AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene051959


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051959.t1 MTR_2g099690 98.938 1224 13 0 1 1224 1 1224 0.0 2528
MS.gene051959.t1 MTR_2g099690 98.785 905 11 0 1 905 1 905 0.0 1854
MS.gene051959.t1 MTR_2g099690 98.276 870 15 0 1 870 1 870 0.0 1777
MS.gene051959.t1 MTR_8g018290 83.219 876 145 2 349 1223 3 877 0.0 1544
MS.gene051959.t1 MTR_8g018290 82.559 883 145 3 349 1223 3 884 0.0 1537
MS.gene051959.t1 MTR_4g112430 56.436 1212 484 8 8 1205 6 1187 0.0 1391
MS.gene051959.t1 MTR_8g069920 55.330 1229 500 11 10 1215 8 1210 0.0 1387
MS.gene051959.t1 MTR_6g006910 55.317 1213 486 8 8 1190 6 1192 0.0 1359
MS.gene051959.t1 MTR_0021s0360 54.598 1218 502 11 7 1208 1 1183 0.0 1338
MS.gene051959.t1 MTR_3g037330 55.236 1184 478 11 10 1177 5 1152 0.0 1330
MS.gene051959.t1 MTR_3g037330 55.516 1115 438 9 85 1177 4 1082 0.0 1264
MS.gene051959.t1 MTR_5g037210 44.291 1156 583 14 35 1174 19 1129 0.0 968
MS.gene051959.t1 MTR_8g044210 36.395 1154 647 25 40 1172 69 1156 0.0 668
MS.gene051959.t1 MTR_7g073480 35.684 1191 644 25 40 1173 142 1267 0.0 666
MS.gene051959.t1 MTR_3g007240 34.918 1157 657 20 40 1177 120 1199 0.0 664
MS.gene051959.t1 MTR_3g007240 36.133 869 461 16 40 886 120 916 2.53e-156 492
MS.gene051959.t1 MTR_8g062150 44.652 589 277 10 35 617 39 584 8.69e-154 474
MS.gene051959.t1 MTR_2g090610 32.932 747 441 22 438 1167 321 1024 9.10e-106 360
MS.gene051959.t1 MTR_2g090610 37.170 417 238 9 41 448 3 404 4.51e-66 244
MS.gene051959.t1 MTR_2g090610 33.489 642 369 19 451 1072 330 933 1.97e-95 328
MS.gene051959.t1 MTR_2g090610 37.170 417 238 9 41 448 3 404 5.15e-67 245
MS.gene051959.t1 MTR_2g056040 60.938 64 25 0 710 773 1 64 3.77e-21 89.4
MS.gene051959.t1 MTR_8g027160 25.328 458 249 16 568 997 451 843 2.62e-18 91.7
MS.gene051959.t1 MTR_8g027160 26.005 423 223 15 568 962 451 811 3.64e-18 91.3
MS.gene051959.t1 MTR_8g027160 26.374 364 181 13 568 904 451 754 1.99e-15 82.0
MS.gene051959.t1 MTR_8g027160 26.374 364 181 13 568 904 451 754 2.46e-15 81.6
MS.gene051959.t1 MTR_4g043690 21.790 514 293 16 608 1106 549 968 1.08e-12 73.2
MS.gene051959.t1 MTR_8g090125 27.311 238 123 5 545 772 455 652 2.25e-12 72.4
MS.gene051959.t1 MTR_0005s0140 21.790 514 293 16 608 1106 464 883 2.86e-12 72.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene051959.t1 AT1G17500 75.472 1219 280 6 6 1222 5 1206 0.0 1918
MS.gene051959.t1 AT1G17500 75.472 1219 280 6 6 1222 5 1206 0.0 1918
MS.gene051959.t1 AT1G54280 74.156 1215 308 4 14 1222 13 1227 0.0 1897
MS.gene051959.t1 AT1G54280 74.156 1215 308 4 14 1222 13 1227 0.0 1897
MS.gene051959.t1 AT1G54280 74.156 1215 308 4 14 1222 13 1227 0.0 1897
MS.gene051959.t1 AT1G72700 74.569 1219 303 5 6 1222 5 1218 0.0 1895
MS.gene051959.t1 AT1G72700 74.569 1219 303 5 6 1222 5 1218 0.0 1895
MS.gene051959.t1 AT1G72700 74.569 1219 303 5 6 1222 5 1218 0.0 1895
MS.gene051959.t1 AT3G13900 74.220 1218 300 6 14 1222 13 1225 0.0 1880
MS.gene051959.t1 AT3G13900 75.133 937 219 6 14 941 13 944 0.0 1442
MS.gene051959.t1 AT3G25610 56.612 1210 478 9 11 1206 11 1187 0.0 1409
MS.gene051959.t1 AT1G13210 56.219 1222 485 12 1 1206 1 1188 0.0 1390
MS.gene051959.t1 AT1G68710 56.328 1209 490 8 11 1208 13 1194 0.0 1390
MS.gene051959.t1 AT1G68710 56.328 1209 490 8 11 1208 13 1194 0.0 1390
MS.gene051959.t1 AT1G68710 55.223 1235 489 9 11 1208 13 1220 0.0 1378
MS.gene051959.t1 AT3G27870 54.805 1228 490 10 8 1216 6 1187 0.0 1377
MS.gene051959.t1 AT3G13900 74.144 905 220 6 14 909 13 912 0.0 1369
MS.gene051959.t1 AT1G26130 55.135 1188 481 7 5 1178 7 1156 0.0 1351
MS.gene051959.t1 AT1G26130 55.004 1189 482 8 5 1178 7 1157 0.0 1349
MS.gene051959.t1 AT1G26130 55.004 1189 482 8 5 1178 7 1157 0.0 1349
MS.gene051959.t1 AT1G26130 55.004 1189 482 8 5 1178 7 1157 0.0 1349
MS.gene051959.t1 AT3G27870 57.017 1019 386 8 8 1008 6 990 0.0 1181
MS.gene051959.t1 AT3G27870 55.096 1040 405 8 195 1216 1 996 0.0 1180
MS.gene051959.t1 AT1G59820 44.928 1173 584 15 35 1193 31 1155 0.0 1004
MS.gene051959.t1 AT5G04930 35.882 1151 630 23 40 1167 67 1132 0.0 677
MS.gene051959.t1 AT5G44240 32.882 739 430 26 451 1167 330 1024 1.61e-105 359
MS.gene051959.t1 AT5G44240 36.473 414 245 6 41 448 3 404 2.80e-63 236
MS.gene051959.t1 AT5G44240 32.882 739 430 26 451 1167 362 1056 2.41e-105 360
MS.gene051959.t1 AT5G44240 36.364 418 248 6 37 448 31 436 7.78e-64 238
MS.gene051959.t1 AT3G57330 21.913 575 329 24 607 1163 539 1011 1.69e-13 75.9
MS.gene051959.t1 AT3G57330 24.181 397 204 13 607 990 484 796 2.20e-13 75.5

Find 304 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCACTGCTCTTATTCTTTA+TGG -0.004187 2.2:+3335028 MS.gene051959:CDS
ATCAAAACCAAATCCCTTTA+TGG 0.183658 2.2:-3335482 None:intergenic
CTTGTAGCTGCTAGAGAATT+TGG 0.196719 2.2:+3335667 MS.gene051959:CDS
TCTTGTAGTACTTGATTTCT+TGG 0.198980 2.2:-3339972 None:intergenic
CTTTGACTGGTATAGAATAT+TGG 0.203414 2.2:+3339528 MS.gene051959:CDS
GCCATCTGAAGTTTGCTTAC+AGG 0.205304 2.2:+3339383 MS.gene051959:CDS
TCTAGGCATTTGAATGAATA+TGG 0.222551 2.2:+3336377 MS.gene051959:CDS
CTCAAGCTGGTCTCAAGATC+TGG 0.246247 2.2:+3336709 MS.gene051959:CDS
ACTGAGCATGATTGCTCCTT+TGG 0.248742 2.2:+3334265 MS.gene051959:CDS
CTTTATGGAAACTAGCTTTC+CGG 0.248782 2.2:-3334367 None:intergenic
TTGCTCCCGCTCCTATTTAT+TGG 0.255761 2.2:+3339854 MS.gene051959:CDS
AAACATAATAGCATTGTATT+TGG 0.263696 2.2:-3334144 None:intergenic
GCATGTAACAGTTACTAAAA+TGG 0.265482 2.2:-3339884 None:intergenic
CAAGCACTTCAACCAATATT+TGG 0.271782 2.2:-3339834 None:intergenic
CCAGCAAATCCAAGTTTCTT+AGG 0.274337 2.2:-3334992 None:intergenic
TAAGAATGGAAAGAAGTATT+TGG 0.285459 2.2:+3336346 MS.gene051959:CDS
AAGTGTAAAGATTGGGATTT+GGG 0.289230 2.2:-3334643 None:intergenic
CCTAAGAAACTTGGATTTGC+TGG 0.290890 2.2:+3334992 MS.gene051959:CDS
TACCTGTTTCTCTTATTATA+TGG 0.291898 2.2:+3339778 MS.gene051959:CDS
TGAGACAGTTGTTACTTCTA+AGG 0.292034 2.2:+3335438 MS.gene051959:CDS
TTTGACTGGTATAGAATATT+GGG 0.293664 2.2:+3339529 MS.gene051959:CDS
TGCTAATATATACTTCCTTT+TGG 0.296160 2.2:+3334202 MS.gene051959:CDS
CCCCAAAGTGGTGGTATTTA+CGG 0.309035 2.2:+3334942 MS.gene051959:CDS
CAATGTTCACCTGCATCATC+TGG 0.314705 2.2:+3339671 MS.gene051959:CDS
CATGACTGCGTACCAAATAT+TGG 0.316415 2.2:+3339822 MS.gene051959:CDS
CGCGAAAGAATTTCTGCTTC+TGG 0.317534 2.2:+3335730 MS.gene051959:CDS
CGCGTACGACAACACTTGAT+TGG 0.318726 2.2:-3335711 None:intergenic
GAGGCCTTTGCGGGCTTCTC+TGG 0.326225 2.2:+3339267 MS.gene051959:CDS
GTCAATCGGTTTATAATGAT+TGG 0.339629 2.2:+3339289 MS.gene051959:CDS
TGAGGTTGTGAAGGTATTAC+AGG 0.340949 2.2:+3335084 MS.gene051959:CDS
AAAGTGTAAAGATTGGGATT+TGG 0.341160 2.2:-3334644 None:intergenic
GCCGTAAATACCACCACTTT+GGG 0.344504 2.2:-3334943 None:intergenic
TAATAAATGATATCGCTATA+AGG 0.346147 2.2:-3334883 None:intergenic
TGCCTCACAATTGATGAATC+TGG 0.348326 2.2:+3337108 MS.gene051959:CDS
AGGCCTGCCATAAAGGGATT+TGG 0.348487 2.2:+3335475 MS.gene051959:CDS
TGCCACGGGTGAGGAGGATT+AGG 0.351298 2.2:+3333949 MS.gene051959:CDS
AGGAACACAGAGTATGTCTA+TGG 0.354605 2.2:+3334743 MS.gene051959:CDS
TCAAGCATTGCCTCTCTATC+AGG 0.358591 2.2:-3336503 None:intergenic
ATGGTTGCTGTCCAATAAAT+AGG 0.361944 2.2:-3339865 None:intergenic
GCCGGCTCATGAATGGTAAT+TGG 0.362433 2.2:+3335509 MS.gene051959:CDS
GGTCTCTCCATCTAAATTCA+TGG 0.366806 2.2:-3334528 None:intergenic
TGAGAAGGTATCAGATAGTA+TGG 0.366820 2.2:+3336523 MS.gene051959:CDS
TGGAGCAATCTTTACACGTT+TGG 0.375414 2.2:+3333984 MS.gene051959:CDS
AGTATTTGGAGACTACTTCT+AGG 0.377268 2.2:+3336360 MS.gene051959:CDS
TGCGGGCTTCTCTGGTCAAT+CGG 0.378820 2.2:+3339275 MS.gene051959:CDS
GAAAGAGAGTTGATTCTTGT+TGG 0.378967 2.2:+3336545 MS.gene051959:CDS
CTCTCTCTATGTTTCAATTG+AGG 0.381245 2.2:+3335066 MS.gene051959:CDS
CCATGGGATTAAAACACCTT+TGG 0.388464 2.2:-3339936 None:intergenic
AAAGAGAGTTGATTCTTGTT+GGG 0.393775 2.2:+3336546 MS.gene051959:CDS
TGCATGTAGTTTACTTCGAC+AGG 0.396919 2.2:+3336902 MS.gene051959:CDS
CTCAAGATCTGGGTCTTGAC+AGG 0.397649 2.2:+3336720 MS.gene051959:CDS
CAGTATGATCCTAAGAAACT+TGG 0.400443 2.2:+3334983 MS.gene051959:CDS
TGCCATATAATAAGAGAAAC+AGG 0.402768 2.2:-3339780 None:intergenic
AACACCTTTGGAACGATATG+TGG 0.408763 2.2:-3339924 None:intergenic
GGCACCTCATCGGCAGTATT+CGG 0.408943 2.2:-3334017 None:intergenic
GGATCAAAGGCCTGCCATAA+AGG 0.411132 2.2:+3335468 MS.gene051959:CDS
GGTGTTGTATCCATGTAAAA+TGG 0.413146 2.2:-3339726 None:intergenic
ATACACGGTTCTCGAGTAAC+CGG 0.413320 2.2:-3334057 None:intergenic
ACCATCCTCTCCGATAAAAC+TGG 0.415442 2.2:+3335208 MS.gene051959:CDS
AGTGGACTGAAAGGTGAAAT+TGG 0.420291 2.2:-3334245 None:intergenic
CCCAACAAAAGTGTAAAGAT+TGG 0.421152 2.2:-3334651 None:intergenic
CGTGGCAGAAAATTATGGTT+GGG 0.423006 2.2:+3334414 MS.gene051959:CDS
GGCTCATTGTCAAGGCAATC+TGG 0.425567 2.2:-3339705 None:intergenic
GTGGAAACCATGAATTTAGA+TGG 0.427169 2.2:+3334521 MS.gene051959:CDS
CTTGAAGGTGAAAAGATCAT+TGG 0.428135 2.2:+3334553 MS.gene051959:CDS
GTCAAATTTGAATGAAGAGT+TGG 0.430916 2.2:+3335174 MS.gene051959:CDS
