AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene34245

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34245.t1 MTR_8g463270 99.258 809 6 0 1 809 1 809 0.0 1665
MS.gene34245.t1 MTR_4g094300 30.590 559 350 13 27 564 21 562 5.54e-63 226
MS.gene34245.t1 MTR_7g451010 27.052 329 217 6 46 372 40 347 8.84e-20 94.7
MS.gene34245.t1 MTR_8g099550 26.627 338 216 6 31 356 9 326 1.32e-18 90.9
MS.gene34245.t1 MTR_8g009510 32.632 190 115 4 46 231 40 220 1.72e-18 90.5
MS.gene34245.t1 MTR_5g009150 31.963 219 119 6 31 231 9 215 6.39e-18 88.6
MS.gene34245.t1 MTR_8g027675 30.698 215 133 4 27 231 5 213 1.62e-17 87.4
MS.gene34245.t1 MTR_1g032550 30.622 209 132 4 31 231 12 215 2.10e-17 87.0
MS.gene34245.t1 MTR_8g105580 25.698 358 222 9 31 372 12 341 2.19e-17 87.0
MS.gene34245.t1 MTR_8g105580 25.698 358 222 9 31 372 12 341 3.01e-17 86.7
MS.gene34245.t1 MTR_4g098920 29.858 211 133 3 31 231 9 214 1.15e-16 84.7
MS.gene34245.t1 MTR_8g087770 29.555 247 155 8 11 253 37 268 1.04e-15 82.0
MS.gene34245.t1 MTR_4g093750 29.358 218 137 4 21 231 10 217 9.21e-15 79.0
MS.gene34245.t1 MTR_4g093750 30.288 208 128 4 31 231 20 217 9.46e-15 79.0
MS.gene34245.t1 MTR_8g087750 28.516 256 160 9 11 257 40 281 6.04e-14 76.3
MS.gene34245.t1 MTR_2g009690 29.187 209 129 4 31 231 29 226 2.51e-13 74.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene34245.t1 AT1G53140 75.883 821 170 8 5 809 9 817 0.0 1247
MS.gene34245.t1 AT3G19720 31.083 563 346 14 25 564 27 570 4.38e-61 220
MS.gene34245.t1 AT3G19720 31.083 563 346 14 25 564 27 570 6.59e-61 220
MS.gene34245.t1 AT3G19720 29.766 598 344 16 25 564 27 606 1.32e-55 205
MS.gene34245.t1 AT3G60190 32.796 186 120 2 46 231 40 220 9.60e-20 94.7
MS.gene34245.t1 AT1G60530 28.736 261 159 7 1 253 21 262 1.24e-19 90.9
MS.gene34245.t1 AT3G61760 27.083 336 217 9 31 356 9 326 1.06e-18 90.5
MS.gene34245.t1 AT3G61760 27.083 336 217 9 31 356 9 326 1.35e-18 90.9
MS.gene34245.t1 AT3G61760 27.083 336 217 9 31 356 9 326 1.94e-18 90.5
MS.gene34245.t1 AT1G14830 26.722 363 227 11 24 372 5 342 2.87e-18 90.1
MS.gene34245.t1 AT2G44590 31.183 186 123 2 46 231 35 215 8.34e-18 88.6
MS.gene34245.t1 AT1G60500 29.918 244 153 6 12 253 38 265 5.00e-17 86.3
MS.gene34245.t1 AT5G42080 30.045 223 140 4 31 243 9 225 7.43e-17 84.3
MS.gene34245.t1 AT5G42080 30.332 211 132 3 31 231 9 214 1.33e-16 84.7
MS.gene34245.t1 AT5G42080 30.332 211 132 3 31 231 9 214 1.35e-16 84.7
MS.gene34245.t1 AT5G42080 30.332 211 132 3 31 231 9 214 1.35e-16 84.7
MS.gene34245.t1 AT4G33650 29.091 220 140 4 21 231 32 244 4.02e-14 77.0
MS.gene34245.t1 AT4G33650 29.091 220 140 4 21 231 32 244 4.19e-14 77.0
MS.gene34245.t1 AT2G14120 29.694 229 142 6 14 231 9 229 9.27e-13 72.8
MS.gene34245.t1 AT2G14120 29.694 229 142 6 14 231 9 229 1.02e-12 72.4
MS.gene34245.t1 AT2G14120 29.694 229 142 6 14 231 9 229 1.11e-12 72.4
MS.gene34245.t1 AT2G14120 29.694 229 142 6 14 231 9 229 1.40e-12 72.0
MS.gene34245.t1 AT2G44590 26.882 186 114 3 46 231 35 198 4.49e-11 67.0
MS.gene34245.t1 AT2G44590 26.882 186 114 3 46 231 35 198 4.76e-11 66.6

Find 219 sgRNAs with CRISPR-Local

Find 382 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCAACGGCAACAATTTC+AGG 0.151688 8.4:-47228050 None:intergenic
GAGGTCACTTGTGAACTTTC+TGG 0.154101 8.4:+47229566 MS.gene34245:CDS
AATGCCACTCTTCGTCTTTA+TGG 0.169993 8.4:+47229927 MS.gene34245:CDS
TTCAAATCCTATATTGGTTT+TGG 0.172613 8.4:+47229452 MS.gene34245:CDS
CTCCCCATTTCCAAATAAAA+TGG 0.180476 8.4:-47231371 None:intergenic
CTTGAGACGATTATCAAATT+TGG 0.197072 8.4:-47228837 None:intergenic
GGATGTGGATGGGGTCTTTG+TGG 0.207238 8.4:-47227931 None:intergenic
TGCTTACACTCGATTCTTAA+AGG 0.220715 8.4:+47230889 MS.gene34245:CDS
ATTCTAGACGCTCTCTTTCT+TGG 0.228334 8.4:-47231301 None:intergenic
TGAACCTCGTTGCCGCTTCC+AGG 0.270752 8.4:+47228196 MS.gene34245:CDS
GAAAAGTTCAAATCCTATAT+TGG 0.285422 8.4:+47229446 MS.gene34245:CDS
TTTAGGAAGCTTATTTGATT+TGG 0.292118 8.4:+47230285 MS.gene34245:CDS
CTCAAAGTGGCATTGGGATT+TGG 0.294675 8.4:+47229874 MS.gene34245:CDS
CACGTATACGTGCGAAATGC+TGG 0.302416 8.4:-47231435 None:intergenic
TGGGCGTCTGAGGGATTATT+TGG 0.304702 8.4:+47229472 MS.gene34245:CDS
CAAGCCGCTGCTGTCGCTTT+CGG 0.324910 8.4:+47228011 MS.gene34245:CDS
CTTAGGAGAAACTGCTGTTT+TGG 0.332944 8.4:-47228464 None:intergenic
TGATCAGGAGATGGGGTCTC+AGG 0.345824 8.4:-47231217 None:intergenic
CATCAGGGTGCCTTGATTGA+TGG 0.346683 8.4:+47229798 MS.gene34245:intron
AAGTAGCAGACCTGTGAGTA+TGG 0.356134 8.4:-47230968 None:intergenic
GATCGCCTTGTTGTGGCTCT+CGG 0.357701 8.4:+47232138 MS.gene34245:CDS
TGGGGTCTTTGTGGGAGTGG+TGG 0.361834 8.4:-47227922 None:intergenic
GGTCTTTGTGGGAGTGGTGG+TGG 0.363072 8.4:-47227919 None:intergenic
AATCGGGGTGCTTTCTTGAC+CGG 0.367025 8.4:-47227956 None:intergenic
CTTGACCGGGTGGATGTGGA+TGG 0.367812 8.4:-47227942 None:intergenic
GTAAGCTTCGAAGCGAGATT+TGG 0.370913 8.4:-47227979 None:intergenic
GTATGGAAGTCCGGTGGTTT+CGG 0.371097 8.4:+47228387 MS.gene34245:CDS
GATGTGGATGGGGTCTTTGT+GGG 0.379532 8.4:-47227930 None:intergenic
CAGCCAGGTGATCCTGTATA+TGG 0.379808 8.4:+47231238 MS.gene34245:CDS
ACAGGATCACCTGGCTGATC+AGG 0.382456 8.4:-47231232 None:intergenic
GAGGAAGATTCAGAAGAGTA+TGG 0.382821 8.4:+47228370 MS.gene34245:CDS
CACTTGTGAACTTTCTGGAT+TGG 0.394884 8.4:+47229571 MS.gene34245:CDS
TTGACCGGGTGGATGTGGAT+GGG 0.404185 8.4:-47227941 None:intergenic
TCGAAGCGAGATTTGGAATC+GGG 0.405251 8.4:-47227972 None:intergenic
AAACCCCGGTGTGTCAATAA+TGG 0.405689 8.4:-47228530 None:intergenic
TTGCCCATGCTGGCCGAGGT+GGG 0.406137 8.4:+47230161 MS.gene34245:CDS
TGAACTCATTCAAGCAAGAA+TGG 0.407252 8.4:-47232275 None:intergenic
CAGACGCCCAAAACCAATAT+AGG 0.409317 8.4:-47229459 None:intergenic
TGCCCATGCTGGCCGAGGTG+GGG 0.410115 8.4:+47230162 MS.gene34245:CDS
CCTTGTTGTGGCTCTCGGGT+TGG 0.414030 8.4:+47232143 MS.gene34245:CDS
TGGAATGGTGCTCCTCTTTG+TGG 0.415237 8.4:+47228759 MS.gene34245:CDS
TATTCAGCTTTGAGTACAAT+TGG 0.418369 8.4:-47228487 None:intergenic
GCCCATGCTGGCCGAGGTGG+GGG 0.421052 8.4:+47230163 MS.gene34245:CDS
TTTGGAAATGGGGAGAGAAC+AGG 0.425343 8.4:+47231379 MS.gene34245:CDS
CGAACGTGTGCTGCTTTACC+TGG 0.428192 8.4:-47231163 None:intergenic
GCGTCTAGAATGACAGGAAA+TGG 0.428588 8.4:+47231313 MS.gene34245:CDS
GGGTCTCAGGGATAGTCATC+TGG 0.431491 8.4:-47231204 None:intergenic
TTTCTATGCCCTCCATATAC+AGG 0.431806 8.4:-47231250 None:intergenic
GCTGAAGGAACAAGAGTATA+CGG 0.438622 8.4:-47228727 None:intergenic
GGGAGTGGTGGTGGATGACA+TGG 0.438859 8.4:-47227910 None:intergenic
GGTTATCTTCAATAGTGCTT+CGG 0.440026 8.4:-47228443 None:intergenic
ATCGGGGTGCTTTCTTGACC+GGG 0.442334 8.4:-47227955 None:intergenic
GCTTTGAGTACAATTGGCTT+AGG 0.447637 8.4:-47228481 None:intergenic
TAGAAGCTTACCAAGGAGTC+AGG 0.448083 8.4:-47231504 None:intergenic
ATGGTGCTCCTCTTTGTGGT+TGG 0.449775 8.4:+47228763 MS.gene34245:CDS
