143 158 233 1.05e-19 89.4
MS.gene33668.t1 MTR_8g092140 58.667 75 30 1 203 276 142 216 5.64e-25 102
MS.gene33668.t1 MTR_8g092140 50.877 57 28 0 68 124 160 216 1.52e-14 72.8
MS.gene33668.t1 MTR_5g043880 56.962 79 34 0 198 276 102 180 9.01e-25 102
MS.gene33668.t1 MTR_5g043880 61.404 57 22 0 68 124 124 180 1.36e-16 79.7
MS.gene33668.t1 MTR_7g079010 60.526 76 30 0 201 276 122 197 9.36e-25 100
MS.gene33668.t1 MTR_7g079010 48.000 75 39 0 51 125 124 198 3.17e-17 80.1
MS.gene33668.t1 MTR_7g028415 63.235 68 25 0 211 278 84 151 1.06e-24 99.8
MS.gene33668.t1 MTR_7g028415 43.373 83 44 1 57 139 82 161 8.32e-16 75.1
MS.gene33668.t1 MTR_7g028710 63.235 68 25 0 211 278 84 151 1.06e-24 99.8
MS.gene33668.t1 MTR_7g028710 43.373 83 44 1 57 139 82 161 8.32e-16 75.1
MS.gene33668.t1 MTR_3g009470 70.769 65 18 1 68 132 280 343 3.83e-24 103
MS.gene33668.t1 MTR_3g009470 61.176 85 26 3 158 240 436 515 7.02e-21 94.4
MS.gene33668.t1 MTR_3g009470 56.667 60 25 1 220 279 280 338 1.11e-13 72.8
MS.gene33668.t1 MTR_4g132430 51.899 79 37 1 202 279 109 187 4.32e-23 99.4
MS.gene33668.t1 MTR_4g132430 37.647 85 50 2 46 127 103 187 6.01e-14 72.8
MS.gene33668.t1 MTR_3g095040 55.405 74 33 0 206 279 104 177 5.70e-23 95.9
MS.gene33668.t1 MTR_3g095040 45.946 74 40 0 54 127 104 177 6.58e-16 76.3
MS.gene33668.t1 MTR_7g110720 35.570 149 95 1 197 344 166 314 6.97e-23 99.4
MS.gene33668.t1 MTR_7g110720 38.384 99 56 3 43 136 160 258 7.35e-15 75.9
MS.gene33668.t1 MTR_4g094412 51.899 79 37 1 204 281 227 305 9.64e-23 99.8
MS.gene33668.t1 MTR_4g094412 51.899 79 37 1 204 281 218 296 1.01e-22 99.8
MS.gene33668.t1 MTR_7g110720 35.570 149 95 1 197 344 193 341 1.05e-22 99.4
MS.gene33668.t1 MTR_7g110720 38.384 99 56 3 43 136 187 285 8.71e-15 75.9
MS.gene33668.t1 MTR_2g023930 51.899 79 37 1 202 279 287 365 1.14e-22 100
MS.gene33668.t1 MTR_2g023930 40.000 85 48 2 46 127 281 365 3.89e-15 77.0
MS.gene33668.t1 MTR_3g053330 51.282 78 37 1 203 279 234 311 1.16e-22 99.4
MS.gene33668.t1 MTR_3g053330 37.079 89 53 2 51 136 232 320 3.34e-13 71.2
MS.gene33668.t1 MTR_4g132430 51.899 79 37 1 202 279 243 321 2.01e-22 99.0
MS.gene33668.t1 MTR_4g132430 37.647 85 50 2 46 127 237 321 8.75e-14 72.8
MS.gene33668.t1 MTR_4g107970 51.899 79 37 1 203 280 161 239 2.63e-22 99.0
MS.gene33668.t1 MTR_4g107970 48.333 60 30 1 69 127 179 238 7.15e-13 70.1
MS.gene33668.t1 MTR_4g107970 51.899 79 37 1 203 280 238 316 3.78e-22 98.6
MS.gene33668.t1 MTR_4g107970 48.333 60 30 1 69 127 256 315 9.06e-13 70.1
MS.gene33668.t1 MTR_2g088000 51.899 79 37 1 202 279 331 409 4.64e-22 98.2
MS.gene33668.t1 MTR_2g088000 35.955 89 54 2 42 127 321 409 5.47e-12 67.8
MS.gene33668.t1 MTR_4g122530 53.247 77 36 0 204 280 192 268 7.30e-22 96.7
MS.gene33668.t1 MTR_4g122530 50.000 76 37 1 68 143 208 282 1.52e-15 78.2
MS.gene33668.t1 MTR_5g074200 47.059 102 51 3 63 162 215 315 9.95e-22 95.1
MS.gene33668.t1 MTR_5g074200 53.333 60 27 1 220 279 220 278 8.39e-13 68.9
MS.gene33668.t1 MTR_1g009613 53.165 79 33 2 201 278 246 321 8.11e-21 92.8
MS.gene33668.t1 MTR_1g009613 50.877 57 27 1 69 124 263 319 1.06e-11 65.9
MS.gene33668.t1 MTR_4g094908 50.633 79 35 2 201 278 250 325 9.79e-21 92.4
MS.gene33668.t1 MTR_4g094908 52.632 57 26 1 69 124 267 323 4.16e-14 73.2
MS.gene33668.t1 MTR_1g078260 46.667 105 54 2 174 276 200 304 1.25e-20 93.6
MS.gene33668.t1 MTR_1g078260 50.000 58 28 1 68 124 247 304 1.25e-11 66.2
MS.gene33668.t1 MTR_2g105060 41.525 118 53 4 197 309 69 175 1.71e-20 89.7
MS.gene33668.t1 MTR_2g105060 50.820 61 29 1 68 127 94 154 2.40e-16 78.2
MS.gene33668.t1 MTR_2g105060 41.525 118 53 4 197 309 144 250 2.21e-20 90.9
MS.gene33668.t1 MTR_2g105060 42.857 91 47 2 68 153 169 259 3.09e-16 79.0
MS.gene33668.t1 MTR_2g045360 45.361 97 45 3 199 290 193 286 3.01e-20 92.0
MS.gene33668.t1 MTR_2g045360 42.647 68 38 1 69 135 212 279 1.22e-11 66.2
MS.gene33668.t1 MTR_4g049790 49.367 79 39 1 202 279 294 372 4.92e-20 92.0
MS.gene33668.t1 MTR_4g049790 42.667 75 38 2 65 134 305 379 8.04e-12 67.0
MS.gene33668.t1 MTR_5g016610 53.333 75 34 1 207 280 186 260 5.18e-20 89.4
MS.gene33668.t1 MTR_5g016610 52.632 57 26 1 69 124 200 256 1.80e-13 70.5
MS.gene33668.t1 MTR_7g009730 50.649 77 37 1 203 278 202 278 5.31e-20 92.0
MS.gene33668.t1 MTR_7g009730 51.724 58 27 1 69 125 220 277 8.12e-14 73.2
MS.gene33668.t1 MTR_6g086555 52.632 76 35 1 206 280 192 267 6.69e-20 90.9
MS.gene33668.t1 MTR_6g086555 40.741 81 47 1 53 132 191 271 1.94e-14 74.7
MS.gene33668.t1 MTR_4g049760 40.708 113 53 2 207 305 277 389 4.99e-19 89.0
MS.gene33668.t1 MTR_4g049760 34.831 89 57 1 47 134 269 357 6.22e-11 64.3
MS.gene33668.t1 MTR_3g106060 35.570 149 73 4 146 276 52 195 7.11e-19 86.3
MS.gene33668.t1 MTR_3g106060 48.276 58 29 1 68 124 138 195 1.57e-13 70.9
MS.gene33668.t1 MTR_4g127040 49.351 77 35 2 201 276 229 302 6.64e-18 84.0