TTTACACGTTTGGTTGTCTT+CGG 0.431725 2.2:+3333994 MS.gene051959:CDS
CGGAAAGCTAGTTTCCATAA+AGG 0.435290 2.2:+3334368 MS.gene051959:CDS
TAAAAGCTCCATCATTATCA+AGG 0.438639 2.2:-3334589 None:intergenic
CCAACAAAAGTGTAAAGATT+GGG 0.441447 2.2:-3334650 None:intergenic
GCGTACGACAACACTTGATT+GGG 0.441871 2.2:-3335710 None:intergenic
TGTTCCTGAGCTTTGAATCT+CGG 0.442100 2.2:-3334727 None:intergenic
CATCATACATGTGAAGGTCT+TGG 0.443115 2.2:-3335120 None:intergenic
GATCAAAGGCCTGCCATAAA+GGG 0.443990 2.2:+3335469 MS.gene051959:CDS
GGGAAGACCACTTTAGCAAT+AGG 0.443998 2.2:+3337992 MS.gene051959:CDS
CAGCAGCCATGTCTGCAGTC+TGG 0.445464 2.2:-3339639 None:intergenic
AGGTTAGTGAAAGAAGGAAC+TGG 0.445948 2.2:+3337971 MS.gene051959:CDS
GATCATACTGATATTCAATC+TGG 0.446440 2.2:-3334970 None:intergenic
CAAGTCGTGGCAGAAAATTA+TGG 0.447244 2.2:+3334409 MS.gene051959:CDS
AACAAAATGACTTCAGCATT+GGG 0.450150 2.2:-3335541 None:intergenic
TCAGAATCAGTGATCAATGA+TGG 0.455498 2.2:+3336957 MS.gene051959:CDS
CATCAAGCTTTCTGTAAGCC+AGG 0.456979 2.2:-3336424 None:intergenic
TAGGTTCCTTCAAGATGTTA+AGG 0.457323 2.2:+3334337 MS.gene051959:CDS
TCAAATTTGAATGAAGAGTT+GGG 0.458750 2.2:+3335175 MS.gene051959:CDS
CAAGAGTGGAAGCAACGATC+AGG 0.458862 2.2:+3340070 MS.gene051959:CDS
GCCACGGGTGAGGAGGATTA+GGG 0.459309 2.2:+3333950 MS.gene051959:CDS
GTATAGAATATTGGGATGGA+TGG 0.460979 2.2:+3339537 MS.gene051959:CDS
GTATAAAATACTGAATCTGC+TGG 0.461340 2.2:+3335922 MS.gene051959:CDS
CAGAAAGCTAAGACAGCTGT+TGG 0.462153 2.2:+3336479 MS.gene051959:CDS
AACTGTTCAAACAGCGCCTT+AGG 0.462457 2.2:-3334170 None:intergenic
CAACAAAATGACTTCAGCAT+TGG 0.465280 2.2:-3335542 None:intergenic
GCAAGACAGGAAACAAAGAT+TGG 0.466027 2.2:+3340039 MS.gene051959:CDS
TAAGCTCGGGAATGGCAGTA+TGG 0.467232 2.2:-3335588 None:intergenic
GGCCGTAAATACCACCACTT+TGG 0.467312 2.2:-3334944 None:intergenic
TTGAATGAATATGGAGAGGT+GGG 0.467506 2.2:+3336386 MS.gene051959:CDS
TTACAAGAGAATTGCACAAA+TGG 0.468118 2.2:+3339030 MS.gene051959:CDS
TGGAAGACAAGCTGCAGAAA+GGG 0.468231 2.2:+3336579 MS.gene051959:CDS
CGCTGTTTGAACAGTTTCGA+AGG 0.468874 2.2:+3334177 MS.gene051959:CDS
TCCATTGCTGGAATTTCCTA+TGG 0.469073 2.2:+3335268 MS.gene051959:CDS
ACAAGAAAAGCCCCTTCATC+AGG 0.469630 2.2:-3335649 None:intergenic
ACCAATTACCATTCATGAGC+CGG 0.470095 2.2:-3335510 None:intergenic
TTGTGAAGGTATTACAGGCC+AGG 0.483058 2.2:+3335089 MS.gene051959:CDS
CAAGAAGCTGACATTGGTGT+TGG 0.483165 2.2:+3338043 MS.gene051959:CDS
GGATATAGTGAAAGTAGAAA+AGG 0.483379 2.2:+3334436 MS.gene051959:CDS
TCCATCATTATCAAGGGAAA+AGG 0.483733 2.2:-3334582 None:intergenic
TAATTTCCCCATGCAAAAGA+AGG 0.484623 2.2:+3335369 MS.gene051959:CDS
TTTGAATGAAGAGTTGGGTC+AGG 0.487726 2.2:+3335180 MS.gene051959:CDS
TTTGACGTCCGTGCTTCAGC+AGG 0.487803 2.2:-3335157 None:intergenic
TAAGAGAAACAGGTACCAAC+TGG 0.488361 2.2:-3339770 None:intergenic
GATGACAGCCGGCTCATGAA+TGG 0.491054 2.2:+3335502 MS.gene051959:CDS
CAGGTTTATCCTCTTGATCC+TGG 0.491102 2.2:+3334692 MS.gene051959:CDS
GATTAACCTTAACATCTTGA+AGG 0.491796 2.2:-3334343 None:intergenic
TGCAGCAAGTTCAACTTCAC+TGG 0.492145 2.2:-3335299 None:intergenic
TACTGATATTCAATCTGGTC+GGG 0.492366 2.2:-3334965 None:intergenic
ATTCATCAATTGTGAGGCAT+TGG 0.492718 2.2:-3337104 None:intergenic
CACATGTATGATGAAGAAAC+CGG 0.494332 2.2:+3335130 MS.gene051959:CDS
CAATATTTGGTACGCAGTCA+TGG 0.495007 2.2:-3339821 None:intergenic
TATAGAATATTGGGATGGAT+GGG 0.495640 2.2:+3339538 MS.gene051959:CDS
ACCATCACCTATTGCTAAAG+TGG 0.496848 2.2:-3337999 None:intergenic
GAGGTGCCTCATCCACTTCA+AGG 0.497127 2.2:+3334032 MS.gene051959:CDS
TGGAAACTGCAATCAACATT+GGG 0.497583 2.2:+3336751 MS.gene051959:CDS
GTTGGAATCAGCGGGGTTGA+AGG 0.500123 2.2:+3338061 MS.gene051959:CDS
GAACTTTGAGTACGAACGTC+AGG 0.500582 2.2:+3334673 MS.gene051959:CDS
ACGAGAGGCAAGCAGCCAAA+AGG 0.502517 2.2:-3334217 None:intergenic
CTGCAGAAGAAGCAAACATC+AGG 0.503128 2.2:+3340108 MS.gene051959:CDS
TATGGCAAACGGCTAGTATC+CGG 0.503434 2.2:-3335570 None:intergenic
GACAATAGAAGCAAGTCAGC+TGG 0.505613 2.2:-3334470 None:intergenic
GACCAAGCATTTCGTCTGAA+TGG 0.505754 2.2:+3339616 MS.gene051959:CDS
CCGTGTATCTCCCAAGCAAA+AGG 0.506483 2.2:+3337255 MS.gene051959:CDS
CTAAGAAACTTGGATTTGCT+GGG 0.506852 2.2:+3334993 MS.gene051959:CDS
ACATTGGTGTTGGAATCAGC+GGG 0.507387 2.2:+3338053 MS.gene051959:CDS
ATGGAAACTGCAATCAACAT+TGG 0.509063 2.2:+3336750 MS.gene051959:CDS
ATATTGGGATGGATGGGGAA+TGG 0.509388 2.2:+3339544 MS.gene051959:CDS
TTTGATAGACTATCTAAGAA+TGG 0.509862 2.2:+3336332 MS.gene051959:CDS
AACGATATGTGGGCAAGATA+AGG 0.509978 2.2:-3339913 None:intergenic
TCAAGCTGGTCTCAAGATCT+GGG 0.510110 2.2:+3336710 MS.gene051959:CDS
GGTCTTGACAGGGGATAAGA+TGG 0.511012 2.2:+3336731 MS.gene051959:CDS
CTAAGGATGGTGAGGATCAA+AGG 0.512008 2.2:+3335455 MS.gene051959:CDS
ATGAACAAGAGTACTCTGAT+TGG 0.513220 2.2:+3336444 MS.gene051959:CDS
CCGTGCTTCAGCAGGAGTCC+CGG 0.513618 2.2:-3335149 None:intergenic
ATATCATTTATTAGTTCAGT+AGG 0.514244 2.2:+3334893 MS.gene051959:CDS
GAGCGGCTTCTGGTAGTCCA+TGG 0.515390 2.2:+3338998 MS.gene051959:CDS
TTGGATAATGTGATGATCCA+TGG 0.517598 2.2:-3339953 None:intergenic
AAGCTGAATCACCTGATGAA+GGG 0.520268 2.2:+3335638 MS.gene051959:CDS
TCTGCATGACTTTGCTGTCG+TGG 0.520589 2.2:-3334784 None:intergenic
TCTTGTTGGGGCTACTGCTG+TGG 0.521822 2.2:+3336559 MS.gene051959:CDS
TCGTTGCCTGTCATTTCACT+TGG 0.521994 2.2:+3339342 MS.gene051959:CDS
TAGTATGGCAAAGGAAGCAC+TGG 0.526226 2.2:+3334304 MS.gene051959:CDS
TCTTGTAACACCAGTGTCCA+TGG 0.530877 2.2:-3339015 None:intergenic
GAGGTAAGATGCCACGGGTG+AGG 0.531710 2.2:+3333940 None:intergenic
TCCTCCGAGATTCAAAGCTC+AGG 0.532806 2.2:+3334723 MS.gene051959:CDS
CCCTTGGAGGTAAGATGCCA+CGG 0.532969 2.2:+3333934 None:intergenic
GTGGAAGACAAGCTGCAGAA+AGG 0.533612 2.2:+3336578 MS.gene051959:CDS
AGAAAGCTAAGACAGCTGTT+GGG 0.534274 2.2:+3336480 MS.gene051959:CDS
AACTTTAACCTGCAATCAGA+TGG 0.535595 2.2:+3335231 MS.gene051959:CDS
TGTAAAATGGCTCATTGTCA+AGG 0.536315 2.2:-3339713 None:intergenic
ATAGAATATTGGGATGGATG+GGG 0.536740 2.2:+3339539 MS.gene051959:CDS
ATTGATAAACTTGCTCAAGC+TGG 0.537669 2.2:+3336696 MS.gene051959:CDS
GGAGCGGTCTAAAGCAAGAC+AGG 0.538250 2.2:+3340026 MS.gene051959:CDS
GAATAAGAGCAGTGATCAGA+TGG 0.542203 2.2:-3335021 None:intergenic
GAAGGTGAAAAGATCATTGG+AGG 0.542802 2.2:+3334556 MS.gene051959:CDS
AAGAGAGTTGATTCTTGTTG+GGG 0.542957 2.2:+3336547 MS.gene051959:CDS
TGTCTTCAAGTTACGAGGAT+GGG 0.542987 2.2:+3334489 MS.gene051959:CDS
GAAGCTGAATCACCTGATGA+AGG 0.543503 2.2:+3335637 MS.gene051959:CDS
CAGCGGGGTTGAAGGTATGC+AGG 0.543612 2.2:+3338069 MS.gene051959:CDS
AAACCAAATCCCTTTATGGC+AGG 0.543947 2.2:-3335478 None:intergenic
AGATGGAGAGACCAACTTGA+AGG 0.544036 2.2:+3334538 MS.gene051959:CDS
CAACGATCAGGCAGCTGAAG+GGG 0.544149 2.2:+3340082 MS.gene051959:CDS
AAGGAAGAAGATGGCGAGGG+AGG 0.544489 2.2:-3339575 None:intergenic
CCTCATCCACTTCAAGGTCC+CGG 0.546459 2.2:+3334038 MS.gene051959:CDS
GTCAATAATTAACGCAAAAG+CGG 0.546996 2.2:-3337146 None:intergenic
AAGATCAACACATGTGGACG+AGG 0.547818 2.2:+3340004 MS.gene051959:CDS
ACGTGTAAAGATTGCTCCAC+CGG 0.548589 2.2:-3333980 None:intergenic
GTAACAAGGTTAGTGAAAGA+AGG 0.549223 2.2:+3337965 MS.gene051959:CDS
ATTGAAACATAGAGAGAGAT+GGG 0.549797 2.2:-3335061 None:intergenic
AATTTCTGCTTCTGGACAAG+TGG 0.549984 2.2:+3335738 MS.gene051959:CDS
ATCTCCCAAGCAAAAGGCCC+TGG 0.550219 2.2:+3337261 MS.gene051959:CDS
TTGCTCTCCTCATTAAGCTC+GGG 0.550483 2.2:-3335601 None:intergenic
AACACATGTGGACGAGGGAG+CGG 0.550746 2.2:+3340010 MS.gene051959:CDS
GGTCCTTGCTGATATAGTGC+AGG 0.551150 2.2:-3339493 None:intergenic
GTTGCTCTCCTCATTAAGCT+CGG 0.551554 2.2:-3335602 None:intergenic
AGTGATCAATGATGGGAAAG+AGG 0.551790 2.2:+3336965 MS.gene051959:CDS
GGATACAACACCTCTTTGTG+TGG 0.551898 2.2:+3339737 MS.gene051959:CDS
GTTGACAGCCCAGATGATGC+AGG 0.554129 2.2:-3339680 None:intergenic
TTGTCTTCAAGTTACGAGGA+TGG 0.555378 2.2:+3334488 MS.gene051959:CDS
TGTTTCAATTGAGGTTGTGA+AGG 0.555468 2.2:+3335075 MS.gene051959:CDS
AATGTTCACCTGCATCATCT+GGG 0.556690 2.2:+3339672 MS.gene051959:CDS
TCAAGATCTGGGTCTTGACA+GGG 0.557929 2.2:+3336721 MS.gene051959:CDS
TTTCTTCATCATACATGTGA+AGG 0.558556 2.2:-3335126 None:intergenic
CTTCTGGACAAGTGGTTGAA+AGG 0.560529 2.2:+3335746 MS.gene051959:CDS
CAGAATCAGTGATCAATGAT+GGG 0.561678 2.2:+3336958 MS.gene051959:CDS
GGCCATTCAGACGAAATGCT+TGG 0.562417 2.2:-3339618 None:intergenic
TTGAGGCTGGTTGCAATACA+CGG 0.563180 2.2:-3334072 None:intergenic
AATTGAAACATAGAGAGAGA+TGG 0.563890 2.2:-3335062 None:intergenic
TGCCATTCCCGAGCTTAATG+AGG 0.567067 2.2:+3335594 MS.gene051959:CDS
CTCCTCATTAAGCTCGGGAA+TGG 0.567643 2.2:-3335596 None:intergenic
TTCTGGTAGTCCATGGACAC+TGG 0.568443 2.2:+3339005 MS.gene051959:CDS
ACCTGTAAGCAAACTTCAGA+TGG 0.569161 2.2:-3339384 None:intergenic
GGAACACAGAGTATGTCTAT+GGG 0.569318 2.2:+3334744 MS.gene051959:CDS
GATGATGACAAGGAAGAAGA+TGG 0.569608 2.2:-3339584 None:intergenic
GCAACGATCAGGCAGCTGAA+GGG 0.569802 2.2:+3340081 MS.gene051959:CDS
GAATGGCCAGACTGCAGACA+TGG 0.570084 2.2:+3339633 MS.gene051959:CDS
TCAGACGAAATGCTTGGTCA+TGG 0.570355 2.2:-3339612 None:intergenic
