AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34196

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34196.t1 MTR_8g059170 96.960 329 10 0 1 329 1 329 0.0 669
MS.gene34196.t1 MTR_2g079990 63.873 346 100 8 1 326 3 343 7.06e-146 415
MS.gene34196.t1 MTR_2g079990 59.091 374 100 9 1 326 3 371 1.48e-139 400
MS.gene34196.t1 MTR_3g088110 70.552 163 46 2 10 171 3 164 9.81e-79 242
MS.gene34196.t1 MTR_2g080010 64.740 173 50 3 11 172 12 184 3.54e-74 233
MS.gene34196.t1 MTR_7g085220 46.233 292 112 10 1 266 1 273 3.91e-74 232
MS.gene34196.t1 MTR_4g089135 63.934 183 43 4 14 173 15 197 8.13e-74 231
MS.gene34196.t1 MTR_8g094580 68.944 161 47 2 12 170 5 164 1.65e-73 229
MS.gene34196.t1 MTR_3g096920 67.683 164 45 3 11 170 4 163 3.72e-73 228
MS.gene34196.t1 MTR_5g041940 62.500 160 58 1 12 169 1 160 2.31e-71 222
MS.gene34196.t1 MTR_2157s0010 56.190 210 72 6 14 209 8 211 5.21e-71 221
MS.gene34196.t1 MTR_4g081870 63.399 153 54 1 14 164 9 161 7.50e-70 219
MS.gene34196.t1 MTR_7g100990 57.436 195 73 4 5 195 2 190 3.65e-69 219
MS.gene34196.t1 MTR_3g096920 56.061 198 48 3 11 170 4 200 1.41e-67 215
MS.gene34196.t1 MTR_2g093810 59.770 174 61 3 10 174 10 183 4.81e-67 213
MS.gene34196.t1 MTR_2g064090 53.179 173 74 3 9 179 1 168 4.39e-60 196
MS.gene34196.t1 MTR_6g012670 54.375 160 73 0 11 170 17 176 4.56e-59 192
MS.gene34196.t1 MTR_6g084430 56.329 158 65 2 13 170 4 157 7.74e-59 192
MS.gene34196.t1 MTR_4g108760 55.625 160 71 0 11 170 14 173 8.37e-59 193
MS.gene34196.t1 MTR_5g076850 56.875 160 65 2 9 166 1 158 1.64e-58 199
MS.gene34196.t1 MTR_3g435150 53.631 179 83 0 11 189 13 191 2.77e-58 190
MS.gene34196.t1 MTR_7g085260 55.828 163 68 1 12 170 15 177 3.46e-57 189
MS.gene34196.t1 MTR_3g109340 54.375 160 68 2 13 170 21 177 5.77e-56 186
MS.gene34196.t1 MTR_3g064580 57.500 160 65 2 9 166 1 159 6.73e-56 192
MS.gene34196.t1 MTR_6g477900 52.830 159 71 2 9 165 1 157 9.53e-56 181
MS.gene34196.t1 MTR_3g070030 47.120 191 98 3 11 198 16 206 4.09e-55 183
MS.gene34196.t1 MTR_3g109340 54.375 160 67 2 13 170 21 176 4.91e-55 183
MS.gene34196.t1 MTR_4g134460 58.000 150 58 2 16 164 56 201 5.73e-55 185
MS.gene34196.t1 MTR_2g078700 55.769 156 67 1 14 167 23 178 3.64e-54 182
MS.gene34196.t1 MTR_5g040420 56.024 166 64 6 16 172 16 181 5.21e-54 181
MS.gene34196.t1 MTR_1g008740 52.174 161 71 3 13 170 12 169 5.73e-54 180
MS.gene34196.t1 MTR_1g008740 52.174 161 71 3 13 170 26 183 5.75e-54 181
MS.gene34196.t1 MTR_6g032770 52.695 167 77 1 12 176 16 182 4.13e-53 179
MS.gene34196.t1 MTR_4g035590 53.896 154 63 2 14 164 8 156 9.99e-53 177
MS.gene34196.t1 MTR_2g064470 40.807 223 121 5 9 228 6 220 1.70e-52 175
MS.gene34196.t1 MTR_2g062730 50.296 169 73 4 11 172 7 171 2.21e-52 176
MS.gene34196.t1 MTR_6g011860 53.086 162 68 3 14 167 15 176 3.06e-52 177
MS.gene34196.t1 MTR_7g011120 48.503 167 79 1 11 170 5 171 4.05e-52 174
MS.gene34196.t1 MTR_8g467490 51.497 167 71 5 16 172 16 182 4.16e-52 177
MS.gene34196.t1 MTR_7g011130 46.821 173 79 1 11 170 16 188 4.82e-51 173
MS.gene34196.t1 MTR_1g096430 40.724 221 109 4 14 231 7 208 6.32e-51 172
MS.gene34196.t1 MTR_5g014300 52.121 165 65 3 13 168 5 164 1.02e-50 171
MS.gene34196.t1 MTR_8g024480 48.780 164 74 3 11 164 12 175 4.45e-50 172
MS.gene34196.t1 MTR_7g005280 54.321 162 65 4 11 170 12 166 4.94e-50 167
MS.gene34196.t1 MTR_2g068920 45.933 209 91 7 16 207 23 226 8.31e-50 168
MS.gene34196.t1 MTR_4g036030 47.468 158 76 2 14 168 7 160 4.01e-49 167
MS.gene34196.t1 MTR_8g076110 48.428 159 75 2 14 169 6 160 4.01e-49 167
MS.gene34196.t1 MTR_4g101680 45.029 171 87 2 14 181 7 173 1.03e-48 167
MS.gene34196.t1 MTR_5g021710 46.875 160 78 2 14 170 8 163 1.94e-48 166
MS.gene34196.t1 MTR_2g068880 51.744 172 67 6 16 172 24 194 1.29e-47 162
MS.gene34196.t1 MTR_5g090970 45.596 193 95 2 16 198 20 212 1.63e-47 162
MS.gene34196.t1 MTR_4g098630 51.829 164 70 4 13 170 5 165 1.72e-46 160
MS.gene34196.t1 MTR_8g094580 70.000 110 30 2 63 170 2 110 1.89e-46 157
MS.gene34196.t1 MTR_5g012080 48.387 155 73 3 14 164 7 158 1.93e-46 160
MS.gene34196.t1 MTR_5g090970 45.596 193 94 3 16 198 20 211 8.02e-46 158
MS.gene34196.t1 MTR_3g093040 40.826 218 106 5 9 223 103 300 1.02e-45 158
MS.gene34196.t1 MTR_1g069805 43.956 182 92 3 13 192 9 182 3.86e-45 155
MS.gene34196.t1 MTR_4g075980 49.375 160 70 3 11 167 13 164 1.47e-44 154
MS.gene34196.t1 MTR_1g090720 50.000 160 74 2 13 166 41 200 2.33e-44 158
MS.gene34196.t1 MTR_5g069030 39.676 247 129 6 9 244 20 257 3.17e-44 160