MS.gene33668.t1 MTR_4g127040 47.368 57 29 1 69 124 246 302 9.08e-11 62.8
MS.gene33668.t1 MTR_1g070455 49.351 77 35 2 201 276 277 350 1.08e-17 84.0
MS.gene33668.t1 MTR_1g070455 41.667 84 45 2 44 126 272 352 1.87e-13 71.2
MS.gene33668.t1 MTR_4g007060 41.748 103 45 3 218 311 126 222 1.19e-17 82.8
MS.gene33668.t1 MTR_4g007060 35.766 137 82 3 68 198 128 264 4.30e-16 78.2
MS.gene33668.t1 MTR_7g062220 59.649 57 23 0 220 276 124 180 1.59e-17 82.8
MS.gene33668.t1 MTR_7g062220 61.404 57 22 0 68 124 124 180 1.78e-17 82.8
MS.gene33668.t1 MTR_4g007060 41.748 103 45 3 218 311 160 256 1.78e-17 82.8
MS.gene33668.t1 MTR_4g007060 35.593 118 70 3 68 183 162 275 6.35e-16 78.2
MS.gene33668.t1 MTR_1g013760 41.304 92 48 3 191 276 106 197 1.55e-16 79.7
MS.gene33668.t1 MTR_1g013760 47.368 57 29 1 69 124 141 197 8.19e-13 68.6
MS.gene33668.t1 MTR_1g013790 41.758 91 52 1 208 297 89 179 2.09e-16 78.6
MS.gene33668.t1 MTR_1g013790 44.262 61 33 1 68 127 101 161 1.64e-11 64.3
MS.gene33668.t1 MTR_1g099600 35.577 104 65 2 201 303 167 269 3.80e-15 75.9
MS.gene33668.t1 MTR_1g099600 45.000 60 32 1 69 127 186 245 1.07e-11 65.5
MS.gene33668.t1 MTR_4g047580 34.746 118 63 2 202 305 263 380 4.29e-15 77.0
MS.gene33668.t1 MTR_7g109600 50.000 62 30 1 221 281 54 115 4.49e-15 75.1
MS.gene33668.t1 MTR_7g109600 53.333 60 27 1 69 127 54 113 1.22e-13 70.9
MS.gene33668.t1 MTR_3g108960 43.590 78 43 1 201 277 295 372 6.49e-15 75.9
MS.gene33668.t1 MTR_8g087000 45.714 70 37 1 221 289 77 146 6.51e-15 73.9
MS.gene33668.t1 MTR_8g087000 38.824 85 51 1 44 127 52 136 6.24e-11 62.4
MS.gene33668.t1 MTR_8g087000 45.714 70 37 1 221 289 78 147 6.54e-15 74.3
MS.gene33668.t1 MTR_8g087000 38.824 85 51 1 44 127 53 137 5.18e-11 62.8
MS.gene33668.t1 MTR_2g032030 41.573 89 50 2 213 300 261 348 8.45e-15 75.9
MS.gene33668.t1 MTR_2g032030 34.167 120 74 3 18 134 215 332 2.24e-12 68.6
MS.gene33668.t1 MTR_2g032030 41.573 89 50 2 213 300 261 348 1.31e-14 75.1
MS.gene33668.t1 MTR_2g032030 34.167 120 74 3 18 134 215 332 2.00e-12 68.6
MS.gene33668.t1 MTR_2g083870 47.826 69 35 1 221 288 81 149 2.37e-14 72.8
MS.gene33668.t1 MTR_8g028565 42.391 92 41 3 221 311 156 236 3.66e-14 73.2
MS.gene33668.t1 MTR_8g028565 41.791 67 38 1 62 127 149 215 4.20e-11 63.9
MS.gene33668.t1 MTR_0117s0040 45.455 77 39 2 201 276 57 131 3.76e-14 72.0
MS.gene33668.t1 MTR_0117s0040 33.654 104 65 2 22 124 31 131 4.68e-11 62.8
MS.gene33668.t1 MTR_8g098945 49.231 65 32 1 219 282 128 192 4.82e-14 72.0
MS.gene33668.t1 MTR_8g098945 36.735 98 59 2 69 165 130 225 2.27e-12 67.0
MS.gene33668.t1 MTR_2g016770 43.902 82 38 2 221 301 36 110 7.62e-14 70.5
MS.gene33668.t1 MTR_2g024350 48.485 66 33 1 215 279 3 68 8.43e-14 70.5
MS.gene33668.t1 MTR_2g024350 46.154 65 34 1 68 131 8 72 1.13e-11 64.3
MS.gene33668.t1 MTR_1g077760 67.500 40 13 0 201 240 95 134 9.12e-14 68.2
MS.gene33668.t1 MTR_8g069935 38.017 121 68 4 60 179 324 438 1.15e-13 72.4
MS.gene33668.t1 MTR_8g069935 40.845 71 38 2 220 289 331 398 3.14e-12 68.2
MS.gene33668.t1 MTR_2g016770 43.902 82 38 2 221 301 28 102 1.19e-13 69.7
MS.gene33668.t1 MTR_7g079040 51.667 60 28 1 221 279 155 214 2.86e-13 70.5
MS.gene33668.t1 MTR_2g024380 48.485 66 33 1 215 279 246 311 3.77e-13 70.9
MS.gene33668.t1 MTR_2g024380 46.154 65 34 1 68 131 251 315 3.86e-11 64.7
MS.gene33668.t1 MTR_6g046600 64.151 53 18 1 84 136 18 69 6.92e-13 65.1
MS.gene33668.t1 MTR_8g067635 41.667 84 39 2 218 300 347 421 2.22e-12 68.6
MS.gene33668.t1 MTR_8g067635 46.875 64 33 1 65 127 346 409 3.93e-12 67.8
MS.gene33668.t1 MTR_4g021780 50.000 66 31 2 63 128 18 81 4.74e-12 62.8
MS.gene33668.t1 MTR_8g067650 47.541 61 31 1 68 127 339 399 4.90e-12 67.8
MS.gene33668.t1 MTR_8g067650 41.667 84 39 2 218 300 337 411 5.12e-12 67.4
MS.gene33668.t1 MTR_3g090860 40.789 76 40 2 219 291 132 205 7.62e-12 66.2
MS.gene33668.t1 MTR_3g090860 48.276 58 27 2 68 122 133 190 4.09e-11 63.9
MS.gene33668.t1 MTR_5g067680 44.828 58 29 1 68 122 202 259 1.06e-11 65.9
MS.gene33668.t1 MTR_8g099350 50.000 58 26 1 68 122 132 189 1.86e-11 65.1
MS.gene33668.t1 MTR_8g099350 48.276 58 27 1 220 274 132 189 7.46e-11 63.5
MS.gene33668.t1 MTR_8g092010 29.921 127 82 2 127 246 8 134 2.82e-11 61.2
MS.gene33668.t1 MTR_6g053200 39.437 71 42 1 220 289 330 400 4.64e-11 64.7
MS.gene33668.t1 MTR_3g095080 60.000 40 16 0 203 242 151 190 5.07e-11 62.0
MS.gene33668.t1 MTR_6g038890 52.174 46 22 0 202 247 170 215 5.49e-11 62.4
MS.gene33668.t1 MTR_8g027860 36.782 87 47 2 44 122 107 193 9.32e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene33668.t1 AT2G38470 55.556 315 85 12 61 344 178 468 2.27e-96 297
MS.gene33668.t1 AT5G07100 59.821 224 53 5 60 282 109 296 1.32e-81 252
MS.gene33668.t1 AT5G07100 40.426 94 45 1 206 288 92 185 1.33e-14 74.3
MS.gene33668.t1 AT5G07100 60.731 219 49 5 65 282 21 203 2.90e-81 248
MS.gene33668.t1 AT5G07100 40.217 92 44 1 208 288 1 92 7.18e-14 70.5