AAAGAAGGGTAAAGCGCCAT+GGG 0.570699 2.2:+3335384 MS.gene051959:CDS
AGCTGAATCACCTGATGAAG+GGG 0.571217 2.2:+3335639 MS.gene051959:CDS
GCAGATGGCTACTGATCTTG+AGG 0.571660 2.2:+3335327 MS.gene051959:CDS
GCTGTCCAATAAATAGGAGC+GGG 0.571707 2.2:-3339859 None:intergenic
AAGGTCTTGGTTAATGAACC+TGG 0.572297 2.2:-3335107 None:intergenic
TTTGAATGAATATGGAGAGG+TGG 0.572838 2.2:+3336385 MS.gene051959:CDS
ACCATAGGAAATTCCAGCAA+TGG 0.574285 2.2:-3335269 None:intergenic
CCGGGACCTTGAAGTGGATG+AGG 0.574566 2.2:-3334038 None:intergenic
GATACAACACCTCTTTGTGT+GGG 0.575041 2.2:+3339738 MS.gene051959:CDS
GTGGCAGAAAATTATGGTTG+GGG 0.576119 2.2:+3334415 MS.gene051959:CDS
ACAGTTGTTACTTCTAAGGA+TGG 0.577696 2.2:+3335442 MS.gene051959:CDS
TGGATAATGTGATGATCCAT+GGG 0.578117 2.2:-3339952 None:intergenic
GGGTTTGAGAACATTAGCCC+TGG 0.578638 2.2:+3336406 MS.gene051959:CDS
GCAAGTTTATCAATGCATTG+AGG 0.579292 2.2:-3336687 None:intergenic
AAAAGAAGGGTAAAGCGCCA+TGG 0.579312 2.2:+3335383 MS.gene051959:CDS
CAGAAGAAGCAAACATCAGG+AGG 0.579645 2.2:+3340111 MS.gene051959:CDS
AGCTGTTGGGCCTGATAGAG+AGG 0.581244 2.2:+3336493 MS.gene051959:CDS
ATACTGATATTCAATCTGGT+CGG 0.581258 2.2:-3334966 None:intergenic
AGCAACGATCAGGCAGCTGA+AGG 0.581592 2.2:+3340080 MS.gene051959:CDS
ATCAAGCTTTCTGTAAGCCA+GGG 0.582698 2.2:-3336423 None:intergenic
ATCATGCTCAGTGGACTGAA+AGG 0.583141 2.2:-3334254 None:intergenic
TGTGGGGCAGCATAGCCAGT+TGG 0.583668 2.2:+3339755 MS.gene051959:CDS
GAGTAACCGGGACCTTGAAG+TGG 0.586282 2.2:-3334044 None:intergenic
GTAAGATGCCACGGGTGAGG+AGG 0.587556 2.2:+3333943 None:intergenic
TCGTGGCAGAAAATTATGGT+TGG 0.587670 2.2:+3334413 MS.gene051959:CDS
CCGGGACTCCTGCTGAAGCA+CGG 0.589978 2.2:+3335149 MS.gene051959:CDS
AAAGCGCCATGGGAAAATGT+TGG 0.592260 2.2:+3335394 MS.gene051959:CDS
GGGAATGGCAGTATGGCAAA+CGG 0.592556 2.2:-3335581 None:intergenic
GACATTGGTGTTGGAATCAG+CGG 0.594017 2.2:+3338052 MS.gene051959:CDS
AAAACTCCAAGTGAAATGAC+AGG 0.594056 2.2:-3339348 None:intergenic
AAAAGCTCCATCATTATCAA+GGG 0.594733 2.2:-3334588 None:intergenic
AGTATATGACCAGGATCAAG+AGG 0.594911 2.2:-3334701 None:intergenic
CTCCAGATTCATCAATTGTG+AGG 0.595088 2.2:-3337110 None:intergenic
AGAAATCAAGTACTACAAGA+AGG 0.595367 2.2:+3339975 MS.gene051959:CDS
ACTTGCTGCAGCAAAGCAGA+TGG 0.595451 2.2:+3335312 MS.gene051959:CDS
ATTAACGCAAAAGCGGCATG+TGG 0.596240 2.2:-3337139 None:intergenic
GATTGGATTCACAGCAAGAG+TGG 0.596498 2.2:+3340056 MS.gene051959:CDS
GGAGGATTAGGGCAAAGCTC+CGG 0.600021 2.2:+3333961 MS.gene051959:CDS
TGTGGGGCTTAGTATGGCAA+AGG 0.600655 2.2:+3334295 MS.gene051959:CDS
GGATTAGGGCAAAGCTCCGG+TGG 0.600898 2.2:+3333964 MS.gene051959:CDS
GCTGTTTGAACAGTTTCGAA+GGG 0.601231 2.2:+3334178 MS.gene051959:CDS
TTGCCCACATATCGTTCCAA+AGG 0.603188 2.2:+3339920 MS.gene051959:CDS
AAGTGGATGAGGCACCTCAT+CGG 0.603335 2.2:-3334027 None:intergenic
CGAGGATGGGATATGCTATG+TGG 0.604088 2.2:+3334502 MS.gene051959:CDS
ACACCTTTGGAACGATATGT+GGG 0.604290 2.2:-3339923 None:intergenic
TACACGGTTCTCGAGTAACC+GGG 0.605561 2.2:-3334056 None:intergenic
GCTAGTTTCCATAAAGGCAA+TGG 0.605915 2.2:+3334374 MS.gene051959:CDS
TGTTACTTCTAAGGATGGTG+AGG 0.606553 2.2:+3335447 MS.gene051959:CDS
TGACAAGGAAGAAGATGGCG+AGG 0.606726 2.2:-3339579 None:intergenic
ACAATTGATGAATCTGGAGA+AGG 0.607285 2.2:+3337114 MS.gene051959:CDS
GCCCTAATCCTCCTCACCCG+TGG 0.608679 2.2:-3333951 None:intergenic
GGTGATGGTGCAAATGATGT+TGG 0.612028 2.2:+3338013 MS.gene051959:CDS
CCTTGGAGGTAAGATGCCAC+GGG 0.614355 2.2:+3333935 None:intergenic
AATTTCCCCATGCAAAAGAA+GGG 0.615464 2.2:+3335370 MS.gene051959:CDS
AGCCCCACAACAAAAGCCAA+AGG 0.617159 2.2:-3334281 None:intergenic
TGCTGTCCAATAAATAGGAG+CGG 0.618500 2.2:-3339860 None:intergenic
TCTATTGTCTTCAAGTTACG+AGG 0.621402 2.2:+3334484 MS.gene051959:CDS
ACCACTTTAGCAATAGGTGA+TGG 0.621811 2.2:+3337998 MS.gene051959:CDS
GTGAAATTGGTGATAACGAG+AGG 0.622920 2.2:-3334232 None:intergenic
TAGAGAGGCAATGCTTGAGA+AGG 0.624541 2.2:+3336508 MS.gene051959:CDS
CATGGAAGATGATGATGACA+AGG 0.626795 2.2:-3339594 None:intergenic
TCCTGAGCTTTGAATCTCGG+AGG 0.627979 2.2:-3334724 None:intergenic
CTATGCTGCCCCACACAAAG+AGG 0.628115 2.2:-3339747 None:intergenic
GAAGAAGCAAACATCAGGAG+GGG 0.629665 2.2:+3340113 MS.gene051959:CDS
AAGATGTTAAGGTTAATCGC+CGG 0.632395 2.2:+3334348 MS.gene051959:CDS
TATGGCAAAGGAAGCACTGG+AGG 0.633216 2.2:+3334307 MS.gene051959:CDS
GGAAGACAAGCTGCAGAAAG+GGG 0.634885 2.2:+3336580 MS.gene051959:CDS
TTGACCAGAGAAGCCCGCAA+AGG 0.638038 2.2:-3339271 None:intergenic
ACTGGTATAGAATATTGGGA+TGG 0.638599 2.2:+3339533 MS.gene051959:CDS
GCATGTAGTTTACTTCGACA+GGG 0.639480 2.2:+3336903 MS.gene051959:CDS
GGTTAGTGAAAGAAGGAACT+GGG 0.639797 2.2:+3337972 MS.gene051959:CDS
TTCACTGGAACGTACACCAT+AGG 0.641957 2.2:-3335284 None:intergenic
GACAAGGAAGAAGATGGCGA+GGG 0.645828 2.2:-3339578 None:intergenic
TTAACGCAAAAGCGGCATGT+GGG 0.646609 2.2:-3337138 None:intergenic
ACTGCAGACATGGCTGCTGT+TGG 0.647157 2.2:+3339643 MS.gene051959:CDS
GTGATTGTACGTGATGAGGA+GGG 0.649981 2.2:+3335974 MS.gene051959:CDS
AGAAGAAGCAAACATCAGGA+GGG 0.655726 2.2:+3340112 MS.gene051959:CDS
TACGCAGTCATGGAATAATG+TGG 0.657449 2.2:-3339811 None:intergenic
ATGATTCAAGAAGCTGACAT+TGG 0.657865 2.2:+3338037 MS.gene051959:CDS
CCGTAAATACCACCACTTTG+GGG 0.659464 2.2:-3334942 None:intergenic
TCTCGGAGGAGTATATGACC+AGG 0.659575 2.2:-3334710 None:intergenic
TCGGCCGAATACTGCCGATG+AGG 0.665802 2.2:+3334013 MS.gene051959:CDS
GATGGCTACTGATCTTGAGG+AGG 0.666362 2.2:+3335330 MS.gene051959:CDS
AGTGATTGTACGTGATGAGG+AGG 0.670383 2.2:+3335973 MS.gene051959:CDS
CAAGATCTGGGTCTTGACAG+GGG 0.672992 2.2:+3336722 MS.gene051959:CDS
ACGTTGAAGATCAACACATG+TGG 0.677362 2.2:+3339998 MS.gene051959:CDS
CCTCAAAATAGAATATTGTG+AGG 0.679982 2.2:-3339248 None:intergenic
AGTATGAGACCCCAAAGTGG+TGG 0.682190 2.2:+3334933 MS.gene051959:CDS
GCATTTGAATGAATATGGAG+AGG 0.682818 2.2:+3336382 MS.gene051959:CDS
AAAGGAGCAATCATGCTCAG+TGG 0.685530 2.2:-3334263 None:intergenic
GTCAGTGATTGTACGTGATG+AGG 0.686537 2.2:+3335970 MS.gene051959:CDS
TTTCCTGCACTATATCAGCA+AGG 0.687834 2.2:+3339490 MS.gene051959:CDS
CACAGAGTATGTCTATGGGG+TGG 0.689000 2.2:+3334748 MS.gene051959:CDS
ACATGTATGATGAAGAAACC+GGG 0.695846 2.2:+3335131 MS.gene051959:CDS
GAACACAGAGTATGTCTATG+GGG 0.698396 2.2:+3334745 MS.gene051959:CDS
ATACAACACCTCTTTGTGTG+GGG 0.702634 2.2:+3339739 MS.gene051959:CDS
AGATCAACACATGTGGACGA+GGG 0.705427 2.2:+3340005 MS.gene051959:CDS
GATGATGCAGGTGAACATTG+TGG 0.714432 2.2:-3339668 None:intergenic
CTAAGTATGAGACCCCAAAG+TGG 0.739086 2.2:+3334930 MS.gene051959:CDS
CATTGGTGTTGGAATCAGCG+GGG 0.762337 2.2:+3338054 MS.gene051959:CDS
AAGCACTGGAGGATTCACGT+AGG 0.764698 2.2:+3334318 MS.gene051959:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTAAAATATTTTACTA+TGG + chr2.2:3338500-3338519 MS.gene051959:intron 10.0%
!! TAGTATTGTTTGTATTAAAT+TGG - chr2.2:3338593-3338612 None:intergenic 15.0%
!! TATTTAGTTAAAATCTATGT+TGG + chr2.2:3338807-3338826 MS.gene051959:intron 15.0%
!!! AAAATAAAGATTTCTTTTCA+TGG - chr2.2:3334100-3334119 None:intergenic 15.0%
!!! AGATTTTATATAGTATAAGT+AGG + chr2.2:3337689-3337708 MS.gene051959:intron 15.0%
!! AAACATAATAGCATTGTATT+TGG - chr2.2:3334147-3334166 None:intergenic 20.0%
!! ACACAAAAATAAACAAACAT+CGG - chr2.2:3335881-3335900 None:intergenic 20.0%
!! AGTAAATACTAAATTTAGAC+TGG - chr2.2:3338545-3338564 None:intergenic 20.0%
!! ATATCATTTATTAGTTCAGT+AGG + chr2.2:3334893-3334912 MS.gene051959:CDS 20.0%
!! CATAAAAAATCAGTTTAGAT+GGG - chr2.2:3339185-3339204 None:intergenic 20.0%
!! TAATAAATGATATCGCTATA+AGG - chr2.2:3334886-3334905 None:intergenic 20.0%
!! TTCTACAAAAATATAGCATT+TGG + chr2.2:3339225-3339244 MS.gene051959:CDS 20.0%
!! TTTGTACGTGAAAAAATTAT+AGG - chr2.2:3336648-3336667 None:intergenic 20.0%
!!! CTGATCAATGTTTTAAATTT+AGG + chr2.2:3338695-3338714 MS.gene051959:intron 20.0%
!!! GTTTGTTTATTTTTGTGTTT+CGG + chr2.2:3335883-3335902 MS.gene051959:intron 20.0%
!!! TACAAATTTTTATTCTTCTC+AGG + chr2.2:3336662-3336681 MS.gene051959:intron 20.0%
! AAAAATTTACTATTTCGCCA+TGG + chr2.2:3337014-3337033 MS.gene051959:intron 25.0%
! AAAATTATAACTGCAAATGG+TGG + chr2.2:3338127-3338146 MS.gene051959:intron 25.0%
! ACTGTACAACAAGAAAATAA+TGG - chr2.2:3336306-3336325 None:intergenic 25.0%
! AGGTTTATGAAATCAAAACT+TGG - chr2.2:3338219-3338238 None:intergenic 25.0%
! CACAAAATTATAACTGCAAA+TGG + chr2.2:3338124-3338143 MS.gene051959:intron 25.0%
! CATCTATATATCTCATATGT+AGG - chr2.2:3337477-3337496 None:intergenic 25.0%
! GCATAAAAAATCAGTTTAGA+TGG - chr2.2:3339186-3339205 None:intergenic 25.0%
! TAAACAAACATCGGATATTA+CGG - chr2.2:3335872-3335891 None:intergenic 25.0%
! TAATAAGAACATCACCAAAA+AGG - chr2.2:3338328-3338347 None:intergenic 25.0%
! TCAAATTTGAATGAAGAGTT+GGG + chr2.2:3335175-3335194 MS.gene051959:CDS 25.0%
! TGTAGAAGAAATAACATATC+TGG - chr2.2:3339212-3339231 None:intergenic 25.0%
! TGTTATTGAAATACTTCTGT+AGG + chr2.2:3337665-3337684 MS.gene051959:intron 25.0%
! TTCTGTTTATTGAACATATG+AGG + chr2.2:3336058-3336077 MS.gene051959:intron 25.0%
! TTTGACTGGTATAGAATATT+GGG + chr2.2:3339529-3339548 MS.gene051959:CDS 25.0%