MS.gene34196.t1 MTR_7g097090 48.684 152 70 2 13 162 9 154 3.18e-44 153
MS.gene34196.t1 MTR_2g086880 43.548 186 84 5 9 193 13 178 7.94e-44 157
MS.gene34196.t1 MTR_2g086880 44.505 182 80 5 13 193 17 178 8.66e-44 158
MS.gene34196.t1 MTR_3g093050 50.920 163 74 3 9 168 17 176 1.11e-43 158
MS.gene34196.t1 MTR_3g116070 56.589 129 53 2 14 139 23 151 1.22e-43 153
MS.gene34196.t1 MTR_3g093050 50.920 163 74 3 9 168 17 176 1.48e-43 158
MS.gene34196.t1 MTR_1g097300 46.795 156 79 3 12 165 17 170 8.67e-43 155
MS.gene34196.t1 MTR_0036s0150 47.273 165 75 4 12 170 3 161 1.24e-42 154
MS.gene34196.t1 MTR_3g096140 45.695 151 78 2 16 164 9 157 1.68e-42 148
MS.gene34196.t1 MTR_3g098810 48.466 163 74 3 14 168 14 174 3.19e-42 146
MS.gene34196.t1 MTR_8g063550 46.405 153 78 2 14 164 6 156 5.23e-42 149
MS.gene34196.t1 MTR_3g096140 45.695 151 78 2 16 164 9 157 6.87e-42 149
MS.gene34196.t1 MTR_8g063550 46.405 153 78 2 14 164 6 156 9.60e-42 150
MS.gene34196.t1 MTR_8g063550 46.405 153 78 2 14 164 6 156 1.18e-41 150
MS.gene34196.t1 MTR_8g099750 46.405 153 75 3 14 161 14 164 4.81e-41 143
MS.gene34196.t1 MTR_3g070040 41.622 185 101 4 18 198 12 193 3.52e-40 144
MS.gene34196.t1 MTR_1g090723 46.203 158 80 3 16 170 10 165 4.33e-40 149
MS.gene34196.t1 MTR_1g090723 46.203 158 79 3 16 170 10 164 1.59e-39 147
MS.gene34196.t1 MTR_1g090723 46.203 158 79 3 16 170 10 164 1.66e-39 147
MS.gene34196.t1 MTR_8g093580 44.444 153 81 2 14 164 6 156 1.73e-39 145
MS.gene34196.t1 MTR_3g098810 49.324 148 63 3 14 157 14 153 7.21e-38 133
MS.gene34196.t1 MTR_2g086690 46.795 156 75 5 15 162 5 160 2.51e-36 131
MS.gene34196.t1 MTR_4g094302 41.975 162 80 3 14 169 11 164 3.15e-36 129
MS.gene34196.t1 MTR_4g052620 43.671 158 78 5 14 162 5 160 5.98e-36 130
MS.gene34196.t1 MTR_8g023840 47.097 155 65 7 14 161 11 155 3.15e-34 129
MS.gene34196.t1 MTR_3g096140 43.382 136 73 2 31 164 3 136 3.69e-34 128
MS.gene34196.t1 MTR_7g105170 38.650 163 90 6 13 165 3 165 5.30e-34 125
MS.gene34196.t1 MTR_4g094302 46.094 128 59 2 14 139 11 130 7.48e-33 119
MS.gene34196.t1 MTR_8g023900 35.593 236 123 10 1 220 173 395 1.77e-30 120
MS.gene34196.t1 MTR_8g023900 41.026 156 81 6 14 164 12 161 1.84e-27 112
MS.gene34196.t1 MTR_8g023930 35.749 207 112 8 14 212 24 217 2.48e-30 120
MS.gene34196.t1 MTR_8g023860 36.364 220 118 8 14 224 12 218 2.18e-29 117
MS.gene34196.t1 MTR_8g093790 34.951 206 104 7 10 211 6 185 3.99e-25 100
MS.gene34196.t1 MTR_8g023880 37.931 174 77 8 10 164 3 164 2.88e-24 100
MS.gene34196.t1 MTR_7g070140 58.667 75 29 2 67 139 17 91 3.70e-22 90.9
MS.gene34196.t1 MTR_3g096400 32.075 212 124 7 12 211 5 208 4.24e-22 92.8
MS.gene34196.t1 MTR_7g083360 29.333 150 97 5 10 153 6 152 1.51e-18 81.6
MS.gene34196.t1 MTR_7g083330 33.077 130 79 5 12 137 16 141 9.08e-15 72.0
MS.gene34196.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 6.35e-13 69.7
MS.gene34196.t1 MTR_8g102240 32.895 152 76 5 12 139 45 194 6.36e-13 69.7
MS.gene34196.t1 MTR_7g070150 45.205 73 27 3 111 175 9 76 1.70e-12 63.2
MS.gene34196.t1 MTR_1g093680 33.333 141 78 6 14 139 58 197 2.45e-11 64.7
MS.gene34196.t1 MTR_4g078875 31.469 143 80 4 14 139 48 189 2.93e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34196.t1 AT4G27410 63.211 299 82 7 1 295 1 275 6.38e-119 345
MS.gene34196.t1 AT4G27410 60.127 316 81 8 1 295 1 292 2.01e-115 337
MS.gene34196.t1 AT1G52890 64.621 277 81 7 1 263 1 274 1.17e-114 335
MS.gene34196.t1 AT3G15500 65.152 264 75 4 1 251 1 260 4.12e-112 328
MS.gene34196.t1 AT1G01720 70.122 164 46 2 12 173 5 167 1.52e-78 241
MS.gene34196.t1 AT5G08790 61.749 183 66 2 10 189 3 184 8.09e-75 232
MS.gene34196.t1 AT3G04070 65.318 173 48 4 6 168 4 174 5.59e-73 229
MS.gene34196.t1 AT5G63790 61.081 185 62 3 10 188 46 226 1.34e-72 227
MS.gene34196.t1 AT5G63790 61.081 185 62 3 10 188 56 236 1.50e-72 228
MS.gene34196.t1 AT1G61110 64.972 177 51 3 14 179 16 192 2.81e-72 227
MS.gene34196.t1 AT1G77450 52.018 223 100 3 10 231 6 222 6.42e-72 223
MS.gene34196.t1 AT3G04070 61.905 189 44 6 6 168 4 190 9.56e-71 224
MS.gene34196.t1 AT1G69490 65.644 163 52 2 10 169 5 166 1.66e-70 220
MS.gene34196.t1 AT3G15510 65.455 165 42 4 18 169 21 183 7.83e-69 219
MS.gene34196.t1 AT1G52880 65.217 161 46 3 18 168 21 181 1.69e-62 201
MS.gene34196.t1 AT3G18400 48.020 202 96 3 13 214 4 196 6.56e-61 197
MS.gene34196.t1 AT5G07680 55.294 170 76 0 1 170 4 173 2.16e-60 196
MS.gene34196.t1 AT5G61430 57.229 166 70 1 11 176 13 177 3.94e-60 196
MS.gene34196.t1 AT5G07680 57.233 159 68 0 12 170 1 159 5.12e-59 192