MS.gene33668.t1 AT5G07100 60.731 219 49 5 65 282 21 203 2.90e-81 248
MS.gene33668.t1 AT5G07100 40.217 92 44 1 208 288 1 92 7.18e-14 70.5
MS.gene33668.t1 AT5G07100 60.731 219 49 5 65 282 21 203 2.90e-81 248
MS.gene33668.t1 AT5G07100 40.217 92 44 1 208 288 1 92 7.18e-14 70.5
MS.gene33668.t1 AT5G07100 60.731 219 49 5 65 282 21 203 2.90e-81 248
MS.gene33668.t1 AT5G07100 40.217 92 44 1 208 288 1 92 7.18e-14 70.5
MS.gene33668.t1 AT1G13960 54.694 245 79 4 65 279 73 315 1.17e-77 244
MS.gene33668.t1 AT1G13960 55.102 245 78 5 65 279 226 468 4.99e-77 246
MS.gene33668.t1 AT4G26640 53.689 244 93 5 68 292 35 277 1.21e-76 241
MS.gene33668.t1 AT4G26640 54.839 62 27 1 218 279 33 93 2.62e-13 71.2
MS.gene33668.t1 AT4G26640 53.689 244 93 5 68 292 35 277 1.21e-76 241
MS.gene33668.t1 AT4G26640 54.839 62 27 1 218 279 33 93 2.62e-13 71.2
MS.gene33668.t1 AT4G26640 53.689 244 93 5 68 292 35 277 1.21e-76 241
MS.gene33668.t1 AT4G26640 54.839 62 27 1 218 279 33 93 2.62e-13 71.2
MS.gene33668.t1 AT4G26640 53.689 244 93 5 68 292 35 277 1.21e-76 241
MS.gene33668.t1 AT4G26640 54.839 62 27 1 218 279 33 93 2.62e-13 71.2
MS.gene33668.t1 AT2G03340 52.852 263 100 8 65 309 247 503 1.66e-76 245
MS.gene33668.t1 AT4G26640 53.689 244 93 5 68 292 139 381 5.27e-76 243
MS.gene33668.t1 AT4G26640 54.839 62 27 1 218 279 137 197 2.35e-13 71.6
MS.gene33668.t1 AT4G26640 53.689 244 93 5 68 292 171 413 6.31e-76 244
MS.gene33668.t1 AT4G26640 54.839 62 27 1 218 279 169 229 2.06e-13 72.0
MS.gene33668.t1 AT4G26640 53.689 244 93 5 68 292 211 453 1.96e-75 244
MS.gene33668.t1 AT4G26640 54.839 62 27 1 218 279 209 269 2.04e-13 72.0
MS.gene33668.t1 AT2G30250 54.825 228 79 5 69 279 167 387 1.20e-72 232
MS.gene33668.t1 AT2G30250 56.250 64 28 0 69 132 329 392 1.47e-16 80.9
MS.gene33668.t1 AT3G01080 55.349 215 83 5 65 279 202 403 1.13e-66 218
MS.gene33668.t1 AT3G01080 55.349 215 83 5 65 279 164 365 1.84e-66 216
MS.gene33668.t1 AT4G26440 43.464 306 123 7 68 325 178 481 1.30e-63 213
MS.gene33668.t1 AT2G37260 42.751 269 118 3 65 299 82 348 1.58e-55 186
MS.gene33668.t1 AT2G37260 42.751 269 118 3 65 299 80 346 1.63e-55 186
MS.gene33668.t1 AT2G04880 43.373 249 113 6 60 285 105 348 3.58e-55 188
MS.gene33668.t1 AT2G37260 42.751 269 118 3 65 299 162 428 5.60e-55 187
MS.gene33668.t1 AT2G04880 40.502 279 102 8 60 285 105 372 2.18e-52 181
MS.gene33668.t1 AT4G30935 39.535 258 133 6 42 282 142 393 4.56e-47 167
MS.gene33668.t1 AT4G30935 41.667 96 49 1 69 164 332 420 3.18e-16 80.5
MS.gene33668.t1 AT5G56270 75.728 103 22 1 180 282 450 549 9.62e-46 167
MS.gene33668.t1 AT5G56270 70.769 65 18 1 68 132 273 336 3.37e-23 102
MS.gene33668.t1 AT5G56270 56.452 62 27 0 68 129 487 548 8.79e-17 82.4
MS.gene33668.t1 AT5G56270 55.738 61 24 2 220 279 273 331 7.40e-13 70.5
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 4.89e-37 143
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.21e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 4.89e-37 143
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.21e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 5.39e-37 143
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.45e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 5.50e-37 143
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.23e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 5.50e-37 143
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.23e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 5.93e-37 143
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.41e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 6.09e-37 143
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.64e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 398 594 7.25e-37 142
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 400 459 6.09e-11 64.7
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 7.30e-37 142
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.85e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 7.65e-37 142
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 5.85e-11 65.1
MS.gene33668.t1 AT4G12020 44.444 207 74 5 65 240 465 661 1.10e-36 142
MS.gene33668.t1 AT4G12020 49.180 61 30 1 219 279 467 526 6.76e-11 64.7
MS.gene33668.t1 AT2G44745 47.748 111 57 1 166 276 92 201 1.38e-28 111
MS.gene33668.t1 AT2G44745 54.386 57 26 0 68 124 145 201 8.64e-15 73.2
MS.gene33668.t1 AT4G18170 63.158 76 28 0 204 279 156 231 3.53e-28 112
MS.gene33668.t1 AT4G18170 47.126 87 46 0 41 127 145 231 7.79e-19 86.7
MS.gene33668.t1 AT1G29860 64.474 76 27 0 204 279 120 195 1.05e-27 110
MS.gene33668.t1 AT1G29860 52.778 72 34 0 68 139 136 207 4.59e-20 89.7
MS.gene33668.t1 AT1G55600 60.494 81 32 0 199 279 286 366 5.47e-27 112
MS.gene33668.t1 AT1G55600 54.054 74 30 1 60 129 295 368 1.86e-18 87.0
MS.gene33668.t1 AT4G39410 61.842 76 29 0 201 276 204 279 6.39e-27 108