AAGAGAGCGTCTAGAATGAC+AGG 0.452216 8.4:+47231307 MS.gene34245:CDS
ATCGCCTTGTTGTGGCTCTC+GGG 0.455328 8.4:+47232139 MS.gene34245:CDS
ATGGACATGTTTGTCGCTCC+TGG 0.456326 8.4:+47232195 MS.gene34245:CDS
ATCTCATCAGGCGTGTTCTC+CGG 0.457464 8.4:-47228668 None:intergenic
TAAAGACGAAGAGTGGCATT+GGG 0.457812 8.4:-47229924 None:intergenic
CCTGAAATTGTTGCCGTTGG+TGG 0.458140 8.4:+47228050 MS.gene34245:CDS
CTTGCCCATGCTGGCCGAGG+TGG 0.459436 8.4:+47230160 MS.gene34245:CDS
GGATGGGGTCTTTGTGGGAG+TGG 0.462001 8.4:-47227925 None:intergenic
TGAAGCATTTGAAGAATAAG+AGG 0.464570 8.4:-47228158 None:intergenic
CGTGAAGTTCTTGTTGAAAG+AGG 0.465409 8.4:+47231454 MS.gene34245:CDS
CGAAAGCGACAGCAGCGGCT+TGG 0.466451 8.4:-47228010 None:intergenic
GAAATGTTGCCTCTATCCTT+AGG 0.466550 8.4:-47229335 None:intergenic
CTTTCTTGACCGGGTGGATG+TGG 0.468168 8.4:-47227946 None:intergenic
TGACCGGGTGGATGTGGATG+GGG 0.468953 8.4:-47227940 None:intergenic
GTGGCTCTGCCTAAGGATAG+AGG 0.469322 8.4:+47229326 MS.gene34245:CDS
TCAAGCAAGGCAAGAGTTGA+TGG 0.470376 8.4:-47229530 None:intergenic
AATATATTGCTTGCCCATGC+TGG 0.470464 8.4:+47230151 MS.gene34245:CDS
GAGCGGTCTCAAAGTGGCAT+TGG 0.471095 8.4:+47229867 MS.gene34245:CDS
GTGTCAATAATGGTGAGATT+TGG 0.471209 8.4:-47228520 None:intergenic
TTTCCCCACTGCTCAGGGGA+AGG 0.472652 8.4:-47229831 None:intergenic
CGACAGCAGCGGCTTGGAGG+CGG 0.476508 8.4:-47228004 None:intergenic
AGCAGTGCAAGCAGCTTGTT+AGG 0.478959 8.4:+47230921 MS.gene34245:CDS
GGGAGCTCTTTCCATCAGAT+TGG 0.479145 8.4:-47228073 None:intergenic
AGCGGTCTCAAAGTGGCATT+GGG 0.479457 8.4:+47229868 MS.gene34245:CDS
ACTCTGGATTCCTGACTCCT+TGG 0.488697 8.4:+47231494 MS.gene34245:CDS
AAGCGACAGCAGCGGCTTGG+AGG 0.490506 8.4:-47228007 None:intergenic
AAATGAAGAGGCTGAAGCCT+GGG 0.492594 8.4:-47231044 None:intergenic
ATTCTGCTTCTCATGATGTA+AGG 0.492714 8.4:+47231089 MS.gene34245:CDS
CCACTCTTCGTCTTTATGGA+GGG 0.493817 8.4:+47229931 MS.gene34245:CDS
CACACCGGGGTTTGTTCTCA+AGG 0.496399 8.4:+47228540 MS.gene34245:CDS
TTGAGTGCAAGTGGTTACCT+TGG 0.496456 8.4:+47229281 MS.gene34245:CDS
AAAATGAAGAGGCTGAAGCC+TGG 0.498478 8.4:-47231045 None:intergenic
TTCAGAAGAGTATGGAAGTC+CGG 0.500297 8.4:+47228378 MS.gene34245:CDS
TTCGAAGCGAGATTTGGAAT+CGG 0.502350 8.4:-47227973 None:intergenic
GCAGATCTCTCATGTGGACT+CGG 0.503415 8.4:+47229376 MS.gene34245:CDS
CAATGTCCGTGAAGTTGAGA+TGG 0.505101 8.4:+47228124 MS.gene34245:CDS
TCCCTTCTCGAAGCACTCCT+CGG 0.506447 8.4:+47228092 MS.gene34245:CDS
CACTCTTCGTCTTTATGGAG+GGG 0.509742 8.4:+47229932 MS.gene34245:CDS
ATGGAGGGGCTGCATTTGAG+AGG 0.509770 8.4:+47229946 MS.gene34245:CDS
TGTGAACGATGAGAAATTCA+TGG 0.512127 8.4:+47232176 MS.gene34245:CDS
ATCTGCTGCACCATCAATCA+AGG 0.512415 8.4:-47229808 None:intergenic
AGTGGCATTGGGATTTGGCC+TGG 0.512652 8.4:+47229879 MS.gene34245:CDS
CTCACCATTATTGACACACC+GGG 0.513588 8.4:+47228526 MS.gene34245:CDS
TTTGTATGGTAGGCGAAGAA+GGG 0.513608 8.4:+47228641 MS.gene34245:intron
ACGTATACGTGCGAAATGCT+GGG 0.513649 8.4:-47231434 None:intergenic
GCCACTCTTCGTCTTTATGG+AGG 0.514353 8.4:+47229930 MS.gene34245:CDS
ATCTAGTAACTCTAATCAAA+GGG 0.514624 8.4:-47232313 None:intergenic
CACCTGGCTGATCAGGAGAT+GGG 0.515425 8.4:-47231225 None:intergenic
ATTTACTGATCGGTGGGAAG+TGG 0.515582 8.4:+47229250 MS.gene34245:CDS
AAATTGATCCCACGTTTAGA+CGG 0.515819 8.4:+47228798 MS.gene34245:CDS
GAAACTTGAAGCGTTTATGC+CGG 0.520142 8.4:-47231011 None:intergenic
TCATCTTCGCGACGGTGTCA+AGG 0.520175 8.4:+47229409 MS.gene34245:CDS
GTAGGCGAAGAAGGGTGAAC+CGG 0.523086 8.4:+47228649 MS.gene34245:intron
TCACCTGGCTGATCAGGAGA+TGG 0.523556 8.4:-47231226 None:intergenic
ATAAAGACGAAGAGTGGCAT+TGG 0.529100 8.4:-47229925 None:intergenic
CACCAACGGCAACAATTTCA+GGG 0.530283 8.4:-47228049 None:intergenic
ATCCCTGAAATTGTTGCCGT+TGG 0.530967 8.4:+47228047 MS.gene34245:CDS
GGAAACATGGATGGCTATGT+AGG 0.531101 8.4:+47230845 MS.gene34245:CDS
ACCATGGAAAGAATCTCATC+AGG 0.532315 8.4:-47228680 None:intergenic
CTCTTGCCTTGCTTGAGCAA+AGG 0.532479 8.4:+47229537 MS.gene34245:CDS
TCCATCAGATTGGCCACCAA+CGG 0.533133 8.4:-47228063 None:intergenic
GCCTGATGAGATTCTTTCCA+TGG 0.536247 8.4:+47228679 MS.gene34245:CDS
AGCTCCAGAAAAGAATGCAC+TGG 0.536287 8.4:+47231129 MS.gene34245:CDS
TCTTTCCATGGTGAAGACAT+TGG 0.538252 8.4:+47228691 MS.gene34245:CDS
ACGGCAACAATTTCAGGGAT+GGG 0.539046 8.4:-47228044 None:intergenic
AAGTTTCAACAAATTTCCCC+AGG 0.541943 8.4:+47231027 MS.gene34245:CDS
CACGTGCTGCTGCTAGATCA+TGG 0.544481 8.4:+47230218 MS.gene34245:CDS
AGATCCTTCCCCTGAGCAGT+GGG 0.546793 8.4:+47229827 MS.gene34245:CDS
AACGGCAACAATTTCAGGGA+TGG 0.548624 8.4:-47228045 None:intergenic
GATCAGGAGATGGGGTCTCA+GGG 0.554324 8.4:-47231216 None:intergenic
ACCGAGGAGTGCTTCGAGAA+GGG 0.554409 8.4:-47228093 None:intergenic
AATGACTTTCAACCATGTGC+CGG 0.555549 8.4:+47230992 MS.gene34245:CDS
AACCGAGGAGTGCTTCGAGA+AGG 0.556754 8.4:-47228094 None:intergenic
CCTCCATATACAGGATCACC+TGG 0.558162 8.4:-47231241 None:intergenic
TGTATATGGAGGGCATAGAA+AGG 0.559667 8.4:+47231252 MS.gene34245:CDS
CGGCAACAATTTCAGGGATG+GGG 0.560566 8.4:-47228043 None:intergenic
CATCTTCGCGACGGTGTCAA+GGG 0.562680 8.4:+47229410 MS.gene34245:CDS
GGAGGGCATAGAAAGGAGCT+TGG 0.564041 8.4:+47231259 MS.gene34245:CDS
TGCTTCTCATGATGTAAGGA+GGG 0.564181 8.4:+47231093 MS.gene34245:CDS
AAGGGCGAGTGTTGTCTCCA+AGG 0.564899 8.4:-47229298 None:intergenic
CAGATCCTTCCCCTGAGCAG+TGG 0.565180 8.4:+47229826 MS.gene34245:CDS
CAGATGAGAAATGTCTGAAG+TGG 0.568898 8.4:-47229609 None:intergenic
ACCCCATCTCCTGATCAGCC+AGG 0.569139 8.4:+47231223 MS.gene34245:CDS
CTTCAGACATTTCTCATCTG+AGG 0.569507 8.4:+47229612 MS.gene34245:CDS
TGAATGAATTTACCTGGAAG+CGG 0.574973 8.4:-47228208 None:intergenic
ATTCCACACTACTTTGCTGA+AGG 0.577379 8.4:-47228742 None:intergenic
ATGGACTGGTAACTGAATCA+AGG 0.577837 8.4:-47230949 None:intergenic
TTCACATCGGTGATGACACC+AGG 0.578996 8.4:-47229897 None:intergenic
CTGCTTCTCATGATGTAAGG+AGG 0.579370 8.4:+47231092 MS.gene34245:CDS
GAGCCACAACAAGGCGATCG+CGG 0.580908 8.4:-47232134 None:intergenic
TTTCAAATGAAGAGTTCCGC+AGG 0.581321 8.4:+47229354 MS.gene34245:CDS
GAGTACCCATCTCAACTTCA+CGG 0.582067 8.4:-47228130 None:intergenic
GACGAAGAGTGGCATTGGGG+GGG 0.582077 8.4:-47229920 None:intergenic
GCCGTTGGTGGCCAATCTGA+TGG 0.582734 8.4:+47228062 MS.gene34245:CDS
GTAGGAATTTACTGATCGGT+GGG 0.584050 8.4:+47229244 MS.gene34245:intron
TGTAGCACATCTATGGCACC+AGG 0.584087 8.4:-47232213 None:intergenic
CAAATTTGATAATCGTCTCA+AGG 0.587563 8.4:+47228838 MS.gene34245:CDS
TGTAGGAATTTACTGATCGG+TGG 0.592128 8.4:+47229243 MS.gene34245:intron
AGACGAAGAGTGGCATTGGG+GGG 0.592146 8.4:-47229921 None:intergenic
GAAGCGTTTATGCCGGCACA+TGG 0.592289 8.4:-47231004 None:intergenic
TGGAGGGGCTGCATTTGAGA+GGG 0.593307 8.4:+47229947 MS.gene34245:CDS
GCTTGGAATATGCAATGACA+TGG 0.594337 8.4:+47231276 MS.gene34245:CDS
AAAGACGAAGAGTGGCATTG+GGG 0.597295 8.4:-47229923 None:intergenic