! TTTGATAGACTATCTAAGAA+TGG + chr2.2:3336332-3336351 MS.gene051959:CDS 25.0%
!! AACATTATTCTTTTCTGCAA+AGG + chr2.2:3335998-3336017 MS.gene051959:CDS 25.0%
!! CAGTCAAAGAACAAATTTTT+GGG - chr2.2:3339517-3339536 None:intergenic 25.0%
!! GATATCAAACACCAATTTTT+GGG + chr2.2:3337199-3337218 MS.gene051959:CDS 25.0%
!! TACCTGTTTCTCTTATTATA+TGG + chr2.2:3339778-3339797 MS.gene051959:CDS 25.0%
!! TGATATCAAACACCAATTTT+TGG + chr2.2:3337198-3337217 MS.gene051959:CDS 25.0%
!! TGCTAATATATACTTCCTTT+TGG + chr2.2:3334202-3334221 MS.gene051959:CDS 25.0%
!! TTCATATTTTCATCCATGTT+TGG + chr2.2:3339433-3339452 MS.gene051959:intron 25.0%
!!! AAATTGATTGACTTGTTGAT+TGG + chr2.2:3338752-3338771 MS.gene051959:intron 25.0%
!!! AACAATTAAGAAGTGTTTAC+AGG - chr2.2:3338833-3338852 None:intergenic 25.0%
!!! AAGTCATTTTGTTGTTTTTC+CGG + chr2.2:3335551-3335570 MS.gene051959:CDS 25.0%
!!! TAAGAATGGAAAGAAGTATT+TGG + chr2.2:3336346-3336365 MS.gene051959:CDS 25.0%
!!! TGCTATTATGTTTTTTCCTA+AGG + chr2.2:3334154-3334173 MS.gene051959:CDS 25.0%
AAAAGAAAAAAGATCCTACC+AGG - chr2.2:3337282-3337301 None:intergenic 30.0%
AAAAGCTCCATCATTATCAA+GGG - chr2.2:3334591-3334610 None:intergenic 30.0%
AAAGAAAAAAGATCCTACCA+GGG - chr2.2:3337281-3337300 None:intergenic 30.0%
AAAGTGTAAAGATTGGGATT+TGG - chr2.2:3334647-3334666 None:intergenic 30.0%
AACAAAATGACTTCAGCATT+GGG - chr2.2:3335544-3335563 None:intergenic 30.0%
AACGTAGAACAATCAAAGAA+GGG - chr2.2:3338474-3338493 None:intergenic 30.0%
AAGCAGAATAGAGAAAAAGA+TGG + chr2.2:3334832-3334851 MS.gene051959:CDS 30.0%
AAGTGTAAAGATTGGGATTT+GGG - chr2.2:3334646-3334665 None:intergenic 30.0%
AATCACCATGTCATATTTCT+TGG + chr2.2:3335846-3335865 MS.gene051959:intron 30.0%
AATTGAAACATAGAGAGAGA+TGG - chr2.2:3335065-3335084 None:intergenic 30.0%
AGAAACCAGAAAGATACAAA+GGG - chr2.2:3337305-3337324 None:intergenic 30.0%
AGAAATCAAGTACTACAAGA+AGG + chr2.2:3339975-3339994 MS.gene051959:CDS 30.0%
AGAATTGCACAAATGGTAAT+TGG + chr2.2:3339037-3339056 MS.gene051959:intron 30.0%
AGTATTTCAATAACAGTGCA+TGG - chr2.2:3337660-3337679 None:intergenic 30.0%
ATACTGATATTCAATCTGGT+CGG - chr2.2:3334969-3334988 None:intergenic 30.0%
ATCAAAACCAAATCCCTTTA+TGG - chr2.2:3335485-3335504 None:intergenic 30.0%
ATCACTGCTCTTATTCTTTA+TGG + chr2.2:3335028-3335047 MS.gene051959:CDS 30.0%
ATCTATCATGTTTACATGTG+TGG + chr2.2:3338277-3338296 MS.gene051959:intron 30.0%
ATGAAAATATGAAACCCACA+AGG - chr2.2:3339426-3339445 None:intergenic 30.0%
ATGTTACATGCTTTCCAAAT+AGG - chr2.2:3338892-3338911 None:intergenic 30.0%
ATTGAAACATAGAGAGAGAT+GGG - chr2.2:3335064-3335083 None:intergenic 30.0%
CAATATTTGTGTAAGTAGCA+TGG - chr2.2:3337555-3337574 None:intergenic 30.0%
CCTCAAAATAGAATATTGTG+AGG - chr2.2:3339251-3339270 None:intergenic 30.0%
CTTTGACTGGTATAGAATAT+TGG + chr2.2:3339528-3339547 MS.gene051959:CDS 30.0%
GATCAATTAAGACCTTCTAT+CGG + chr2.2:3336086-3336105 MS.gene051959:intron 30.0%
GATCATACTGATATTCAATC+TGG - chr2.2:3334973-3334992 None:intergenic 30.0%
GATGTTAGATGGGAAAAATT+AGG + chr2.2:3337615-3337634 MS.gene051959:intron 30.0%
GATTAACCTTAACATCTTGA+AGG - chr2.2:3334346-3334365 None:intergenic 30.0%
GCATGTAACAGTTACTAAAA+TGG - chr2.2:3339887-3339906 None:intergenic 30.0%
GGAAGTTATATAACTCAATC+TGG + chr2.2:3338916-3338935 MS.gene051959:intron 30.0%
GGATATAGTGAAAGTAGAAA+AGG + chr2.2:3334436-3334455 MS.gene051959:CDS 30.0%
GTACAGTGATAGTACTTATA+CGG - chr2.2:3337879-3337898 None:intergenic 30.0%
GTATAAAATACTGAATCTGC+TGG + chr2.2:3335922-3335941 MS.gene051959:CDS 30.0%
GTCAAATTTGAATGAAGAGT+TGG + chr2.2:3335174-3335193 MS.gene051959:CDS 30.0%
GTCAATAATTAACGCAAAAG+CGG - chr2.2:3337149-3337168 None:intergenic 30.0%
TAAAAGCTCCATCATTATCA+AGG - chr2.2:3334592-3334611 None:intergenic 30.0%
TAACAGCTAATCCCAAAAAT+TGG - chr2.2:3337213-3337232 None:intergenic 30.0%
TAGAAACCAGAAAGATACAA+AGG - chr2.2:3337306-3337325 None:intergenic 30.0%
TATAGAATATTGGGATGGAT+GGG + chr2.2:3339538-3339557 MS.gene051959:CDS 30.0%
TCAACAAAACGTTCATATCA+TGG - chr2.2:3338636-3338655 None:intergenic 30.0%
TCAGTTTAGATGGGAAATAT+TGG - chr2.2:3339176-3339195 None:intergenic 30.0%
TCTAGGCATTTGAATGAATA+TGG + chr2.2:3336377-3336396 MS.gene051959:CDS 30.0%
TCTTGTAGTACTTGATTTCT+TGG - chr2.2:3339975-3339994 None:intergenic 30.0%
TGCCATATAATAAGAGAAAC+AGG - chr2.2:3339783-3339802 None:intergenic 30.0%
TTACAAGAGAATTGCACAAA+TGG + chr2.2:3339030-3339049 MS.gene051959:CDS 30.0%
TTTCTTCATCATACATGTGA+AGG - chr2.2:3335129-3335148 None:intergenic 30.0%
! AAACACGTGTTTTTCCTATT+TGG + chr2.2:3338875-3338894 MS.gene051959:intron 30.0%
! AAAGAGAGTTGATTCTTGTT+GGG + chr2.2:3336546-3336565 MS.gene051959:CDS 30.0%
! ACTTTTCCATTGCTCAATTT+CGG + chr2.2:3338969-3338988 MS.gene051959:CDS 30.0%
! ATCTTCATTCCTCAATCTTT+TGG + chr2.2:3337936-3337955 MS.gene051959:intron 30.0%
! CAACACTAAAAGTATGAAGT+CGG + chr2.2:3337899-3337918 MS.gene051959:intron 30.0%
! CATGCTACTTACACAAATAT+TGG + chr2.2:3337553-3337572 MS.gene051959:intron 30.0%
! CCAAAAATTTGTTCTTTGAC+TGG + chr2.2:3339515-3339534 MS.gene051959:CDS 30.0%
! CCAACAAAAGTGTAAAGATT+GGG - chr2.2:3334653-3334672 None:intergenic 30.0%
! CCAATCTTTACACTTTTGTT+GGG + chr2.2:3334651-3334670 MS.gene051959:CDS 30.0%
! CCAGTCAAAGAACAAATTTT+TGG - chr2.2:3339518-3339537 None:intergenic 30.0%
! CCTCACAATATTCTATTTTG+AGG + chr2.2:3339248-3339267 MS.gene051959:CDS 30.0%
! CTATTCTGCTTCTTTTTGAA+GGG - chr2.2:3334823-3334842 None:intergenic 30.0%
! GATTTCTTTTCATGGATTTG+AGG - chr2.2:3334092-3334111 None:intergenic 30.0%
! GCTTTTGCGTTAATTATTGA+CGG + chr2.2:3337148-3337167 MS.gene051959:CDS 30.0%
! GTCAATCGGTTTATAATGAT+TGG + chr2.2:3339289-3339308 MS.gene051959:CDS 30.0%
! TCTATTCTGCTTCTTTTTGA+AGG - chr2.2:3334824-3334843 None:intergenic 30.0%
!! ATGATATGAACGTTTTGTTG+AGG + chr2.2:3338635-3338654 MS.gene051959:intron 30.0%
!! GGTTAAAGTTCCAGTTTTAT+CGG - chr2.2:3335221-3335240 None:intergenic 30.0%
!! TATTCTGCTTCTTTTTGAAG+GGG - chr2.2:3334822-3334841 None:intergenic 30.0%
!! TGATAATGATGGAGCTTTTA+AGG + chr2.2:3334592-3334611 MS.gene051959:CDS 30.0%
AAAACTCCAAGTGAAATGAC+AGG - chr2.2:3339351-3339370 None:intergenic 35.0%
AACTTTAACCTGCAATCAGA+TGG + chr2.2:3335231-3335250 MS.gene051959:CDS 35.0%
AAGATGTTAAGGTTAATCGC+CGG + chr2.2:3334348-3334367 MS.gene051959:CDS 35.0%
AATTTCCCCATGCAAAAGAA+GGG + chr2.2:3335370-3335389 MS.gene051959:CDS 35.0%
ACAATTGATGAATCTGGAGA+AGG + chr2.2:3337114-3337133 MS.gene051959:CDS 35.0%
ACATGTATGATGAAGAAACC+GGG + chr2.2:3335131-3335150 MS.gene051959:CDS 35.0%
ACTGGTATAGAATATTGGGA+TGG + chr2.2:3339533-3339552 MS.gene051959:CDS 35.0%
AGTATTCCCGAAGAAAAAAC+CGG - chr2.2:3335806-3335825 None:intergenic 35.0%
AGTATTTGGAGACTACTTCT+AGG + chr2.2:3336360-3336379 MS.gene051959:CDS 35.0%
ATAGAATATTGGGATGGATG+GGG + chr2.2:3339539-3339558 MS.gene051959:CDS 35.0%
ATCACCAAACTCATTTGAAG+AGG - chr2.2:3336852-3336871 None:intergenic 35.0%
ATGATTCAAGAAGCTGACAT+TGG + chr2.2:3338037-3338056 MS.gene051959:CDS 35.0%
ATGGAAACTGCAATCAACAT+TGG + chr2.2:3336750-3336769 MS.gene051959:CDS 35.0%
ATGGATGTCAAAGTTTAGAG+AGG - chr2.2:3336287-3336306 None:intergenic 35.0%
ATGGTTGCTGTCCAATAAAT+AGG - chr2.2:3339868-3339887 None:intergenic 35.0%
ATTCATCAATTGTGAGGCAT+TGG - chr2.2:3337107-3337126 None:intergenic 35.0%
CAAAAACCGAAATTGAGCAA+TGG - chr2.2:3338978-3338997 None:intergenic 35.0%
CAACAAAATGACTTCAGCAT+TGG - chr2.2:3335545-3335564 None:intergenic 35.0%
CAAGCACTTCAACCAATATT+TGG - chr2.2:3339837-3339856 None:intergenic 35.0%
CACATGTATGATGAAGAAAC+CGG + chr2.2:3335130-3335149 MS.gene051959:CDS 35.0%
CAGAATCAGTGATCAATGAT+GGG + chr2.2:3336958-3336977 MS.gene051959:CDS 35.0%
CAGTATGATCCTAAGAAACT+TGG + chr2.2:3334983-3335002 MS.gene051959:CDS 35.0%
CTCTCTCTATGTTTCAATTG+AGG + chr2.2:3335066-3335085 MS.gene051959:CDS 35.0%
CTTGAAGGTGAAAAGATCAT+TGG + chr2.2:3334553-3334572 MS.gene051959:CDS 35.0%
GAACGTAGAACAATCAAAGA+AGG - chr2.2:3338475-3338494 None:intergenic 35.0%
GCAAGTTTATCAATGCATTG+AGG - chr2.2:3336690-3336709 None:intergenic 35.0%
GCATTTGAATGAATATGGAG+AGG + chr2.2:3336382-3336401 MS.gene051959:CDS 35.0%
GCTCTATGTTGATGTTAGAT+GGG + chr2.2:3337605-3337624 MS.gene051959:intron 35.0%
GTAACAAGGTTAGTGAAAGA+AGG + chr2.2:3337965-3337984 MS.gene051959:CDS 35.0%
GTATAGAATATTGGGATGGA+TGG + chr2.2:3339537-3339556 MS.gene051959:CDS 35.0%
GTGGAAACCATGAATTTAGA+TGG + chr2.2:3334521-3334540 MS.gene051959:CDS 35.0%
TAAAATCCTCTTCAAGCTTG+TGG + chr2.2:3336124-3336143 MS.gene051959:intron 35.0%
TAATTTCCCCATGCAAAAGA+AGG + chr2.2:3335369-3335388 MS.gene051959:CDS 35.0%
TACTGATATTCAATCTGGTC+GGG - chr2.2:3334968-3334987 None:intergenic 35.0%
TAGACAGAAGTCACATTACT+AGG - chr2.2:3336038-3336057 None:intergenic 35.0%
TAGATGGGAAAAATTAGGTG+TGG + chr2.2:3337620-3337639 MS.gene051959:intron 35.0%
TAGGTTCCTTCAAGATGTTA+AGG + chr2.2:3334337-3334356 MS.gene051959:CDS 35.0%
TCAGAATCAGTGATCAATGA+TGG + chr2.2:3336957-3336976 MS.gene051959:CDS 35.0%
TCCATCATTATCAAGGGAAA+AGG - chr2.2:3334585-3334604 None:intergenic 35.0%
TGAAATGCAGATAGTGTTGT+GGG - chr2.2:3336801-3336820 None:intergenic 35.0%