MS.gene34196.t1 AT5G39610 56.250 160 70 0 11 170 17 176 1.15e-57 188
MS.gene34196.t1 AT2G24430 54.938 162 68 2 13 172 15 173 3.53e-57 187
MS.gene34196.t1 AT2G24430 54.938 162 68 2 13 172 15 173 3.53e-57 187
MS.gene34196.t1 AT3G04060 50.802 187 85 2 12 197 18 198 8.55e-57 187
MS.gene34196.t1 AT5G53950 49.738 191 88 2 14 196 17 207 8.90e-57 188
MS.gene34196.t1 AT2G02450 53.409 176 75 4 16 188 53 224 9.33e-57 188
MS.gene34196.t1 AT2G02450 53.409 176 75 4 16 188 53 224 1.05e-56 189
MS.gene34196.t1 AT5G18270 50.267 187 91 2 12 197 19 204 1.60e-56 186
MS.gene34196.t1 AT5G18270 49.733 187 92 2 12 197 19 204 4.42e-56 185
MS.gene34196.t1 AT1G65910 54.268 164 71 2 9 170 1 162 5.40e-56 192
MS.gene34196.t1 AT3G03200 54.430 158 69 2 9 164 1 157 5.91e-55 186
MS.gene34196.t1 AT3G15170 47.368 190 96 2 14 199 20 209 1.20e-54 181
MS.gene34196.t1 AT3G29035 54.658 161 73 0 11 171 21 181 1.21e-54 181
MS.gene34196.t1 AT3G17730 49.153 177 84 3 9 181 1 175 1.43e-54 179
MS.gene34196.t1 AT5G17260 54.430 158 69 2 9 164 1 157 2.23e-54 185
MS.gene34196.t1 AT5G39820 50.829 181 66 4 16 173 22 202 7.46e-54 180
MS.gene34196.t1 AT2G43000 48.705 193 88 3 16 199 20 210 1.77e-53 177
MS.gene34196.t1 AT2G33480 56.688 157 63 2 12 168 13 164 1.87e-53 176
MS.gene34196.t1 AT1G26870 53.049 164 68 3 14 168 16 179 9.84e-53 179
MS.gene34196.t1 AT2G33480 55.975 159 59 3 12 168 13 162 1.42e-52 174
MS.gene34196.t1 AT5G13180 56.522 161 62 5 12 170 12 166 5.57e-52 172
MS.gene34196.t1 AT4G17980 50.279 179 85 2 14 188 6 184 1.18e-51 172
MS.gene34196.t1 AT3G12977 42.051 195 103 4 9 203 13 197 1.26e-51 172
MS.gene34196.t1 AT4G17980 50.279 179 85 2 14 188 6 184 1.64e-51 172
MS.gene34196.t1 AT1G54330 53.459 159 67 2 9 165 1 154 2.16e-51 172
MS.gene34196.t1 AT1G71930 45.562 169 85 2 7 172 2 166 2.54e-51 173
MS.gene34196.t1 AT1G71930 45.562 169 85 2 7 172 2 166 2.54e-51 173
MS.gene34196.t1 AT4G10350 51.948 154 69 2 14 164 9 160 2.79e-51 173
MS.gene34196.t1 AT1G33280 51.282 156 68 2 14 166 8 158 9.35e-51 171
MS.gene34196.t1 AT1G56010 48.447 161 79 3 9 166 14 173 1.84e-50 171
MS.gene34196.t1 AT2G46770 43.810 210 100 7 11 202 13 222 3.20e-50 171
MS.gene34196.t1 AT2G18060 42.051 195 105 3 7 197 2 192 3.83e-50 171
MS.gene34196.t1 AT2G18060 42.051 195 105 3 7 197 2 192 3.83e-50 171
MS.gene34196.t1 AT1G79580 51.899 158 67 3 11 164 14 166 5.40e-50 171
MS.gene34196.t1 AT1G79580 51.899 158 67 3 11 164 14 166 5.40e-50 171
MS.gene34196.t1 AT1G79580 51.899 158 67 3 11 164 14 166 5.40e-50 171
MS.gene34196.t1 AT1G79580 51.899 158 67 3 11 164 14 166 5.40e-50 171
MS.gene34196.t1 AT1G79580 51.899 158 67 3 11 164 14 166 5.40e-50 171
MS.gene34196.t1 AT1G76420 50.286 175 72 4 1 164 1 171 8.53e-50 169
MS.gene34196.t1 AT5G66300 47.879 165 76 3 13 174 11 168 2.41e-49 167
MS.gene34196.t1 AT3G61910 40.654 214 99 5 11 206 8 211 6.16e-49 167
MS.gene34196.t1 AT5G46590 55.128 156 64 4 14 165 6 159 6.51e-49 166
MS.gene34196.t1 AT5G62380 42.381 210 106 5 14 219 7 205 3.80e-48 165
MS.gene34196.t1 AT5G62380 42.381 210 106 5 14 219 7 205 3.80e-48 165
MS.gene34196.t1 AT3G10480 50.625 160 76 2 9 166 22 180 4.88e-48 167
MS.gene34196.t1 AT1G12260 45.509 167 84 2 14 177 7 169 5.76e-48 164
MS.gene34196.t1 AT1G32770 46.061 165 78 2 11 164 13 177 8.19e-48 164
MS.gene34196.t1 AT1G12260 45.509 167 84 2 14 177 7 169 9.27e-48 165
MS.gene34196.t1 AT1G32510 49.133 173 76 4 14 176 6 176 9.52e-48 162
MS.gene34196.t1 AT2G17040 42.152 223 103 7 16 223 8 219 1.32e-47 162
MS.gene34196.t1 AT3G10480 51.250 160 74 3 9 166 22 179 1.32e-47 166
MS.gene34196.t1 AT4G36160 49.032 155 72 2 13 164 9 159 2.75e-47 164
MS.gene34196.t1 AT4G36160 49.032 155 72 2 13 164 9 159 2.75e-47 164
MS.gene34196.t1 AT4G36160 49.032 155 72 2 13 164 13 163 2.79e-47 164
MS.gene34196.t1 AT1G62700 48.701 154 72 2 14 164 7 156 3.96e-47 164
MS.gene34196.t1 AT1G62700 48.701 154 72 2 14 164 7 156 3.96e-47 164
MS.gene34196.t1 AT3G10490 49.359 156 76 2 13 166 26 180 1.04e-46 158
MS.gene34196.t1 AT5G46590 58.779 131 51 2 14 141 6 136 1.46e-46 159
MS.gene34196.t1 AT1G33060 48.795 166 81 2 5 168 15 178 2.66e-46 166
MS.gene34196.t1 AT1G33060 48.795 166 81 2 5 168 15 178 2.91e-46 166
MS.gene34196.t1 AT5G24590 45.833 192 95 4 9 195 8 195 6.52e-46 162
MS.gene34196.t1 AT3G12910 48.634 183 76 5 16 183 23 202 6.53e-46 158
MS.gene34196.t1 AT3G10490 49.359 156 76 2 13 166 26 180 9.89e-46 161
MS.gene34196.t1 AT4G35580 50.617 162 68 3 9 164 4 159 1.26e-45 162
MS.gene34196.t1 AT4G35580 50.617 162 68 3 9 164 4 159 1.28e-45 162