MS.gene33668.t1 AT4G39410 46.154 78 41 1 68 144 223 300 1.44e-16 80.1
MS.gene33668.t1 AT5G46350 59.740 77 31 0 206 282 169 245 1.25e-26 108
MS.gene33668.t1 AT5G46350 50.000 80 38 1 54 133 169 246 4.68e-18 84.7
MS.gene33668.t1 AT5G26170 60.000 70 28 0 207 276 100 169 5.13e-26 103
MS.gene33668.t1 AT5G26170 46.377 69 37 0 56 124 101 169 5.35e-16 75.5
MS.gene33668.t1 AT5G49520 59.740 77 31 0 204 280 205 281 1.40e-25 107
MS.gene33668.t1 AT5G49520 56.250 64 28 0 68 131 221 284 4.62e-18 85.5
MS.gene33668.t1 AT2G47260 50.000 106 49 2 204 305 158 263 1.80e-25 105
MS.gene33668.t1 AT2G47260 53.125 64 30 0 68 131 174 237 3.38e-16 79.3
MS.gene33668.t1 AT5G13080 49.000 100 43 1 187 278 26 125 2.32e-25 100
MS.gene33668.t1 AT5G13080 43.373 83 44 1 57 139 56 135 8.36e-16 74.3
MS.gene33668.t1 AT3G01970 62.500 72 27 0 207 278 52 123 2.86e-25 100
MS.gene33668.t1 AT3G01970 47.059 68 36 0 57 124 54 121 1.16e-14 71.2
MS.gene33668.t1 AT5G41570 57.895 76 32 0 201 276 79 154 2.91e-25 101
MS.gene33668.t1 AT5G41570 46.575 73 39 0 53 125 83 155 6.02e-17 78.6
MS.gene33668.t1 AT1G64000 55.696 79 35 0 198 276 92 170 4.34e-25 101
MS.gene33668.t1 AT1G64000 53.448 58 27 0 68 125 114 171 3.06e-16 77.0
MS.gene33668.t1 AT1G69310 59.459 74 30 0 203 276 130 203 5.26e-25 103
MS.gene33668.t1 AT1G69310 49.383 81 41 0 44 124 123 203 5.92e-18 83.6
MS.gene33668.t1 AT1G69310 59.459 74 30 0 203 276 130 203 5.26e-25 103
MS.gene33668.t1 AT1G69310 49.383 81 41 0 44 124 123 203 5.92e-18 83.6
MS.gene33668.t1 AT1G69310 59.459 74 30 0 203 276 130 203 5.26e-25 103
MS.gene33668.t1 AT1G69310 49.383 81 41 0 44 124 123 203 5.92e-18 83.6
MS.gene33668.t1 AT5G64810 59.155 71 29 0 207 277 97 167 2.88e-24 99.0
MS.gene33668.t1 AT5G64810 41.463 82 48 0 43 124 85 166 5.10e-15 73.6
MS.gene33668.t1 AT4G04450 54.430 79 35 1 202 279 180 258 9.63e-24 102
MS.gene33668.t1 AT4G04450 36.170 94 57 2 46 136 174 267 2.16e-14 74.7
MS.gene33668.t1 AT2G46130 56.579 76 33 0 201 276 11 86 2.67e-23 94.0
MS.gene33668.t1 AT2G46130 47.222 72 38 0 54 125 16 87 2.36e-17 77.4
MS.gene33668.t1 AT4G04450 54.430 79 35 1 202 279 274 352 3.71e-23 101
MS.gene33668.t1 AT4G04450 36.170 94 57 2 46 136 268 361 3.28e-14 74.3
MS.gene33668.t1 AT5G15130 53.165 79 36 1 203 280 168 246 4.40e-23 100
MS.gene33668.t1 AT5G15130 48.333 60 30 1 69 127 186 245 2.88e-12 68.2
MS.gene33668.t1 AT5G15130 53.165 79 36 1 203 280 210 288 5.47e-23 100
MS.gene33668.t1 AT5G15130 48.333 60 30 1 69 127 228 287 3.20e-12 68.2
MS.gene33668.t1 AT1G62300 53.165 79 36 1 202 279 294 372 7.85e-23 100
MS.gene33668.t1 AT1G62300 38.202 89 52 2 42 127 284 372 4.19e-14 73.9
MS.gene33668.t1 AT1G68150 51.899 79 37 1 204 281 219 297 8.92e-23 99.0
MS.gene33668.t1 AT1G68150 51.667 60 28 1 69 127 236 295 1.70e-14 74.7
MS.gene33668.t1 AT4G22070 53.165 79 36 1 202 279 279 357 1.12e-22 100
MS.gene33668.t1 AT4G22070 42.667 75 40 2 56 127 283 357 1.13e-12 69.7
MS.gene33668.t1 AT4G22070 53.165 79 36 1 202 279 279 357 1.12e-22 100
MS.gene33668.t1 AT4G22070 42.667 75 40 2 56 127 283 357 1.13e-12 69.7
MS.gene33668.t1 AT4G22070 53.165 79 36 1 202 279 279 357 1.12e-22 100
MS.gene33668.t1 AT4G22070 42.667 75 40 2 56 127 283 357 1.13e-12 69.7
MS.gene33668.t1 AT4G22070 53.165 79 36 1 202 279 279 357 1.12e-22 100
MS.gene33668.t1 AT4G22070 42.667 75 40 2 56 127 283 357 1.13e-12 69.7
MS.gene33668.t1 AT1G18860 53.846 78 35 1 203 279 222 299 2.14e-22 99.0
MS.gene33668.t1 AT1G18860 48.333 60 30 1 69 127 240 299 8.34e-12 67.0
MS.gene33668.t1 AT3G01080 67.188 64 20 1 65 128 202 264 3.80e-22 96.3
MS.gene33668.t1 AT3G01080 53.968 63 28 1 220 282 205 266 2.02e-13 70.9
MS.gene33668.t1 AT3G62340 57.143 77 33 0 204 280 102 178 5.23e-22 95.1
MS.gene33668.t1 AT3G62340 43.820 89 50 0 48 136 98 186 1.63e-18 85.1
MS.gene33668.t1 AT4G31550 50.538 93 41 3 201 291 229 318 3.97e-21 93.2
MS.gene33668.t1 AT4G31550 52.632 57 26 1 69 124 246 302 7.91e-13 69.3
MS.gene33668.t1 AT4G31550 50.538 93 41 3 201 291 230 319 3.98e-21 93.6
MS.gene33668.t1 AT4G31550 52.632 57 26 1 69 124 247 303 8.12e-13 69.3
MS.gene33668.t1 AT2G23320 49.367 79 36 2 201 278 224 299 2.07e-20 91.3
MS.gene33668.t1 AT2G23320 50.877 57 27 1 69 124 241 297 4.30e-13 70.1
MS.gene33668.t1 AT4G01720 50.649 77 37 1 204 279 223 299 2.76e-20 92.8
MS.gene33668.t1 AT4G01720 41.304 92 47 4 43 127 208 299 3.82e-14 73.9
MS.gene33668.t1 AT4G24240 53.333 75 34 1 207 280 268 342 3.00e-20 91.3
MS.gene33668.t1 AT4G24240 50.877 57 27 1 69 124 282 338 1.26e-13 72.0
MS.gene33668.t1 AT1G69310 55.405 74 29 1 203 276 130 199 3.51e-20 90.1
MS.gene33668.t1 AT1G69310 45.679 81 40 1 44 124 123 199 2.63e-13 70.1
MS.gene33668.t1 AT2G24570 54.545 77 31 2 201 276 227 300 1.46e-19 89.0
MS.gene33668.t1 AT2G24570 46.575 73 35 2 53 124 231 300 8.41e-13 68.9
MS.gene33668.t1 AT5G43290 63.158 57 21 0 68 124 114 170 3.20e-19 87.0