TGAAGTCTATTGTGCATTTC+CGG + chr2.2:3335784-3335803 MS.gene051959:intron 35.0%
TGGAAACTGCAATCAACATT+GGG + chr2.2:3336751-3336770 MS.gene051959:CDS 35.0%
TGGATAATGTGATGATCCAT+GGG - chr2.2:3339955-3339974 None:intergenic 35.0%
TGTAAAATGGCTCATTGTCA+AGG - chr2.2:3339716-3339735 None:intergenic 35.0%
TGTTTCAATTGAGGTTGTGA+AGG + chr2.2:3335075-3335094 MS.gene051959:CDS 35.0%
TTACTATGGAGAACCATATG+AGG + chr2.2:3338514-3338533 MS.gene051959:intron 35.0%
TTCTGCTCAATCTAAGTGAA+AGG - chr2.2:3336995-3337014 None:intergenic 35.0%
TTGAAATGCAGATAGTGTTG+TGG - chr2.2:3336802-3336821 None:intergenic 35.0%
TTGAATGAATATGGAGAGGT+GGG + chr2.2:3336386-3336405 MS.gene051959:CDS 35.0%
TTGATGTTGAAACCGATAGA+AGG - chr2.2:3336101-3336120 None:intergenic 35.0%
TTGGATAATGTGATGATCCA+TGG - chr2.2:3339956-3339975 None:intergenic 35.0%
TTTACACGTTTGGTTGTCTT+CGG + chr2.2:3333994-3334013 MS.gene051959:CDS 35.0%
TTTGAATGAATATGGAGAGG+TGG + chr2.2:3336385-3336404 MS.gene051959:CDS 35.0%
! AAGAGAGTTGATTCTTGTTG+GGG + chr2.2:3336547-3336566 MS.gene051959:CDS 35.0%
! ACAGTTGTTACTTCTAAGGA+TGG + chr2.2:3335442-3335461 MS.gene051959:CDS 35.0%
! ATTGATAAACTTGCTCAAGC+TGG + chr2.2:3336696-3336715 MS.gene051959:CDS 35.0%
! CAATCTGGCAAATTCTTTTC+AGG + chr2.2:3338931-3338950 MS.gene051959:intron 35.0%
! CATTGCTCAATTTCGGTTTT+TGG + chr2.2:3338976-3338995 MS.gene051959:CDS 35.0%
! CCCAACAAAAGTGTAAAGAT+TGG - chr2.2:3334654-3334673 None:intergenic 35.0%
! CCCAATCTTTACACTTTTGT+TGG + chr2.2:3334650-3334669 MS.gene051959:CDS 35.0%
! CGACTTCATACTTTTAGTGT+TGG - chr2.2:3337901-3337920 None:intergenic 35.0%
! CTAAGAAACTTGGATTTGCT+GGG + chr2.2:3334993-3335012 MS.gene051959:CDS 35.0%
! CTTTTCCCTTTGTATCTTTC+TGG + chr2.2:3337297-3337316 MS.gene051959:intron 35.0%
! GAAAGAGAGTTGATTCTTGT+TGG + chr2.2:3336545-3336564 MS.gene051959:CDS 35.0%
! GATTTCTTGTCAAGCCTTTT+TGG + chr2.2:3338311-3338330 MS.gene051959:intron 35.0%
! GGTGTTGTATCCATGTAAAA+TGG - chr2.2:3339729-3339748 None:intergenic 35.0%
! GTTTTCTTGAAATGCCTTGT+GGG + chr2.2:3339409-3339428 MS.gene051959:intron 35.0%
! TCTATTGTCTTCAAGTTACG+AGG + chr2.2:3334484-3334503 MS.gene051959:CDS 35.0%
! TGAGACAGTTGTTACTTCTA+AGG + chr2.2:3335438-3335457 MS.gene051959:CDS 35.0%
! TGATCTTTTCACCTTCAAGT+TGG - chr2.2:3334552-3334571 None:intergenic 35.0%
! TGGAAAGCATGTAACATGTA+TGG + chr2.2:3338895-3338914 MS.gene051959:intron 35.0%
! TGTTTTCTTGAAATGCCTTG+TGG + chr2.2:3339408-3339427 MS.gene051959:intron 35.0%
!! ATGAACAAGAGTACTCTGAT+TGG + chr2.2:3336444-3336463 MS.gene051959:CDS 35.0%
!! CTTTATGGAAACTAGCTTTC+CGG - chr2.2:3334370-3334389 None:intergenic 35.0%
!! TGACAATGAGCCATTTTACA+TGG + chr2.2:3339716-3339735 MS.gene051959:CDS 35.0%
!! TGAGAAGGTATCAGATAGTA+TGG + chr2.2:3336523-3336542 MS.gene051959:CDS 35.0%
!!! ACCTTTTCCCTTGATAATGA+TGG + chr2.2:3334581-3334600 MS.gene051959:CDS 35.0%
!!! ATTCTATTTTGAGGCCTTTG+CGG + chr2.2:3339257-3339276 MS.gene051959:CDS 35.0%
!!! TGCATTTCCGGTTTTTTCTT+CGG + chr2.2:3335796-3335815 MS.gene051959:intron 35.0%
AAACCAAATCCCTTTATGGC+AGG - chr2.2:3335481-3335500 None:intergenic 40.0%
AACGATATGTGGGCAAGATA+AGG - chr2.2:3339916-3339935 None:intergenic 40.0%
AAGCTGAATCACCTGATGAA+GGG + chr2.2:3335638-3335657 MS.gene051959:CDS 40.0%
AAGGTCTTGGTTAATGAACC+TGG - chr2.2:3335110-3335129 None:intergenic 40.0%
AATGTTCACCTGCATCATCT+GGG + chr2.2:3339672-3339691 MS.gene051959:CDS 40.0%
AATTTCTGCTTCTGGACAAG+TGG + chr2.2:3335738-3335757 MS.gene051959:CDS 40.0%
ACAGCCTCTTCAAATGAGTT+TGG + chr2.2:3336845-3336864 MS.gene051959:intron 40.0%
ACCAATTACCATTCATGAGC+CGG - chr2.2:3335513-3335532 None:intergenic 40.0%
ACCACTTTAGCAATAGGTGA+TGG + chr2.2:3337998-3338017 MS.gene051959:CDS 40.0%
ACCATAGGAAATTCCAGCAA+TGG - chr2.2:3335272-3335291 None:intergenic 40.0%
ACCATCACCTATTGCTAAAG+TGG - chr2.2:3338002-3338021 None:intergenic 40.0%
ACCTGTAAGCAAACTTCAGA+TGG - chr2.2:3339387-3339406 None:intergenic 40.0%
ACGTTGAAGATCAACACATG+TGG + chr2.2:3339998-3340017 MS.gene051959:CDS 40.0%
AGAAAGCTAAGACAGCTGTT+GGG + chr2.2:3336480-3336499 MS.gene051959:CDS 40.0%
AGAAGAAGCAAACATCAGGA+GGG + chr2.2:3340112-3340131 MS.gene051959:CDS 40.0%
AGGAACACAGAGTATGTCTA+TGG + chr2.2:3334743-3334762 MS.gene051959:CDS 40.0%
AGGTTAGTGAAAGAAGGAAC+TGG + chr2.2:3337971-3337990 MS.gene051959:CDS 40.0%
AGTATATGACCAGGATCAAG+AGG - chr2.2:3334704-3334723 None:intergenic 40.0%
ATACAACACCTCTTTGTGTG+GGG + chr2.2:3339739-3339758 MS.gene051959:CDS 40.0%
ATACTTCAGTGCCATAGCAA+TGG + chr2.2:3337715-3337734 MS.gene051959:intron 40.0%
ATCAAGCTTTCTGTAAGCCA+GGG - chr2.2:3336426-3336445 None:intergenic 40.0%
ATGCATTACTGTCCTTGAAC+AGG - chr2.2:3339123-3339142 None:intergenic 40.0%
CAAAAACGCCATTGCCTTTA+TGG - chr2.2:3334385-3334404 None:intergenic 40.0%
CAAAAAGTCCATCTGATTGC+AGG - chr2.2:3335242-3335261 None:intergenic 40.0%
CAAGTCGTGGCAGAAAATTA+TGG + chr2.2:3334409-3334428 MS.gene051959:CDS 40.0%
CAATATTTGGTACGCAGTCA+TGG - chr2.2:3339824-3339843 None:intergenic 40.0%
CATCATACATGTGAAGGTCT+TGG - chr2.2:3335123-3335142 None:intergenic 40.0%
CATGACTGCGTACCAAATAT+TGG + chr2.2:3339822-3339841 MS.gene051959:CDS 40.0%
CATGGATTCCATCTGATGTT+AGG + chr2.2:3337032-3337051 MS.gene051959:intron 40.0%
CCAGCAAATCCAAGTTTCTT+AGG - chr2.2:3334995-3335014 None:intergenic 40.0%
CCATGGGATTAAAACACCTT+TGG - chr2.2:3339939-3339958 None:intergenic 40.0%
CCTAAGAAACTTGGATTTGC+TGG + chr2.2:3334992-3335011 MS.gene051959:CDS 40.0%
CGTGGCAGAAAATTATGGTT+GGG + chr2.2:3334414-3334433 MS.gene051959:CDS 40.0%
CTAACATCAGATGGAATCCA+TGG - chr2.2:3337034-3337053 None:intergenic 40.0%
CTCCAGATTCATCAATTGTG+AGG - chr2.2:3337113-3337132 None:intergenic 40.0%
CTTGTAGCTGCTAGAGAATT+TGG + chr2.2:3335667-3335686 MS.gene051959:CDS 40.0%
GAAATGCAGATAGTGTTGTG+GGG - chr2.2:3336800-3336819 None:intergenic 40.0%
GAACACAGAGTATGTCTATG+GGG + chr2.2:3334745-3334764 MS.gene051959:CDS 40.0%
GAAGGTGAAAAGATCATTGG+AGG + chr2.2:3334556-3334575 MS.gene051959:CDS 40.0%
GAATAAGAGCAGTGATCAGA+TGG - chr2.2:3335024-3335043 None:intergenic 40.0%
GAGGTTGAGTTATCCAAACA+TGG - chr2.2:3339449-3339468 None:intergenic 40.0%
GATACAACACCTCTTTGTGT+GGG + chr2.2:3339738-3339757 MS.gene051959:CDS 40.0%
GATGATGACAAGGAAGAAGA+TGG - chr2.2:3339587-3339606 None:intergenic 40.0%
GCAAGACAGGAAACAAAGAT+TGG + chr2.2:3340039-3340058 MS.gene051959:CDS 40.0%
GCATGTAGTTTACTTCGACA+GGG + chr2.2:3336903-3336922 MS.gene051959:CDS 40.0%
GCTGTTTGAACAGTTTCGAA+GGG + chr2.2:3334178-3334197 MS.gene051959:CDS 40.0%
GGAACACAGAGTATGTCTAT+GGG + chr2.2:3334744-3334763 MS.gene051959:CDS 40.0%
GGCTCTATGTTGATGTTAGA+TGG + chr2.2:3337604-3337623 MS.gene051959:intron 40.0%
GGTCTCTCCATCTAAATTCA+TGG - chr2.2:3334531-3334550 None:intergenic 40.0%
GGTTAGTGAAAGAAGGAACT+GGG + chr2.2:3337972-3337991 MS.gene051959:CDS 40.0%
GTAGGCTTGATCATTACATG+TGG + chr2.2:3336602-3336621 MS.gene051959:intron 40.0%
GTGGCAGAAAATTATGGTTG+GGG + chr2.2:3334415-3334434 MS.gene051959:CDS 40.0%
TAAGAGAAACAGGTACCAAC+TGG - chr2.2:3339773-3339792 None:intergenic 40.0%
TACCTGATGCCAAAAGATTG+AGG - chr2.2:3337948-3337967 None:intergenic 40.0%
TACGCAGTCATGGAATAATG+TGG - chr2.2:3339814-3339833 None:intergenic 40.0%
TACGGCCAAGAAATATGACA+TGG - chr2.2:3335854-3335873 None:intergenic 40.0%
TACTTATACGGACTCCACTT+TGG - chr2.2:3337867-3337886 None:intergenic 40.0%
TCATATCATGGACAGCAGAT+AGG - chr2.2:3338624-3338643 None:intergenic 40.0%
TCCATTGCTGGAATTTCCTA+TGG + chr2.2:3335268-3335287 MS.gene051959:CDS 40.0%
TCGTGGCAGAAAATTATGGT+TGG + chr2.2:3334413-3334432 MS.gene051959:CDS 40.0%
TGCATGTAGTTTACTTCGAC+AGG + chr2.2:3336902-3336921 MS.gene051959:CDS 40.0%
TGCCTCACAATTGATGAATC+TGG + chr2.2:3337108-3337127 MS.gene051959:CDS 40.0%
TGCTGTCCAATAAATAGGAG+CGG - chr2.2:3339863-3339882 None:intergenic 40.0%
TGGAGCAATCTTTACACGTT+TGG + chr2.2:3333984-3334003 MS.gene051959:CDS 40.0%
TTTCCTGCACTATATCAGCA+AGG + chr2.2:3339490-3339509 MS.gene051959:CDS 40.0%
TTTCTTCGGGAATACTTGCT+AGG + chr2.2:3335810-3335829 MS.gene051959:intron 40.0%
TTTGAATGAAGAGTTGGGTC+AGG + chr2.2:3335180-3335199 MS.gene051959:CDS 40.0%
! ACTCTCGAGTTTGATAGCTT+AGG - chr2.2:3337384-3337403 None:intergenic 40.0%
! AGTGATCAATGATGGGAAAG+AGG + chr2.2:3336965-3336984 MS.gene051959:CDS 40.0%
! CATAAAGGCAATGGCGTTTT+TGG + chr2.2:3334383-3334402 MS.gene051959:CDS 40.0%
! CATGGAAGATGATGATGACA+AGG - chr2.2:3339597-3339616 None:intergenic 40.0%
! CGGAAAGCTAGTTTCCATAA+AGG + chr2.2:3334368-3334387 MS.gene051959:CDS 40.0%
! CTTTACCCTTCTTTTGCATG+GGG - chr2.2:3335378-3335397 None:intergenic 40.0%
! GCTAGTTTCCATAAAGGCAA+TGG + chr2.2:3334374-3334393 MS.gene051959:CDS 40.0%
! GCTATCAAACTCGAGAGTTT+TGG + chr2.2:3337386-3337405 MS.gene051959:intron 40.0%
! GCTTTACCCTTCTTTTGCAT+GGG - chr2.2:3335379-3335398 None:intergenic 40.0%
! GTGAAATTGGTGATAACGAG+AGG - chr2.2:3334235-3334254 None:intergenic 40.0%
! TCTTTTGGCATCAGGTAACA+AGG + chr2.2:3337951-3337970 MS.gene051959:intron 40.0%
! TGTCTTCAAGTTACGAGGAT+GGG + chr2.2:3334489-3334508 MS.gene051959:CDS 40.0%