MS.gene34196.t1 AT4G35580 50.633 158 74 2 9 164 4 159 1.81e-45 162
MS.gene34196.t1 AT5G04410 49.080 163 79 2 10 170 5 165 4.57e-45 162
MS.gene34196.t1 AT3G10500 49.091 165 76 3 10 170 5 165 5.62e-45 161
MS.gene34196.t1 AT1G34180 41.951 205 99 5 16 216 18 206 1.01e-44 159
MS.gene34196.t1 AT1G34180 41.951 205 99 5 16 216 18 206 7.41e-44 158
MS.gene34196.t1 AT1G34190 45.283 159 79 3 16 170 18 172 6.19e-43 155
MS.gene34196.t1 AT1G34180 40.183 219 95 6 16 216 18 218 8.91e-43 154
MS.gene34196.t1 AT3G10480 43.005 193 74 3 9 166 22 213 9.37e-43 155
MS.gene34196.t1 AT3G49530 49.375 160 74 4 9 164 8 164 1.28e-42 152
MS.gene34196.t1 AT2G27300 45.399 163 75 3 13 170 13 166 4.13e-42 149
MS.gene34196.t1 AT3G49530 49.375 160 74 4 9 164 8 164 4.52e-42 152
MS.gene34196.t1 AT1G34180 40.183 219 95 6 16 216 18 218 5.84e-42 153
MS.gene34196.t1 AT5G64060 44.025 159 85 2 9 165 1 157 7.82e-42 149
MS.gene34196.t1 AT4G28530 45.665 173 70 5 14 168 10 176 4.45e-41 147
MS.gene34196.t1 AT1G32870 50.943 159 74 2 14 170 10 166 1.19e-40 149
MS.gene34196.t1 AT1G32870 50.943 159 74 2 14 170 10 166 1.33e-40 149
MS.gene34196.t1 AT1G32870 50.943 159 74 2 14 170 46 202 3.19e-40 148
MS.gene34196.t1 AT3G44290 43.871 155 76 3 16 169 16 160 1.81e-39 139
MS.gene34196.t1 AT5G22290 39.796 196 98 6 16 200 23 209 6.35e-39 140
MS.gene34196.t1 AT3G44290 43.871 155 76 3 16 169 16 160 1.37e-38 140
MS.gene34196.t1 AT5G61430 57.895 114 47 1 63 176 2 114 2.59e-38 137
MS.gene34196.t1 AT5G09330 42.138 159 88 2 9 165 1 157 4.66e-38 141
MS.gene34196.t1 AT5G09330 42.138 159 88 2 9 165 1 157 4.66e-38 141
MS.gene34196.t1 AT5G09330 42.138 159 88 2 9 165 1 157 4.66e-38 141
MS.gene34196.t1 AT5G09330 42.138 159 88 2 9 165 1 157 4.66e-38 141
MS.gene34196.t1 AT5G09330 42.138 159 88 2 9 165 1 157 4.66e-38 141
MS.gene34196.t1 AT5G64530 40.678 177 73 5 12 171 1 162 1.43e-34 125
MS.gene34196.t1 AT3G12977 43.972 141 69 4 63 203 14 144 1.54e-34 126
MS.gene34196.t1 AT1G56010 53.774 106 46 2 63 166 2 106 2.40e-34 126
MS.gene34196.t1 AT2G33480 55.882 102 43 1 67 168 8 107 2.57e-32 120
MS.gene34196.t1 AT4G10350 55.102 98 42 1 67 164 18 113 4.44e-32 121
MS.gene34196.t1 AT3G44350 39.024 164 89 5 14 169 5 165 9.14e-32 119
MS.gene34196.t1 AT5G22380 33.990 203 110 6 17 209 8 196 2.40e-31 118
MS.gene34196.t1 AT5G64530 46.970 132 56 3 12 141 1 120 4.68e-31 115
MS.gene34196.t1 AT3G44350 41.304 138 71 4 14 143 5 140 1.71e-28 108
MS.gene34196.t1 AT5G04395 40.411 146 71 2 10 139 24 169 4.87e-28 108
MS.gene34196.t1 AT2G43000 43.609 133 64 3 76 199 2 132 7.53e-26 102
MS.gene34196.t1 AT3G04420 41.732 127 70 2 15 137 4 130 1.26e-25 104
MS.gene34196.t1 AT4G28530 35.673 171 53 4 14 168 10 139 2.30e-25 103
MS.gene34196.t1 AT3G04420 41.732 127 70 2 15 137 4 130 2.93e-25 104
MS.gene34196.t1 AT4G01550 30.453 243 137 8 17 241 7 235 9.13e-25 104
MS.gene34196.t1 AT4G27410 43.373 166 66 7 134 295 1 142 2.31e-23 95.1
MS.gene34196.t1 AT4G01520 40.909 132 71 4 15 139 5 136 2.47e-23 98.2
MS.gene34196.t1 AT4G01540 41.538 130 69 4 17 139 7 136 8.28e-23 98.6
MS.gene34196.t1 AT4G01540 36.196 163 84 6 17 169 7 159 9.81e-23 97.8
MS.gene34196.t1 AT4G01540 41.538 130 69 4 17 139 7 136 1.10e-22 98.2
MS.gene34196.t1 AT4G01540 41.538 130 69 4 17 139 7 136 1.15e-22 98.6
MS.gene34196.t1 AT1G02230 40.769 130 67 5 15 137 4 130 1.04e-21 94.7
MS.gene34196.t1 AT1G02220 37.692 130 74 3 12 137 1 127 8.17e-21 92.4
MS.gene34196.t1 AT5G50820 33.514 185 101 7 12 185 15 188 2.17e-20 87.8
MS.gene34196.t1 AT1G02250 33.721 172 98 5 12 176 1 163 5.82e-20 89.7
MS.gene34196.t1 AT3G10490 48.750 80 40 1 87 166 2 80 1.22e-19 88.6
MS.gene34196.t1 AT3G10490 48.750 80 40 1 87 166 2 80 1.22e-19 88.6
MS.gene34196.t1 AT3G56530 34.194 155 95 4 11 162 49 199 5.20e-19 86.7
MS.gene34196.t1 AT1G01010 33.125 160 86 6 17 164 6 156 4.59e-17 82.0
MS.gene34196.t1 AT5G14000 31.288 163 101 4 12 171 13 167 4.70e-17 79.0
MS.gene34196.t1 AT2G18060 37.383 107 62 2 92 197 2 104 7.46e-17 79.7
MS.gene34196.t1 AT5G14000 34.286 140 86 3 12 147 13 150 9.73e-17 76.6
MS.gene34196.t1 AT3G55210 31.707 164 90 5 14 162 11 167 1.00e-16 79.3
MS.gene34196.t1 AT5G22290 37.288 118 55 5 93 200 2 110 5.54e-14 70.9
MS.gene34196.t1 AT4G29230 30.921 152 80 4 12 139 45 195 1.25e-12 68.9
MS.gene34196.t1 AT3G04430 35.606 132 71 5 20 138 6 136 2.30e-12 65.5
MS.gene34196.t1 AT5G56620 33.974 156 73 8 12 139 41 194 4.32e-12 67.0
MS.gene34196.t1 AT5G56620 33.974 156 73 8 12 139 41 194 5.59e-12 66.6