MS.gene33668.t1 AT5G43290 55.932 59 26 0 218 276 112 170 1.12e-15 77.0
MS.gene33668.t1 AT1G80840 38.983 118 56 3 218 319 144 261 3.61e-19 87.4
MS.gene33668.t1 AT1G80840 50.820 61 29 1 68 127 146 206 8.28e-16 77.8
MS.gene33668.t1 AT5G28650 50.649 77 34 2 201 276 246 319 5.14e-19 87.4
MS.gene33668.t1 AT5G28650 47.368 57 29 1 69 124 263 319 2.43e-11 64.7
MS.gene33668.t1 AT2G21900 50.000 74 34 1 209 279 95 168 1.16e-18 84.0
MS.gene33668.t1 AT2G21900 39.773 88 45 1 40 127 89 168 6.70e-17 79.0
MS.gene33668.t1 AT3G04670 50.649 77 34 2 201 276 246 319 1.45e-18 86.3
MS.gene33668.t1 AT3G04670 49.123 57 28 1 69 124 263 319 4.97e-12 67.0
MS.gene33668.t1 AT2G46130 52.632 76 32 1 201 276 11 82 1.51e-18 80.9
MS.gene33668.t1 AT2G46130 43.056 72 37 1 54 125 16 83 9.55e-13 64.7
MS.gene33668.t1 AT2G30590 36.667 150 80 4 142 276 221 370 1.91e-18 86.3
MS.gene33668.t1 AT2G30590 41.667 84 45 2 44 126 292 372 2.49e-13 71.2
MS.gene33668.t1 AT4G23550 43.678 87 48 1 209 294 129 215 1.67e-17 82.8
MS.gene33668.t1 AT1G69810 35.659 129 67 3 168 280 79 207 2.80e-17 82.4
MS.gene33668.t1 AT1G69810 35.659 129 67 3 168 280 137 265 4.23e-17 82.4
MS.gene33668.t1 AT2G25000 48.387 62 31 1 219 279 102 163 1.63e-16 78.6
MS.gene33668.t1 AT2G25000 43.284 67 37 1 68 133 103 169 1.14e-13 70.5
MS.gene33668.t1 AT2G25000 48.387 62 31 1 219 279 102 163 1.63e-16 78.6
MS.gene33668.t1 AT2G25000 43.284 67 37 1 68 133 103 169 1.14e-13 70.5
MS.gene33668.t1 AT2G25000 48.387 62 31 1 219 279 124 185 2.77e-16 78.2
MS.gene33668.t1 AT2G25000 43.284 67 37 1 68 133 125 191 1.67e-13 70.1
MS.gene33668.t1 AT4G31800 43.836 73 40 1 208 279 99 171 3.77e-16 77.8
MS.gene33668.t1 AT4G31800 42.254 71 40 1 68 137 111 181 3.96e-14 72.0
MS.gene33668.t1 AT2G25000 48.387 62 31 1 219 279 145 206 4.07e-16 78.2
MS.gene33668.t1 AT2G25000 43.284 67 37 1 68 133 146 212 2.51e-13 70.1
MS.gene33668.t1 AT4G31800 43.836 73 40 1 208 279 164 236 5.46e-16 78.6
MS.gene33668.t1 AT4G31800 42.254 71 40 1 68 137 176 246 6.11e-14 72.4
MS.gene33668.t1 AT1G29280 50.820 61 29 1 221 280 75 135 3.64e-15 75.1
MS.gene33668.t1 AT1G29280 46.970 66 34 1 69 133 75 140 2.27e-13 70.1
MS.gene33668.t1 AT4G01250 52.381 63 29 1 221 282 129 191 5.17e-15 75.5
MS.gene33668.t1 AT4G01250 31.304 115 71 2 69 175 129 243 2.08e-12 67.8
MS.gene33668.t1 AT5G52830 35.294 119 66 3 201 318 147 255 5.48e-15 75.9
MS.gene33668.t1 AT5G52830 48.333 60 30 1 69 127 166 225 1.67e-11 65.5
MS.gene33668.t1 AT1G30650 40.741 81 47 1 203 282 200 280 6.17e-14 73.2
MS.gene33668.t1 AT1G30650 50.000 60 29 1 69 127 218 277 8.95e-12 66.6
MS.gene33668.t1 AT2G34830 40.741 81 47 1 203 282 198 278 6.40e-14 73.2
MS.gene33668.t1 AT2G34830 49.254 67 31 2 69 134 216 280 2.23e-12 68.6
MS.gene33668.t1 AT2G34830 40.741 81 47 1 203 282 207 287 6.83e-14 73.2
MS.gene33668.t1 AT2G34830 49.254 67 31 2 69 134 225 289 2.17e-12 68.6
MS.gene33668.t1 AT3G58710 41.667 84 42 2 211 293 62 139 4.21e-13 69.3
MS.gene33668.t1 AT3G58710 43.421 76 39 2 69 143 72 144 4.33e-11 63.5
MS.gene33668.t1 AT3G58710 41.667 84 42 2 211 293 61 138 4.62e-13 69.3
MS.gene33668.t1 AT3G58710 43.421 76 39 2 69 143 71 143 4.62e-11 63.2
MS.gene33668.t1 AT5G45050 49.206 63 31 1 221 282 1153 1215 3.59e-12 68.6
MS.gene33668.t1 AT5G45050 49.206 63 31 1 221 282 1042 1104 3.62e-12 68.6
MS.gene33668.t1 AT5G45050 49.206 63 31 1 221 282 1181 1243 3.67e-12 68.6
MS.gene33668.t1 AT5G45260 42.683 82 42 2 67 145 1207 1286 5.32e-12 68.2
MS.gene33668.t1 AT5G24110 31.206 141 90 4 207 341 99 238 4.07e-11 63.9

Find 55 sgRNAs with CRISPR-Local

Find 108 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGGCTTCTGATCTTTCTT+TGG 0.174215 4.3:-84296752 MS.gene33668:CDS
TTCTTCTTCATTGAGCAAAT+TGG 0.201399 4.3:+84296913 None:intergenic
GTGCACTTGTAATAACTTCT+TGG 0.242130 4.3:+84296940 None:intergenic
TGGAGGAGATTATGATGATT+TGG 0.259847 4.3:-84296689 MS.gene33668:CDS
GAAGAAAGTTGAAAGGTCTT+TGG 0.287157 4.3:-84296896 MS.gene33668:CDS
GGAGGAGATTATGATGATTT+GGG 0.288731 4.3:-84296688 MS.gene33668:CDS
GTACTGATCTTACCATCTTT+TGG 0.288931 4.3:+84296657 None:intergenic
ATGGCTTCTGATCTTTCTTT+GGG 0.307243 4.3:-84296751 MS.gene33668:CDS
TTATTTGCATACCTTGGGTT+TGG 0.317158 4.3:+84296270 None:intergenic
GGATATAGGTGGAGGAAATA+TGG 0.321679 4.3:-84296315 MS.gene33668:CDS
TTCATCATGCAACAACTCTA+TGG 0.324697 4.3:-84296770 MS.gene33668:CDS
GGATACAGGTGGAGAAAATA+TGG 0.326573 4.3:-84296991 MS.gene33668:CDS
TATGGACAGAAAGTAGTTAA+AGG 0.332389 4.3:-84296297 MS.gene33668:CDS
GTCACTGCTGAAGGCCTTAT+AGG 0.353697 4.3:+84295825 None:intergenic
AATGTGTCCTGTGTCTTTAG+TGG 0.354616 4.3:+84297150 None:intergenic
CTTATAGACATAGAAGCATT+AGG 0.359194 4.3:+84297039 None:intergenic
ATTACTCAAATAGTATATAA+AGG 0.400287 4.3:-84296862 MS.gene33668:CDS
TTCTGATCTTTCTTTGGGAG+AGG 0.403118 4.3:-84296746 MS.gene33668:CDS