! TGTTACTTCTAAGGATGGTG+AGG + chr2.2:3335447-3335466 MS.gene051959:CDS 40.0%
! TTCCTCAATCTTTTGGCATC+AGG + chr2.2:3337943-3337962 MS.gene051959:intron 40.0%
! TTCTTCGGGAATACTTGCTA+GGG + chr2.2:3335811-3335830 MS.gene051959:intron 40.0%
! TTGTCTTCAAGTTACGAGGA+TGG + chr2.2:3334488-3334507 MS.gene051959:CDS 40.0%
!! AAATTCTTTTCAGGCGGTGA+TGG + chr2.2:3338940-3338959 MS.gene051959:intron 40.0%
!! AACACCTTTGGAACGATATG+TGG - chr2.2:3339927-3339946 None:intergenic 40.0%
!! AACTGCAAATGGTGGATTAC+TGG + chr2.2:3338135-3338154 MS.gene051959:intron 40.0%
!! AAGTTCCAGTTTTATCGGAG+AGG - chr2.2:3335216-3335235 None:intergenic 40.0%
!! ACACCTTTGGAACGATATGT+GGG - chr2.2:3339926-3339945 None:intergenic 40.0%
!! AGTGGACTGAAAGGTGAAAT+TGG - chr2.2:3334248-3334267 None:intergenic 40.0%
!! CTCAATTTCGGTTTTTGGAG+CGG + chr2.2:3338981-3339000 MS.gene051959:CDS 40.0%
!! GGAGCTTTTAAGGATTTCTC+TGG + chr2.2:3334602-3334621 MS.gene051959:CDS 40.0%
!! TCTGGCAAATTCTTTTCAGG+CGG + chr2.2:3338934-3338953 MS.gene051959:intron 40.0%
!! TCTTTTCATGGATTTGAGGC+TGG - chr2.2:3334088-3334107 None:intergenic 40.0%
!! TGAGGTTGTGAAGGTATTAC+AGG + chr2.2:3335084-3335103 MS.gene051959:CDS 40.0%
!! TGTTCCTGAGCTTTGAATCT+CGG - chr2.2:3334730-3334749 None:intergenic 40.0%
!! TTTTGTTGTGGGGCTTAGTA+TGG + chr2.2:3334289-3334308 MS.gene051959:CDS 40.0%
!!! ATGTTGCTTTTGATTGCCTG+AGG - chr2.2:3337070-3337089 None:intergenic 40.0%
!!! CCAAAGGTGTTTTAATCCCA+TGG + chr2.2:3339936-3339955 MS.gene051959:CDS 40.0%
!!! GATTTGGTTTTGATGACAGC+CGG + chr2.2:3335491-3335510 MS.gene051959:CDS 40.0%
!!! GCATTTCCGGTTTTTTCTTC+GGG + chr2.2:3335797-3335816 MS.gene051959:intron 40.0%
!!! TGTTGCTTTTGATTGCCTGA+GGG - chr2.2:3337069-3337088 None:intergenic 40.0%
!!! TTCTATTTTGAGGCCTTTGC+GGG + chr2.2:3339258-3339277 MS.gene051959:CDS 40.0%
!!! TTTTTGAAGTGCTCCATTGC+TGG + chr2.2:3335256-3335275 MS.gene051959:CDS 40.0%
AAAGGAGCAATCATGCTCAG+TGG - chr2.2:3334266-3334285 None:intergenic 45.0%
AACTGTTCAAACAGCGCCTT+AGG - chr2.2:3334173-3334192 None:intergenic 45.0%
AAGATCAACACATGTGGACG+AGG + chr2.2:3340004-3340023 MS.gene051959:CDS 45.0%
ACAAGAAAAGCCCCTTCATC+AGG - chr2.2:3335652-3335671 None:intergenic 45.0%
ACCATCCTCTCCGATAAAAC+TGG + chr2.2:3335208-3335227 MS.gene051959:CDS 45.0%
ACGCTCACGACTTCATGTAA+TGG - chr2.2:3338663-3338682 None:intergenic 45.0%
ACGTGTAAAGATTGCTCCAC+CGG - chr2.2:3333983-3334002 None:intergenic 45.0%
ACTGAGCATGATTGCTCCTT+TGG + chr2.2:3334265-3334284 MS.gene051959:CDS 45.0%
AGATCAACACATGTGGACGA+GGG + chr2.2:3340005-3340024 MS.gene051959:CDS 45.0%
AGATGGAGAGACCAACTTGA+AGG + chr2.2:3334538-3334557 MS.gene051959:CDS 45.0%
AGCTGAATCACCTGATGAAG+GGG + chr2.2:3335639-3335658 MS.gene051959:CDS 45.0%
AGTGATTGTACGTGATGAGG+AGG + chr2.2:3335973-3335992 MS.gene051959:CDS 45.0%
ATACACGGTTCTCGAGTAAC+CGG - chr2.2:3334060-3334079 None:intergenic 45.0%
ATATTGGGATGGATGGGGAA+TGG + chr2.2:3339544-3339563 MS.gene051959:CDS 45.0%
ATTAACGCAAAAGCGGCATG+TGG - chr2.2:3337142-3337161 None:intergenic 45.0%
CAAACTCCACAAGCTTGAAG+AGG - chr2.2:3336133-3336152 None:intergenic 45.0%
CAAGAAGCTGACATTGGTGT+TGG + chr2.2:3338043-3338062 MS.gene051959:CDS 45.0%
CAATGTTCACCTGCATCATC+TGG + chr2.2:3339671-3339690 MS.gene051959:CDS 45.0%
CACACACAAGCTGTCATAGA+TGG + chr2.2:3336249-3336268 MS.gene051959:intron 45.0%
CACACATCCACACACATCAA+CGG - chr2.2:3337770-3337789 None:intergenic 45.0%
CAGAAAGCTAAGACAGCTGT+TGG + chr2.2:3336479-3336498 MS.gene051959:CDS 45.0%
CAGAAGAAGCAAACATCAGG+AGG + chr2.2:3340111-3340130 MS.gene051959:CDS 45.0%
CAGGTTTATCCTCTTGATCC+TGG + chr2.2:3334692-3334711 MS.gene051959:CDS 45.0%
CATCAAGCTTTCTGTAAGCC+AGG - chr2.2:3336427-3336446 None:intergenic 45.0%
CCCCAAAGTGGTGGTATTTA+CGG + chr2.2:3334942-3334961 MS.gene051959:CDS 45.0%
CCGTAAATACCACCACTTTG+GGG - chr2.2:3334945-3334964 None:intergenic 45.0%
CGCGAAAGAATTTCTGCTTC+TGG + chr2.2:3335730-3335749 MS.gene051959:CDS 45.0%
CGCTGTTTGAACAGTTTCGA+AGG + chr2.2:3334177-3334196 MS.gene051959:CDS 45.0%
CTAAGGATGGTGAGGATCAA+AGG + chr2.2:3335455-3335474 MS.gene051959:CDS 45.0%
CTAAGTATGAGACCCCAAAG+TGG + chr2.2:3334930-3334949 MS.gene051959:CDS 45.0%
CTGCAGAAGAAGCAAACATC+AGG + chr2.2:3340108-3340127 MS.gene051959:CDS 45.0%
CTTCTGGACAAGTGGTTGAA+AGG + chr2.2:3335746-3335765 MS.gene051959:CDS 45.0%
GAACTTTGAGTACGAACGTC+AGG + chr2.2:3334673-3334692 MS.gene051959:CDS 45.0%
GAAGAAGCAAACATCAGGAG+GGG + chr2.2:3340113-3340132 MS.gene051959:CDS 45.0%
GAAGCTGAATCACCTGATGA+AGG + chr2.2:3335637-3335656 MS.gene051959:CDS 45.0%
GACAATAGAAGCAAGTCAGC+TGG - chr2.2:3334473-3334492 None:intergenic 45.0%
GACCAAGCATTTCGTCTGAA+TGG + chr2.2:3339616-3339635 MS.gene051959:CDS 45.0%
GATCAAAGGCCTGCCATAAA+GGG + chr2.2:3335469-3335488 MS.gene051959:CDS 45.0%
GATGATGCAGGTGAACATTG+TGG - chr2.2:3339671-3339690 None:intergenic 45.0%
GATTGGATTCACAGCAAGAG+TGG + chr2.2:3340056-3340075 MS.gene051959:CDS 45.0%
GCATAGAACTAGCATGTCAG+AGG - chr2.2:3339468-3339487 None:intergenic 45.0%
GCCGTAAATACCACCACTTT+GGG - chr2.2:3334946-3334965 None:intergenic 45.0%
GCGTACGACAACACTTGATT+GGG - chr2.2:3335713-3335732 None:intergenic 45.0%
GCTGTCCAATAAATAGGAGC+GGG - chr2.2:3339862-3339881 None:intergenic 45.0%
GGATACAACACCTCTTTGTG+TGG + chr2.2:3339737-3339756 MS.gene051959:CDS 45.0%
GGGAAGACCACTTTAGCAAT+AGG + chr2.2:3337992-3338011 MS.gene051959:CDS 45.0%
GGGGTATACCTAACATCAGA+TGG - chr2.2:3337043-3337062 None:intergenic 45.0%
GTCAGTGATTGTACGTGATG+AGG + chr2.2:3335970-3335989 MS.gene051959:CDS 45.0%
GTGATTGTACGTGATGAGGA+GGG + chr2.2:3335974-3335993 MS.gene051959:CDS 45.0%
GTTAATGCAAGCCTCTTCTC+TGG - chr2.2:3336218-3336237 None:intergenic 45.0%
GTTGCTCTCCTCATTAAGCT+CGG - chr2.2:3335605-3335624 None:intergenic 45.0%
TAGACTGGATGCTCCTCATA+TGG - chr2.2:3338530-3338549 None:intergenic 45.0%
TAGAGAGGCAATGCTTGAGA+AGG + chr2.2:3336508-3336527 MS.gene051959:CDS 45.0%
TATGGCAAACGGCTAGTATC+CGG - chr2.2:3335573-3335592 None:intergenic 45.0%
TCAAGATCTGGGTCTTGACA+GGG + chr2.2:3336721-3336740 MS.gene051959:CDS 45.0%
TCAGACGAAATGCTTGGTCA+TGG - chr2.2:3339615-3339634 None:intergenic 45.0%
TCTTGTAACACCAGTGTCCA+TGG - chr2.2:3339018-3339037 None:intergenic 45.0%
TGATGTGTGTGGATGTGTGT+GGG + chr2.2:3337771-3337790 MS.gene051959:intron 45.0%
TGCAGCAAGTTCAACTTCAC+TGG - chr2.2:3335302-3335321 None:intergenic 45.0%
TGCCATTAATGGCACCAAAG+TGG + chr2.2:3337850-3337869 MS.gene051959:intron 45.0%
TGGAAGACAAGCTGCAGAAA+GGG + chr2.2:3336579-3336598 MS.gene051959:CDS 45.0%
TTAACGCAAAAGCGGCATGT+GGG - chr2.2:3337141-3337160 None:intergenic 45.0%
TTCACTGGAACGTACACCAT+AGG - chr2.2:3335287-3335306 None:intergenic 45.0%
TTGATGTGTGTGGATGTGTG+TGG + chr2.2:3337770-3337789 MS.gene051959:intron 45.0%
TTGCCCACATATCGTTCCAA+AGG + chr2.2:3339920-3339939 MS.gene051959:CDS 45.0%
TTGCTCCCGCTCCTATTTAT+TGG + chr2.2:3339854-3339873 MS.gene051959:CDS 45.0%
TTGCTCTCCTCATTAAGCTC+GGG - chr2.2:3335604-3335623 None:intergenic 45.0%
! AAAAGAAGGGTAAAGCGCCA+TGG + chr2.2:3335383-3335402 MS.gene051959:CDS 45.0%
! AAAGAAGGGTAAAGCGCCAT+GGG + chr2.2:3335384-3335403 MS.gene051959:CDS 45.0%
! AAAGCGCCATGGGAAAATGT+TGG + chr2.2:3335394-3335413 MS.gene051959:CDS 45.0%
! CCTTTTGCTTGGGAGATACA+CGG - chr2.2:3337258-3337277 None:intergenic 45.0%
! CGCTTTACCCTTCTTTTGCA+TGG - chr2.2:3335380-3335399 None:intergenic 45.0%
! GCCATCTGAAGTTTGCTTAC+AGG + chr2.2:3339383-3339402 MS.gene051959:CDS 45.0%
! GCTCTTCCAACATTTTCCCA+TGG - chr2.2:3335403-3335422 None:intergenic 45.0%
! GGTGATGGTGCAAATGATGT+TGG + chr2.2:3338013-3338032 MS.gene051959:CDS 45.0%
! TAGTATGGCAAAGGAAGCAC+TGG + chr2.2:3334304-3334323 MS.gene051959:CDS 45.0%
! TCAAGCATTGCCTCTCTATC+AGG - chr2.2:3336506-3336525 None:intergenic 45.0%
! TCAAGCTGGTCTCAAGATCT+GGG + chr2.2:3336710-3336729 MS.gene051959:CDS 45.0%
! TCGTTGCCTGTCATTTCACT+TGG + chr2.2:3339342-3339361 MS.gene051959:CDS 45.0%
! TTGAGGCTGGTTGCAATACA+CGG - chr2.2:3334075-3334094 None:intergenic 45.0%
! TTTTCTGCAAAGGAGCTGAC+AGG + chr2.2:3336008-3336027 MS.gene051959:CDS 45.0%
!! ACATTGGTGTTGGAATCAGC+GGG + chr2.2:3338053-3338072 MS.gene051959:CDS 45.0%
!! ATCATGCTCAGTGGACTGAA+AGG - chr2.2:3334257-3334276 None:intergenic 45.0%
!! ATGCAATGGTATGGTGCCAT+TGG + chr2.2:3337827-3337846 MS.gene051959:intron 45.0%
!! CTCCACTTTGGTGCCATTAA+TGG - chr2.2:3337855-3337874 None:intergenic 45.0%
!! GACATTGGTGTTGGAATCAG+CGG + chr2.2:3338052-3338071 MS.gene051959:CDS 45.0%
!! GATTGGTTCTATGGCACCAA+TGG - chr2.2:3337743-3337762 None:intergenic 45.0%
!! TATGGGGTGGTCATTTTCAC+TGG + chr2.2:3334761-3334780 MS.gene051959:CDS 45.0%
!! TCCAGTTTTATCGGAGAGGA+TGG - chr2.2:3335212-3335231 None:intergenic 45.0%
!! TTGTGAAGGTATTACAGGCC+AGG + chr2.2:3335089-3335108 MS.gene051959:CDS 45.0%
!! TTTTGATTGCCTGAGGGTGA+GGG - chr2.2:3337063-3337082 None:intergenic 45.0%
!!! CTCCTTTGGCTTTTGTTGTG+GGG + chr2.2:3334279-3334298 MS.gene051959:CDS 45.0%
!!! GCTCCTTTGGCTTTTGTTGT+GGG + chr2.2:3334278-3334297 MS.gene051959:CDS 45.0%
!!! TGCTCCTTTGGCTTTTGTTG+TGG + chr2.2:3334277-3334296 MS.gene051959:CDS 45.0%