GCAACGAGGTTCAAGAGCGG+AGG 0.599376 8.4:-47228186 None:intergenic
ATCGTAGATGCCGAAACCAC+CGG 0.600918 8.4:-47228397 None:intergenic
ACCTGGCTGATCAGGAGATG+GGG 0.601811 8.4:-47231224 None:intergenic
CCAGGTGATCCTGTATATGG+AGG 0.602528 8.4:+47231241 MS.gene34245:CDS
CAGCCGCGATCGCCTTGTTG+TGG 0.604218 8.4:+47232131 MS.gene34245:intron
TTGCTTGCCCATGCTGGCCG+AGG 0.604281 8.4:+47230157 MS.gene34245:CDS
TTCAGCAAAGTAGTGTGGAA+TGG 0.605436 8.4:+47228744 MS.gene34245:CDS
CTTCGCGACGGTGTCAAGGG+AGG 0.607661 8.4:+47229413 MS.gene34245:CDS
AATGTCCGTGAAGTTGAGAT+GGG 0.609276 8.4:+47228125 MS.gene34245:CDS
CAACGAGGTTCAAGAGCGGA+GGG 0.610546 8.4:-47228185 None:intergenic
GCAGACCTGTGAGTATGGAC+TGG 0.612333 8.4:-47230963 None:intergenic
TCTCACCATTATTGACACAC+CGG 0.612491 8.4:+47228525 MS.gene34245:CDS
GATCGCTATTTGAGTGCAAG+TGG 0.616547 8.4:+47229272 MS.gene34245:CDS
CCAACCCGAGAGCCACAACA+AGG 0.618603 8.4:-47232143 None:intergenic
AATGATTGTCCGTCTAAACG+TGG 0.620311 8.4:-47228807 None:intergenic
AAGACGAAGAGTGGCATTGG+GGG 0.622835 8.4:-47229922 None:intergenic
CAGGTGATCCTGTATATGGA+GGG 0.623092 8.4:+47231242 MS.gene34245:CDS
CCCTCCATAAAGACGAAGAG+TGG 0.625484 8.4:-47229931 None:intergenic
ACTACACCTTTGCTCAAGCA+AGG 0.627943 8.4:-47229543 None:intergenic
AATAGAGTCCAACCACAAAG+AGG 0.628614 8.4:-47228771 None:intergenic
GTTCCTTCAGCAAAGTAGTG+TGG 0.629139 8.4:+47228739 MS.gene34245:CDS
TCCAGAAAAGAATGCACTGG+AGG 0.631805 8.4:+47231132 MS.gene34245:CDS
TAAAGCAGCACACGTTCGAG+AGG 0.632439 8.4:+47231168 MS.gene34245:CDS
TCACATGCAGTATCAAGAAG+AGG 0.637274 8.4:-47230247 None:intergenic
AGTTACCAGTCCATACTCAC+AGG 0.637819 8.4:+47230958 MS.gene34245:CDS
CTTGGAATATGCAATGACAT+GGG 0.638221 8.4:+47231277 MS.gene34245:CDS
AGCTTCCTAAAACAAAAGCA+AGG 0.639138 8.4:-47230273 None:intergenic
AAAGCAGCACACGTTCGAGA+GGG 0.639720 8.4:+47231169 MS.gene34245:CDS
AATGAAGAGGCTGAAGCCTG+GGG 0.640485 8.4:-47231043 None:intergenic
ACATGTAGGAATTTACTGAT+CGG 0.642242 8.4:+47229240 MS.gene34245:intron
GCACTGGAGGAAACAACACC+AGG 0.642547 8.4:+47231145 MS.gene34245:CDS
AGACCCCATCCACATCCACC+CGG 0.647245 8.4:+47227937 MS.gene34245:CDS
AACAAGAGTATACGGTGTGG+AGG 0.647370 8.4:-47228719 None:intergenic
GAAGCATTTGAAGAATAAGA+GGG 0.647522 8.4:-47228157 None:intergenic
TGGCTCTAGAAAGAAACCGC+AGG 0.648302 8.4:+47230305 MS.gene34245:CDS
GTTACATCGACATTAAACTC+TGG 0.649396 8.4:+47231478 MS.gene34245:CDS
GGGGTGCTTTCTTGACCGGG+TGG 0.654645 8.4:-47227952 None:intergenic
CGAAGCGAGATTTGGAATCG+GGG 0.657901 8.4:-47227971 None:intergenic
CCGCAGGCAGATCTCTCATG+TGG 0.657902 8.4:+47229370 MS.gene34245:CDS
TTGGAATATGCAATGACATG+GGG 0.665817 8.4:+47231278 MS.gene34245:CDS
AGTAGCCAATGTCTTCACCA+TGG 0.677040 8.4:-47228696 None:intergenic
AGAAGAGTATGGAAGTCCGG+TGG 0.677609 8.4:+47228381 MS.gene34245:CDS
GATCTCTCATGTGGACTCGG+AGG 0.678782 8.4:+47229379 MS.gene34245:CDS
AGCTTCTATCAGCAACCATG+TGG 0.680329 8.4:+47229655 MS.gene34245:CDS
GCTTGAGCAAAGGTGTAGTG+AGG 0.681974 8.4:+47229547 MS.gene34245:CDS
CTCACCGAAAGCGACAGCAG+CGG 0.686495 8.4:-47228015 None:intergenic
GTAGAAGAGCGGTCTCAAAG+TGG 0.702768 8.4:+47229861 MS.gene34245:CDS
ATGATTGTCCGTCTAAACGT+GGG 0.703297 8.4:-47228806 None:intergenic
TACATGCTGAATCATGCCTG+CGG 0.705447 8.4:-47230321 None:intergenic
GCATTTGAAGAATAAGAGGG+CGG 0.705612 8.4:-47228154 None:intergenic
GTTATGCATCATCTTCGCGA+CGG 0.711144 8.4:+47229401 MS.gene34245:CDS
AATACCTTGAGAACAAACCC+CGG 0.725703 8.4:-47228544 None:intergenic
GCGGCAACGAGGTTCAAGAG+CGG 0.730968 8.4:-47228189 None:intergenic
GGACATTGAAGCGAAAACCG+AGG 0.735109 8.4:-47228109 None:intergenic
CCACATGAGAGATCTGCCTG+CGG 0.735319 8.4:-47229370 None:intergenic
TTTACCTGGAAGCGGCAACG+AGG 0.743831 8.4:-47228200 None:intergenic
TTCCTAAAACAAAAGCAAGG+CGG 0.747988 8.4:-47230270 None:intergenic
AGGAACAAGAGTATACGGTG+TGG 0.749192 8.4:-47228722 None:intergenic
GATCCTTCCCCTGAGCAGTG+GGG 0.749398 8.4:+47229828 MS.gene34245:CDS
TCACCATTATTGACACACCG+GGG 0.774544 8.4:+47228527 MS.gene34245:CDS
GACTGGTAACTGAATCAAGG+TGG 0.786961 8.4:-47230946 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATAAATAAATAACTTTG+AGG - chr8.4:47231807-47231826 None:intergenic 10.0%
!! AAAATATAGTTAGAATCTAA+AGG - chr8.4:47230665-47230684 None:intergenic 15.0%
!! AAATATAGTTAGAATCTAAA+GGG - chr8.4:47230664-47230683 None:intergenic 15.0%
!! AATTGCAATCTTTAATATTA+CGG - chr8.4:47228971-47228990 None:intergenic 15.0%
!! CAAGAAATAAAACAAAATAT+AGG - chr8.4:47230765-47230784 None:intergenic 15.0%
!!! ATACATATTATTGTTTTACA+GGG + chr8.4:47229180-47229199 MS.gene34245:intron 15.0%
!!! TTTGTTAATTCATGTAATTT+TGG + chr8.4:47228308-47228327 MS.gene34245:intron 15.0%
!! AATAGACAGGAAATAAATTA+GGG - chr8.4:47230544-47230563 None:intergenic 20.0%
!! AATTATTGAATATACTTACG+TGG - chr8.4:47232071-47232090 None:intergenic 20.0%
!! CATTTCAAATTGAAATTCAT+TGG + chr8.4:47230101-47230120 MS.gene34245:intron 20.0%
!! GAAAATAAGTGACATAAATA+TGG - chr8.4:47231730-47231749 None:intergenic 20.0%
!! GTATCTATCATTACTTTAAT+AGG + chr8.4:47230123-47230142 MS.gene34245:intron 20.0%
!! TAATAGACAGGAAATAAATT+AGG - chr8.4:47230545-47230564 None:intergenic 20.0%
!! TGTAGTAGTATTTATGTATT+TGG - chr8.4:47231884-47231903 None:intergenic 20.0%
!! TTAGTTTATTTCATTTCTTC+TGG + chr8.4:47230631-47230650 MS.gene34245:intron 20.0%
!! TTGTGTAAAAAAAACAATAC+AGG + chr8.4:47228348-47228367 MS.gene34245:intron 20.0%
!!! AAATTAACTTTTCTGTGTTT+TGG + chr8.4:47230594-47230613 MS.gene34245:intron 20.0%
!!! AATTAACTTTTCTGTGTTTT+GGG + chr8.4:47230595-47230614 MS.gene34245:intron 20.0%
!!! AGCAAAATTTATTTTGAACT+TGG + chr8.4:47229706-47229725 MS.gene34245:intron 20.0%
!!! ATTCCATTTTATTTGGAAAT+GGG + chr8.4:47231368-47231387 MS.gene34245:CDS 20.0%
!!! CAAAATGATTCCATTTTATT+TGG + chr8.4:47231361-47231380 MS.gene34245:CDS 20.0%
!!! GAATTTCAATTTGAAATGAA+AGG - chr8.4:47230099-47230118 None:intergenic 20.0%
!!! GATACATATTATTGTTTTAC+AGG + chr8.4:47229179-47229198 MS.gene34245:intron 20.0%
!!! TTGATTTAATTTGTTCAACA+AGG + chr8.4:47231845-47231864 MS.gene34245:intron 20.0%
! AACACAGAAAAGTTAATTTC+TGG - chr8.4:47230593-47230612 None:intergenic 25.0%
! AACATCATAAATAAGACAGA+AGG - chr8.4:47230374-47230393 None:intergenic 25.0%
! AAGCACTATCATTATCATTA+AGG - chr8.4:47231990-47232009 None:intergenic 25.0%
! AATGAAGAAACATGAAATAC+CGG - chr8.4:47231944-47231963 None:intergenic 25.0%
! ACATCATAAATAAGACAGAA+GGG - chr8.4:47230373-47230392 None:intergenic 25.0%
! AGATATTAAGAGAAGAAGAA+AGG + chr8.4:47230499-47230518 MS.gene34245:intron 25.0%
! AGCACTATCATTATCATTAA+GGG - chr8.4:47231989-47232008 None:intergenic 25.0%
! ATAAATACTACTACATATGC+CGG + chr8.4:47231922-47231941 MS.gene34245:intron 25.0%
! ATGACATACAGTATTTAATG+TGG + chr8.4:47232044-47232063 MS.gene34245:intron 25.0%
! CAATTCAAGAAAAAATGAAG+AGG - chr8.4:47231059-47231078 None:intergenic 25.0%