MS.gene34196.t1 AT1G28470 31.944 144 79 6 13 139 76 217 8.93e-12 65.5
MS.gene34196.t1 AT4G28500 36.806 144 71 7 14 139 59 200 1.02e-11 65.1
MS.gene34196.t1 AT5G56620 33.974 156 73 8 12 139 41 194 1.13e-11 65.5

Find 93 sgRNAs with CRISPR-Local

Find 117 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCATTTGGGTTTGGGTATT+CGG 0.141255 8.4:+48373965 MS.gene34196:CDS
CTCTTCGTCAGTGGGGTTCT+TGG 0.206001 8.4:-48373853 None:intergenic
GAGTTGCTGGTTCTGGTTAC+TGG 0.209450 8.4:+48373180 MS.gene34196:CDS
TTGGGTGACCCATTTGGGTT+TGG 0.232329 8.4:+48373957 MS.gene34196:CDS
GGTGCAGGCAAGGCGAATTT+TGG 0.246467 8.4:+48373092 MS.gene34196:intron
TGGGTGACCCATTTGGGTTT+GGG 0.283899 8.4:+48373958 MS.gene34196:CDS
AGAACCATTGCTGCATTCTT+TGG 0.294749 8.4:-48373535 None:intergenic
TCGGGCTTGGGTGACCCATT+TGG 0.306880 8.4:+48373951 MS.gene34196:CDS
TTTGATCCTTGGGTTCTTCC+AGG 0.310994 8.4:+48372766 MS.gene34196:CDS
CGGGCTTGGGTGACCCATTT+GGG 0.318140 8.4:+48373952 MS.gene34196:CDS
CTTGTACAAGTTTGATCCTT+GGG 0.318790 8.4:+48372756 MS.gene34196:CDS
ATTGAATCCTCACCGGAGTT+TGG 0.319990 8.4:+48373732 MS.gene34196:CDS
CCAAACAGAGTTGCTGGTTC+TGG 0.323652 8.4:+48373173 MS.gene34196:CDS
CCATTTGGGTTTGGGTATTC+GGG 0.326537 8.4:+48373966 MS.gene34196:CDS
AAGTCAATTTCAGCAATAAT+TGG 0.338246 8.4:-48372736 None:intergenic
CGAAATGTTGGACTCGTTCC+TGG 0.353931 8.4:+48373584 MS.gene34196:CDS
CTGTTTGGTCTAGAACCATT+TGG 0.354289 8.4:-48373158 None:intergenic
AGCTTTGATCATCAATTTCC+AGG 0.354718 8.4:-48373602 None:intergenic
TTATGTTGATATAAACTAGA+AGG 0.363334 8.4:-48373912 None:intergenic
TATCTATGTCGTAAAGTTGC+AGG 0.400628 8.4:+48372697 MS.gene34196:CDS
CATTCTTTGGTTGAAAATGT+TGG 0.404347 8.4:-48373522 None:intergenic
TTTGGATATTTCCTGTCCCT+TGG 0.404470 8.4:-48373140 None:intergenic
ATTGTTGCAGCTTGATGATT+GGG 0.404580 8.4:+48373452 MS.gene34196:intron
TCTCCTCTTGCTGTAGCATT+CGG 0.405277 8.4:-48373650 None:intergenic
AAAGCGGAATGAGGACTAAC+CGG 0.407018 8.4:+48373880 MS.gene34196:CDS
CTTTGAACCTCTTCGTCAGT+GGG 0.407280 8.4:-48373861 None:intergenic
TCCTCACCGGAGTTTGGATT+AGG 0.414541 8.4:+48373738 MS.gene34196:CDS
CCCGAATACCCAAACCCAAA+TGG 0.416032 8.4:-48373966 None:intergenic
TATTGTTGCAGCTTGATGAT+TGG 0.417879 8.4:+48373451 MS.gene34196:intron
CGTGCCACCGTTTGGTAACA+TGG 0.418390 8.4:+48373815 MS.gene34196:CDS
CCAGAACCAGCAACTCTGTT+TGG 0.423168 8.4:-48373173 None:intergenic
TCTAGACCAAACAGAGTTGC+TGG 0.423965 8.4:+48373167 MS.gene34196:CDS
TGGATTAGGAAACCAGAGTC+AGG 0.444473 8.4:+48373752 MS.gene34196:CDS
ACTTGTACAAGTTTGATCCT+TGG 0.451700 8.4:+48372755 MS.gene34196:CDS
CTACAGCAAGAGGAGAAGTT+CGG 0.456841 8.4:+48373657 MS.gene34196:CDS
TACAGCAAGAGGAGAAGTTC+GGG 0.459516 8.4:+48373658 MS.gene34196:CDS
GTTCCTTCCGTGCCACCGTT+TGG 0.466910 8.4:+48373807 MS.gene34196:CDS
AACAAGAAGCTCTTCATCAG+TGG 0.469107 8.4:-48372671 None:intergenic
CCGAATACCCAAACCCAAAT+GGG 0.471769 8.4:-48373965 None:intergenic
GGGTTTCACAACATGGGTGC+TGG 0.473359 8.4:+48373678 MS.gene34196:CDS
ACAACTGAAGGTAGAAAAGT+TGG 0.474990 8.4:+48373230 MS.gene34196:CDS
TTCGCCTTCATCGTCGTCCC+AGG 0.477914 8.4:+48373557 MS.gene34196:CDS
TGTGAAAGAGGATCTCTCTC+TGG 0.490458 8.4:-48372616 None:intergenic
AACTAGAAGGGTCGGTGACC+CGG 0.495029 8.4:-48373899 None:intergenic
AGTCAGGGGATGCTGAATTA+CGG 0.495349 8.4:+48373768 MS.gene34196:CDS
GCTTCGCGAAAACACAATCT+TGG 0.501596 8.4:+48373341 MS.gene34196:CDS
GAAGTTCGGGTTTCACAACA+TGG 0.506769 8.4:+48373671 MS.gene34196:CDS
TATATTGGCAAAGCACCAAA+AGG 0.512258 8.4:+48373275 MS.gene34196:CDS
GGTAAACTCAACTGTGAAAG+AGG 0.512342 8.4:-48372628 None:intergenic
ATTTCTTCAGTCCAAGGGAC+AGG 0.517559 8.4:+48373129 MS.gene34196:CDS
AATTCAGCATCCCCTGACTC+TGG 0.524401 8.4:-48373764 None:intergenic
GACAAAATTATCACAACTGA+AGG 0.526909 8.4:+48373218 MS.gene34196:CDS
GCTTTGAACCTCTTCGTCAG+TGG 0.531257 8.4:-48373862 None:intergenic
AGTCCAACATTTCGTCCACC+TGG 0.531736 8.4:-48373575 None:intergenic
TCAACCAAAGAATGCAGCAA+TGG 0.536044 8.4:+48373531 MS.gene34196:CDS
GTGAGGATTCAATATCTGTC+GGG 0.549879 8.4:-48373722 None:intergenic
ATCAAAGCTTTGCATTGCCG+CGG 0.551128 8.4:+48373616 MS.gene34196:CDS
ACAAGAAGCTCTTCATCAGT+GGG 0.551403 8.4:-48372670 None:intergenic
GTCCCAGGTGGACGAAATGT+TGG 0.553604 8.4:+48373572 MS.gene34196:CDS
AAGAGGTTCAAAGCGGAATG+AGG 0.554588 8.4:+48373871 MS.gene34196:CDS
AATGGTATTTCTTCAGTCCA+AGG 0.554883 8.4:+48373123 MS.gene34196:CDS
GACAAGTCCATGTTACCAAA+CGG 0.557895 8.4:-48373822 None:intergenic
TTGATATAAACTAGAAGGGT+CGG 0.560325 8.4:-48373907 None:intergenic
TCCACCTGGGACGACGATGA+AGG 0.560826 8.4:-48373561 None:intergenic