!!! TTTATTTTTTATTTTTTCTA+TGG + chr2.2:3336871-3336890 MS.gene051959:intron 5.0%
ACAGTGCATGGCAGAACTCT+TGG - chr2.2:3337648-3337667 None:intergenic 50.0%
ACTCTCTGCTTCCAGAGAAG+AGG + chr2.2:3336204-3336223 MS.gene051959:intron 50.0%
AGCCCCACAACAAAAGCCAA+AGG - chr2.2:3334284-3334303 None:intergenic 50.0%
AGGCCTGCCATAAAGGGATT+TGG + chr2.2:3335475-3335494 MS.gene051959:CDS 50.0%
AGTATGAGACCCCAAAGTGG+TGG + chr2.2:3334933-3334952 MS.gene051959:CDS 50.0%
ATTGTGCGCTACTGCACTCT+TGG + chr2.2:3337583-3337602 MS.gene051959:intron 50.0%
CAAGAGTGGAAGCAACGATC+AGG + chr2.2:3340070-3340089 MS.gene051959:CDS 50.0%
CAAGATCTGGGTCTTGACAG+GGG + chr2.2:3336722-3336741 MS.gene051959:CDS 50.0%
CAAGTGGTTGAAAGGTGAGG+TGG + chr2.2:3335754-3335773 MS.gene051959:intron 50.0%
CACAGAGTATGTCTATGGGG+TGG + chr2.2:3334748-3334767 MS.gene051959:CDS 50.0%
CACCAATGGCACCATTGCTA+TGG - chr2.2:3337729-3337748 None:intergenic 50.0%
CCGTGTATCTCCCAAGCAAA+AGG + chr2.2:3337255-3337274 MS.gene051959:CDS 50.0%
CGAGGATGGGATATGCTATG+TGG + chr2.2:3334502-3334521 MS.gene051959:CDS 50.0%
CGCGTACGACAACACTTGAT+TGG - chr2.2:3335714-3335733 None:intergenic 50.0%
CTCAAGATCTGGGTCTTGAC+AGG + chr2.2:3336720-3336739 MS.gene051959:CDS 50.0%
CTCCTCATTAAGCTCGGGAA+TGG - chr2.2:3335599-3335618 None:intergenic 50.0%
CTGGAAGCAGAGAGTTACTG+TGG - chr2.2:3336199-3336218 None:intergenic 50.0%
GACAAGGAAGAAGATGGCGA+GGG - chr2.2:3339581-3339600 None:intergenic 50.0%
GATGGCTACTGATCTTGAGG+AGG + chr2.2:3335330-3335349 MS.gene051959:CDS 50.0%
GATGTGTGTGGATGTGTGTG+GGG + chr2.2:3337772-3337791 MS.gene051959:intron 50.0%
GCAGATGGCTACTGATCTTG+AGG + chr2.2:3335327-3335346 MS.gene051959:CDS 50.0%
GGAAGACAAGCTGCAGAAAG+GGG + chr2.2:3336580-3336599 MS.gene051959:CDS 50.0%
GGACAAGTGGTTGAAAGGTG+AGG + chr2.2:3335751-3335770 MS.gene051959:intron 50.0%
GGATCAAAGGCCTGCCATAA+AGG + chr2.2:3335468-3335487 MS.gene051959:CDS 50.0%
GGCCATTCAGACGAAATGCT+TGG - chr2.2:3339621-3339640 None:intergenic 50.0%
GGCCGTAAATACCACCACTT+TGG - chr2.2:3334947-3334966 None:intergenic 50.0%
GGCTCATTGTCAAGGCAATC+TGG - chr2.2:3339708-3339727 None:intergenic 50.0%
GGGAATGGCAGTATGGCAAA+CGG - chr2.2:3335584-3335603 None:intergenic 50.0%
GGGTTTGAGAACATTAGCCC+TGG + chr2.2:3336406-3336425 MS.gene051959:CDS 50.0%
GGTCCTTGCTGATATAGTGC+AGG - chr2.2:3339496-3339515 None:intergenic 50.0%
GGTCTTGACAGGGGATAAGA+TGG + chr2.2:3336731-3336750 MS.gene051959:CDS 50.0%
GTGGAAGACAAGCTGCAGAA+AGG + chr2.2:3336578-3336597 MS.gene051959:CDS 50.0%
GTGTGTGATGTGTGTGTGTG+TGG + chr2.2:3337799-3337818 MS.gene051959:intron 50.0%
TAAGCTCGGGAATGGCAGTA+TGG - chr2.2:3335591-3335610 None:intergenic 50.0%
TACACGGTTCTCGAGTAACC+GGG - chr2.2:3334059-3334078 None:intergenic 50.0%
TCCTCCGAGATTCAAAGCTC+AGG + chr2.2:3334723-3334742 MS.gene051959:CDS 50.0%
TGACAAGGAAGAAGATGGCG+AGG - chr2.2:3339582-3339601 None:intergenic 50.0%
TGCCATTCCCGAGCTTAATG+AGG + chr2.2:3335594-3335613 MS.gene051959:CDS 50.0%
TGTGATGTGTGTGTGTGTGG+TGG + chr2.2:3337802-3337821 MS.gene051959:intron 50.0%
TGTGGGGCTTAGTATGGCAA+AGG + chr2.2:3334295-3334314 MS.gene051959:CDS 50.0%
TTCTGGTAGTCCATGGACAC+TGG + chr2.2:3339005-3339024 MS.gene051959:CDS 50.0%
TTTGATTGCCTGAGGGTGAG+GGG - chr2.2:3337062-3337081 None:intergenic 50.0%
! AAGTGGATGAGGCACCTCAT+CGG - chr2.2:3334030-3334049 None:intergenic 50.0%
! ACTTGCTGCAGCAAAGCAGA+TGG + chr2.2:3335312-3335331 MS.gene051959:CDS 50.0%
! CTCAAGCTGGTCTCAAGATC+TGG + chr2.2:3336709-3336728 MS.gene051959:CDS 50.0%
! GCCGGCTCATGAATGGTAAT+TGG + chr2.2:3335509-3335528 MS.gene051959:CDS 50.0%
! GTGGTGGAGATGCAATGGTA+TGG + chr2.2:3337818-3337837 MS.gene051959:intron 50.0%
! TCTCGGAGGAGTATATGACC+AGG - chr2.2:3334713-3334732 None:intergenic 50.0%
! TCTGCATGACTTTGCTGTCG+TGG - chr2.2:3334787-3334806 None:intergenic 50.0%
! TGTGCTGCTCATCCTGTTCA+AGG + chr2.2:3339108-3339127 MS.gene051959:intron 50.0%
! TGTGTGTGGTGGAGATGCAA+TGG + chr2.2:3337813-3337832 MS.gene051959:intron 50.0%
!! AACGGCCAGGATTGGTTCTA+TGG - chr2.2:3337752-3337771 None:intergenic 50.0%
!! AAGCACTGGAGGATTCACGT+AGG + chr2.2:3334318-3334337 MS.gene051959:CDS 50.0%
!! CATTGGTGTTGGAATCAGCG+GGG + chr2.2:3338054-3338073 MS.gene051959:CDS 50.0%
!! CTTTTGATTGCCTGAGGGTG+AGG - chr2.2:3337064-3337083 None:intergenic 50.0%
!! GGTGCCATTAATGGCACCAA+TGG - chr2.2:3337867-3337848 None:intergenic 50.0%
!! GGTGCCATTGGTGCCATTAA+TGG + chr2.2:3337839-3337858 MS.gene051959:intron 50.0%
!! TATGGCAAAGGAAGCACTGG+AGG + chr2.2:3334307-3334326 MS.gene051959:CDS 50.0%
!! TCCTGAGCTTTGAATCTCGG+AGG - chr2.2:3334727-3334746 None:intergenic 50.0%
!! TGCCATAGCAATGGTGCCAT+TGG + chr2.2:3337724-3337743 MS.gene051959:intron 50.0%
!! TGGTGCCATAGAACCAATCC+TGG + chr2.2:3337744-3337763 MS.gene051959:intron 50.0%
!!! GCGTTTTTGGTCTCAAGTCG+TGG + chr2.2:3334396-3334415 MS.gene051959:CDS 50.0%
AACACATGTGGACGAGGGAG+CGG + chr2.2:3340010-3340029 MS.gene051959:CDS 55.0%
AAGGAAGAAGATGGCGAGGG+AGG - chr2.2:3339578-3339597 None:intergenic 55.0%
ACAGGATGAGCAGCACAAGC+AGG - chr2.2:3339105-3339124 None:intergenic 55.0%
ACGAGAGGCAAGCAGCCAAA+AGG - chr2.2:3334220-3334239 None:intergenic 55.0%
ACTGCAGACATGGCTGCTGT+TGG + chr2.2:3339643-3339662 MS.gene051959:CDS 55.0%
AGCAACGATCAGGCAGCTGA+AGG + chr2.2:3340080-3340099 MS.gene051959:CDS 55.0%
AGCTGTTGGGCCTGATAGAG+AGG + chr2.2:3336493-3336512 MS.gene051959:CDS 55.0%
ATCCACACACATCAACGGCC+AGG - chr2.2:3337765-3337784 None:intergenic 55.0%
ATCCTGGCCGTTGATGTGTG+TGG + chr2.2:3337760-3337779 MS.gene051959:intron 55.0%
ATCTCCCAAGCAAAAGGCCC+TGG + chr2.2:3337261-3337280 MS.gene051959:CDS 55.0%
CAACGATCAGGCAGCTGAAG+GGG + chr2.2:3340082-3340101 MS.gene051959:CDS 55.0%
CACACATCAACGGCCAGGAT+TGG - chr2.2:3337760-3337779 None:intergenic 55.0%
CAGGATGAGCAGCACAAGCA+GGG - chr2.2:3339104-3339123 None:intergenic 55.0%
CCTCATCCACTTCAAGGTCC+CGG + chr2.2:3334038-3334057 MS.gene051959:CDS 55.0%
CTATGCTGCCCCACACAAAG+AGG - chr2.2:3339750-3339769 None:intergenic 55.0%
GAATGGCCAGACTGCAGACA+TGG + chr2.2:3339633-3339652 MS.gene051959:CDS 55.0%
GACAAGCTGCAGAAAGGGGT+AGG + chr2.2:3336584-3336603 MS.gene051959:intron 55.0%
GAGTAACCGGGACCTTGAAG+TGG - chr2.2:3334047-3334066 None:intergenic 55.0%
GCAACGATCAGGCAGCTGAA+GGG + chr2.2:3340081-3340100 MS.gene051959:CDS 55.0%
GGAGGATTAGGGCAAAGCTC+CGG + chr2.2:3333961-3333980 MS.gene051959:CDS 55.0%
GGCACCTCATCGGCAGTATT+CGG - chr2.2:3334020-3334039 None:intergenic 55.0%
GTTGACAGCCCAGATGATGC+AGG - chr2.2:3339683-3339702 None:intergenic 55.0%
GTTGGAATCAGCGGGGTTGA+AGG + chr2.2:3338061-3338080 MS.gene051959:CDS 55.0%
TAGGTATACCCCTCACCCTC+AGG + chr2.2:3337051-3337070 MS.gene051959:intron 55.0%
TCTTGTTGGGGCTACTGCTG+TGG + chr2.2:3336559-3336578 MS.gene051959:CDS 55.0%
TGCGGGCTTCTCTGGTCAAT+CGG + chr2.2:3339275-3339294 MS.gene051959:CDS 55.0%
TTGACCAGAGAAGCCCGCAA+AGG - chr2.2:3339274-3339293 None:intergenic 55.0%
TTTGACGTCCGTGCTTCAGC+AGG - chr2.2:3335160-3335179 None:intergenic 55.0%
! CCTACCAGGGCCTTTTGCTT+GGG - chr2.2:3337268-3337287 None:intergenic 55.0%
! GAGGTGCCTCATCCACTTCA+AGG + chr2.2:3334032-3334051 MS.gene051959:CDS 55.0%
! GATGACAGCCGGCTCATGAA+TGG + chr2.2:3335502-3335521 MS.gene051959:CDS 55.0%
! GGAGCGGTCTAAAGCAAGAC+AGG + chr2.2:3340026-3340045 MS.gene051959:CDS 55.0%
! TCCTACCAGGGCCTTTTGCT+TGG - chr2.2:3337269-3337288 None:intergenic 55.0%
!!! TCGGTTTTTGGAGCGGCTTC+TGG + chr2.2:3338988-3339007 MS.gene051959:CDS 55.0%
CAGCAGCCATGTCTGCAGTC+TGG - chr2.2:3339642-3339661 None:intergenic 60.0%
CCCAAGCAAAAGGCCCTGGT+AGG + chr2.2:3337265-3337284 MS.gene051959:intron 60.0%
CCGGGACCTTGAAGTGGATG+AGG - chr2.2:3334041-3334060 None:intergenic 60.0%
GAGCGGCTTCTGGTAGTCCA+TGG + chr2.2:3338998-3339017 MS.gene051959:CDS 60.0%
GCCACGGGTGAGGAGGATTA+GGG + chr2.2:3333950-3333969 MS.gene051959:CDS 60.0%
GGATTAGGGCAAAGCTCCGG+TGG + chr2.2:3333964-3333983 MS.gene051959:CDS 60.0%
TCGGCCGAATACTGCCGATG+AGG + chr2.2:3334013-3334032 MS.gene051959:CDS 60.0%
TGCCACGGGTGAGGAGGATT+AGG + chr2.2:3333949-3333968 MS.gene051959:CDS 60.0%
TGTGGGGCAGCATAGCCAGT+TGG + chr2.2:3339755-3339774 MS.gene051959:CDS 60.0%
! CAGCGGGGTTGAAGGTATGC+AGG + chr2.2:3338069-3338088 MS.gene051959:CDS 60.0%
CCGGGACTCCTGCTGAAGCA+CGG + chr2.2:3335149-3335168 MS.gene051959:CDS 65.0%
CCGTGCTTCAGCAGGAGTCC+CGG - chr2.2:3335152-3335171 None:intergenic 65.0%
GAGGCCTTTGCGGGCTTCTC+TGG + chr2.2:3339267-3339286 MS.gene051959:CDS 65.0%
GCCCTAATCCTCCTCACCCG+TGG - chr2.2:3333954-3333973 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.2 gene 3333948 3340152 3333948 ID=MS.gene051959
chr2.2 mRNA 3333948 3340152 3333948 ID=MS.gene051959.t1;Parent=MS.gene051959
chr2.2 exon 3333948 3335767 3333948 ID=MS.gene051959.t1.exon1;Parent=MS.gene051959.t1
chr2.2 CDS 3333948 3335767 3333948 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3335919 3336029 3335919 ID=MS.gene051959.t1.exon2;Parent=MS.gene051959.t1
chr2.2 CDS 3335919 3336029 3335919 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3336325 3336601 3336325 ID=MS.gene051959.t1.exon3;Parent=MS.gene051959.t1