! GAAAAGTTCAAATCCTATAT+TGG + chr8.4:47229446-47229465 MS.gene34245:CDS 25.0%
! GAAATAAATTAGGGTTCAAA+TGG - chr8.4:47230535-47230554 None:intergenic 25.0%
! TATTCAATTGCATAATAGAC+AGG - chr8.4:47230557-47230576 None:intergenic 25.0%
! TGTAAAAAAAACAATACAGG+AGG + chr8.4:47228351-47228370 MS.gene34245:intron 25.0%
! TTTAATATTACGGACAATTG+CGG - chr8.4:47228961-47228980 None:intergenic 25.0%
! TTTAGGAAGCTTATTTGATT+TGG + chr8.4:47230285-47230304 MS.gene34245:CDS 25.0%
!! ACATCACTGTTCTAAATAAA+CGG + chr8.4:47228901-47228920 MS.gene34245:intron 25.0%
!! GGTATGTATCATTTTATACA+AGG - chr8.4:47229034-47229053 None:intergenic 25.0%
!!! AATATTTTTTCCTCATGTCT+TGG + chr8.4:47230420-47230439 MS.gene34245:intron 25.0%
!!! GATTCCATTTTATTTGGAAA+TGG + chr8.4:47231367-47231386 MS.gene34245:CDS 25.0%
!!! TCAAATCCTATATTGGTTTT+GGG + chr8.4:47229453-47229472 MS.gene34245:CDS 25.0%
!!! TTATTTATTTTCTGCGATCT+TGG + chr8.4:47231544-47231563 MS.gene34245:intron 25.0%
!!! TTCAAATCCTATATTGGTTT+TGG + chr8.4:47229452-47229471 MS.gene34245:CDS 25.0%
!!! TTCCATTTTATTTGGAAATG+GGG + chr8.4:47231369-47231388 MS.gene34245:CDS 25.0%
!!! TTTAATTTGTTCAACAAGGT+TGG + chr8.4:47231849-47231868 MS.gene34245:intron 25.0%
ACATAAATATGGACACAGAA+AGG - chr8.4:47231719-47231738 None:intergenic 30.0%
ACATGTAGGAATTTACTGAT+CGG + chr8.4:47229240-47229259 MS.gene34245:intron 30.0%
ACTATCATTATCATTAAGGG+AGG - chr8.4:47231986-47232005 None:intergenic 30.0%
AGAGAATGAATGAATTTACC+TGG - chr8.4:47228217-47228236 None:intergenic 30.0%
AGTGCTTCACAAATTCTTAT+TGG + chr8.4:47228273-47228292 MS.gene34245:intron 30.0%
CAAAGTTGCAATAACATTCA+CGG - chr8.4:47229003-47229022 None:intergenic 30.0%
CTTGAGACGATTATCAAATT+TGG - chr8.4:47228840-47228859 None:intergenic 30.0%
TTTAGTGACGAGTTAGTAAT+GGG + chr8.4:47229215-47229234 MS.gene34245:intron 30.0%
TTTCATAAACTCATGATCTG+AGG + chr8.4:47230053-47230072 MS.gene34245:intron 30.0%
! CAAATTTGATAATCGTCTCA+AGG + chr8.4:47228838-47228857 MS.gene34245:CDS 30.0%
! CATCACTGTTCTAAATAAAC+GGG + chr8.4:47228902-47228921 MS.gene34245:intron 30.0%
! GAAGCATTTGAAGAATAAGA+GGG - chr8.4:47228160-47228179 None:intergenic 30.0%
! TAACTGTTTTACTCTGCAAA+TGG + chr8.4:47229769-47229788 MS.gene34245:intron 30.0%
! TGAAGCATTTGAAGAATAAG+AGG - chr8.4:47228161-47228180 None:intergenic 30.0%
! TGATAGTGCTTTCTTTCATT+TGG + chr8.4:47231999-47232018 MS.gene34245:intron 30.0%
! TGGATTGGATTCAAAAATTG+AGG + chr8.4:47229586-47229605 MS.gene34245:CDS 30.0%
! TGTTTTACAGGGTTCAATAA+TGG + chr8.4:47229191-47229210 MS.gene34245:intron 30.0%
! TTCATTTTGTAGCACATCTA+TGG - chr8.4:47232223-47232242 None:intergenic 30.0%
! TTTTAGTGACGAGTTAGTAA+TGG + chr8.4:47229214-47229233 MS.gene34245:intron 30.0%
!! ATAAATAACTTTGAGGCTTC+CGG - chr8.4:47231800-47231819 None:intergenic 30.0%
!! ATCTGATTGTTTTGTATGGT+AGG + chr8.4:47228631-47228650 MS.gene34245:intron 30.0%
!! TATTCAGCTTTGAGTACAAT+TGG - chr8.4:47228490-47228509 None:intergenic 30.0%
!! TGAGATCTGATTGTTTTGTA+TGG + chr8.4:47228627-47228646 MS.gene34245:intron 30.0%
!! TGTTTGTTTTCCATGAAGAT+GGG + chr8.4:47230813-47230832 MS.gene34245:intron 30.0%
!! TTGTTTGTTTTCCATGAAGA+TGG + chr8.4:47230812-47230831 MS.gene34245:intron 30.0%
AAATTGATCCCACGTTTAGA+CGG + chr8.4:47228798-47228817 MS.gene34245:CDS 35.0%
AAATTTCCAGTTCCAGCTTT+AGG + chr8.4:47231595-47231614 MS.gene34245:intron 35.0%
AAGATACTGATAGAGCTGAA+TGG + chr8.4:47230718-47230737 MS.gene34245:intron 35.0%
AAGTTTCAACAAATTTCCCC+AGG + chr8.4:47231027-47231046 MS.gene34245:CDS 35.0%
AATTTCCAGTTCCAGCTTTA+GGG + chr8.4:47231596-47231615 MS.gene34245:intron 35.0%
ACCTTCAGTTGCAATTTAAC+CGG + chr8.4:47231778-47231797 MS.gene34245:intron 35.0%
AGCTCTATCAGTATCTTACA+TGG - chr8.4:47230715-47230734 None:intergenic 35.0%
AGCTTCCTAAAACAAAAGCA+AGG - chr8.4:47230276-47230295 None:intergenic 35.0%
ATAAAAACGGGAAACATGGA+TGG + chr8.4:47230836-47230855 MS.gene34245:CDS 35.0%
ATGAGTTCAAAAACGTTGCT+CGG + chr8.4:47232289-47232308 MS.gene34245:CDS 35.0%
ATGATAAGTGATTCGACTGA+TGG + chr8.4:47228582-47228601 MS.gene34245:intron 35.0%
ATTCTGCTTCTCATGATGTA+AGG + chr8.4:47231089-47231108 MS.gene34245:CDS 35.0%
CATGAAGATGGGATAAAAAC+GGG + chr8.4:47230824-47230843 MS.gene34245:intron 35.0%
CCATGAAGATGGGATAAAAA+CGG + chr8.4:47230823-47230842 MS.gene34245:intron 35.0%
CGACTGATGGTATGTTTAAT+TGG + chr8.4:47228595-47228614 MS.gene34245:intron 35.0%
CTCCCCATTTCCAAATAAAA+TGG - chr8.4:47231374-47231393 None:intergenic 35.0%
CTTGGAATATGCAATGACAT+GGG + chr8.4:47231277-47231296 MS.gene34245:CDS 35.0%
GAAAAACAACAGTAGAAGAG+CGG + chr8.4:47229850-47229869 MS.gene34245:CDS 35.0%
GCTCTATCAGTATCTTACAT+GGG - chr8.4:47230714-47230733 None:intergenic 35.0%
GGTTATCTTCAATAGTGCTT+CGG - chr8.4:47228446-47228465 None:intergenic 35.0%
GTGTCAATAATGGTGAGATT+TGG - chr8.4:47228523-47228542 None:intergenic 35.0%
GTTACATCGACATTAAACTC+TGG + chr8.4:47231478-47231497 MS.gene34245:CDS 35.0%
TAAATTGCAACTGAAGGTGA+TGG - chr8.4:47231776-47231795 None:intergenic 35.0%
TGAACTCATTCAAGCAAGAA+TGG - chr8.4:47232278-47232297 None:intergenic 35.0%
TGAATGAATTTACCTGGAAG+CGG - chr8.4:47228211-47228230 None:intergenic 35.0%
TGCTTACACTCGATTCTTAA+AGG + chr8.4:47230889-47230908 MS.gene34245:CDS 35.0%
TGTGAACGATGAGAAATTCA+TGG + chr8.4:47232176-47232195 MS.gene34245:CDS 35.0%
TTCCTAAAACAAAAGCAAGG+CGG - chr8.4:47230273-47230292 None:intergenic 35.0%
TTGGAATATGCAATGACATG+GGG + chr8.4:47231278-47231297 MS.gene34245:CDS 35.0%
! GTTAGTAATGGGATACATGT+AGG + chr8.4:47229226-47229245 MS.gene34245:intron 35.0%
!! ATTTTCTCCGGTGTCAATTT+AGG + chr8.4:47229127-47229146 MS.gene34245:intron 35.0%
!! GTCTCAAGTTTGATTTTCTC+CGG + chr8.4:47229115-47229134 MS.gene34245:intron 35.0%
!!! TAGGTTTTCATGCTGCTTTA+AGG + chr8.4:47230864-47230883 MS.gene34245:CDS 35.0%
AACTATGATTACCCACCACA+TGG - chr8.4:47229673-47229692 None:intergenic 40.0%
AATACCTTGAGAACAAACCC+CGG - chr8.4:47228547-47228566 None:intergenic 40.0%
AATAGAGTCCAACCACAAAG+AGG - chr8.4:47228774-47228793 None:intergenic 40.0%
AATATATTGCTTGCCCATGC+TGG + chr8.4:47230151-47230170 MS.gene34245:CDS 40.0%
AATGACTTTCAACCATGTGC+CGG + chr8.4:47230992-47231011 MS.gene34245:CDS 40.0%
AATGATTGTCCGTCTAAACG+TGG - chr8.4:47228810-47228829 None:intergenic 40.0%
AATGCCACTCTTCGTCTTTA+TGG + chr8.4:47229927-47229946 MS.gene34245:CDS 40.0%
AATGTCCGTGAAGTTGAGAT+GGG + chr8.4:47228125-47228144 MS.gene34245:CDS 40.0%
ACCATGGAAAGAATCTCATC+AGG - chr8.4:47228683-47228702 None:intergenic 40.0%
AGCACAACAAGGTGGTATTA+TGG - chr8.4:47232103-47232122 None:intergenic 40.0%
ATAAAGACGAAGAGTGGCAT+TGG - chr8.4:47229928-47229947 None:intergenic 40.0%
ATCAAACTTGAGACCTTGAG+AGG - chr8.4:47229109-47229128 None:intergenic 40.0%
ATGATTGTCCGTCTAAACGT+GGG - chr8.4:47228809-47228828 None:intergenic 40.0%
ATTCCACACTACTTTGCTGA+AGG - chr8.4:47228745-47228764 None:intergenic 40.0%