AGCCGAGTATTGTTCCGAAT+TGG 0.406866 4.3:+84295665 None:intergenic
ATATTCTTGATGATGGATAT+AGG 0.416334 4.3:-84296329 MS.gene33668:CDS
AATTGGTTCAAATACCAATT+CGG 0.428619 4.3:-84295679 MS.gene33668:CDS
CATGTAATGTTACACCTATA+AGG 0.432770 4.3:-84295839 MS.gene33668:CDS
TTATGATGATTTGGGAATAG+AGG 0.442880 4.3:-84296680 MS.gene33668:CDS
GCAGTAATCACAACATATGA+AGG 0.450008 4.3:-84295942 MS.gene33668:CDS
GAAATTGATATTCTTGATGA+TGG 0.452886 4.3:-84296336 MS.gene33668:CDS
GTTGAAAGGTCTTTGGATGA+TGG 0.456932 4.3:-84296889 MS.gene33668:CDS
AGAAGGGTGTAGAACTGTTA+AGG 0.478856 4.3:-84296388 MS.gene33668:CDS
CAAAGAAAATCAGAAGAAGA+TGG 0.492604 4.3:-84297012 MS.gene33668:CDS
AATCAGAAGAAGATGGATAC+AGG 0.502233 4.3:-84297005 MS.gene33668:CDS
TTGAAAGGTCTTTGGATGAT+GGG 0.504431 4.3:-84296888 MS.gene33668:CDS
GTAGTTTGAACCACAACTCT+AGG 0.508298 4.3:+84296363 None:intergenic
TACCAATTCGGAACAATACT+CGG 0.514905 4.3:-84295667 MS.gene33668:CDS
AGCTATTCTTATTCCACAGA+AGG 0.516161 4.3:-84296405 MS.gene33668:CDS
CTCTTCCTAGAGGTACATCA+TGG 0.532042 4.3:+84295910 None:intergenic
TTCCACAAGCATGTTTCAAG+TGG 0.546004 4.3:-84297828 MS.gene33668:intron
TTGTACACTGAGGCTTAGGA+TGG 0.563371 4.3:+84296830 None:intergenic
GAATAGTTAGTCACTGCTGA+AGG 0.564525 4.3:+84295816 None:intergenic
CATGATGTACCTCTAGGAAG+AGG 0.569832 4.3:-84295909 MS.gene33668:CDS
TATGGAGAGAAACAAGTGAA+AGG 0.574260 4.3:-84296973 MS.gene33668:CDS
TACCACTTGAAACATGCTTG+TGG 0.577939 4.3:+84297826 None:intergenic
TTGATGATGGATATAGGTGG+AGG 0.585484 4.3:-84296323 MS.gene33668:CDS
TGGGAATAGAGGCCAAAAGA+TGG 0.587508 4.3:-84296669 MS.gene33668:intron
AACAGTTCTACACCCTTCTG+TGG 0.594037 4.3:+84296392 None:intergenic
TACTACAAATGTGTAATCCA+AGG 0.596332 4.3:-84296011 MS.gene33668:CDS
CATAACCATGATGTACCTCT+AGG 0.598674 4.3:-84295915 MS.gene33668:CDS
GCTATTCTTATTCCACAGAA+GGG 0.600897 4.3:-84296404 MS.gene33668:CDS
CAGTAATCACAACATATGAA+GGG 0.624707 4.3:-84295941 MS.gene33668:CDS
GGAAGAACCACTAAAGACAC+AGG 0.628554 4.3:-84297157 MS.gene33668:CDS
CAATGAAGAAGAAAGTTGAA+AGG 0.635399 4.3:-84296903 MS.gene33668:CDS
TTAAAGGAAATCCAAACCCA+AGG 0.636841 4.3:-84296281 MS.gene33668:intron
TGTTAAGGAACCTAGAGTTG+TGG 0.637272 4.3:-84296373 MS.gene33668:CDS
CTTGAAATTCCTCTTCCTAG+AGG 0.637467 4.3:+84295900 None:intergenic
CAGAAGAAGATGGATACAGG+TGG 0.640643 4.3:-84297002 MS.gene33668:CDS
GAGTTGTTGCATGATGAAGA+AGG 0.644778 4.3:+84296775 None:intergenic
TTCTTGATGATGGATATAGG+TGG 0.671599 4.3:-84296326 MS.gene33668:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTACTCAAATAGTATATAA+AGG - chr4.3:84296606-84296625 MS.gene33668:intron 15.0%
!! CTAAATGATATAATATACTA+CGG - chr4.3:84297276-84297295 MS.gene33668:intron 15.0%
!! TATCTATAACTATAACTAAA+TGG + chr4.3:84297249-84297268 None:intergenic 15.0%
!! TTTCATTAATGATAATATGT+TGG - chr4.3:84296038-84296057 MS.gene33668:intron 15.0%
!!! TTTGTTTTAAGTAAAAGTTA+TGG + chr4.3:84295686-84295705 None:intergenic 15.0%
!! GAACAAGTTATTATCATATA+GGG + chr4.3:84297415-84297434 None:intergenic 20.0%
!! TATGCAAATAATACAACTTA+CGG - chr4.3:84297210-84297229 MS.gene33668:intron 20.0%
!! TATTCAATAAATGGTATATG+TGG - chr4.3:84296877-84296896 MS.gene33668:CDS 20.0%
!! TCATTAATGAAATGCAATTA+AGG + chr4.3:84296030-84296049 None:intergenic 20.0%
!! TGAACAAGTTATTATCATAT+AGG + chr4.3:84297416-84297435 None:intergenic 20.0%
!! TTTATGATTCTCATTATTGT+AGG - chr4.3:84297019-84297038 MS.gene33668:CDS 20.0%
!!! AAACGACTATTATTTTTAGA+CGG - chr4.3:84297348-84297367 MS.gene33668:intron 20.0%
!!! CAAACAAATTTTTCATTTGA+AGG - chr4.3:84296363-84296382 MS.gene33668:CDS 20.0%
! AAAAGAAGAGCAATAAACAA+AGG + chr4.3:84295810-84295829 None:intergenic 25.0%
! AAGTTATTATCATATAGGGT+TGG + chr4.3:84297411-84297430 None:intergenic 25.0%
! AATAAATCACACATTGTTTG+TGG + chr4.3:84296234-84296253 None:intergenic 25.0%
! GAAATCAACCTCAAAAATAT+TGG + chr4.3:84296988-84297007 None:intergenic 25.0%
! GAAATTGATATTCTTGATGA+TGG - chr4.3:84297132-84297151 MS.gene33668:CDS 25.0%
! TTGTATTATTTGCATACCTT+GGG + chr4.3:84297206-84297225 None:intergenic 25.0%
!! AATTGGTTCAAATACCAATT+CGG - chr4.3:84297789-84297808 MS.gene33668:intron 25.0%
!! AATTTTTCATTTGAAGGACA+AGG - chr4.3:84296369-84296388 MS.gene33668:CDS 25.0%
!! CAAGATAGTTTGAATAGTTT+TGG - chr4.3:84295882-84295901 MS.gene33668:CDS 25.0%
!!! AAACATTTTTAAAGCTGATG+TGG - chr4.3:84295983-84296002 MS.gene33668:CDS 25.0%
!!! ATATTCTTGATGATGGATAT+AGG - chr4.3:84297139-84297158 MS.gene33668:CDS 25.0%
!!! ATGAAGTACCAATATTTTTG+AGG - chr4.3:84296977-84296996 MS.gene33668:CDS 25.0%
AATACTTGTTCAACTTGAAC+AGG - chr4.3:84296290-84296309 MS.gene33668:CDS 30.0%
CAAAGAAAATCAGAAGAAGA+TGG - chr4.3:84296456-84296475 MS.gene33668:intron 30.0%
CAATGAAGAAGAAAGTTGAA+AGG - chr4.3:84296565-84296584 MS.gene33668:intron 30.0%
CAGTAATCACAACATATGAA+GGG - chr4.3:84297527-84297546 MS.gene33668:intron 30.0%
CATGTAATGTTACACCTATA+AGG - chr4.3:84297629-84297648 MS.gene33668:intron 30.0%