GGTGAGGATTCAATATCTGT+CGG 0.563156 8.4:-48373723 None:intergenic
TATGTTGATATAAACTAGAA+GGG 0.564471 8.4:-48373911 None:intergenic
AAGCGGAATGAGGACTAACC+GGG 0.566841 8.4:+48373881 MS.gene34196:CDS
ACTCCGAATGCTACAGCAAG+AGG 0.568493 8.4:+48373647 MS.gene34196:CDS
TCAAAGCTTTGCATTGCCGC+GGG 0.571006 8.4:+48373617 MS.gene34196:CDS
TTACCAAACGGTGGCACGGA+AGG 0.576728 8.4:-48373810 None:intergenic
GGATTAGGAAACCAGAGTCA+GGG 0.583546 8.4:+48373753 MS.gene34196:CDS
CAAGAACCCCACTGACGAAG+AGG 0.586015 8.4:+48373854 MS.gene34196:CDS
ATGGTATTTCTTCAGTCCAA+GGG 0.588129 8.4:+48373124 MS.gene34196:CDS
AGGGACAGGAAATATCCAAA+TGG 0.592563 8.4:+48373143 MS.gene34196:CDS
TCTGGTTACTGGAAAGCCAC+AGG 0.607999 8.4:+48373191 MS.gene34196:CDS
GCCTTCATCGTCGTCCCAGG+TGG 0.609301 8.4:+48373560 MS.gene34196:CDS
CATGTTACCAAACGGTGGCA+CGG 0.615690 8.4:-48373814 None:intergenic
TGGTAACATGGACTTGTCAG+CGG 0.622784 8.4:+48373827 MS.gene34196:CDS
GTCCAACATTTCGTCCACCT+GGG 0.623948 8.4:-48373574 None:intergenic
TAATTACCTGGAAGAACCCA+AGG 0.624355 8.4:-48372772 None:intergenic
GACAGATATTGAATCCTCAC+CGG 0.626126 8.4:+48373725 MS.gene34196:CDS
GATTAGGAAACCAGAGTCAG+GGG 0.641898 8.4:+48373754 MS.gene34196:CDS
GTGGGGAAGAATCTGAAACC+AGG 0.652605 8.4:-48372652 None:intergenic
TTTGAACCTCTTCGTCAGTG+GGG 0.654075 8.4:-48373860 None:intergenic
TCACAGTTGAGTTTACCACC+TGG 0.654718 8.4:+48372634 MS.gene34196:CDS
TGGTTTCCTAATCCAAACTC+CGG 0.659176 8.4:-48373744 None:intergenic
TCCTAATCCAAACTCCGGTG+AGG 0.662436 8.4:-48373739 None:intergenic
AAGTTCGGGTTTCACAACAT+GGG 0.678618 8.4:+48373672 MS.gene34196:CDS
ATTCGGAGTGATGTTACCCG+CGG 0.710388 8.4:-48373633 None:intergenic
AAGTCCATGTTACCAAACGG+TGG 0.727825 8.4:-48373819 None:intergenic
CAAGAAGCTCTTCATCAGTG+GGG 0.738513 8.4:-48372669 None:intergenic
GGGAAGAATCTGAAACCAGG+TGG 0.741808 8.4:-48372649 None:intergenic
ACTGACGAAGAGGTTCAAAG+CGG 0.781762 8.4:+48373864 MS.gene34196:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATAATAATGTATTTTTATC+GGG + chr8.4:48373933-48373952 MS.gene34196:CDS 10.0%
!!! CAATTTTAATATTGTTGTTA+TGG + chr8.4:48373065-48373084 MS.gene34196:intron 15.0%
!! TATGTTGATATAAACTAGAA+GGG - chr8.4:48373914-48373933 None:intergenic 20.0%
!! TTATGTTGATATAAACTAGA+AGG - chr8.4:48373915-48373934 None:intergenic 20.0%
!!! TAATATTGTTGTTATGGTTT+TGG + chr8.4:48373071-48373090 MS.gene34196:intron 20.0%
! AAGTCAATTTCAGCAATAAT+TGG - chr8.4:48372739-48372758 None:intergenic 25.0%
! CAAAAGGAACAAAAACTAAT+TGG + chr8.4:48373291-48373310 MS.gene34196:CDS 25.0%
! CTGAAATTCTGACAATAATA+CGG + chr8.4:48372952-48372971 MS.gene34196:intron 25.0%
!!! AAAGCACTTGTTTTCTATAT+TGG + chr8.4:48373260-48373279 MS.gene34196:CDS 25.0%
!!! CAATTAGTTTTTGTTCCTTT+TGG - chr8.4:48373293-48373312 None:intergenic 25.0%
CAGGTAATTATCACCAATTT+AGG + chr8.4:48372785-48372804 MS.gene34196:intron 30.0%
CATTCTTTGGTTGAAAATGT+TGG - chr8.4:48373525-48373544 None:intergenic 30.0%
CTCATCAATAAAAATGAGCA+AGG - chr8.4:48373403-48373422 None:intergenic 30.0%
GACAAAATTATCACAACTGA+AGG + chr8.4:48373218-48373237 MS.gene34196:CDS 30.0%
TAACTATTGCAAAATCACAG+TGG - chr8.4:48372899-48372918 None:intergenic 30.0%
TTGATATAAACTAGAAGGGT+CGG - chr8.4:48373910-48373929 None:intergenic 30.0%
! CTAAATTGGTGATAATTACC+TGG - chr8.4:48372787-48372806 None:intergenic 30.0%
!! AATGTATTTTTATCGGGCTT+GGG + chr8.4:48373939-48373958 MS.gene34196:CDS 30.0%
!! TAATGTATTTTTATCGGGCT+TGG + chr8.4:48373938-48373957 MS.gene34196:CDS 30.0%
AATGGTATTTCTTCAGTCCA+AGG + chr8.4:48373123-48373142 MS.gene34196:CDS 35.0%
ACAACTGAAGGTAGAAAAGT+TGG + chr8.4:48373230-48373249 MS.gene34196:CDS 35.0%
ACTTGTACAAGTTTGATCCT+TGG + chr8.4:48372755-48372774 MS.gene34196:CDS 35.0%
ATGGTATTTCTTCAGTCCAA+GGG + chr8.4:48373124-48373143 MS.gene34196:CDS 35.0%
CTTGTACAAGTTTGATCCTT+GGG + chr8.4:48372756-48372775 MS.gene34196:CDS 35.0%
TATCTATGTCGTAAAGTTGC+AGG + chr8.4:48372697-48372716 MS.gene34196:CDS 35.0%
TCTGCAATTGCAACCTAAAT+TGG - chr8.4:48372801-48372820 None:intergenic 35.0%
! AGCTTTGATCATCAATTTCC+AGG - chr8.4:48373605-48373624 None:intergenic 35.0%
! ATTGTTGCAGCTTGATGATT+GGG + chr8.4:48373452-48373471 MS.gene34196:intron 35.0%
! GATAATTTTGTCTGTTCCTG+TGG - chr8.4:48373210-48373229 None:intergenic 35.0%
! TATATTGGCAAAGCACCAAA+AGG + chr8.4:48373275-48373294 MS.gene34196:CDS 35.0%
! TATTGTTGCAGCTTGATGAT+TGG + chr8.4:48373451-48373470 MS.gene34196:intron 35.0%
!! CGAATTTTGGTGAGAAAGAA+TGG + chr8.4:48373105-48373124 MS.gene34196:CDS 35.0%