ATTCTAGACGCTCTCTTTCT+TGG - chr8.4:47231304-47231323 None:intergenic 40.0%
ATTTCTCAAACCCCATTGAG+AGG - chr8.4:47230466-47230485 None:intergenic 40.0%
CAATAACATTCACGGTCACA+TGG - chr8.4:47228995-47229014 None:intergenic 40.0%
CAATGGGGTTTGAGAAATGT+AGG + chr8.4:47230468-47230487 MS.gene34245:intron 40.0%
CACAAGATAGAAGCTTACCA+AGG - chr8.4:47231514-47231533 None:intergenic 40.0%
CACTTGTGAACTTTCTGGAT+TGG + chr8.4:47229571-47229590 MS.gene34245:CDS 40.0%
CAGATGAGAAATGTCTGAAG+TGG - chr8.4:47229612-47229631 None:intergenic 40.0%
CGTGAAGTTCTTGTTGAAAG+AGG + chr8.4:47231454-47231473 MS.gene34245:CDS 40.0%
CTATCGTTATCCAAGACATG+AGG - chr8.4:47230433-47230452 None:intergenic 40.0%
CTTCAGACATTTCTCATCTG+AGG + chr8.4:47229612-47229631 MS.gene34245:CDS 40.0%
GAAATGTTGCCTCTATCCTT+AGG - chr8.4:47229338-47229357 None:intergenic 40.0%
GAGGAAGATTCAGAAGAGTA+TGG + chr8.4:47228370-47228389 MS.gene34245:CDS 40.0%
GATACATACCAAACCCACTT+GGG + chr8.4:47229044-47229063 MS.gene34245:intron 40.0%
GATACTTCTCTTCAAGCTAC+TGG + chr8.4:47232021-47232040 MS.gene34245:intron 40.0%
GCATTTGAAGAATAAGAGGG+CGG - chr8.4:47228157-47228176 None:intergenic 40.0%
GCTTGGAATATGCAATGACA+TGG + chr8.4:47231276-47231295 MS.gene34245:CDS 40.0%
GTAGGAATTTACTGATCGGT+GGG + chr8.4:47229244-47229263 MS.gene34245:intron 40.0%
TAAAGACGAAGAGTGGCATT+GGG - chr8.4:47229927-47229946 None:intergenic 40.0%
TAGCCTACCTAAATTGACAC+CGG - chr8.4:47229137-47229156 None:intergenic 40.0%
TAGGCAGAGCCACAAAAAAA+GGG - chr8.4:47229319-47229338 None:intergenic 40.0%
TCACATGCAGTATCAAGAAG+AGG - chr8.4:47230250-47230269 None:intergenic 40.0%
TCCGGTTAAATTGCAACTGA+AGG - chr8.4:47231782-47231801 None:intergenic 40.0%
TCTCACCATTATTGACACAC+CGG + chr8.4:47228525-47228544 MS.gene34245:CDS 40.0%
TCTTTCCATGGTGAAGACAT+TGG + chr8.4:47228691-47228710 MS.gene34245:CDS 40.0%
TGATACATACCAAACCCACT+TGG + chr8.4:47229043-47229062 MS.gene34245:intron 40.0%
TGCAAATGGATGTTCCATCA+GGG + chr8.4:47229783-47229802 MS.gene34245:intron 40.0%
TGCTTCTCATGATGTAAGGA+GGG + chr8.4:47231093-47231112 MS.gene34245:CDS 40.0%
TGGGATAAAAACGGGAAACA+TGG + chr8.4:47230832-47230851 MS.gene34245:CDS 40.0%
TGTAGGAATTTACTGATCGG+TGG + chr8.4:47229243-47229262 MS.gene34245:intron 40.0%
TTAGGCAGAGCCACAAAAAA+AGG - chr8.4:47229320-47229339 None:intergenic 40.0%
TTCAGCAAAGTAGTGTGGAA+TGG + chr8.4:47228744-47228763 MS.gene34245:CDS 40.0%
TTTCAAATGAAGAGTTCCGC+AGG + chr8.4:47229354-47229373 MS.gene34245:CDS 40.0%
TTTCTATGCCCTCCATATAC+AGG - chr8.4:47231253-47231272 None:intergenic 40.0%
TTTCTCAAACCCCATTGAGA+GGG - chr8.4:47230465-47230484 None:intergenic 40.0%
TTTGTATGGTAGGCGAAGAA+GGG + chr8.4:47228641-47228660 MS.gene34245:intron 40.0%
! ATTTCCAGTTCCAGCTTTAG+GGG + chr8.4:47231597-47231616 MS.gene34245:intron 40.0%
! GAAACTTGAAGCGTTTATGC+CGG - chr8.4:47231014-47231033 None:intergenic 40.0%
! GCTGAAGGAACAAGAGTATA+CGG - chr8.4:47228730-47228749 None:intergenic 40.0%
! GCTTTGAGTACAATTGGCTT+AGG - chr8.4:47228484-47228503 None:intergenic 40.0%
! TGTATATGGAGGGCATAGAA+AGG + chr8.4:47231252-47231271 MS.gene34245:CDS 40.0%
! TTCAGAAGAGTATGGAAGTC+CGG + chr8.4:47228378-47228397 MS.gene34245:CDS 40.0%
! TTCGAAGCGAGATTTGGAAT+CGG - chr8.4:47227976-47227995 None:intergenic 40.0%
! TTTTGTATGGTAGGCGAAGA+AGG + chr8.4:47228640-47228659 MS.gene34245:intron 40.0%
!! ATGGACTGGTAACTGAATCA+AGG - chr8.4:47230952-47230971 None:intergenic 40.0%
!! CCGTTTTTATCCCATCTTCA+TGG - chr8.4:47230826-47230845 None:intergenic 40.0%
!! CTTAGGAGAAACTGCTGTTT+TGG - chr8.4:47228467-47228486 None:intergenic 40.0%
!! GAATTTGTGAAGCACTGACA+CGG - chr8.4:47228269-47228288 None:intergenic 40.0%
!!! TTTTTTTGTGGCTCTGCCTA+AGG + chr8.4:47229319-47229338 MS.gene34245:CDS 40.0%
AAAATGAAGAGGCTGAAGCC+TGG - chr8.4:47231048-47231067 None:intergenic 45.0%
AAACCCCGGTGTGTCAATAA+TGG - chr8.4:47228533-47228552 None:intergenic 45.0%
AAAGACGAAGAGTGGCATTG+GGG - chr8.4:47229926-47229945 None:intergenic 45.0%
AAATGAAGAGGCTGAAGCCT+GGG - chr8.4:47231047-47231066 None:intergenic 45.0%
AACGGCAACAATTTCAGGGA+TGG - chr8.4:47228048-47228067 None:intergenic 45.0%
AAGTAGCAGACCTGTGAGTA+TGG - chr8.4:47230971-47230990 None:intergenic 45.0%
ACGGCAACAATTTCAGGGAT+GGG - chr8.4:47228047-47228066 None:intergenic 45.0%
ACGTATACGTGCGAAATGCT+GGG - chr8.4:47231437-47231456 None:intergenic 45.0%
ACTACACCTTTGCTCAAGCA+AGG - chr8.4:47229546-47229565 None:intergenic 45.0%
AGCTCCAGAAAAGAATGCAC+TGG + chr8.4:47231129-47231148 MS.gene34245:CDS 45.0%
AGCTTCTATCAGCAACCATG+TGG + chr8.4:47229655-47229674 MS.gene34245:CDS 45.0%
AGTAGCCAATGTCTTCACCA+TGG - chr8.4:47228699-47228718 None:intergenic 45.0%
AGTTACCAGTCCATACTCAC+AGG + chr8.4:47230958-47230977 MS.gene34245:CDS 45.0%
ATCCCTGAAATTGTTGCCGT+TGG + chr8.4:47228047-47228066 MS.gene34245:CDS 45.0%
ATCTGCTGCACCATCAATCA+AGG - chr8.4:47229811-47229830 None:intergenic 45.0%
ATGTGAAGCTTCTTCCTTGC+TGG + chr8.4:47230343-47230362 MS.gene34245:intron 45.0%
ATTTACTGATCGGTGGGAAG+TGG + chr8.4:47229250-47229269 MS.gene34245:CDS 45.0%
CAATGTCCGTGAAGTTGAGA+TGG + chr8.4:47228124-47228143 MS.gene34245:CDS 45.0%
CACAAACAAGCACAACAAGG+TGG - chr8.4:47232111-47232130 None:intergenic 45.0%
CACCAACGGCAACAATTTCA+GGG - chr8.4:47228052-47228071 None:intergenic 45.0%
CACTCTTCGTCTTTATGGAG+GGG + chr8.4:47229932-47229951 MS.gene34245:CDS 45.0%
CAGACGCCCAAAACCAATAT+AGG - chr8.4:47229462-47229481 None:intergenic 45.0%
CAGGTGATCCTGTATATGGA+GGG + chr8.4:47231242-47231261 MS.gene34245:CDS 45.0%
CCACTCTTCGTCTTTATGGA+GGG + chr8.4:47229931-47229950 MS.gene34245:CDS 45.0%
CGATCTTGGATGCTTGAATG+TGG + chr8.4:47231558-47231577 MS.gene34245:intron 45.0%
CTCACCATTATTGACACACC+GGG + chr8.4:47228526-47228545 MS.gene34245:CDS 45.0%
CTGCAAATGGATGTTCCATC+AGG + chr8.4:47229782-47229801 MS.gene34245:intron 45.0%
CTGCACAAACAAGCACAACA+AGG - chr8.4:47232114-47232133 None:intergenic 45.0%
CTGCTTCTCATGATGTAAGG+AGG + chr8.4:47231092-47231111 MS.gene34245:CDS 45.0%
GACTGGTAACTGAATCAAGG+TGG - chr8.4:47230949-47230968 None:intergenic 45.0%
GAGGTCACTTGTGAACTTTC+TGG + chr8.4:47229566-47229585 MS.gene34245:CDS 45.0%
GAGTACCCATCTCAACTTCA+CGG - chr8.4:47228133-47228152 None:intergenic 45.0%
GATCGCTATTTGAGTGCAAG+TGG + chr8.4:47229272-47229291 MS.gene34245:CDS 45.0%
GCCTGATGAGATTCTTTCCA+TGG + chr8.4:47228679-47228698 MS.gene34245:CDS 45.0%
GGAAACATGGATGGCTATGT+AGG + chr8.4:47230845-47230864 MS.gene34245:CDS 45.0%
GTAAGCTTCGAAGCGAGATT+TGG - chr8.4:47227982-47228001 None:intergenic 45.0%
GTTATGCATCATCTTCGCGA+CGG + chr8.4:47229401-47229420 MS.gene34245:CDS 45.0%
GTTCCTTCAGCAAAGTAGTG+TGG + chr8.4:47228739-47228758 MS.gene34245:CDS 45.0%
TACATGCTGAATCATGCCTG+CGG - chr8.4:47230324-47230343 None:intergenic 45.0%
TAGAAGCTTACCAAGGAGTC+AGG - chr8.4:47231507-47231526 None:intergenic 45.0%
TCAAGCAAGGCAAGAGTTGA+TGG - chr8.4:47229533-47229552 None:intergenic 45.0%