GATTCTCATTATTGTAGGAA+AGG - chr4.3:84297024-84297043 MS.gene33668:CDS 30.0%
GTTGTATTATTTGCATACCT+TGG + chr4.3:84297207-84297226 None:intergenic 30.0%
TACTACAAATGTGTAATCCA+AGG - chr4.3:84297457-84297476 MS.gene33668:intron 30.0%
TAGAAGACAAATCGATAAGA+CGG + chr4.3:84296134-84296153 None:intergenic 30.0%
TATGGACAGAAAGTAGTTAA+AGG - chr4.3:84297171-84297190 MS.gene33668:intron 30.0%
TGTGTGATTTATTGATGCTT+TGG - chr4.3:84296241-84296260 MS.gene33668:intron 30.0%
TTCTTCTTCATTGAGCAAAT+TGG + chr4.3:84296558-84296577 None:intergenic 30.0%
! TTATGATGATTTGGGAATAG+AGG - chr4.3:84296788-84296807 MS.gene33668:CDS 30.0%
!! CTTATAGACATAGAAGCATT+AGG + chr4.3:84296432-84296451 None:intergenic 30.0%
!! GATGAATTCTAGAAGCTTTT+TGG - chr4.3:84297759-84297778 MS.gene33668:intron 30.0%
!! GTTCAAAATATTGTTTCTGC+AGG - chr4.3:84297431-84297450 MS.gene33668:intron 30.0%
!!! ACATCACAAACTAGTTTTTC+TGG - chr4.3:84296759-84296778 MS.gene33668:CDS 30.0%
AATCAGAAGAAGATGGATAC+AGG - chr4.3:84296463-84296482 MS.gene33668:intron 35.0%
AGCTATTCTTATTCCACAGA+AGG - chr4.3:84297063-84297082 MS.gene33668:CDS 35.0%
ATGGCTTCTGATCTTTCTTT+GGG - chr4.3:84296717-84296736 MS.gene33668:CDS 35.0%
CTGATGTGGCTAACATTAAA+CGG - chr4.3:84295997-84296016 MS.gene33668:CDS 35.0%
GAAGAAAGTTGAAAGGTCTT+TGG - chr4.3:84296572-84296591 MS.gene33668:intron 35.0%
GCAGTAATCACAACATATGA+AGG - chr4.3:84297526-84297545 MS.gene33668:intron 35.0%
GCTATTCTTATTCCACAGAA+GGG - chr4.3:84297064-84297083 MS.gene33668:CDS 35.0%
GGAGGAGATTATGATGATTT+GGG - chr4.3:84296780-84296799 MS.gene33668:CDS 35.0%
GGTCACTATTATAAACCAGA+GGG + chr4.3:84296919-84296938 None:intergenic 35.0%
GTGCACTTGTAATAACTTCT+TGG + chr4.3:84296531-84296550 None:intergenic 35.0%
TACCAATTCGGAACAATACT+CGG - chr4.3:84297801-84297820 MS.gene33668:intron 35.0%
TATGCTCATCTTGACTTTCT+TGG - chr4.3:84295734-84295753 MS.gene33668:CDS 35.0%
TATGGAGAGAAACAAGTGAA+AGG - chr4.3:84296495-84296514 MS.gene33668:intron 35.0%
TATGGCTTCTGATCTTTCTT+TGG - chr4.3:84296716-84296735 MS.gene33668:CDS 35.0%
TGCTTATAATAGTGACCAGA+GGG + chr4.3:84296838-84296857 None:intergenic 35.0%
TGGAGGAGATTATGATGATT+TGG - chr4.3:84296779-84296798 MS.gene33668:CDS 35.0%
TTAAAGGAAATCCAAACCCA+AGG - chr4.3:84297187-84297206 MS.gene33668:intron 35.0%
TTATTTGCATACCTTGGGTT+TGG + chr4.3:84297201-84297220 None:intergenic 35.0%
TTCATCATGCAACAACTCTA+TGG - chr4.3:84296698-84296717 MS.gene33668:CDS 35.0%
TTGAAAGGTCTTTGGATGAT+GGG - chr4.3:84296580-84296599 MS.gene33668:intron 35.0%
TTGCTTATAATAGTGACCAG+AGG + chr4.3:84296839-84296858 None:intergenic 35.0%
! AAGGCATTAAATGCAAGTGT+GGG + chr4.3:84295791-84295810 None:intergenic 35.0%
! AGCTTTTTGGACAGATCAAT+TGG - chr4.3:84297772-84297791 MS.gene33668:intron 35.0%
! ATGTTTGACTTAGTCAACTG+AGG + chr4.3:84295934-84295953 None:intergenic 35.0%
! CTCTGGTTTATAATAGTGAC+CGG - chr4.3:84296918-84296937 MS.gene33668:CDS 35.0%
! GTTTGTGCTTCATGTTTTGT+TGG + chr4.3:84296396-84296415 None:intergenic 35.0%
!! AAAGGCATTAAATGCAAGTG+TGG + chr4.3:84295792-84295811 None:intergenic 35.0%
!! ACGGAAAGAGTACTTAACTT+CGG - chr4.3:84297367-84297386 MS.gene33668:intron 35.0%
!! GTACTGATCTTACCATCTTT+TGG + chr4.3:84296814-84296833 None:intergenic 35.0%
!! TTCTTGATGATGGATATAGG+TGG - chr4.3:84297142-84297161 MS.gene33668:CDS 35.0%
!!! TCACAAACTAGTTTTTCTGG+AGG - chr4.3:84296762-84296781 MS.gene33668:CDS 35.0%
AATGTGTCCTGTGTCTTTAG+TGG + chr4.3:84296321-84296340 None:intergenic 40.0%
CACTATTATAAACCAGAGGG+TGG + chr4.3:84296916-84296935 None:intergenic 40.0%
CATAACCATGATGTACCTCT+AGG - chr4.3:84297553-84297572 MS.gene33668:intron 40.0%
CGGTCACTATTATAAACCAG+AGG + chr4.3:84296920-84296939 None:intergenic 40.0%
CTTGAAATTCCTCTTCCTAG+AGG + chr4.3:84297571-84297590 None:intergenic 40.0%
GAATAGTTAGTCACTGCTGA+AGG + chr4.3:84297655-84297674 None:intergenic 40.0%
GAGTTGTTGCATGATGAAGA+AGG + chr4.3:84296696-84296715 None:intergenic 40.0%
GCACAAAAAAATACACCCTC+CGG + chr4.3:84296940-84296959 None:intergenic 40.0%
GGATACAGGTGGAGAAAATA+TGG - chr4.3:84296477-84296496 MS.gene33668:intron 40.0%
GGATATAGGTGGAGGAAATA+TGG - chr4.3:84297153-84297172 MS.gene33668:CDS 40.0%
GGTTTATAATAGTGACCGGA+GGG - chr4.3:84296922-84296941 MS.gene33668:CDS 40.0%
GTAGTTTGAACCACAACTCT+AGG + chr4.3:84297108-84297127 None:intergenic 40.0%
GTTGAAAGGTCTTTGGATGA+TGG - chr4.3:84296579-84296598 MS.gene33668:intron 40.0%
TACCACTTGAAACATGCTTG+TGG + chr4.3:84295645-84295664 None:intergenic 40.0%
TGGTTTATAATAGTGACCGG+AGG - chr4.3:84296921-84296940 MS.gene33668:CDS 40.0%
TGTTAAGGAACCTAGAGTTG+TGG - chr4.3:84297095-84297114 MS.gene33668:CDS 40.0%
TTCCACAAGCATGTTTCAAG+TGG - chr4.3:84295640-84295659 MS.gene33668:CDS 40.0%
! AGAAGGGTGTAGAACTGTTA+AGG - chr4.3:84297080-84297099 MS.gene33668:CDS 40.0%
! CTTTTTGTACACTGAGGCTT+AGG + chr4.3:84296645-84296664 None:intergenic 40.0%