AACAAGAAGCTCTTCATCAG+TGG - chr8.4:48372674-48372693 None:intergenic 40.0%
ACAAGAAGCTCTTCATCAGT+GGG - chr8.4:48372673-48372692 None:intergenic 40.0%
AGAACCATTGCTGCATTCTT+TGG - chr8.4:48373538-48373557 None:intergenic 40.0%
AGGGACAGGAAATATCCAAA+TGG + chr8.4:48373143-48373162 MS.gene34196:CDS 40.0%
CCGTAAGTTTGTCAGAATCA+CGG + chr8.4:48372869-48372888 MS.gene34196:intron 40.0%
CCGTGATTCTGACAAACTTA+CGG - chr8.4:48372872-48372891 None:intergenic 40.0%
GAAAAACTCAAGCTCGCAAA+AGG + chr8.4:48373494-48373513 MS.gene34196:CDS 40.0%
GACAAGTCCATGTTACCAAA+CGG - chr8.4:48373825-48373844 None:intergenic 40.0%
GACAGATATTGAATCCTCAC+CGG + chr8.4:48373725-48373744 MS.gene34196:CDS 40.0%
GGTAAACTCAACTGTGAAAG+AGG - chr8.4:48372631-48372650 None:intergenic 40.0%
GGTGAGGATTCAATATCTGT+CGG - chr8.4:48373726-48373745 None:intergenic 40.0%
GTGAGGATTCAATATCTGTC+GGG - chr8.4:48373725-48373744 None:intergenic 40.0%
TAATTACCTGGAAGAACCCA+AGG - chr8.4:48372775-48372794 None:intergenic 40.0%
TCAACCAAAGAATGCAGCAA+TGG + chr8.4:48373531-48373550 MS.gene34196:CDS 40.0%
TGGTTTCCTAATCCAAACTC+CGG - chr8.4:48373747-48373766 None:intergenic 40.0%
TTTGGATATTTCCTGTCCCT+TGG - chr8.4:48373143-48373162 None:intergenic 40.0%
! AAGTTCGGGTTTCACAACAT+GGG + chr8.4:48373672-48373691 MS.gene34196:CDS 40.0%
! CTGTTTGGTCTAGAACCATT+TGG - chr8.4:48373161-48373180 None:intergenic 40.0%
! TGCTGGACTTTTCTCTGATT+GGG + chr8.4:48373695-48373714 MS.gene34196:CDS 40.0%
!!! TGTTGTTATGGTTTTGGTGC+AGG + chr8.4:48373077-48373096 MS.gene34196:intron 40.0%
AAAGCGGAATGAGGACTAAC+CGG + chr8.4:48373880-48373899 MS.gene34196:CDS 45.0%
AAGAGGTTCAAAGCGGAATG+AGG + chr8.4:48373871-48373890 MS.gene34196:CDS 45.0%
AAGTCCATGTTACCAAACGG+TGG - chr8.4:48373822-48373841 None:intergenic 45.0%
ACTGACGAAGAGGTTCAAAG+CGG + chr8.4:48373864-48373883 MS.gene34196:CDS 45.0%
AGTCAGGGGATGCTGAATTA+CGG + chr8.4:48373768-48373787 MS.gene34196:CDS 45.0%
ATCAAAGCTTTGCATTGCCG+CGG + chr8.4:48373616-48373635 MS.gene34196:CDS 45.0%
ATTGAATCCTCACCGGAGTT+TGG + chr8.4:48373732-48373751 MS.gene34196:CDS 45.0%
ATTTCTTCAGTCCAAGGGAC+AGG + chr8.4:48373129-48373148 MS.gene34196:CDS 45.0%
CAAGAAGCTCTTCATCAGTG+GGG - chr8.4:48372672-48372691 None:intergenic 45.0%
CCGAATACCCAAACCCAAAT+GGG - chr8.4:48373968-48373987 None:intergenic 45.0%
CTACAGCAAGAGGAGAAGTT+CGG + chr8.4:48373657-48373676 MS.gene34196:CDS 45.0%
CTTTGAACCTCTTCGTCAGT+GGG - chr8.4:48373864-48373883 None:intergenic 45.0%
GATTAGGAAACCAGAGTCAG+GGG + chr8.4:48373754-48373773 MS.gene34196:CDS 45.0%
GCTTCGCGAAAACACAATCT+TGG + chr8.4:48373341-48373360 MS.gene34196:CDS 45.0%
GGATTAGGAAACCAGAGTCA+GGG + chr8.4:48373753-48373772 MS.gene34196:CDS 45.0%
TACAGCAAGAGGAGAAGTTC+GGG + chr8.4:48373658-48373677 MS.gene34196:CDS 45.0%
TCACAGTTGAGTTTACCACC+TGG + chr8.4:48372634-48372653 MS.gene34196:CDS 45.0%
TCTAGACCAAACAGAGTTGC+TGG + chr8.4:48373167-48373186 MS.gene34196:CDS 45.0%
TGGTAACATGGACTTGTCAG+CGG + chr8.4:48373827-48373846 MS.gene34196:CDS 45.0%
TGTGAAAGAGGATCTCTCTC+TGG - chr8.4:48372619-48372638 None:intergenic 45.0%
TTTGAACCTCTTCGTCAGTG+GGG - chr8.4:48373863-48373882 None:intergenic 45.0%
TTTGATCCTTGGGTTCTTCC+AGG + chr8.4:48372766-48372785 MS.gene34196:CDS 45.0%
! CCATTTGGGTTTGGGTATTC+GGG + chr8.4:48373966-48373985 MS.gene34196:CDS 45.0%
! CCCATTTGGGTTTGGGTATT+CGG + chr8.4:48373965-48373984 MS.gene34196:CDS 45.0%
! GAAGTTCGGGTTTCACAACA+TGG + chr8.4:48373671-48373690 MS.gene34196:CDS 45.0%
! GTGCTGGACTTTTCTCTGAT+TGG + chr8.4:48373694-48373713 MS.gene34196:CDS 45.0%
! TCTCCTCTTGCTGTAGCATT+CGG - chr8.4:48373653-48373672 None:intergenic 45.0%
! TGGATTAGGAAACCAGAGTC+AGG + chr8.4:48373752-48373771 MS.gene34196:CDS 45.0%
!!! TTATGGTTTTGGTGCAGGCA+AGG + chr8.4:48373082-48373101 MS.gene34196:intron 45.0%
!!! TAATAATAATGTATTTTTAT+CGG + chr8.4:48373932-48373951 MS.gene34196:CDS 5.0%
AAGCGGAATGAGGACTAACC+GGG + chr8.4:48373881-48373900 MS.gene34196:CDS 50.0%
AATTCAGCATCCCCTGACTC+TGG - chr8.4:48373767-48373786 None:intergenic 50.0%
ACTCCGAATGCTACAGCAAG+AGG + chr8.4:48373647-48373666 MS.gene34196:CDS 50.0%
AGTCCAACATTTCGTCCACC+TGG - chr8.4:48373578-48373597 None:intergenic 50.0%
ATTCGGAGTGATGTTACCCG+CGG - chr8.4:48373636-48373655 None:intergenic 50.0%
CATGTTACCAAACGGTGGCA+CGG - chr8.4:48373817-48373836 None:intergenic 50.0%
CCAGAACCAGCAACTCTGTT+TGG - chr8.4:48373176-48373195 None:intergenic 50.0%
CCCGAATACCCAAACCCAAA+TGG - chr8.4:48373969-48373988 None:intergenic 50.0%
CGAAATGTTGGACTCGTTCC+TGG + chr8.4:48373584-48373603 MS.gene34196:CDS 50.0%