TCACCATTATTGACACACCG+GGG + chr8.4:47228527-47228546 MS.gene34245:CDS 45.0%
TCACTAACTGTAGCCTCACT+TGG + chr8.4:47228935-47228954 MS.gene34245:intron 45.0%
TCCAGAAAAGAATGCACTGG+AGG + chr8.4:47231132-47231151 MS.gene34245:CDS 45.0%
TCTATCAGCAACCATGTGGT+GGG + chr8.4:47229659-47229678 MS.gene34245:intron 45.0%
TTCTATCAGCAACCATGTGG+TGG + chr8.4:47229658-47229677 MS.gene34245:intron 45.0%
TTCTCAAACCCCATTGAGAG+GGG - chr8.4:47230464-47230483 None:intergenic 45.0%
TTGAGTGCAAGTGGTTACCT+TGG + chr8.4:47229281-47229300 MS.gene34245:CDS 45.0%
TTGGATGCTTGAATGTGGCA+AGG + chr8.4:47231563-47231582 MS.gene34245:intron 45.0%
TTTGGAAATGGGGAGAGAAC+AGG + chr8.4:47231379-47231398 MS.gene34245:CDS 45.0%
! AACAAGAGTATACGGTGTGG+AGG - chr8.4:47228722-47228741 None:intergenic 45.0%
! AGGAACAAGAGTATACGGTG+TGG - chr8.4:47228725-47228744 None:intergenic 45.0%
! ATCACCTTTTCCCTTGAGAC+TGG - chr8.4:47230017-47230036 None:intergenic 45.0%
! CTCAAAGTGGCATTGGGATT+TGG + chr8.4:47229874-47229893 MS.gene34245:CDS 45.0%
! GCGTCTAGAATGACAGGAAA+TGG + chr8.4:47231313-47231332 MS.gene34245:CDS 45.0%
! TCACCTTTTCCCTTGAGACT+GGG - chr8.4:47230016-47230035 None:intergenic 45.0%
! TCCTCCAGTGCATTCTTTTC+TGG - chr8.4:47231136-47231155 None:intergenic 45.0%
! TCGAAGCGAGATTTGGAATC+GGG - chr8.4:47227975-47227994 None:intergenic 45.0%
! TCTCCGGTGTCAATTTAGGT+AGG + chr8.4:47229131-47229150 MS.gene34245:intron 45.0%
!! AAGAGAGCGTCTAGAATGAC+AGG + chr8.4:47231307-47231326 MS.gene34245:CDS 45.0%
!! TTGTTTTTCCCCACTGCTCA+GGG - chr8.4:47229839-47229858 None:intergenic 45.0%
!!! ATATTGGTTTTGGGCGTCTG+AGG + chr8.4:47229462-47229481 MS.gene34245:CDS 45.0%
!!! CAACACTCGCCCTTTTTTTG+TGG + chr8.4:47229307-47229326 MS.gene34245:CDS 45.0%
!!! GACCGCCTTGCTTTTGTTTT+AGG + chr8.4:47230268-47230287 MS.gene34245:CDS 45.0%
!!! TATTGGTTTTGGGCGTCTGA+GGG + chr8.4:47229463-47229482 MS.gene34245:CDS 45.0%
!!! ATTTAATTTAATTTATTTTC+TGG + chr8.4:47231822-47231841 MS.gene34245:intron 5.0%
AAAGCAGCACACGTTCGAGA+GGG + chr8.4:47231169-47231188 MS.gene34245:CDS 50.0%
AATGAAGAGGCTGAAGCCTG+GGG - chr8.4:47231046-47231065 None:intergenic 50.0%
ACTCTGGATTCCTGACTCCT+TGG + chr8.4:47231494-47231513 MS.gene34245:CDS 50.0%
AGCGGTCTCAAAGTGGCATT+GGG + chr8.4:47229868-47229887 MS.gene34245:CDS 50.0%
AGTCTCATACCCCCTCTCAA+TGG + chr8.4:47230451-47230470 MS.gene34245:intron 50.0%
ATCGTAGATGCCGAAACCAC+CGG - chr8.4:47228400-47228419 None:intergenic 50.0%
ATCTCATCAGGCGTGTTCTC+CGG - chr8.4:47228671-47228690 None:intergenic 50.0%
ATGGACATGTTTGTCGCTCC+TGG + chr8.4:47232195-47232214 MS.gene34245:CDS 50.0%
ATGGTGCTCCTCTTTGTGGT+TGG + chr8.4:47228763-47228782 MS.gene34245:CDS 50.0%
CAATATAGCGCCCCTAAAGC+TGG - chr8.4:47231610-47231629 None:intergenic 50.0%
CACGTATACGTGCGAAATGC+TGG - chr8.4:47231438-47231457 None:intergenic 50.0%
CAGCCAGGTGATCCTGTATA+TGG + chr8.4:47231238-47231257 MS.gene34245:CDS 50.0%
CATACCAAACCCACTTGGGT+TGG + chr8.4:47229048-47229067 MS.gene34245:intron 50.0%
CCACCAACGGCAACAATTTC+AGG - chr8.4:47228053-47228072 None:intergenic 50.0%
CCAGGTGATCCTGTATATGG+AGG + chr8.4:47231241-47231260 MS.gene34245:CDS 50.0%
CCCTCCATAAAGACGAAGAG+TGG - chr8.4:47229934-47229953 None:intergenic 50.0%
CCTCCATATACAGGATCACC+TGG - chr8.4:47231244-47231263 None:intergenic 50.0%
CCTGAAATTGTTGCCGTTGG+TGG + chr8.4:47228050-47228069 MS.gene34245:CDS 50.0%
CGGACACTAACACGTTGACA+CGG - chr8.4:47228249-47228268 None:intergenic 50.0%
CGGCAACAATTTCAGGGATG+GGG - chr8.4:47228046-47228065 None:intergenic 50.0%
CTAACACGTTGACACGGTGT+TGG - chr8.4:47228243-47228262 None:intergenic 50.0%
CTCTTGCCTTGCTTGAGCAA+AGG + chr8.4:47229537-47229556 MS.gene34245:CDS 50.0%
GATGTGGATGGGGTCTTTGT+GGG - chr8.4:47227933-47227952 None:intergenic 50.0%
GCAGATCTCTCATGTGGACT+CGG + chr8.4:47229376-47229395 MS.gene34245:CDS 50.0%
GCCACTCTTCGTCTTTATGG+AGG + chr8.4:47229930-47229949 MS.gene34245:CDS 50.0%
GGACATTGAAGCGAAAACCG+AGG - chr8.4:47228112-47228131 None:intergenic 50.0%
GGGAGCTCTTTCCATCAGAT+TGG - chr8.4:47228076-47228095 None:intergenic 50.0%
GTAGAAGAGCGGTCTCAAAG+TGG + chr8.4:47229861-47229880 MS.gene34245:CDS 50.0%
GTATGGAAGTCCGGTGGTTT+CGG + chr8.4:47228387-47228406 MS.gene34245:CDS 50.0%
GTCTCATACCCCCTCTCAAT+GGG + chr8.4:47230452-47230471 MS.gene34245:intron 50.0%
TAAAGCAGCACACGTTCGAG+AGG + chr8.4:47231168-47231187 MS.gene34245:CDS 50.0%
TCTCAAACCCCATTGAGAGG+GGG - chr8.4:47230463-47230482 None:intergenic 50.0%
TCTCATACCCCCTCTCAATG+GGG + chr8.4:47230453-47230472 MS.gene34245:intron 50.0%
TGGAATGGTGCTCCTCTTTG+TGG + chr8.4:47228759-47228778 MS.gene34245:CDS 50.0%
TGGGCGTCTGAGGGATTATT+TGG + chr8.4:47229472-47229491 MS.gene34245:CDS 50.0%
TGTAGCACATCTATGGCACC+AGG - chr8.4:47232216-47232235 None:intergenic 50.0%
TTCACATCGGTGATGACACC+AGG - chr8.4:47229900-47229919 None:intergenic 50.0%
! AAGACGAAGAGTGGCATTGG+GGG - chr8.4:47229925-47229944 None:intergenic 50.0%
! AATCGGGGTGCTTTCTTGAC+CGG - chr8.4:47227959-47227978 None:intergenic 50.0%
! ACCTTTTCCCTTGAGACTGG+GGG - chr8.4:47230014-47230033 None:intergenic 50.0%
! AGAAGAGTATGGAAGTCCGG+TGG + chr8.4:47228381-47228400 MS.gene34245:CDS 50.0%
! AGCAGTGCAAGCAGCTTGTT+AGG + chr8.4:47230921-47230940 MS.gene34245:CDS 50.0%
! CACCTTTTCCCTTGAGACTG+GGG - chr8.4:47230015-47230034 None:intergenic 50.0%
! CATCAATCAAGGCACCCTGA+TGG - chr8.4:47229800-47229819 None:intergenic 50.0%
! CATCAGGGTGCCTTGATTGA+TGG + chr8.4:47229798-47229817 MS.gene34245:intron 50.0%
! CGAAGCGAGATTTGGAATCG+GGG - chr8.4:47227974-47227993 None:intergenic 50.0%
! GCTTGAGCAAAGGTGTAGTG+AGG + chr8.4:47229547-47229566 MS.gene34245:CDS 50.0%
! TCCATCAGATTGGCCACCAA+CGG - chr8.4:47228066-47228085 None:intergenic 50.0%
! TGTTTTTCCCCACTGCTCAG+GGG - chr8.4:47229838-47229857 None:intergenic 50.0%
!! TGGCTCTAGAAAGAAACCGC+AGG + chr8.4:47230305-47230324 MS.gene34245:CDS 50.0%
!!! GTTGTTTTTCCCCACTGCTC+AGG - chr8.4:47229840-47229859 None:intergenic 50.0%
ACAGGATCACCTGGCTGATC+AGG - chr8.4:47231235-47231254 None:intergenic 55.0%
ACCTGGCTGATCAGGAGATG+GGG - chr8.4:47231227-47231246 None:intergenic 55.0%
AGATCCTTCCCCTGAGCAGT+GGG + chr8.4:47229827-47229846 MS.gene34245:CDS 55.0%
ATGGAGGGGCTGCATTTGAG+AGG + chr8.4:47229946-47229965 MS.gene34245:CDS 55.0%
CAACGAGGTTCAAGAGCGGA+GGG - chr8.4:47228188-47228207 None:intergenic 55.0%
CACCTGGCTGATCAGGAGAT+GGG - chr8.4:47231228-47231247 None:intergenic 55.0%
CCACATGAGAGATCTGCCTG+CGG - chr8.4:47229373-47229392 None:intergenic 55.0%
CTTGGAGTGTGCTCCTCTCA+AGG + chr8.4:47229093-47229112 MS.gene34245:intron 55.0%
CTTTCTTGACCGGGTGGATG+TGG - chr8.4:47227949-47227968 None:intergenic 55.0%
GAGCGGTCTCAAAGTGGCAT+TGG + chr8.4:47229867-47229886 MS.gene34245:CDS 55.0%
GATCAGGAGATGGGGTCTCA+GGG - chr8.4:47231219-47231238 None:intergenic 55.0%
GATCTCTCATGTGGACTCGG+AGG + chr8.4:47229379-47229398 MS.gene34245:CDS 55.0%