chr2.2 CDS 3336325 3336601 3336325 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3336684 3336772 3336684 ID=MS.gene051959.t1.exon4;Parent=MS.gene051959.t1
chr2.2 CDS 3336684 3336772 3336684 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3336899 3336986 3336899 ID=MS.gene051959.t1.exon5;Parent=MS.gene051959.t1
chr2.2 CDS 3336899 3336986 3336899 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3337073 3337282 3337073 ID=MS.gene051959.t1.exon6;Parent=MS.gene051959.t1
chr2.2 CDS 3337073 3337282 3337073 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3337965 3338090 3337965 ID=MS.gene051959.t1.exon7;Parent=MS.gene051959.t1
chr2.2 CDS 3337965 3338090 3337965 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3338953 3339051 3338953 ID=MS.gene051959.t1.exon8;Parent=MS.gene051959.t1
chr2.2 CDS 3338953 3339051 3338953 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3339213 3339404 3339213 ID=MS.gene051959.t1.exon9;Parent=MS.gene051959.t1
chr2.2 CDS 3339213 3339404 3339213 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
chr2.2 exon 3339490 3340152 3339490 ID=MS.gene051959.t1.exon10;Parent=MS.gene051959.t1
chr2.2 CDS 3339490 3340152 3339490 ID=cds.MS.gene051959.t1;Parent=MS.gene051959.t1
Gene Sequence

>MS.gene051959

ATGCCACGGGTGAGGAGGATTAGGGCAAAGCTCCGGTGGAGCAATCTTTACACGTTTGGTTGTCTTCGGCCGAATACTGCCGATGAGGTGCCTCATCCACTTCAAGGTCCCGGTTACTCGAGAACCGTGTATTGCAACCAGCCTCAAATCCATGAAAAGAAATCTTTATTTTACTGCAAGAATAATATATCAACGACCAAATACAATGCTATTATGTTTTTTCCTAAGGCGCTGTTTGAACAGTTTCGAAGGGTTGCTAATATATACTTCCTTTTGGCTGCTTGCCTCTCGTTATCACCAATTTCACCTTTCAGTCCACTGAGCATGATTGCTCCTTTGGCTTTTGTTGTGGGGCTTAGTATGGCAAAGGAAGCACTGGAGGATTCACGTAGGTTCCTTCAAGATGTTAAGGTTAATCGCCGGAAAGCTAGTTTCCATAAAGGCAATGGCGTTTTTGGTCTCAAGTCGTGGCAGAAAATTATGGTTGGGGATATAGTGAAAGTAGAAAAGGATCAATTTTTTCCAGCTGACTTGCTTCTATTGTCTTCAAGTTACGAGGATGGGATATGCTATGTGGAAACCATGAATTTAGATGGAGAGACCAACTTGAAGGTGAAAAGATCATTGGAGGCTACCTTTTCCCTTGATAATGATGGAGCTTTTAAGGATTTCTCTGGAACAATACGTTGCGAAGACCCAAATCCCAATCTTTACACTTTTGTTGGGAACTTTGAGTACGAACGTCAGGTTTATCCTCTTGATCCTGGTCATATACTCCTCCGAGATTCAAAGCTCAGGAACACAGAGTATGTCTATGGGGTGGTCATTTTCACTGGCCACGACAGCAAAGTCATGCAGAATTCTACAAAATCCCCTTCAAAAAGAAGCAGAATAGAGAAAAAGATGGATTATATCATATACACTCTTTTCTCTGTCCTTATAGCGATATCATTTATTAGTTCAGTAGGATTTGTTGTTAAGACTAAGTATGAGACCCCAAAGTGGTGGTATTTACGGCCCGACCAGATTGAATATCAGTATGATCCTAAGAAACTTGGATTTGCTGGGATGAGCCATCTGATCACTGCTCTTATTCTTTATGGATATTTGATACCCATCTCTCTCTATGTTTCAATTGAGGTTGTGAAGGTATTACAGGCCAGGTTCATTAACCAAGACCTTCACATGTATGATGAAGAAACCGGGACTCCTGCTGAAGCACGGACGTCAAATTTGAATGAAGAGTTGGGTCAGGTAGACACCATCCTCTCCGATAAAACTGGAACTTTAACCTGCAATCAGATGGACTTTTTGAAGTGCTCCATTGCTGGAATTTCCTATGGTGTACGTTCCAGTGAAGTTGAACTTGCTGCAGCAAAGCAGATGGCTACTGATCTTGAGGAGGAAGATTTTGATCTCTCTAATTTCCCCATGCAAAAGAAGGGTAAAGCGCCATGGGAAAATGTTGGAAGAGCTGAAGAAATTGAACTTGAGACAGTTGTTACTTCTAAGGATGGTGAGGATCAAAGGCCTGCCATAAAGGGATTTGGTTTTGATGACAGCCGGCTCATGAATGGTAATTGGTCGAAAGATCCCAATGCTGAAGTCATTTTGTTGTTTTTCCGGATACTAGCCGTTTGCCATACTGCCATTCCCGAGCTTAATGAGGAGAGCAACAGCTGTACTTACGAAGCTGAATCACCTGATGAAGGGGCTTTTCTTGTAGCTGCTAGAGAATTTGGTTTTGAATTTTGTAGAAGAACCCAATCAAGTGTTGTCGTACGCGAAAGAATTTCTGCTTCTGGACAAGTGGTTGAAAGGTGAGGTGGACATTTATGAAGTCTATTGTGCATTTCCGGTTTTTTCTTCGGGAATACTTGCTAGGGCTTTTACTTTTGAATCACCATGTCATATTTCTTGGCCGTAATATCCGATGTTTGTTTATTTTTGTGTTTCGGTTGAATTGTACAGAGAGTATAAAATACTGAATCTGCTGGAATTTACTAGCAAAAGAAAGCGTATGTCAGTGATTGTACGTGATGAGGAGGGAAACATTATTCTTTTCTGCAAAGGAGCTGACAGGTTAGCCTAGTAATGTGACTTCTGTCTATTCTGTTTATTGAACATATGAGGTTAATGATCAATTAAGACCTTCTATCGGTTTCAACATCAAAATTAAAATCCTCTTCAAGCTTGTGGAGTTTGTATTCGACTTACTGCTAGTAGTAGCACAGTTTAGTCTATATAACCACAGTAACTCTCTGCTTCCAGAGAAGAGGCTTGCATTAACACACACGCACACACACACAAGCTGTCATAGATGGACTTTTATCTTTCCTCTCTAAACTTTGACATCCATTATTTTCTTGTTGTACAGTATCATATTTGATAGACTATCTAAGAATGGAAAGAAGTATTTGGAGACTACTTCTAGGCATTTGAATGAATATGGAGAGGTGGGTTTGAGAACATTAGCCCTGGCTTACAGAAAGCTTGATGAACAAGAGTACTCTGATTGGAACAATGAGTTTCAGAAAGCTAAGACAGCTGTTGGGCCTGATAGAGAGGCAATGCTTGAGAAGGTATCAGATAGTATGGAAAGAGAGTTGATTCTTGTTGGGGCTACTGCTGTGGAAGACAAGCTGCAGAAAGGGGTAGGCTTGATCATTACATGTGGTCAATATATATTGCTGCTTTCCTATAATTTTTTCACGTACAAATTTTTATTCTTCTCAGGTGCCTCAATGCATTGATAAACTTGCTCAAGCTGGTCTCAAGATCTGGGTCTTGACAGGGGATAAGATGGAAACTGCAATCAACATTGGGTATGCGTACTGCAAATTATTTAACCCCACAACACTATCTGCATTTCAATTTTAAGTTTGAAGTTACTCAAGACAGCCTCTTCAAATGAGTTTGGTGATTTATTTTTTATTTTTTCTATGGTGCAGATTTGCATGTAGTTTACTTCGACAGGGCATGAAGCAAATCTGTATCTCTACTACAAATTCAGAATCAGTGATCAATGATGGGAAAGAGGTATTCCTTTCACTTAGATTGAGCAGAAAAAATTTACTATTTCGCCATGGATTCCATCTGATGTTAGGTATACCCCTCACCCTCAGGCAATCAAAAGCAACATCTTGACTCAAATCACCAATGCCTCACAATTGATGAATCTGGAGAAGGACCCACATGCCGCTTTTGCGTTAATTATTGACGGAAAAACTCTAACATATGCTTTAGAAGATGATATCAAACACCAATTTTTGGGATTAGCTGTTAATTGTGCATCTGTCATTTGCTGCCGTGTATCTCCCAAGCAAAAGGCCCTGGTAGGATCTTTTTTCTTTTCCCTTTGTATCTTTCTGGTTTCTATTTGATATTCTTTTACTGCATTTCATTAGTTGATCACTATAAATCGTGCTACTTGCCTAAGCTATCAAACTCGAGAGTTTTGGTAAACTTGCGTAGTCTCGCAAACTAGACTTGTAAAATCGTAATAGTTAACTCAATATTGAAAATACCTACATATGAGATATATAGATGTTGTAATTATCATAAAAATAATAAAATTCAACATTTCAGCTTGAGAGTTTAACGACCATGCTACTTACACAAATATTGGAGTAACAATTGTGCGCTACTGCACTCTTGGCTCTATGTTGATGTTAGATGGGAAAAATTAGGTGTGGATCCAAGAGTTCTGCCATGCACTGTTATTGAAATACTTCTGTAGGTAGATTTTATATAGTATAAGTAGGAAAATACTTCAGTGCCATAGCAATGGTGCCATTGGTGCCATAGAACCAATCCTGGCCGTTGATGTGTGTGGATGTGTGTGGGGATGTGTGTGTGATGTGTGTGTGTGTGGTGGAGATGCAATGGTATGGTGCCATTGGTGCCATTAATGGCACCAAAGTGGAGTCCGTATAAGTACTATCACTGTACCAACACTAAAAGTATGAAGTCGGTACTGTTTGATTGCATCTTCATTCCTCAATCTTTTGGCATCAGGTAACAAGGTTAGTGAAAGAAGGAACTGGGAAGACCACTTTAGCAATAGGTGATGGTGCAAATGATGTTGGCATGATTCAAGAAGCTGACATTGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGTCAGTTCAAGCTCTTTAAATATAATTATGCAACACAAAATTATAACTGCAAATGGTGGATTACTGGATTTTAACATTTATGTTTTTTAGTTGCAACAGCATATATTTCATAGTTATAAAACATACCAAGTTTTGATTTCATAAACCTTAAGCATTTTAAAAATGAATGGGGATGGTGACAGAGAAATCTATCATGTTTACATGTGTGGACGCTGAAACAGATTTCTTGTCAAGCCTTTTTGGTGATGTTCTTATTAATCAGTATTGACAATGCGATAGAGAAGTGAATCTCTTTTTGCTTTGTTAATCATTCATTTTGATTTCATATAGCTTAATCTCTATAAAATTAGAAAAGCTGCAAATCTGCAAAGATGAAGCTTCCCTTCTTTGATTGTTCTACGTTCTAATATTTCTTAAAATATTTTACTATGGAGAACCATATGAGGAGCATCCAGTCTAAATTTAGTATTTACTTATTTCTGATGAGAAGCTAAAATTTCCAATTTAATACAAACAATACTATTGTGCAACCTATCTGCTGTCCATGATATGAACGTTTTGTTGAGGCACCATTACATGAAGTCGTGAGCGTTAAAAGAACATGCTGATCAATGTTTTAAATTTAGGAAATTTCTTTGCTTCTGTTCATGTGAAATAGTGTAAATTGATTGACTTGTTGATTGGAGTTCATGTTCACTTGATCAATAATGAAAAACTATTTAGTTAAAATCTATGTTGGCCTGTAAACACTTCTTAATTGTTACTATCATCTCTAAAGTCAAGAAAACACGTGTTTTTCCTATTTGGAAAGCATGTAACATGTATGGAAGTTATATAACTCAATCTGGCAAATTCTTTTCAGGCGGTGATGGCTAGTGACTTTTCCATTGCTCAATTTCGGTTTTTGGAGCGGCTTCTGGTAGTCCATGGACACTGGTGTTACAAGAGAATTGCACAAATGGTAATTGGTATATGCATCTTGATTGTTATTCTCAGATTTTGAATGTCTTCCCTGCTTGTGCTGCTCATCCTGTTCAAGGACAGTAATGCATGTAACATTTTTTTCTTTTTCTATCTGTTATCCAATATTTCCCATCTAAACTGATTTTTTATGCATTCCAGATATGTTATTTCTTCTACAAAAATATAGCATTTGGCCTCACAATATTCTATTTTGAGGCCTTTGCGGGCTTCTCTGGTCAATCGGTTTATAATGATTGGTACATGATATTGTTTAACGTCATTCTTACATCGTTGCCTGTCATTTCACTTGGAGTTTTTGAACAAGATGTGCCATCTGAAGTTTGCTTACAGGTTTGTTTTCTTGAAATGCCTTGTGGGTTTCATATTTTCATCCATGTTTGGATAACTCAACCTCTGACATGCTAGTTCTATGCAGTTTCCTGCACTATATCAGCAAGGACCCAAAAATTTGTTCTTTGACTGGTATAGAATATTGGGATGGATGGGGAATGGTCTGTACTCCTCCCTCGCCATCTTCTTCCTTGTCATCATCATCTTCCATGACCAAGCATTTCGTCTGAATGGCCAGACTGCAGACATGGCTGCTGTTGGTACCACAATGTTCACCTGCATCATCTGGGCTGTCAACTGCCAGATTGCCTTGACAATGAGCCATTTTACATGGATACAACACCTCTTTGTGTGGGGCAGCATAGCCAGTTGGTACCTGTTTCTCTTATTATATGGCATGCTTTCTCCACATTATTCCATGACTGCGTACCAAATATTGGTTGAAGTGCTTGCTCCCGCTCCTATTTATTGGACAGCAACCATTTTAGTAACTGTTACATGCAATCTTCCTTATCTTGCCCACATATCGTTCCAAAGGTGTTTTAATCCCATGGATCATCACATTATCCAAGAAATCAAGTACTACAAGAAGGACGTTGAAGATCAACACATGTGGACGAGGGAGCGGTCTAAAGCAAGACAGGAAACAAAGATTGGATTCACAGCAAGAGTGGAAGCAACGATCAGGCAGCTGAAGGGGAAGCTGCAGAAGAAGCAAACATCAGGAGGGGTTTTTTCCCCATCATGA

Protein sequence

>MS.gene051959.t1

MPRVRRIRAKLRWSNLYTFGCLRPNTADEVPHPLQGPGYSRTVYCNQPQIHEKKSLFYCKNNISTTKYNAIMFFPKALFEQFRRVANIYFLLAACLSLSPISPFSPLSMIAPLAFVVGLSMAKEALEDSRRFLQDVKVNRRKASFHKGNGVFGLKSWQKIMVGDIVKVEKDQFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLEATFSLDNDGAFKDFSGTIRCEDPNPNLYTFVGNFEYERQVYPLDPGHILLRDSKLRNTEYVYGVVIFTGHDSKVMQNSTKSPSKRSRIEKKMDYIIYTLFSVLIAISFISSVGFVVKTKYETPKWWYLRPDQIEYQYDPKKLGFAGMSHLITALILYGYLIPISLYVSIEVVKVLQARFINQDLHMYDEETGTPAEARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGISYGVRSSEVELAAAKQMATDLEEEDFDLSNFPMQKKGKAPWENVGRAEEIELETVVTSKDGEDQRPAIKGFGFDDSRLMNGNWSKDPNAEVILLFFRILAVCHTAIPELNEESNSCTYEAESPDEGAFLVAAREFGFEFCRRTQSSVVVRERISASGQVVEREYKILNLLEFTSKRKRMSVIVRDEEGNIILFCKGADSIIFDRLSKNGKKYLETTSRHLNEYGEVGLRTLALAYRKLDEQEYSDWNNEFQKAKTAVGPDREAMLEKVSDSMERELILVGATAVEDKLQKGVPQCIDKLAQAGLKIWVLTGDKMETAINIGFACSLLRQGMKQICISTTNSESVINDGKEAIKSNILTQITNASQLMNLEKDPHAAFALIIDGKTLTYALEDDIKHQFLGLAVNCASVICCRVSPKQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAFAGFSGQSVYNDWYMILFNVILTSLPVISLGVFEQDVPSEVCLQFPALYQQGPKNLFFDWYRILGWMGNGLYSSLAIFFLVIIIFHDQAFRLNGQTADMAAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLFVWGSIASWYLFLLLYGMLSPHYSMTAYQILVEVLAPAPIYWTATILVTVTCNLPYLAHISFQRCFNPMDHHIIQEIKYYKKDVEDQHMWTRERSKARQETKIGFTARVEATIRQLKGKLQKKQTSGGVFSPS