GTCCAACATTTCGTCCACCT+GGG - chr8.4:48373577-48373596 None:intergenic 50.0%
TCAAAGCTTTGCATTGCCGC+GGG + chr8.4:48373617-48373636 MS.gene34196:CDS 50.0%
TCCTAATCCAAACTCCGGTG+AGG - chr8.4:48373742-48373761 None:intergenic 50.0%
TCCTCACCGGAGTTTGGATT+AGG + chr8.4:48373738-48373757 MS.gene34196:CDS 50.0%
TCTGGTTACTGGAAAGCCAC+AGG + chr8.4:48373191-48373210 MS.gene34196:CDS 50.0%
! GCTTTGAACCTCTTCGTCAG+TGG - chr8.4:48373865-48373884 None:intergenic 50.0%
! GGGAAGAATCTGAAACCAGG+TGG - chr8.4:48372652-48372671 None:intergenic 50.0%
! GTGGGGAAGAATCTGAAACC+AGG - chr8.4:48372655-48372674 None:intergenic 50.0%
! TGGGTGACCCATTTGGGTTT+GGG + chr8.4:48373958-48373977 MS.gene34196:CDS 50.0%
! TTGGGTGACCCATTTGGGTT+TGG + chr8.4:48373957-48373976 MS.gene34196:CDS 50.0%
!! CCAAACAGAGTTGCTGGTTC+TGG + chr8.4:48373173-48373192 MS.gene34196:CDS 50.0%
!! GAGTTGCTGGTTCTGGTTAC+TGG + chr8.4:48373180-48373199 MS.gene34196:CDS 50.0%
AACTAGAAGGGTCGGTGACC+CGG - chr8.4:48373902-48373921 None:intergenic 55.0%
CAAGAACCCCACTGACGAAG+AGG + chr8.4:48373854-48373873 MS.gene34196:CDS 55.0%
CTCTTCGTCAGTGGGGTTCT+TGG - chr8.4:48373856-48373875 None:intergenic 55.0%
GGGTTTCACAACATGGGTGC+TGG + chr8.4:48373678-48373697 MS.gene34196:CDS 55.0%
GTCCCAGGTGGACGAAATGT+TGG + chr8.4:48373572-48373591 MS.gene34196:CDS 55.0%
TTACCAAACGGTGGCACGGA+AGG - chr8.4:48373813-48373832 None:intergenic 55.0%
! CGTGCCACCGTTTGGTAACA+TGG + chr8.4:48373815-48373834 MS.gene34196:CDS 55.0%
! GGTGCAGGCAAGGCGAATTT+TGG + chr8.4:48373092-48373111 MS.gene34196:intron 55.0%
CGGGCTTGGGTGACCCATTT+GGG + chr8.4:48373952-48373971 MS.gene34196:CDS 60.0%
GTTCCTTCCGTGCCACCGTT+TGG + chr8.4:48373807-48373826 MS.gene34196:CDS 60.0%
TCCACCTGGGACGACGATGA+AGG - chr8.4:48373564-48373583 None:intergenic 60.0%
TCGGGCTTGGGTGACCCATT+TGG + chr8.4:48373951-48373970 MS.gene34196:CDS 60.0%
TTCGCCTTCATCGTCGTCCC+AGG + chr8.4:48373557-48373576 MS.gene34196:CDS 60.0%
GCCTTCATCGTCGTCCCAGG+TGG + chr8.4:48373560-48373579 MS.gene34196:CDS 65.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 48372607 48373995 48372607 ID=MS.gene34196
chr8.4 mRNA 48372607 48373995 48372607 ID=MS.gene34196.t1;Parent=MS.gene34196
chr8.4 exon 48372607 48372787 48372607 ID=MS.gene34196.t1.exon1;Parent=MS.gene34196.t1
chr8.4 CDS 48372607 48372787 48372607 ID=cds.MS.gene34196.t1;Parent=MS.gene34196.t1
chr8.4 exon 48373099 48373373 48373099 ID=MS.gene34196.t1.exon2;Parent=MS.gene34196.t1
chr8.4 CDS 48373099 48373373 48373099 ID=cds.MS.gene34196.t1;Parent=MS.gene34196.t1
chr8.4 exon 48373462 48373995 48373462 ID=MS.gene34196.t1.exon3;Parent=MS.gene34196.t1
chr8.4 CDS 48373462 48373995 48373462 ID=cds.MS.gene34196.t1;Parent=MS.gene34196.t1
Gene Sequence

>MS.gene34196

ATGGGAGTTCCAGAGAGAGATCCTCTTTCACAGTTGAGTTTACCACCTGGTTTCAGATTCTTCCCCACTGATGAAGAGCTTCTTGTTCAGTATCTATGTCGTAAAGTTGCAGGACATCATTTTTCTTTGCCAATTATTGCTGAAATTGACTTGTACAAGTTTGATCCTTGGGTTCTTCCAGGTAATTATCACCAATTTAGGTTGCAATTGCAGAATTGTCATGTCTTTAAATTTTAAAATATTAAATGTATGTTTGATATTACCGTAAGTTTGTCAGAATCACGGTGAACCACTGTGATTTTGCAATAGTTACACTTTCAAGCTTGTAACTTTTGAAAGATCACACTGAAATTCTGACAATAATACGGTAATATGAAACATGCACTAAAATCACAACTATGTTAATACTGTTGCTAAATATTTTGTGTTGTTTATATTTAATTTGTTTAATTGAGATGCAATTTTAATATTGTTGTTATGGTTTTGGTGCAGGCAAGGCGAATTTTGGTGAGAAAGAATGGTATTTCTTCAGTCCAAGGGACAGGAAATATCCAAATGGTTCTAGACCAAACAGAGTTGCTGGTTCTGGTTACTGGAAAGCCACAGGAACAGACAAAATTATCACAACTGAAGGTAGAAAAGTTGGCATAAAAAAAGCACTTGTTTTCTATATTGGCAAAGCACCAAAAGGAACAAAAACTAATTGGATTATGCATGAGTATCGTCTTCTTGATGCTTCGCGAAAACACAATCTTGGTAGCACAAAAGTAAGCAACACAATCGTATTATATTTCCTTGCTCATTTTTATTGATGAGAAAAGTAAAGAATCTAACTTATTTGATTTATTGTTGCAGCTTGATGATTGGGTTTTGTGTCGAATATACAAGAAAAACTCAAGCTCGCAAAAGGAAATTCCAACATTTTCAACCAAAGAATGCAGCAATGGTTCTTCGCCTTCATCGTCGTCCCAGGTGGACGAAATGTTGGACTCGTTCCTGGAAATTGATGATCAAAGCTTTGCATTGCCGCGGGTAACATCACTCCGAATGCTACAGCAAGAGGAGAAGTTCGGGTTTCACAACATGGGTGCTGGACTTTTCTCTGATTGGGTTAACCCGACAGATATTGAATCCTCACCGGAGTTTGGATTAGGAAACCAGAGTCAGGGGATGCTGAATTACGGTTGTAATGACTATTGTGTTCCTTCCGTGCCACCGTTTGGTAACATGGACTTGTCAGCGGAGTCCAAGAACCCCACTGACGAAGAGGTTCAAAGCGGAATGAGGACTAACCGGGTCACCGACCCTTCTAGTTTATATCAACATAATAATAATGTATTTTTATCGGGCTTGGGTGACCCATTTGGGTTTGGGTATTCGGGTCATTAA
Protein sequence

>MS.gene34196.t1

MGVPERDPLSQLSLPPGFRFFPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPWVLPGKANFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRLLDASRKHNLGSTKLDDWVLCRIYKKNSSSQKEIPTFSTKECSNGSSPSSSSQVDEMLDSFLEIDDQSFALPRVTSLRMLQQEEKFGFHNMGAGLFSDWVNPTDIESSPEFGLGNQSQGMLNYGCNDYCVPSVPPFGNMDLSAESKNPTDEEVQSGMRTNRVTDPSSLYQHNNNVFLSGLGDPFGFGYSGH