GCACTGGAGGAAACAACACC+AGG + chr8.4:47231145-47231164 MS.gene34245:CDS 55.0%
GCAGACCTGTGAGTATGGAC+TGG - chr8.4:47230966-47230985 None:intergenic 55.0%
GGATGTGGATGGGGTCTTTG+TGG - chr8.4:47227934-47227953 None:intergenic 55.0%
GGGTCTCAGGGATAGTCATC+TGG - chr8.4:47231207-47231226 None:intergenic 55.0%
GTAGGCGAAGAAGGGTGAAC+CGG + chr8.4:47228649-47228668 MS.gene34245:intron 55.0%
TCACCTGGCTGATCAGGAGA+TGG - chr8.4:47231229-47231248 None:intergenic 55.0%
TGAATGCCCCCCAGTCTCAA+GGG + chr8.4:47230004-47230023 MS.gene34245:CDS 55.0%
TGATCAGGAGATGGGGTCTC+AGG - chr8.4:47231220-47231239 None:intergenic 55.0%
TGGAGGGGCTGCATTTGAGA+GGG + chr8.4:47229947-47229966 MS.gene34245:CDS 55.0%
TGGGGGAAGAGGACTAACAG+AGG + chr8.4:47230180-47230199 MS.gene34245:CDS 55.0%
TTAGTCCTCTTCCCCCACCT+CGG - chr8.4:47230177-47230196 None:intergenic 55.0%
TTGAATGCCCCCCAGTCTCA+AGG + chr8.4:47230003-47230022 MS.gene34245:CDS 55.0%
TTGACCGGGTGGATGTGGAT+GGG - chr8.4:47227944-47227963 None:intergenic 55.0%
TTTACCTGGAAGCGGCAACG+AGG - chr8.4:47228203-47228222 None:intergenic 55.0%
! AAGGGCGAGTGTTGTCTCCA+AGG - chr8.4:47229301-47229320 None:intergenic 55.0%
! AGACGAAGAGTGGCATTGGG+GGG - chr8.4:47229924-47229943 None:intergenic 55.0%
! AGTGGCATTGGGATTTGGCC+TGG + chr8.4:47229879-47229898 MS.gene34245:CDS 55.0%
! ATCGCCTTGTTGTGGCTCTC+GGG + chr8.4:47232139-47232158 MS.gene34245:CDS 55.0%
! ATCGGGGTGCTTTCTTGACC+GGG - chr8.4:47227958-47227977 None:intergenic 55.0%
! CACACCGGGGTTTGTTCTCA+AGG + chr8.4:47228540-47228559 MS.gene34245:CDS 55.0%
! CACGTGCTGCTGCTAGATCA+TGG + chr8.4:47230218-47230237 MS.gene34245:CDS 55.0%
! CATCTTCGCGACGGTGTCAA+GGG + chr8.4:47229410-47229429 MS.gene34245:CDS 55.0%
! CCTTTTCCCTTGAGACTGGG+GGG - chr8.4:47230013-47230032 None:intergenic 55.0%
! CTTGAGAGGAGCACACTCCA+AGG - chr8.4:47229095-47229114 None:intergenic 55.0%
! GAAGCGTTTATGCCGGCACA+TGG - chr8.4:47231007-47231026 None:intergenic 55.0%
! GACAGAAGGGTATGCCAGCA+AGG - chr8.4:47230360-47230379 None:intergenic 55.0%
! GATCGCCTTGTTGTGGCTCT+CGG + chr8.4:47232138-47232157 MS.gene34245:CDS 55.0%
! GGAGGGCATAGAAAGGAGCT+TGG + chr8.4:47231259-47231278 MS.gene34245:CDS 55.0%
! GTGGCTCTGCCTAAGGATAG+AGG + chr8.4:47229326-47229345 MS.gene34245:CDS 55.0%
! TCATCTTCGCGACGGTGTCA+AGG + chr8.4:47229409-47229428 MS.gene34245:CDS 55.0%
! TCCCTTCTCGAAGCACTCCT+CGG + chr8.4:47228092-47228111 MS.gene34245:CDS 55.0%
!! AACCGAGGAGTGCTTCGAGA+AGG - chr8.4:47228097-47228116 None:intergenic 55.0%
!! ACCGAGGAGTGCTTCGAGAA+GGG - chr8.4:47228096-47228115 None:intergenic 55.0%
!! CGAACGTGTGCTGCTTTACC+TGG - chr8.4:47231166-47231185 None:intergenic 55.0%
!! TGAGACTGGGGGGCATTCAA+TGG - chr8.4:47230003-47230022 None:intergenic 55.0%
ACCACCAGGCCAACCCAAGT+GGG - chr8.4:47229060-47229079 None:intergenic 60.0%
ACCCCATCTCCTGATCAGCC+AGG + chr8.4:47231223-47231242 MS.gene34245:CDS 60.0%
AGACCCCATCCACATCCACC+CGG + chr8.4:47227937-47227956 MS.gene34245:CDS 60.0%
AGCGCCCCTAAAGCTGGAAC+TGG - chr8.4:47231604-47231623 None:intergenic 60.0%
CAGATCCTTCCCCTGAGCAG+TGG + chr8.4:47229826-47229845 MS.gene34245:CDS 60.0%
CCAACCCGAGAGCCACAACA+AGG - chr8.4:47232146-47232165 None:intergenic 60.0%
CCCCCCAGTCTCAAGGGAAA+AGG + chr8.4:47230010-47230029 MS.gene34245:CDS 60.0%
CCGCAGGCAGATCTCTCATG+TGG + chr8.4:47229370-47229389 MS.gene34245:CDS 60.0%
CGGACAATTGCGGCCAAGTG+AGG - chr8.4:47228951-47228970 None:intergenic 60.0%
CTCACCGAAAGCGACAGCAG+CGG - chr8.4:47228018-47228037 None:intergenic 60.0%
CTTGACCGGGTGGATGTGGA+TGG - chr8.4:47227945-47227964 None:intergenic 60.0%
GAGCCACAACAAGGCGATCG+CGG - chr8.4:47232137-47232156 None:intergenic 60.0%
GATCCTTCCCCTGAGCAGTG+GGG + chr8.4:47229828-47229847 MS.gene34245:CDS 60.0%
GCAACGAGGTTCAAGAGCGG+AGG - chr8.4:47228189-47228208 None:intergenic 60.0%
GCGGCAACGAGGTTCAAGAG+CGG - chr8.4:47228192-47228211 None:intergenic 60.0%
GGATGGGGTCTTTGTGGGAG+TGG - chr8.4:47227928-47227947 None:intergenic 60.0%
GGTCTTTGTGGGAGTGGTGG+TGG - chr8.4:47227922-47227941 None:intergenic 60.0%
TGACCGGGTGGATGTGGATG+GGG - chr8.4:47227943-47227962 None:intergenic 60.0%
TGGGGTCTTTGTGGGAGTGG+TGG - chr8.4:47227925-47227944 None:intergenic 60.0%
TTTCCCCACTGCTCAGGGGA+AGG - chr8.4:47229834-47229853 None:intergenic 60.0%
! CAGGCCAACCCAAGTGGGTT+TGG - chr8.4:47229055-47229074 None:intergenic 60.0%
! CCTTGTTGTGGCTCTCGGGT+TGG + chr8.4:47232143-47232162 MS.gene34245:CDS 60.0%
! GACGAAGAGTGGCATTGGGG+GGG - chr8.4:47229923-47229942 None:intergenic 60.0%
! GGCATTGGGGGGGTTCACAT+CGG - chr8.4:47229913-47229932 None:intergenic 60.0%
! TGAACCTCGTTGCCGCTTCC+AGG + chr8.4:47228196-47228215 MS.gene34245:CDS 60.0%
!! CAAACCCACTTGGGTTGGCC+TGG + chr8.4:47229053-47229072 MS.gene34245:intron 60.0%
!! CAAGCCGCTGCTGTCGCTTT+CGG + chr8.4:47228011-47228030 MS.gene34245:CDS 60.0%
!! GCCGTTGGTGGCCAATCTGA+TGG + chr8.4:47228062-47228081 MS.gene34245:CDS 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr8.4:47229075-47229094 MS.gene34245:intron 60.0%
!! TGGCCTGGTGGTGTTGGCTT+GGG + chr8.4:47229068-47229087 MS.gene34245:intron 60.0%
!! TTGGCCTGGTGGTGTTGGCT+TGG + chr8.4:47229067-47229086 MS.gene34245:intron 60.0%
!! TTGGGTTGGCCTGGTGGTGT+TGG + chr8.4:47229062-47229081 MS.gene34245:intron 60.0%
CACCACCAGGCCAACCCAAG+TGG - chr8.4:47229061-47229080 None:intergenic 65.0%
CGAAAGCGACAGCAGCGGCT+TGG - chr8.4:47228013-47228032 None:intergenic 65.0%
GGTCCCAAGCCAACACCACC+AGG - chr8.4:47229074-47229093 None:intergenic 65.0%
TTGCCCATGCTGGCCGAGGT+GGG + chr8.4:47230161-47230180 MS.gene34245:CDS 65.0%
TTGCTTGCCCATGCTGGCCG+AGG + chr8.4:47230157-47230176 MS.gene34245:CDS 65.0%
! AAGCGACAGCAGCGGCTTGG+AGG - chr8.4:47228010-47228029 None:intergenic 65.0%
! CAGCCGCGATCGCCTTGTTG+TGG + chr8.4:47232131-47232150 MS.gene34245:intron 65.0%
! CTTCGCGACGGTGTCAAGGG+AGG + chr8.4:47229413-47229432 MS.gene34245:CDS 65.0%
! GGGGTGCTTTCTTGACCGGG+TGG - chr8.4:47227955-47227974 None:intergenic 65.0%
!! ACCCACTTGGGTTGGCCTGG+TGG + chr8.4:47229056-47229075 MS.gene34245:intron 65.0%
CTTGCCCATGCTGGCCGAGG+TGG + chr8.4:47230160-47230179 MS.gene34245:CDS 70.0%
TCCCCCACCTCGGCCAGCAT+GGG - chr8.4:47230167-47230186 None:intergenic 70.0%
TGCCCATGCTGGCCGAGGTG+GGG + chr8.4:47230162-47230181 MS.gene34245:CDS 70.0%
TTCCCCCACCTCGGCCAGCA+TGG - chr8.4:47230168-47230187 None:intergenic 70.0%
! CGACAGCAGCGGCTTGGAGG+CGG - chr8.4:47228007-47228026 None:intergenic 70.0%
GCCCATGCTGGCCGAGGTGG+GGG + chr8.4:47230163-47230182 MS.gene34245:CDS 75.0%
GCTGGCCGAGGTGGGGGAAG+AGG + chr8.4:47230169-47230188 MS.gene34245:CDS 75.0%


Chromosome Type Strat End Strand Name
chr8.4 gene 47227912 47232320 47227912 ID=MS.gene34245
chr8.4 mRNA 47227912 47232320 47227912 ID=MS.gene34245.t1;Parent=MS.gene34245
chr8.4 exon 47227912 47228217 47227912 ID=MS.gene34245.t1.exon1;Parent=MS.gene34245.t1