! GCTCTTCTTTTTGTACACTG+AGG + chr4.3:84296651-84296670 None:intergenic 40.0%
! GTTTTCTCACAGTACAACCT+TGG + chr4.3:84297477-84297496 None:intergenic 40.0%
! TTCTGATCTTTCTTTGGGAG+AGG - chr4.3:84296722-84296741 MS.gene33668:CDS 40.0%
!! TTGATGATGGATATAGGTGG+AGG - chr4.3:84297145-84297164 MS.gene33668:CDS 40.0%
AACAGTTCTACACCCTTCTG+TGG + chr4.3:84297079-84297098 None:intergenic 45.0%
CAGAAGAAGATGGATACAGG+TGG - chr4.3:84296466-84296485 MS.gene33668:intron 45.0%
GGAAGAACCACTAAAGACAC+AGG - chr4.3:84296311-84296330 MS.gene33668:CDS 45.0%
TGGGAATAGAGGCCAAAAGA+TGG - chr4.3:84296799-84296818 MS.gene33668:CDS 45.0%
TTATAACGTAGACCACCCTC+TGG - chr4.3:84296901-84296920 MS.gene33668:CDS 45.0%
TTGTACACTGAGGCTTAGGA+TGG + chr4.3:84296641-84296660 None:intergenic 45.0%
! AGCCGAGTATTGTTCCGAAT+TGG + chr4.3:84297806-84297825 None:intergenic 45.0%
! CATGATGTACCTCTAGGAAG+AGG - chr4.3:84297559-84297578 MS.gene33668:intron 45.0%
! CTCTTCCTAGAGGTACATCA+TGG + chr4.3:84297561-84297580 None:intergenic 45.0%
!!! TTTTATATTTATTCAATAAA+TGG - chr4.3:84296868-84296887 MS.gene33668:CDS 5.0%
! GTCACTGCTGAAGGCCTTAT+AGG + chr4.3:84297646-84297665 None:intergenic 50.0%
GGTAAGATCAGTACGCCCTC+TGG - chr4.3:84296820-84296839 MS.gene33668:CDS 55.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 84295620 84297870 84295620 ID=MS.gene33668
chr4.3 mRNA 84295620 84297870 84295620 ID=MS.gene33668.t1;Parent=MS.gene33668
chr4.3 exon 84297829 84297870 84297829 ID=MS.gene33668.t1.exon1;Parent=MS.gene33668.t1
chr4.3 CDS 84297829 84297870 84297829 ID=cds.MS.gene33668.t1;Parent=MS.gene33668.t1
chr4.3 exon 84296670 84297178 84296670 ID=MS.gene33668.t1.exon2;Parent=MS.gene33668.t1
chr4.3 CDS 84296670 84297178 84296670 ID=cds.MS.gene33668.t1;Parent=MS.gene33668.t1
chr4.3 exon 84296282 84296449 84296282 ID=MS.gene33668.t1.exon3;Parent=MS.gene33668.t1
chr4.3 CDS 84296282 84296449 84296282 ID=cds.MS.gene33668.t1;Parent=MS.gene33668.t1
chr4.3 exon 84295620 84296037 84295620 ID=MS.gene33668.t1.exon4;Parent=MS.gene33668.t1
chr4.3 CDS 84295620 84296037 84295620 ID=cds.MS.gene33668.t1;Parent=MS.gene33668.t1
Gene Sequence

>MS.gene33668

ATGCATGATCTCTTTCAATCTTCCACAAGCATGTTTCAAGTGGTAAGTTGTATATTTCTTTGACCATAACTTTTACTTAAAACAAATATGATTATGTGTACATGTCTTGTTTTATATGCTCATCTTGACTTTCTTGGTCAAAATTTAATTATTAATTCGTATCTGTGTCCCACACTTGCATTTAATGCCTTTGTTTATTGCTCTTCTTTTGATTTTTTCTTGTTTTTTTTAATTAGTCAAATTTTCTCTAATTTTGTCTGTACAAGATAGTTTGAATAGTTTTGGCAATTAGAAACTTGACTAATACATATCCTCAGTTGACTAAGTCAAACATAGTATTAGTGTTAAAATTATTCTTAAAAGAAACATTTTTAAAGCTGATGTGGCTAACATTAAACGGCATTGAACCTTAATTGCATTTCATTAATGATAATATGTTGGATACGATTTAGAATATCATTGAAAATGTGAATACGAGTTAAAAATGTGCTCAATATTGCAAGAGCATAAACCGTCTTATCGATTTGTCTTCTAATAAACTCAACATACGAGATAAGCTAAAATACTACAATATTCTATAAAGATATTATAAGATATTTTCTAATATTCTACCACAAACAATGTGTGATTTATTGATGCTTTGGAATATATGCAAATCTTGTAATTTACTAATACTTGTTCAACTTGAACAGGAAGAACCACTAAAGACACAGGACACATTGATATTCAATGAATCTACAAAGCAAACAAATTTTTCATTTGAAGGACAAGGACCAACAAAACATGAAGCACAAACTAATTCTTCAGTTCCTAATGCTTCTATGTCTATAAGAGAACAAAGAAAATCAGAAGAAGATGGATACAGGTGGAGAAAATATGGAGAGAAACAAGTGAAAGGAAGTGAAAATCCAAGAAGTTATTACAAGTGCACTAATCCAATTTGCTCAATGAAGAAGAAAGTTGAAAGGTCTTTGGATGATGGGCAAATTACTCAAATAGTATATAAAGGAAGTCATAACCATCCTAAGCCTCAGTGTACAAAAAGAAGAGCAAATTCTCAACATATTCATCAACCTTCTTCATCATGCAACAACTCTATGGCTTCTGATCTTTCTTTGGGAGAGGATGATTTTGATCAAACATCACAAACTAGTTTTTCTGGAGGAGATTATGATGATTTGGGAATAGAGGCCAAAAGATGGTAAGATCAGTACGCCCTCTGGTCACTATTATAAGCAAATATTTATATTTTATATTTATTCAATAAATGGTATATGTGGTTTATAACGTAGACCACCCTCTGGTTTATAATAGTGACCGGAGGGTGTATTTTTTTGTGCTTGCAATGCTAATTTGCATGAAGTACCAATATTTTTGAGGTTGATTTCAATATCACTAATTTATGATTCTCATTATTGTAGGAAAGGAGAGAATGAAAATGATAGCTATTCTTATTCCACAGAAGGGTGTAGAACTGTTAAGGAACCTAGAGTTGTGGTTCAAACTACAAGTGAAATTGATATTCTTGATGATGGATATAGGTGGAGGAAATATGGACAGAAAGTAGTTAAAGGAAATCCAAACCCAAGGTATGCAAATAATACAACTTACGGAAACAAACAAATGCCATTTAGTTATAGTTATAGATAATTGCTTCTAAATGATATAATATACTACGGAACAAATCAACATAATTAATCATTTTCTTAAAAATCGTGCACAAATTTTAAACGACTATTATTTTTAGACGGAAAGAGTACTTAACTTCGGAGTTCTTGATATTTGTTACCAACCCTATATGATAATAACTTGTTCAAAATATTGTTTCTGCAGGAGCTACTACAAATGTGTAATCCAAGGTTGTACTGTGAGAAAACATGTTGAGAGAGCTTCACATGATATTAAAGCAGTAATCACAACATATGAAGGGAAACATAACCATGATGTACCTCTAGGAAGAGGAATTTCAAGCAGTAGCATAAACAACAGAACTTCTCTTAACAACAATACATGTAATGTTACACCTATAAGGCCTTCAGCAGTGACTAACTATTCTAGCTTAGCAAATTTTACAAATTCACTTCATGATTCAAAGCTATCAAATTCTGAAAATCAAGAACATTTTCAGCTTGACATGTTGATGAATTCTAGAAGCTTTTTGGACAGATCAATTGGTTCAAATACCAATTCGGAACAATACTCGGCTAAAGATGACTCATTCTTTCAATCTTTTGTATTGAAGAACTTTTAA
Protein sequence

>MS.gene33668.t1

MHDLFQSSTSMFQVEEPLKTQDTLIFNESTKQTNFSFEGQGPTKHEAQTNSSVPNASMSIREQRKSEEDGYRWRKYGEKQVKGSENPRSYYKCTNPICSMKKKVERSLDDGQITQIVYKGSHNHPKPQCTKRRANSQHIHQPSSSCNNSMASDLSLGEDDFDQTSQTSFSGGDYDDLGIEAKRWKGENENDSYSYSTEGCRTVKEPRVVVQTTSEIDILDDGYRWRKYGQKVVKGNPNPRSYYKCVIQGCTVRKHVERASHDIKAVITTYEGKHNHDVPLGRGISSSSINNRTSLNNNTCNVTPIRPSAVTNYSSLANFTNSLHDSKLSNSENQEHFQLDMLMNSRSFLDRSIGSNTNSEQYSAKDDSFFQSFVLKNF