chr8.4 CDS 47227912 47228217 47227912 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
chr8.4 exon 47228370 47228561 47228370 ID=MS.gene34245.t1.exon2;Parent=MS.gene34245.t1
chr8.4 CDS 47228370 47228561 47228370 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
chr8.4 exon 47228653 47228859 47228653 ID=MS.gene34245.t1.exon3;Parent=MS.gene34245.t1
chr8.4 CDS 47228653 47228859 47228653 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
chr8.4 exon 47229248 47229676 47229248 ID=MS.gene34245.t1.exon4;Parent=MS.gene34245.t1
chr8.4 CDS 47229248 47229676 47229248 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
chr8.4 exon 47229804 47230031 47229804 ID=MS.gene34245.t1.exon5;Parent=MS.gene34245.t1
chr8.4 CDS 47229804 47230031 47229804 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
chr8.4 exon 47230145 47230340 47230145 ID=MS.gene34245.t1.exon6;Parent=MS.gene34245.t1
chr8.4 CDS 47230145 47230340 47230145 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
chr8.4 exon 47230831 47231515 47230831 ID=MS.gene34245.t1.exon7;Parent=MS.gene34245.t1
chr8.4 CDS 47230831 47231515 47230831 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
chr8.4 exon 47232134 47232320 47232134 ID=MS.gene34245.t1.exon8;Parent=MS.gene34245.t1
chr8.4 CDS 47232134 47232320 47232134 ID=cds.MS.gene34245.t1;Parent=MS.gene34245.t1
Gene Sequence

>MS.gene34245

ATGTCATCCACCACCACTCCCACAAAGACCCCATCCACATCCACCCGGTCAAGAAAGCACCCCGATTCCAAATCTCGCTTCGAAGCTTACAACCGCCTCCAAGCCGCTGCTGTCGCTTTCGGTGAGACTCTCCCCATCCCTGAAATTGTTGCCGTTGGTGGCCAATCTGATGGAAAGAGCTCCCTTCTCGAAGCACTCCTCGGTTTTCGCTTCAATGTCCGTGAAGTTGAGATGGGTACTCGCCGCCCTCTTATTCTTCAAATGCTTCACGATCCCTCCGCTCTTGAACCTCGTTGCCGCTTCCAGGTAAATTCATTCATTCTCTCATCCAACACCGTGTCAACGTGTTAGTGTCCGTGTCAGTGCTTCACAAATTCTTATTGGTTTCATTTTGTGTTTGTTAATTCATGTAATTTTGGAAGAATGATTTTGAGTGTTGTGTAAAAAAAACAATACAGGAGGAAGATTCAGAAGAGTATGGAAGTCCGGTGGTTTCGGCATCTACGATTGCTGACATTATAAAGTCTCGAACCGAAGCACTATTGAAGATAACCAAAACAGCAGTTTCTCCTAAGCCAATTGTACTCAAAGCTGAATACGCACACTGTCCAAATCTCACCATTATTGACACACCGGGGTTTGTTCTCAAGGTATTTGTTGTAATGCTTGAATGATAAGTGATTCGACTGATGGTATGTTTAATTGGAAATTTGTGTGAGATCTGATTGTTTTGTATGGTAGGCGAAGAAGGGTGAACCGGAGAACACGCCTGATGAGATTCTTTCCATGGTGAAGACATTGGCTACTCCTCCACACCGTATACTCTTGTTCCTTCAGCAAAGTAGTGTGGAATGGTGCTCCTCTTTGTGGTTGGACTCTATTCGTGAAATTGATCCCACGTTTAGACGGACAATCATTGTTGTCTCCAAATTTGATAATCGTCTCAAGGTACTGTTAATTTTCAAGTTGTCATTTATTAGTATGTTCATACATCACTGTTCTAAATAAACGGGTGCTAGAGAGTCACTAACTGTAGCCTCACTTGGCCGCAATTGTCCGTAATATTAAAGATTGCAATTGCCATGTGACCGTGAATGTTATTGCAACTTTGATTTAAAACCTTGTATAAAATGATACATACCAAACCCACTTGGGTTGGCCTGGTGGTGTTGGCTTGGGACCTTGGAGTGTGCTCCTCTCAAGGTCTCAAGTTTGATTTTCTCCGGTGTCAATTTAGGTAGGCTAGTTTAGCTTATTAAAAAAAAAAGATACATATTATTGTTTTACAGGGTTCAATAATGGTTTTAGTGACGAGTTAGTAATGGGATACATGTAGGAATTTACTGATCGGTGGGAAGTGGATCGCTATTTGAGTGCAAGTGGTTACCTTGGAGACAACACTCGCCCTTTTTTTGTGGCTCTGCCTAAGGATAGAGGCAACATTTCAAATGAAGAGTTCCGCAGGCAGATCTCTCATGTGGACTCGGAGGTTATGCATCATCTTCGCGACGGTGTCAAGGGAGGTTTTGATGAAGAAAAGTTCAAATCCTATATTGGTTTTGGGCGTCTGAGGGATTATTTGGAGTCTGAGCTTCAGAAGAAATACAAAGAAGCTGCTCCATCAACTCTTGCCTTGCTTGAGCAAAGGTGTAGTGAGGTCACTTGTGAACTTTCTGGATTGGATTCAAAAATTGAGGCCACTTCAGACATTTCTCATCTGAGGAAATTCGCAATGCTGTGTGCAGCTTCTATCAGCAACCATGTGGTGGGTAATCATAGTTATTATTGTGACAAAGCAAAATTTATTTTGAACTTGGTCATGAACTGAAGATTATTATGTATATGCAAGCTAATAACTAACTGTTTTACTCTGCAAATGGATGTTCCATCAGGGTGCCTTGATTGATGGTGCAGCAGATCCTTCCCCTGAGCAGTGGGGAAAAACAACAGTAGAAGAGCGGTCTCAAAGTGGCATTGGGATTTGGCCTGGTGTCATCACCGATGTGAACCCCCCCAATGCCACTCTTCGTCTTTATGGAGGGGCTGCATTTGAGAGGGTGATGCATGAATTTCGCTGTGCTGCATATTCCATTGAATGCCCCCCAGTCTCAAGGGAAAAGGTGATATTATTTATGTACTTTTTTCATAAACTCATGATCTGAGGAATGTTTTATCTTCTTTATTCCTTTCATTTCAAATTGAAATTCATTGGTATCTATCATTACTTTAATAGGTTGCAAATATATTGCTTGCCCATGCTGGCCGAGGTGGGGGAAGAGGACTAACAGAGGCTGCTGCAGAGATTGCACGTGCTGCTGCTAGATCATGGCTTGCTCCTCTTCTTGATACTGCATGTGACCGCCTTGCTTTTGTTTTAGGAAGCTTATTTGATTTGGCTCTAGAAAGAAACCGCAGGCATGATTCAGCATGTATGTGAAGCTTCTTCCTTGCTGGCATACCCTTCTGTCTTATTTATGATGTTCTTTTTTCTTCGCTACTTGAATGTTCAATATTTTTTCCTCATGTCTTGGATAACGATAGTCTCATACCCCCTCTCAATGGGGTTTGAGAAATGTAGGAAAGAGAAAGATATTAAGAGAAGAAGAAAGGAAATAAAGTGCCATTTGAACCCTAATTTATTTCCTGTCTATTATGCAATTGAATATTTAATTGTCATTCCAGAAATTAACTTTTCTGTGTTTTGGGAGTACTATTAGTATTAGTTTATTTCATTTCTTCTGGAATTTTTCCCTTTAGATTCTAACTATATTTTGTTTAGTTTGAGATAAAGCATACAATCCCATGTAAGATACTGATAGAGCTGAATGGTGATAATGTGAAATTTTATCTCCTATATTTTGTTTTATTTCTTGCAATTGACTAGAAAAAAAGACTGACTGTTGTTTGTTTTCCATGAAGATGGGATAAAAACGGGAAACATGGATGGCTATGTAGGTTTTCATGCTGCTTTAAGGTGTGCTTACACTCGATTCTTAAAGGATCTTGCTAAGCAGTGCAAGCAGCTTGTTAGGCACCACCTTGATTCAGTTACCAGTCCATACTCACAGGTCTGCTACTTCAATGACTTTCAACCATGTGCCGGCATAAACGCTTCAAGTTTCAACAAATTTCCCCAGGCTTCAGCCTCTTCATTTTTTCTTGAATTGAGTGATACAAATTCTGCTTCTCATGATGTAAGGAGGGATCAAGAAAATATAGCTCCAGAAAAGAATGCACTGGAGGAAACAACACCAGGTAAAGCAGCACACGTTCGAGAGGGTTTGCGAGAAAGCCAGATGACTATCCCTGAGACCCCATCTCCTGATCAGCCAGGTGATCCTGTATATGGAGGGCATAGAAAGGAGCTTGGAATATGCAATGACATGGGGCCAAGAAAGAGAGCGTCTAGAATGACAGGAAATGGCAAAAATTCTGACTATATTAGACTTCAAAATGATTCCATTTTATTTGGAAATGGGGAGAGAACAGGATCAGCATACTCAGAAATCTGTTTATCAGCTGCCCAGCATTTCGCACGTATACGTGAAGTTCTTGTTGAAAGAGGCGTTACATCGACATTAAACTCTGGATTCCTGACTCCTTGGTAAGCTTCTATCTTGTGTAAAATCAACTTATTTATTTTCTGCGATCTTGGATGCTTGAATGTGGCAAGGTACTTAAACAAATTTCCAGTTCCAGCTTTAGGGGCGCTATATTGATAAGTGCAATATTTTCACTTCACAAACACTCAAAAGAAGTTACTTTATGTAGAATGTTCTCGCTTCAGAACTACTAGAACTAATACCTTTCTGTGTCCATATTTATGTCACTTATTTTCAAAAGCATCATACTGTTTCTCATCCATCACCTTCAGTTGCAATTTAACCGGAAGCCTCAAAGTTATTTATTTATTTAATTTAATTTATTTTCTGGTTGATTTAATTTGTTCAACAAGGTTGGTAACTTTTTCCAAATACATAAATACTACTACATATCTGTCAAAAAAATAAATAAATACTACTACATATGCCGGTATTTCATGTTTCTTCATTTGAATTGCTTTTTCTCAATCCTCCCTTAATGATAATGATAGTGCTTTCTTTCATTTGGATACTTCTCTTCAAGCTACTGGATGACATACAGTATTTAATGTGGTCCACGTAAGTATATTCAATAATTCTTCATTCACCATAATACCACCTTGTTGTGCTTGTTTGTGCAGCCGCGATCGCCTTGTTGTGGCTCTCGGGTTGGATTTATTTGCTGTGAACGATGAGAAATTCATGGACATGTTTGTCGCTCCTGGTGCCATAGATGTGCTACAAAATGAACGCGAGTCTCTTATGAAGCGTCAGAAGATACTCCATTCTTGCTTGAATGAGTTCAAAAACGTTGCTCGGTCCCTTTGA
Protein sequence

>MS.gene34245.t1

MSSTTTPTKTPSTSTRSRKHPDSKSRFEAYNRLQAAAVAFGETLPIPEIVAVGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMLHDPSALEPRCRFQEEDSEEYGSPVVSASTIADIIKSRTEALLKITKTAVSPKPIVLKAEYAHCPNLTIIDTPGFVLKAKKGEPENTPDEILSMVKTLATPPHRILLFLQQSSVEWCSSLWLDSIREIDPTFRRTIIVVSKFDNRLKEFTDRWEVDRYLSASGYLGDNTRPFFVALPKDRGNISNEEFRRQISHVDSEVMHHLRDGVKGGFDEEKFKSYIGFGRLRDYLESELQKKYKEAAPSTLALLEQRCSEVTCELSGLDSKIEATSDISHLRKFAMLCAASISNHVGALIDGAADPSPEQWGKTTVEERSQSGIGIWPGVITDVNPPNATLRLYGGAAFERVMHEFRCAAYSIECPPVSREKVANILLAHAGRGGGRGLTEAAAEIARAAARSWLAPLLDTACDRLAFVLGSLFDLALERNRRHDSAYGIKTGNMDGYVGFHAALRCAYTRFLKDLAKQCKQLVRHHLDSVTSPYSQVCYFNDFQPCAGINASSFNKFPQASASSFFLELSDTNSASHDVRRDQENIAPEKNALEETTPGKAAHVREGLRESQMTIPETPSPDQPGDPVYGGHRKELGICNDMGPRKRASRMTGNGKNSDYIRLQNDSILFGNGERTGSAYSEICLSAAQHFARIREVLVERGVTSTLNSGFLTPCRDRLVVALGLDLFAVNDEKFMDMFVAPGAIDVLQNERESLMKRQKILHSCLNEFKNVARSL